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Volumn 86, Issue 4, 2015, Pages 864-880

Combination of Pharmacophore Matching, 2D Similarity Search, and in Vitro Biological Assays in the Selection of Potential 5-HT6 Antagonists from Large Commercial Repositories

Author keywords

biological screening; combinatorial chemistry; drug discovery; G Protein coupled receptor; virtual screening

Indexed keywords

G PROTEIN COUPLED RECEPTOR; LIGAND; SEROTONIN ANTAGONIST; MOLECULAR LIBRARY; SEROTONIN 6 RECEPTOR; SEROTONIN RECEPTOR;

EID: 84942551614     PISSN: 17470277     EISSN: 17470285     Source Type: Journal    
DOI: 10.1111/cbdd.12563     Document Type: Article
Times cited : (7)

References (55)
  • 1
    • 33645880762 scopus 로고    scopus 로고
    • Medicinal chemistry strategies to 5-HT(6) receptor ligands as potential cognitive enhancers and antiobesity agents
    • Holenz J., Pauwels P.J., Díaz J.L., Mercè R., Codony X., Buschmann H., (2006) Medicinal chemistry strategies to 5-HT(6) receptor ligands as potential cognitive enhancers and antiobesity agents. Drug Discov Today; 11: 283-299.
    • (2006) Drug Discov Today , vol.11 , pp. 283-299
    • Holenz, J.1    Pauwels, P.J.2    Díaz, J.L.3    Mercè, R.4    Codony, X.5    Buschmann, H.6
  • 2
    • 38549144692 scopus 로고    scopus 로고
    • Selective 5-HT6 receptor ligands: Progress in the development of a novel pharmacological approach to the treatment of obesity and related metabolic disorders
    • Heal D.J., Smith S.L., Fisas A., Codony X., Buschmann H., (2008) Selective 5-HT6 receptor ligands: progress in the development of a novel pharmacological approach to the treatment of obesity and related metabolic disorders. Pharmacol Ther; 117: 207-231.
    • (2008) Pharmacol Ther , vol.117 , pp. 207-231
    • Heal, D.J.1    Smith, S.L.2    Fisas, A.3    Codony, X.4    Buschmann, H.5
  • 4
    • 13344280365 scopus 로고    scopus 로고
    • Classification and nomenclature of 5-HT receptors: A comment on current issues
    • Hoyer D., Martin G.R., (1996) Classification and nomenclature of 5-HT receptors: a comment on current issues. Behav Brain Res; 73: 263-268.
    • (1996) Behav Brain Res , vol.73 , pp. 263-268
    • Hoyer, D.1    Martin, G.R.2
  • 9
    • 0028670359 scopus 로고
    • 5-HT6 receptors positively coupled to adenylyl cyclase in striatal neurones in culture
    • Sebben M., Ansanay H., Bockaert J., Dumuis A., (1994) 5-HT6 receptors positively coupled to adenylyl cyclase in striatal neurones in culture. NeuroReport; 5: 2553-2557.
    • (1994) NeuroReport , vol.5 , pp. 2553-2557
    • Sebben, M.1    Ansanay, H.2    Bockaert, J.3    Dumuis, A.4
  • 10
    • 34250191571 scopus 로고    scopus 로고
    • Endogenous serotonin excites striatal cholinergic interneurons via the activation of 5-HT 2C, 5-HT6, and 5-HT7 serotonin receptors: Implications for extrapyramidal side effects of serotonin reuptake inhibitors
    • Bonsi P., Cuomo D., Ding J., Sciamanna G., Ulrich S., Tscherter A., Bernardi G., Surmeier D.J., Pisani A., (2007) Endogenous serotonin excites striatal cholinergic interneurons via the activation of 5-HT 2C, 5-HT6, and 5-HT7 serotonin receptors: implications for extrapyramidal side effects of serotonin reuptake inhibitors. Neuropsychopharmacology; 32: 1840-1854.
    • (2007) Neuropsychopharmacology , vol.32 , pp. 1840-1854
    • Bonsi, P.1    Cuomo, D.2    Ding, J.3    Sciamanna, G.4    Ulrich, S.5    Tscherter, A.6    Bernardi, G.7    Surmeier, D.J.8    Pisani, A.9
  • 11
    • 0042023711 scopus 로고    scopus 로고
    • Alzheimer disease in the US population: Prevalence estimates using the 2000 census
    • Hebert L.E., Scherr P.A., Bienias J.L., Bennett D.A., Evans D.A., (2003) Alzheimer disease in the US population: prevalence estimates using the 2000 census. Arch Neurol; 60: 1119-1122.
    • (2003) Arch Neurol , vol.60 , pp. 1119-1122
    • Hebert, L.E.1    Scherr, P.A.2    Bienias, J.L.3    Bennett, D.A.4    Evans, D.A.5
  • 12
    • 33745893779 scopus 로고    scopus 로고
    • Alzheimer disease: Progress or profit?
    • Mount C., Downton C., (2006) Alzheimer disease: progress or profit? Nat Med; 12: 780-784.
    • (2006) Nat Med , vol.12 , pp. 780-784
    • Mount, C.1    Downton, C.2
  • 14
    • 84920128903 scopus 로고    scopus 로고
    • Serotonin 5-HT6 receptor antagonists for the treatment of cognitive deficiency in Alzheimer's disease
    • Benhamú B., Martín-Fontecha M., Vázquez-Villa H., Pardo L., Lõpez-Rodríguez M.L., (2014) Serotonin 5-HT6 receptor antagonists for the treatment of cognitive deficiency in Alzheimer's disease. J Med Chem; 57: 7160-7181.
    • (2014) J Med Chem , vol.57 , pp. 7160-7181
    • Benhamú, B.1    Martín-Fontecha, M.2    Vázquez-Villa, H.3    Pardo, L.4    Lõpez-Rodríguez, M.L.5
  • 15
    • 0842308152 scopus 로고    scopus 로고
    • Differential involvement of 5-HT(1B/1D) and 5-HT6 receptors in cognitive and non-cognitive symptoms in Alzheimer's disease
    • Garcia-Alloza M., Hirst W.D., Chen C.P.L., Lasheras B., Francis P.T., Ramírez M.J., (2004) Differential involvement of 5-HT(1B/1D) and 5-HT6 receptors in cognitive and non-cognitive symptoms in Alzheimer's disease. Neuropsychopharmacology; 29: 410-416.
    • (2004) Neuropsychopharmacology , vol.29 , pp. 410-416
    • Garcia-Alloza, M.1    Hirst, W.D.2    Chen, C.P.L.3    Lasheras, B.4    Francis, P.T.5    Ramírez, M.J.6
  • 16
    • 64249139764 scopus 로고    scopus 로고
    • 5-HT6 antagonists as potential treatment for cognitive dysfunction
    • Liu K.G., Robichaud A.J., (2009) 5-HT6 antagonists as potential treatment for cognitive dysfunction. Drug Dev Res; 70: 145-168.
    • (2009) Drug Dev Res , vol.70 , pp. 145-168
    • Liu, K.G.1    Robichaud, A.J.2
  • 17
    • 1642357706 scopus 로고    scopus 로고
    • The many roles of computation in drug discovery
    • Jorgensen W.L., (2004) The many roles of computation in drug discovery. Science; 303: 1813-1818.
    • (2004) Science , vol.303 , pp. 1813-1818
    • Jorgensen, W.L.1
  • 18
    • 77954818699 scopus 로고    scopus 로고
    • Pharmacophore modeling and applications in drug discovery: Challenges and recent advances
    • Yang S., (2010) Pharmacophore modeling and applications in drug discovery: challenges and recent advances. Drug Discov Today; 15: 444-450.
    • (2010) Drug Discov Today , vol.15 , pp. 444-450
    • Yang, S.1
  • 19
    • 79952117000 scopus 로고    scopus 로고
    • Pharmacophore-based virtual screening
    • Horvath D., (2011) Pharmacophore-based virtual screening. Methods Mol Biol; 672: 261-298.
    • (2011) Methods Mol Biol , vol.672 , pp. 261-298
    • Horvath, D.1
  • 21
    • 84870443681 scopus 로고    scopus 로고
    • Virtual screening methods as tools for drug lead discovery from large chemical libraries
    • Ma X.H., Zhu F., Liu X., Shi Z., Zhang J.X., Yang S.Y., Wei Y.Q., Chen Y.Z., (2012) Virtual screening methods as tools for drug lead discovery from large chemical libraries. Curr Med Chem; 19: 5562-5571.
    • (2012) Curr Med Chem , vol.19 , pp. 5562-5571
    • Ma, X.H.1    Zhu, F.2    Liu, X.3    Shi, Z.4    Zhang, J.X.5    Yang, S.Y.6    Wei, Y.Q.7    Chen, Y.Z.8
  • 23
    • 80054916367 scopus 로고    scopus 로고
    • Integration of virtual and high throughput screening in lead discovery settings
    • Polgár T., Keseru G.M., (2011) Integration of virtual and high throughput screening in lead discovery settings. Comb Chem High Throughput Screen; 14: 889-897.
    • (2011) Comb Chem High Throughput Screen , vol.14 , pp. 889-897
    • Polgár, T.1    Keseru, G.M.2
  • 24
    • 33751246188 scopus 로고    scopus 로고
    • Similarity-based virtual screening using 2D fingerprints
    • Willett P., (2006) Similarity-based virtual screening using 2D fingerprints. Drug Discov Today; 11: 1046-1053.
    • (2006) Drug Discov Today , vol.11 , pp. 1046-1053
    • Willett, P.1
  • 25
    • 0003641826 scopus 로고
    • Johnson M.A. Maggiora G.M. eds. New York: John Wiley & Sons
    • Johnson M.A., Maggiora G.M., eds. (1990) Concepts and Applications of Molecular Similarity. New York: John Wiley & Sons.
    • (1990) Concepts and Applications of Molecular Similarity
  • 26
    • 71549138352 scopus 로고    scopus 로고
    • Physiochemical property space distribution among human metabolites, drugs and toxins
    • Khanna V., Ranganathan S., (2009) Physiochemical property space distribution among human metabolites, drugs and toxins. BMC Bioinformatics; 10 (Suppl. 15): S10.
    • (2009) BMC Bioinformatics , vol.10 , pp. S10
    • Khanna, V.1    Ranganathan, S.2
  • 27
    • 69249149274 scopus 로고    scopus 로고
    • Drug-like property concepts in pharmaceutical design
    • Di L., Kerns E.H., Carter G.T., (2009) Drug-like property concepts in pharmaceutical design. Curr Pharm Des; 15: 2184-2194.
    • (2009) Curr Pharm des , vol.15 , pp. 2184-2194
    • Di, L.1    Kerns, E.H.2    Carter, G.T.3
  • 28
    • 0035289779 scopus 로고    scopus 로고
    • Experimental and computational approaches to estimate solubility and permeability in drug discovery and development settings
    • Lipinski C.A., Lombardo F., Dominy B.W., Feeney P.J., (2001) Experimental and computational approaches to estimate solubility and permeability in drug discovery and development settings. Adv Drug Deliv Rev; 46: 3-26.
    • (2001) Adv Drug Deliv Rev , vol.46 , pp. 3-26
    • Lipinski, C.A.1    Lombardo, F.2    Dominy, B.W.3    Feeney, P.J.4
  • 29
    • 0037030653 scopus 로고    scopus 로고
    • Molecular properties that influence the oral bioavailability of drug candidates
    • Veber D.F., Johnson S.R., Cheng H., Smith B.R., Ward K.W., Kopple K.D., (2002) Molecular properties that influence the oral bioavailability of drug candidates. J Med Chem; 45: 2615-2623.
    • (2002) J Med Chem , vol.45 , pp. 2615-2623
    • Veber, D.F.1    Johnson, S.R.2    Cheng, H.3    Smith, B.R.4    Ward, K.W.5    Kopple, K.D.6
  • 31
    • 33646715920 scopus 로고    scopus 로고
    • The influence of target family and functional activity on the physicochemical properties of pre-clinical compounds
    • Morphy R., (2006) The influence of target family and functional activity on the physicochemical properties of pre-clinical compounds. J Med Chem; 49: 2969-2978.
    • (2006) J Med Chem , vol.49 , pp. 2969-2978
    • Morphy, R.1
  • 32
    • 84903280909 scopus 로고    scopus 로고
    • Combination of 2D/3D ligand-based similarity search in rapid virtual screening from multimillion compound repositories. Selection and biological evaluation of potential PDE4 and PDE5 inhibitors
    • Dobi K., Hajdú I., Flachner B., Fabõ G., Szaszkõ M., Bognár M., Magyar C., Simon I., Szisz D., Lorincz Z., Cseh S., Dorman Gy, (2014) Combination of 2D/3D ligand-based similarity search in rapid virtual screening from multimillion compound repositories. Selection and biological evaluation of potential PDE4 and PDE5 inhibitors. Molecules; 19: 7008-7039.
    • (2014) Molecules , vol.19 , pp. 7008-7039
    • Dobi, K.1    Hajdú, I.2    Flachner, B.3    Fabõ, G.4    Szaszkõ, M.5    Bognár, M.6    Magyar, C.7    Simon, I.8    Szisz, D.9    Lorincz, Z.10    Cseh, S.11    Dorman, G.12
  • 33
    • 84858706599 scopus 로고    scopus 로고
    • Combining 2D and 3D in silico methods for rapid selection of potential PDE5 inhibitors from multimillion compounds' repositories: Biological evaluation
    • Tömöri T., Hajdú I., Barna L., Lorincz Z., Cseh S., Dormán G., (2012) Combining 2D and 3D in silico methods for rapid selection of potential PDE5 inhibitors from multimillion compounds' repositories: biological evaluation. Mol Divers; 16: 59-72.
    • (2012) Mol Divers , vol.16 , pp. 59-72
    • Tömöri, T.1    Hajdú, I.2    Barna, L.3    Lorincz, Z.4    Cseh, S.5    Dormán, G.6
  • 34
    • 84875150414 scopus 로고    scopus 로고
    • The holistic integration of virtual screening in drug discovery
    • Tanrikulu Y., Krüger B., Proschak E., (2013) The holistic integration of virtual screening in drug discovery. Drug Discov Today; 18: 358-364.
    • (2013) Drug Discov Today , vol.18 , pp. 358-364
    • Tanrikulu, Y.1    Krüger, B.2    Proschak, E.3
  • 35
    • 43049151814 scopus 로고    scopus 로고
    • Identification of novel cannabinoid CB1 receptor antagonists by using virtual screening with a pharmacophore model
    • Wang H., Duffy R.A., Boykow G.C., Chackalamannil S., Madison V.S., (2008) Identification of novel cannabinoid CB1 receptor antagonists by using virtual screening with a pharmacophore model. J Med Chem; 51: 2439-2446.
    • (2008) J Med Chem , vol.51 , pp. 2439-2446
    • Wang, H.1    Duffy, R.A.2    Boykow, G.C.3    Chackalamannil, S.4    Madison, V.S.5
  • 36
    • 85047686702 scopus 로고    scopus 로고
    • Optimization, pharmacophore modeling and 3D-QSAR studies of sipholanes as breast cancer migration and proliferation inhibitors
    • Foudah A.I., Sallam A.A., Akl M.R., El Sayed K.A., (2014) Optimization, pharmacophore modeling and 3D-QSAR studies of sipholanes as breast cancer migration and proliferation inhibitors. Eur J Med Chem; 73: 310-324.
    • (2014) Eur J Med Chem , vol.73 , pp. 310-324
    • Foudah, A.I.1    Sallam, A.A.2    Akl, M.R.3    El Sayed, K.A.4
  • 37
    • 84893742491 scopus 로고    scopus 로고
    • Rapid in silico selection of an MCHR1 antagonists' focused library from multi-million compounds' repositories: Biological evaluation
    • Flachner B., Tömöri T., Hajdú I., Dobi K., Lorincz Z., Cseh S., Dormán G., (2013) Rapid in silico selection of an MCHR1 antagonists' focused library from multi-million compounds' repositories: biological evaluation. Med Chem Res; 23: 1234-1247.
    • (2013) Med Chem Res , vol.23 , pp. 1234-1247
    • Flachner, B.1    Tömöri, T.2    Hajdú, I.3    Dobi, K.4    Lorincz, Z.5    Cseh, S.6    Dormán, G.7
  • 38
    • 34548150135 scopus 로고    scopus 로고
    • Comparison of 2D fingerprint methods for multiple-template similarity searching on compound activity classes of increasing structural diversity
    • Tovar A., Eckert H., Bajorath J., (2007) Comparison of 2D fingerprint methods for multiple-template similarity searching on compound activity classes of increasing structural diversity. ChemMedChem; 2: 208-217.
    • (2007) ChemMedChem , vol.2 , pp. 208-217
    • Tovar, A.1    Eckert, H.2    Bajorath, J.3
  • 39
    • 0022620276 scopus 로고
    • A comparison of some measures for the determination of inter-molecular structural similarity measures of inter-molecular structural similarity
    • Willett P., Winterman V., (1986) A comparison of some measures for the determination of inter-molecular structural similarity measures of inter-molecular structural similarity. Quant Struct-Act Rel; 5: 18-25.
    • (1986) Quant Struct-Act Rel , vol.5 , pp. 18-25
    • Willett, P.1    Winterman, V.2
  • 40
    • 33846020557 scopus 로고    scopus 로고
    • Similarity metrics and descriptor spaces - Which combinations to choose?
    • Adams S., Glen R., (2006) Similarity metrics and descriptor spaces-which combinations to choose? QSAR Comb Sci; 25: 1133-1142.
    • (2006) QSAR Comb Sci , vol.25 , pp. 1133-1142
    • Adams, S.1    Glen, R.2
  • 41
    • 0033615007 scopus 로고    scopus 로고
    • The hidden component of size in two-dimensional fragment descriptors: Side effects on sampling in bioactive libraries
    • Dixon S.L., Koehler R.T., (1999) The hidden component of size in two-dimensional fragment descriptors: side effects on sampling in bioactive libraries. J Med Chem; 42: 2887-2900.
    • (1999) J Med Chem , vol.42 , pp. 2887-2900
    • Dixon, S.L.1    Koehler, R.T.2
  • 42
    • 53049108466 scopus 로고    scopus 로고
    • Recent advances on the 5-HT5A, 5-HT6 and 5-HT7 receptors
    • Brock T.S., Pascal B., Nicholas I.C., (2008) Recent advances on the 5-HT5A, 5-HT6 and 5-HT7 receptors. Annu Rep Med Chem; 43: 25-42.
    • (2008) Annu Rep Med Chem , vol.43 , pp. 25-42
    • Brock, T.S.1    Pascal, B.2    Nicholas, I.C.3
  • 43
    • 34548742938 scopus 로고    scopus 로고
    • 5-hydroxytryptamine (5-HT) receptor ligands
    • Kitson S.L., (2007) 5-hydroxytryptamine (5-HT) receptor ligands. Curr Pharm Des; 13: 2621-2637.
    • (2007) Curr Pharm des , vol.13 , pp. 2621-2637
    • Kitson, S.L.1
  • 44
    • 0027521351 scopus 로고
    • Aequorin-expressing mammalian cell lines used to report Ca2+ mobilization
    • Button D., Brownstein M., (1993) Aequorin-expressing mammalian cell lines used to report Ca2+ mobilization. Cell Calcium; 14: 663-671.
    • (1993) Cell Calcium , vol.14 , pp. 663-671
    • Button, D.1    Brownstein, M.2
  • 46
    • 33749506582 scopus 로고    scopus 로고
    • Pharmacophore models for metabotropic 5-HT receptor ligands
    • Bojarski A.J., (2006) Pharmacophore models for metabotropic 5-HT receptor ligands. Curr Top Med Chem; 6: 2005-2026.
    • (2006) Curr Top Med Chem , vol.6 , pp. 2005-2026
    • Bojarski, A.J.1
  • 47
  • 48
    • 82555185519 scopus 로고    scopus 로고
    • Synthesis and structure-activity relationship (SAR) of (5,7-disubstituted 3-phenylsulfonyl-pyrazolo[1,5-a]pyrimidin-2-yl)-methylamines as potent serotonin 5-HT(6) receptor (5-HT(6)R) antagonists
    • Ivachtchenko A.V., Golovina E.S., Kadieva M.G., Kysil V.M., Mitkin O.D., Tkachenko S.E., Okun I.M., (2011) Synthesis and structure-activity relationship (SAR) of (5,7-disubstituted 3-phenylsulfonyl-pyrazolo[1,5-a]pyrimidin-2-yl)-methylamines as potent serotonin 5-HT(6) receptor (5-HT(6)R) antagonists. J Med Chem; 54: 8161-8173.
    • (2011) J Med Chem , vol.54 , pp. 8161-8173
    • Ivachtchenko, A.V.1    Golovina, E.S.2    Kadieva, M.G.3    Kysil, V.M.4    Mitkin, O.D.5    Tkachenko, S.E.6    Okun, I.M.7
  • 49
    • 0028901688 scopus 로고
    • Transfected aequorin in the measurement of cytosolic Ca2+ concentration ([Ca2+]c). A critical evaluation
    • Brini M., Marsault R., Bastianutto C., Alvarez J., Pozzan T., Rizzuto R., (1995) Transfected aequorin in the measurement of cytosolic Ca2+ concentration ([Ca2+]c). A critical evaluation. J Biol Chem; 270: 9896-9903.
    • (1995) J Biol Chem , vol.270 , pp. 9896-9903
    • Brini, M.1    Marsault, R.2    Bastianutto, C.3    Alvarez, J.4    Pozzan, T.5    Rizzuto, R.6
  • 52
    • 0034618154 scopus 로고    scopus 로고
    • 6-Bicyclopiperazinyl-1-arylsulfonylindoles and 6-bicyclopiperidinyl-1-arylsulfonylindoles derivatives as novel, potent, and selective 5-HT6 receptor antagonists
    • Isaac M., Slassi A., Xin T., MacLean N., Wilson J., McCallum K., Wang H., Demchyshyn L., (2000) 6-Bicyclopiperazinyl-1-arylsulfonylindoles and 6-bicyclopiperidinyl-1-arylsulfonylindoles derivatives as novel, potent, and selective 5-HT6 receptor antagonists. Bioorg Med Chem Lett; 10: 1719-1721.
    • (2000) Bioorg Med Chem Lett , vol.10 , pp. 1719-1721
    • Isaac, M.1    Slassi, A.2    Xin, T.3    MacLean, N.4    Wilson, J.5    McCallum, K.6    Wang, H.7    Demchyshyn, L.8
  • 53
    • 33845868822 scopus 로고    scopus 로고
    • PHASE: A new engine for pharmacophore perception, 3D QSAR model development, and 3D database screening: 1. Methodology and preliminary results
    • Dixon S.L., Smondyrev A.M., Knoll E.H., Rao S.N., Shaw D.E., Friesner R.A., (2006) PHASE: a new engine for pharmacophore perception, 3D QSAR model development, and 3D database screening: 1. Methodology and preliminary results. J Comput Aided Mol Des; 20: 647-671.
    • (2006) J Comput Aided Mol des , vol.20 , pp. 647-671
    • Dixon, S.L.1    Smondyrev, A.M.2    Knoll, E.H.3    Rao, S.N.4    Shaw, D.E.5    Friesner, R.A.6
  • 54
    • 34447548576 scopus 로고    scopus 로고
    • Ligand efficiency indices for effective drug discovery
    • Abad-Zapatero C., (2007) Ligand efficiency indices for effective drug discovery. Expert Opin Drug Discov; 2: 469-488.
    • (2007) Expert Opin Drug Discov , vol.2 , pp. 469-488
    • Abad-Zapatero, C.1


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