Defining bacterial regulons using ChIP-seq

Methods

Volumn 86, Issue , 2015, Pages 80-88

  Myers, Kevin S ^a   Park, Dan M ^b   Beauchene, Nicole A ^c   Kiley, Patricia J ^a,c  

^a UNIVERSITY OF WISCONSIN MADISON   (United States)

^b LAWRENCE LIVERMORE NATIONAL LABORATORY   (United States)

^c UNIVERSITY OF WISCONSIN SCHOOL OF MEDICINE AND PUBLIC HEALTH   (United States)

Author keywords

Bacterial regulons; Bioinformatics analysis of genomic data; ChIP seq; Genome wide analysis; Systems biology; Transcription factor binding sites; Transcriptional regulation

Indexed keywords

DEOXYRIBONUCLEOPROTEIN; DNA; GENOMIC DNA; TRANSCRIPTION FACTOR; DNA BINDING PROTEIN;

ANTIBODY SPECIFICITY; BACTERIAL GROWTH; BINDING SITE; BIOINFORMATICS; CHROMATIN IMMUNOPRECIPITATION; CONTROLLED STUDY; DNA BINDING; DNA SEQUENCE; GENE EXPRESSION; GENE REGULATORY NETWORK; GENE SEQUENCE; GENETIC ALGORITHM; GENETIC VARIABILITY; HIGH THROUGHPUT SEQUENCING; IN VIVO STUDY; NONHUMAN; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN MOTIF; REGULON; REVIEW; TRANSCRIPTION REGULATION; BACTERIUM; BIOLOGY; CHEMISTRY; DNA MICROARRAY; GENETICS; MOLECULAR BIOLOGY; PROCEDURES;

BACTERIA; BINDING SITES; COMPUTATIONAL BIOLOGY; DNA-BINDING PROTEINS; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; MOLECULAR BIOLOGY; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; REGULON; SEQUENCE ANALYSIS, DNA;

EID: 84941744413     PISSN: 10462023     EISSN: 10959130     Source Type: Journal    
DOI: 10.1016/j.ymeth.2015.05.022     Document Type: Review

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