DOM Sources, Sinks, Reactivity, and Budgets

Biogeochemistry of Marine Dissolved Organic Matter: Second Edition

Volumn , Issue , 2015, Pages 65-126

  Carlson, Craig A ^a   Hansell, Dennis A ^b  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b UNIVERSITY OF MIAMI   (United States)

Author keywords

Biological pump; DOC export; DOM bioavailability; Microbial food web; Ocean carbon cycle; Priming

Indexed keywords

BIOGEOCHEMISTRY; BUDGET CONTROL; CARBON; ECOLOGY; OCEANOGRAPHY; SUBSTRATES;

BIOLOGICAL PUMPS; DOC EXPORT; DOM BIOAVAILABILITY; MICROBIAL FOOD WEB; OCEAN CARBON CYCLE; PRIMING;

PROCESS CONTROL;

EID: 84939435071     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1016/B978-0-12-405940-5.00003-0     Document Type: Chapter

References (491)

1. Abell J., Emerson S., Renaud P. Distribution of TOP, TON, TOC in the North Pacific subtropical gyre: implications for nutrient supply in the surface ocean and remineralization in the upper thermocline. J. Mar. Res. 2000, 58:203-222.
2. Aitkenhead J., McDowell W. Soil C:N ratio as a predictor of annual riverine DOC flux at local and global scales. Global Biogeochem. Cycles 2000, 14:127-138.
3. Alldredge A. The carbon, nitrogen and mass content of marine snow as a function of aggregate size. Deep-Sea Res. I 1998, 45:529-541.
4. Alldredge A.L., Gotschalk C.C. The relative contribution of marine snow of different origins to biological processes in coastal waters. Cont. Shelf Res. 1990, 10:41-58.
5. Alldredge A.L., Silver M.W. Characteristics, dynamics and significance of marine snow. Prog. Oceanogr. 1988, 20:41-82.
6. Alling V., Humborg C., Mörth C.-M., Rahm L., Pollehne F. Tracing terrestrial organic matter by dS and dC signatures in a subarctic estuary. Limnol. Oceanogr. 2008, 53:2594-2602.
7. Alonso-Sáez L., Vázquez-Domínguez E., Cardelús C., Pinhassi J., Sala M.M., Lekunberri I., et al. Factors controlling the year-round variability in carbon flux through bacteria in a coastal marine system. Ecosystems 2008, 11:397-409.
8. Alonso-Sáez L., Sánchez O., Gasol J.M. Bacterial uptake of low molecular weight organics in the subtropical Atlantic: are major phylogenetic groups functionally different?. Limnol. Oceanogr. 2012, 57:798.
9. Aluwihare L.I., Repeta D.J. A comparison of the chemical characteristics of oceanic DOM and extracellular DOM produced by marine algae. Mar. Ecol. Prog. Ser. 1999, 186:105-117.
10. Aluwihare L.I., Repeta D.J., Chen R.F. A major biopolymeric component to dissolved organic carbon in surface sea water. Nature 1997, 387:166-169.
11. Aluwihare L.I., Repeta D.J., Chen R.F. Chemical composition and cycling of dissolved organic matter in the Mid-Atlantic Bight. Deep-Sea Res. II 2002, 49:4421-4437.
12. Aluwihare L., Repeta D.J., Pantoja S., Johnson C.G. Two chemically distinct pools of organic nitrogen accumulate in the ocean. Science 2005, 308:1007-1010.
13. Amon R.M.W., Benner R. Rapid cycling of high-molecular-weight dissolved organic matter in the ocean. Nature 1994, 369:549-552.
14. Amon R.M.W., Benner R. Bacterial utilization of different size classes of dissolved organic matter. Limnol. Oceanogr. 1996, 41:41-51.
15. Amon R.M.W., Benner R. Combined neutral sugars as indicators of the diagenetic state of dissolved organic matter in the Arctic Ocean. Deep-Sea Res. I 2003, 50:151-169.
16. Amon R.M.W., Budus G., Meon B. Dissolved organic carbon distribution an origin in the Nordic Seas: exchanges with the Arctic Ocean and North Atlantic. J. Geophys. Res. 2003, 108:3221-3238.
17. Anderson T.R., Ducklow H.W. Microbial loop carbon cycling in ocean environments studied using a simple steady-state model. Aquat. Microb. Ecol. 2001, 26:37-49.
18. Anderson T.R., Williams P.J.L.B. Modelling the seasonal cycle of dissolved organic carbon at Station E1 in the English Channel. Estuar. Coast. Shelf Sci. 1998, 46:93-109.
19. Anderson T.R., Williams P.J.L. A one-dimensional model of dissolved organic carbon cycling in the water column incorporating combined biological-photochemical decomposition. Global Biogeochem. Cycles 1999, 13:337-349.
20. Apple J.K., Del Giorgio P.A. Organic substrate quality as the link between bacterioplankton carbon demand and growth efficiency in a temperate salt-marsh estuary. ISME J. 2007, 1(8):729-742.
21. Apple J.K., del Giorgio P., Kemp W. Temperature regulation of bacterial production, respiration, and growth efficiency in a temperate salt-marsh estuary. Aquat. Microb. Ecol. 2006, 43:243-254.
22. Arístegui J., Agusti S., Duarte C.M. Respiration in the dark ocean. Geophys. Res. Lett. 2003, 30:1041.
23. Arnosti C. Microbial extracellular enzymes and the marine carbon cycle. Ann. Rev. Mar. Sci. 2011, 3:401-425.
24. Arnosti C., Durkin S., Jeffrey W. Patterns of extracellular enzymatic activities among pelagic microbial communities: implications for cycling of dissolved organic carbon. Aquat. Microb. Ecol. 2005, 38:135-145.
25. Arnosti C., Durkin S., Jeffrey W.H. Patterns of extracellular enzyme activities among pelagic marine microbial communities: implications for cycling of dissolved organic carbon. Aquat. Microb. Ecol. 2005, 38:135-145.
26. Azam F. Microbial control of oceanic carbon flux: the plot thickens. Science 1998, 280:694-696.
27. Azam F., Malfatti F. Microbial structuring of marine ecosystems. Nat. Rev. Microbiol. 2007, 5:782-791.
28. Azam F., Long R.A. Sea snow microcosms. Nature 2001, 414:495-498.
29. Azam F., Fenchel T., Field J.G., Gray J.S., Meyer-Reil L.A., Thingstad F. The ecological role of water-column microbes in the sea. Mar. Ecol. Prog. Ser. 1983, 10:257-263.
30. Baines S.B., Pace M.L. The production of dissolved organic matter by phytoplankton and its importance to bacteria: patterns across marine and freshwater systems. Limnol. Oceanogr. 1991, 36:1078-1090.
31. Baltar F., Reinthaler T., Herndl G.J., Pinhassi J. Major effect of hydrogen peroxide on bacterioplankton metabolism in the Northeast Atlantic. PLoS One 2013, 8:e61051.
32. Barber R.T. Dissolved organic carbon from deep water resists microbial oxidation. Nature 1968, 220:274-275.
33. Bauer J.E. Carbon isotopic compositioin of DOM. Biogeochemistry of Marine Dissolved Organic Matter 2002, 405-453. Academic Press, San Diego. D.A. Hansell, C.A. Carlson (Eds.).
34. 14C activity of dissolved organic carbon fractions in the north-central Pacific and Sargasso Sea. Nature 1992, 357:667-670.
35. Behrenfeld M.J., Falkowski P.G. Photosynthetic rates derived from satellite-based chlorophyll concentration. Limnol. Oceanogr. 1997, 42:1-20.
36. Béjà O., Suzuki M.T. Photoheterotrophic marine prokaryotes. Microbial Ecology of the Oceans, Second ed 2008, 131-157. Wiley-Blackwell, New Jersey. D.L. Kirchman (Ed.).
37. Béjà O., Aravind L., Koonin E.V., Suzuki M.T., Hadd A., Nguyen L.P., et al. Bacterial rhodopsin: evidence for a new type of phototrophy in the sea. Science 2000, 289:1902-1906.
38. Béjà O., Spudich E.N., Spudich J.L., Leclerc M., DeLong E.F. Proteorhodopsin phototrophy in the ocean. Nature 2001, 411:786-789.
39. Benner R.H. Composition and reactivity. Biogeochemistry of Marine Dissolved Organic Matter 2002, 59-90. Academic Press, San Diego. D.A. Hansell, C.A. Carlson (Eds.).
40. Benner R., Biddanda B. Photochemical transformation of surface and deep marine dissolved organic matter: effects on bacterial growth. Limnol. Oceanogr. 1998, 43:1373-1378.
41. Benner R., Herndl G. Bacterially derived dissolved organic matter in the microbial carbon pump. Microbial Carbon Pump in the Ocean 2011, 46-48. Science/AAAS, Washington, DC. N. Jiao, F. Azam, S. Sanders (Eds.).
42. Benner R., Kaiser K. Biological and photochemical transformations of amino acids and lignin phenols in riverine dissolved organic matter. Biogeochemistry 2011, 102:209-222.
43. Benner R., Opsahl S. Molecular indicators of the sources and transformations of dissolved organic matter in the Mississippi river plume. Org. Geochem. 2001, 32:597-611.
44. Benner R., Pakulski J.D., McCarthy M., Hedges J.I., Hatcher P.G. Bulk chemical characteristics of dissolved organic matter in the ocean. Science 1992, 255:1561-1564.
45. Benner R., Louchouarn P., Amon R.M. Terrigenous dissolved organic matter in the Arctic Ocean and its transport to surface and deep waters of the North Atlantic. Global Biogeochem. Cycles 2005, 19. GB2025.
46. Berman T., Kaplan B. Diffusion chamber studies of carbon flux from living algae to heterotrophic bacteria. Hydrobiologia 1984, 108:127-134.
47. Berman-Frank I., Dubinsky Z. Balanced growth in aquatic plants: myth or reality? Phytoplankton use the imbalance between carbon assimilation and biomass production to their strategic advantage. BioScience 1999, 49:29-37.
48. Bianchi T.S. The role of terrestrially derived organic carbon in the coastal ocean: a changing paradigm and the priming effect. Proc. Natl. Acad. Sci. 2011, 108:19473-19481.
49. Biddanda B., Benner R. Carbon, nitrogen and carbohydrate fluxes during the production of particulate and dissolved organic matter by marine phytoplankton. Limnol. Oceanogr. 1997, 42:506-518.
50. Biddanda B., Ogdahl M., Cotner J. Dominance of bacterial metabolism in oligotrophic relative to eutrophic waters. Limnol. Oceanogr. 2001, 46:730-739.
51. Biddanda B., Opsahl S., Benner R. Plankton respiration and carbon flux through bacterioplankton on the Louisiana shelf. Limnol. Oceanogr. 1994, 39:1259-1275.
52. Bidigare R.R. Nitrogen excretion by marine zooplankton. Nitrogen in the Marine Environment 1983, 385-409. Academic Press, New York. E.J. Carpenter, D.G. Capone (Eds.).
53. Billen G., Fontigny A. Dynamics of a Phaeocystis-dominated spring bloom in Belgian coastal waters II. Bacterioplankton dynamics. Mar. Ecol. Prog. Ser. 1987, 37:249-257.
54. Bjørnsen P.K. Bacterioplankton growth yield in continuous seawater cultures. Mar. Ecol. Prog. Ser. 1986, 30:191-196.
55. Bjørnsen P.K. Phytoplankton exudation of organic matter: why do healthy cells do it ?. Linmol. Oceanogr. 1988, 33:151-154.
56. Bonilla-Findji O., Herndl G.J., Gattuso J.-P., Weinbauer M.G. Viral and flagellate control of prokaryotic production and community structure in offshore Mediterranean waters. Appl. Environ. Microbiol. 2009, 75:4801-4812.
57. Borch N.H., Kirchman D.L. Protection of protein from bacterial degradation by submicron particles. Aquat. Microb. Ecol. 1999, 16:265-272.
58. Børsheim K.Y., Vadstein O., Myklestad S.M., Reinertsen H., Kirkvold S., Olsen Y. Photosynthetic algal production, accumulation and release of phytoplankton storage carbohydrates and bacterial production in a gradient in daily nutrient supply. J. Plank. Res. 2005, 27:743-755.
59. Bratbak G., Thingstad T.F. Phytoplankton-bacteria interactions: an apparent paradox? Analysis of a model system with both competition and commensalism. Mar. Ecol. Prog. Ser. 1985, 25:23-30.
60. Bratbak G., Egge J.K., Heldal M. Viral mortality of the marine alga Emiliana huxleyi (Haptophyceae) and termination of algal bloom. Mar. Ecol. Prog. Ser. 1992, 83:273-280.
61. Breitbart M. Marine viruses: truth or dare. Ann. Rev. Mar. Sci. 2012, 4:425-448.
62. Brophy J.E., Carlson D.J. Production of biologically refractory dissolved organic carbon by natural seawater microbial populations. Deep-Sea Res. I 1989, 36:497-507.
63. Brussaard C.P. Viral control of phytoplankton populations-a review. J. Eukaryot. Microbiol. 2005, 51:125-138.
64. Burd A.B., Hansell D.A., Steinberg D.K., Anderson T.R., Arístegui J., Baltar F., et al. Assessing the apparent imbalance between geochemical and biochemical indicators of meso- and bathypelagic biological activity: what the $#! is wrong with present calculations of carbon budgets?. Deep-Sea Res. II 2010, 57:1519-1536.
65. Burdige D.J., Berelson W.M., Coale K.H., McManus J., Johnson K.S. Fluxes of dissolved organic carbon from California continental margin sediments. Geochim. Cosmochim. Acta 1999, 63:1507-1515.
66. Calbet A. Mesozooplankton grazing effect on primary production: a global comparative analysis in marine ecosystems. Limnol. Oceanogr. 2001, 46:1824-1830.
67. Calbet A., Landry M.R. Mesozooplankton influences on the microbial food web: direct and indirect trophic interactions in the oligotrophic open ocean. Limnol. Oceanogr. 1999, 44:1370-1380.
68. Calbet A., Landry M.R. Phytoplankton growth, microzooplankton grazing, and carbon cycling in marine systems. Linmol. Oceanogr. 2004, 49:51-57.
69. Carlson C.A. Production and removal processes. Biogeochemistry of Marine Dissolved Organic Matter 2002, 91-151. Academic Press, San Diego. D.A. Hansell, C.A. Carlson (Eds.).
70. Carlson C.A., Ducklow H.W. Dissolved organic carbon in the upper ocean of the central Equatorial Pacific, 1992: daily and finescale vertical variations. Deep-Sea Res. II 1995, 42:639-656.
71. Carlson C.A., Ducklow H.W. Growth of bacterioplankton and consumption of dissolved organic carbon in the Sargasso Sea. Aquat. Microb. Ecol. 1996, 10:69-85.
72. Carlson C.A., Hansell D.A. The contribution of dissolved organic carbon and nitrogen to biogeochemistry of the Ross Sea. Biogeochemical Cycles in the Ross Sea 2003, 123-142. AGU Press, Washington DC. G. DiTullio, R. Dunbar (Eds.).
73. Carlson D.J., Mayer L.M., Brann M.L., Mague T.H. Binding of monomeric organic compounds to macromolecular dissolved organic matter in seawater. Mar. Chem. 1985, 16:141-153.
74. Carlson C.A., Ducklow H.W., Michaels A.F. Annual flux of dissolved organic carbon from the euphotic zone in the northwestern Sargasso Sea. Nature 1994, 371:405-408.
75. Carlson C.A., Ducklow H.W., Sleeter T.D. Stocks and dynamics of bacterioplankton in the Northwestern Sargasso Sea. Deep-Sea Res. II 1996, 43:491-515.
76. Carlson C.A., Ducklow H.W., Hansell D.A., Smith W.O. Organic carbon partitioning during spring phytoplankton blooms in the Ross Sea Polynya and the Sargasso Sea. Limnol. Oceanogr. 1998, 43:375-386.
77. Carlson C.A., Bates N.R., Ducklow H.W., Hansell D.A. Estimation of bacterial respiration and growth efficiency in the Ross Sea Antarctica. Aquat. Microb. Ecol. 1999, 19:229-244.
78. Carlson C.A., Giovannoni S.J., Hansell D.A., Goldberg S.J., Parsons R., Otero M.P., et al. The effect of nutrient amendments on bacterioplankton growth, DOC utilization, and community structure in the northwestern Sargasso Sea. Aquat. Microb. Ecol. 2002, 30:19-36.
79. Carlson C.A., Giovannoni S.J., Hansell D.A., Goldberg S.J., Parsons R., Vergin K. Interactions among dissolved organic carbon, microbial processes, and community structure in the mesopelagic zone of the northwestern Sargasso Sea. Limnol. Oceanogr. 2004, 49:1073-1083.
80. Carlson C.A., del Giorgio P.A., Herndl G.J. Microbes and the dissipation of energy and respiration: from cells to cosystems. Oceanography 2007, 20:89-100.
81. Carlson C.A., Morris R., Parsons R., Treusch A.H., Giovannoni S.J., Vergin K. Seasonal dynamics of SAR11 populations in the euphotic and mesopelagic zones of the northwestern Sargasso Sea. ISME J. 2009, 3:283-295.
82. Carlson C.A., Hansell D.A., Nelson N.B., Siegel D.A., Smethie W.M., Khatiwala S., et al. Dissolved organic carbon export and subsequent remineralization in the mesopelagic and bathypelagic realms of the North Atlantic basin. Deep-Sea Res. II 2010, 57:1433-1445.
83. Carlson C.A., Hansell D.A., Tamburini C. DOC persistence and its fate after export within the ocean interior. Microbial Carbon Pump in the Ocean 2011, 57-59. Science/AAAS, Washington DC. N. Jiao, F. Azam, S. Sanders (Eds.).
84. Caron D.A. Symbiosis and mixotropy among pelagic microorganisms. Microbial Ecology of the Oceans 2000, 495-523. Wiley-Liss, Inc., New York. D.L. Kirchman (Ed.).
85. Caron D.A., Lim E.L., Miceli G., Waterbury J.B., Valois F.W. Grazing and utilization of chroococcoid cyanobacteria and heterotrophic bacteria by protozoa in laboratory cultures and a coastal plankton community. Mar. Ecol. Prog. Ser. 1991, 76:205-217.
86. Chavez F.P., Messié M., Pennington J.T. Marine Primary production in relation to climate variability and change. Ann. Rev. Mar. Sci. 2011, 3:227-260.
87. Cherrier J., Bauer J.E. Bacterial utilization of transient plankton-derived dissolved organic carbon and nitrogen inputs in surface ocean waters. Aquat. Microb. Ecol. 2004, 35:229-241.
88. Cherrier J., Bauer J.E., Druffel E.R.M. Utilization and turnover of labile dissolved organic matter by bacterial heterotrophs in eastern North Pacific surface waters. Mar. Ecol. Prog. Ser. 1996, 139:267-279.
89. Cherrier J., Bauer J.E., Druffel E.R.M., Coffin R.B., Chanton J.P. Radiocarbon in marine bacteria: evidence for the ages of assimilated carbon. Limnol. Oceanogr. 1999, 44:730-736.
90. Chin W.-C., Orellana M.V., Verdugo P. Spontaneous assembly of marine dissolved organic matter into polymer gels. Nature 1998, 391:568-572.
91. Chisholm S.W. Phytoplankton size. Primary Productivity and Biogeochemical Cycles in the Sea 1992, 213-237. Springer US, New York.
92. Cho B.C., Azam F. Major role of bacteria in biogeochemical fluxes in the ocean's interior. Nature 1988, 332:441-443.
93. Cho J.C., Vergin K.L., Morris R.M., Giovannoni S.J. Lentisphaera araneosa gen. nov., sp. nov, a transparent exopolymer producing marine bacterium, and the description of a novel bacterial phylum Lentisphaerae. Environ. Microbiol. 2004, 6:611-621.
94. Christian J.R., Karl D.M. Bacterial ectoenzymes in marine waters: activity ratios and temperature responses in three oceanographic provinces. Limnol. Oceanogr. 1995, 40:1042-1049.
95. Church M.J. Resource control of bacterial dynamics in the sea. Microbial Ecology of the Oceans 2008, 335-382. Wiley-Liss, New York. second ed. D.L. Kirchman (Ed.).
96. Church M.J., Hutchins D.A., Ducklow H.W. Limitation of bacterial growth by dissolved organic matter and iron in the Southern Ocean. Appl. Environ. Microbiol. 2000, 66:455-466.
97. Church M.J., Ducklow H.W., Karl D.M. Multiyear increases in dissolved organic matter inventories at station ALOHA in the North Pacific Subtropical Gyre. Limnol. Oceanogr. 2002, 47:1-10.
98. Church M.J., DeLong E.F., Ducklow H.W., Karner M.B., Preston C.M., Karl D.M. Abundance and distribution of planktonic Archaea and Bacteria in the waters west of the Antarctic Peninsula. Limnol. Oceanogr. 2003, 48:1893-1902.
99. Church M.J., Ducklow H.W., Karl D.M. Light dependence of [3H] leucine incorporation in the oligotrophic North Pacific Ocean. Appl. Environ. Microbiol. 2004, 70:4079-4087.
100. Coffin R.B., Connolly J.P., Harris P.S. Availability of dissolved organic carbon to bacterioplankton examined by oxygen utilization. Mar. Ecol. Prog. Ser. 1993, 101:9-22.
101. Cole J.J., Finlay S., Pace M.L. Bacterial production in fresh and saltwater ecosystems: a cross-system overview. Mar. Ecol. Prog. Ser. 1988, 43:1-10.
102. Conan P., Sondergaard M., Kragh T., Thingstad F., Pujo-Pay M., Williams P.J.L.B., et al. Partitioning of organic production in marine plankton communities: the effects of inorganic nutrient ratios and community composition on new dissolved organic matter. Limnol. Oceanogr. 2007, 52:753-765.
103. Condon R.H., Steinberg D.K., Bronk D.A. Production of dissolved organic matter and inorganic nutrients by gelatinous zooplankton in the York River estuary, Chesapeake Bay. J. Plank. Res. 2010, 32:153-170.
104. Condon R.H., Steinberg D.K., del Giorgio P.A., Bouvier T.C., Bronk D.A., Graham W.M., et al. Jellyfish blooms result in a major microbial respiratory sink of carbon in marine systems. Proc. Natl. Acad. Sci. U. S. A. 2011, 108:10225-10230.
105. Copin-Montgut G., Avril B. Vertical distribution and temporal variation of dissolved organic carbon in the North-Western Mediterranean Sea. Deep-Sea Res. 1993, 40:1963-1972.
106. Copping A.E., Lorenzen C.J. Carbon budget of marine phytoplankton-herbivore system with carbon-14 as tracer. Limnol. Oceanogr. 1980, 25:873-882.
107. Cory R.M., McNeill K., Cotner J.P., Amado A., Purcell J.M., Marshall A.G. Singlet oxygen in the coupled photochemical and biochemical oxidation of dissolved organic matter. Environ. Sci. Technol. 2010, 44:3683-3689.
108. Cotner J.B., Ammerman J.W., Peele E.R., Bentzen E. Phosphorus-limited bacterioplankton growth in the Sargasso Sea. Aquat. Microb. Ecol. 1997, 13:141-149.
109. Cottrell M.T., Kirchman D.L. Natural assemblages of marine proteobacteria and members of the Cytophaga-Flovobacter cluster consuming low and high molecular weight dissolved organic matter. Appl. Environ. Microbiol. 2000, 66:1692-1697.
110. Countway P.D., Caron D.A. Abundance and distribution of Ostreococcus sp. in the San Pedro Channel, California, as revealed by quantitative PCR. Appl. Environ. Microbiol. 2006, 72:2496-2506.
111. Cowie G.L., Hedges J.I. Biochemical indicators of diagenetic alteration in natural organic matter mixtures. Nature 1994, 369:304-307.
112. Cushing D. A difference in structure between ecosystems in strongly stratified waters and in those that are only weakly stratified. J. Plank. Res. 1989, 11:1-13.
113. Dauwe B., Middelburg J., Herman P., Heip C. Linking diagenetic alterations of amino acids and bulk organic matter reactivity. Limnol. Oceanogr. 1999, 43:1809-1814.
114. Davis J., Benner R. Quantitative estimates of labile and semi-labile dissolved organic carbon in the western Arctic Ocean: a molecular approach. Limnol. Oceanogr. 2007, 52:2434-2444.
115. Davis J., Kaiser K., Benner R. Amino acid and amino sugar yields and compositions as indicators of dissolved organic matter diagenesis. Org. Geochem. 2009, 40:343-352.
116. de la Torre J.R., Christianson L.M., Beja O., Suzuki M.T., Karl D.M., Heidelberg J., et al. Proteorhodopsin genes are distributed among divergent marine bacterial taxa. Proc. Natl. Acad. Sci. U. S. A. 2003, 100:12830-12835.
117. Decho A.W. Microbial exopolymer secretions in ocean environments: their role(s) in food webs and marine processes. Oceanogr. Mar. Biol. Annu. Rev. 1990, 28:73-153.
118. del Giorgio P.A., Cole J.J. Bacterial energetics and growth efficiency. Microbial Ecology of the Oceans 2000, 289-325. Wiley-Liss, Inc, New York. D.L. Kirchman (Ed.).
119. del Giorgio P.A., Condon R., Bouvier T., Longnecker K., Bouvier C., Sherr E., Gasol J.M. Coherent patterns in bacterial growth, growth efficiency, and leucine metabolism along a northeastern Pacific inshore-offshore transect. Limnol. Oceanogr. 2011, 56:1-16.
120. del Giorgio P., Davis J. Patterns in dissolved organic matter lability and consumption across aquatic ecosystems. Aquatic Ecosystems: Interactivity of Dissolved Organic Matter 2002, 399-424. Academic Press, San Diego, CA.
121. del Giorgio P.A., Williams P.J.L.B. The global significance of respiration in aquatic ecosystems: from single cells to the biosphere. Respiration in Aquatic Ecosystems 2005, 267-303. Oxford, New York. P.A.D. Giorgio, P.J.L.B. Williams (Eds.).
122. del Giorgio P., Cole J.J. Bacterial growth efficiency in natural aquatic systems. Annu. Rev. Ecol. Syst. 1998, 29:503-541.
123. DeLong E.F., Franks D.G., Alldredge A.L. Phylogenetic diversity of aggregate-attached vs. free-living marine bacterial assemblages. Limnol. Oceanogr. 1993, 38:924-934.
124. DeLong E.F., Preston C.M., Mincer T., Rich V., Hallam S.J., Frigaard N.U., et al. Community genomics among stratified microbial assemblages in the ocean's interior. Science 2006, 311:496-503.
125. Dittmar T. The molecular level determination of black carbon in marine dissolved organic matter. Org. Geochem. 2008, 39:396-407.
126. Dittmar T., Kattner G. Recalcitrant dissolved organic matter in the ocean: major contribution of small amphiphilics. Mar. Chem. 2003, 82:115-123.
127. Dittmar T., Paeng J. A heat-induced molecular signature in marine dissolved organic matter. Nat. Geosci. 2009, 2:175-179.
128. Doval M.D., Hansell D.A. Organic carbon and apparent oxygen utilization in the western South Pacific and central Indian Ocean. Mar. Chem. 2000, 68:249-264.
129. Druffel E.R.M., Williams P.M. Identification of deep marine source of particulate organic carbon using bomb 14C. Nature 1990, 347:172-174.
130. Druffel E.R.M., Williams P.M., Robertson K., Griffin S., Jull A.J.T., Donahue D., et al. Radiocarbon in dissolved organic and inorganic carbon from the central north Pacific. Radiocarbon 1989, 31:523-532.
131. Druffel E.R.M., Williams P.M., Bauer J.E., Ertel J.R. Cycling of dissolved and particulate organic matter in the open ocean. J. Geophys. Res. 1992, 97:15,639-15,659.
132. Druffel E.R.M., Bauer J.E., Williams P.M., Griffin S., Wolgast D. Seasonal variability of particulate organic radiocarbon in the northeast Pacific Ocean. J. Geophys. Res. 1996, 101:20543-20552.
133. Druffel E.R.M., Griffin S., Bauer J.E., Wolgast D.M., Wang X.-C. Distribution of particulate organic carbon and radiocarbon in the water column from the upper slope to the abyssal NE Pacific Ocean. Deep-Sea Res. II 1998, 45:667-687.
134. Ducklow H.W. The bacterial component of the oceanic euphotic zone. FEMS Microbiol. Ecol. 1999, 30:1-10.
135. Ducklow H. Bacterial production and biomass in the ocean. Microbial Ecology of the Oceans 2000, 85-120. Wiley-Liss, Inc., New York. D.L. Kirchman (Ed.).
136. Ducklow H.W., Carlson C.A. Oceanic bacterial production. Advances in Microbial Ecology 1992, 113-181. Plenum Press, New York. K.C. Marshall (Ed.).
137. Ducklow H.W., Shiah F. Bacterial production in estuaries. Aquatic Microbiology: An Ecological Approach 1993, 261-288. Blackwell Science, Cambridge, MA. T. Ford (Ed.).
138. Ducklow H.W., Purdie D.A., Williams P.J.L., Davies J.M. Bacterioplankton: a sink for carbon in a coastal marine plankton community. Science 1986, 232:865-867.
139. Ducklow H.W., Carlson C.A., Bates N.R., Knap A.H., Michaels A.F. Dissolved organic carbon as a component of the biological pump in the North Atlantic Ocean. Phil. Trans. R. Soc. A 1995, 348:161-167.
140. Ducklow H.W., Carlson C.A., Church M., Kirchman D.L., Smith D.C., Steward G. The seasonal development of the bacterioplankton bloom in the Ross Sea, Antarctica, 1994-1997. Deep-Sea Res. II 2001, 48:4199-4221.
141. Dunne J.P., Sarmiento J.L., Gnanadesikan A. A synthesis of global particle export from the surface ocean and cycling through the ocean interior and on the seafloor. Global Biogeochem. Cycles 2007, 21. GB4006.
142. Duursma E.K. The production of dissolved organic matter in the sea, as related to the primary gross production of organic matter. Neth. J. Sea Res. 1963, 2:85-94.
143. Eichinger M., Poggiale J.C., Van Wambeke F., Lefevre D., Sempere R. Modelling DOC assimilation and bacterial growth efficiency in biodegradation experiments: a case study in the Northeast Atlantic Ocean. Aquat. Microb. Ecol. 2006, 43:139-151.
144. Elifantz H., Dittell A.I., Cottrell M.T., Kirchman D.L. Dissolved organic matter assimilation by heterotrophic bacterial groups in the western Arctic Ocean. Aquat. Microb. Ecol. 2007, 50:39-49.
145. Engel A., Thoms S., Riebesell U., Rochelle-Newall E., Zondervan I. Polysaccharide aggregation as a potential sink of marine dissolved organic carbon. Nature 2004, 428:929-932.
146. Eppley R.W., Stewart E., Abbott M.R., Owen R.W. Estimating ocean production from satellited-derived chlorophyll: insights from the Eastropac data set. Oceanol. Acta 1987, SP:109-113.
147. Fasham M.J.R., Balino B.M., Bowles M.C., Anderson R., Archer D., Bathmann U., et al. A new vision of ocean biogeochemistry after a decade of the Joint Global Ocean Flux Study (JGOFS). Ambio 2001, 10:4-31.
148. Ferguson R.L., Sunda W.G. Utilization of amino acids by planktonic marine bacteria: importance of clean technique and low substrate additions. Linmol. Oceanogr. 1984, 29:258-274.
149. Field K.G., Gordon D., Wright T., Rapp M., Urbach E., Vergin K., et al. Diversity and depth-specific distribution of SAR 11 cluster rRNA genes from marine planktonic bacteria. Appl. Environ. Microbiol. 1997, 63:63-70.
150. First M.R., Hollibaugh J.T. The model high molecular weight DOC compound, dextran, is ingested by the benthic ciliate Uronema marinum but does not supplement ciliate growth. Aquat. Microb. Ecol. 2009, 57:79.
151. Floodgate G.D. Some environmental aspects of hydrocarbon bacteriology. Aquat. Microb. Ecol. 1995, 9:3-11.
152. Flynn K.J. The importance of the form of the quota curve and control of non-limiting nutrient transport in phytoplankton models. J. Plank. Res. 2008, 30:423-438.
153. Flynn K.J., Stoecker D.K., Mitra A., Raven J.A., Gilbert P.M., Hansen P.J., et al. Misuse of the phytoplankton-zooplankton dichotomy: the need to assign organisms as mixotrophs within plankton functional types. J. Plankton Res. 2013, 35:3-11.
154. Fogg G. The production of extracellular nitrogenous substances by a blue-green alga. Proc. R. Soc. Lond. B 1952, 139:372-397.
155. Fogg G.E. The extracellular products of algae. Oceanogr. Mar. Biol. Annu. Rev. 1966, 4:195-212.
156. Fogg G.E. The ecological significance of extracellular products of phytoplankton. Bot. Mar. 1983, 26:3-14.
157. Fontaine S., Barot S. Size and functional diversity of microbe populations control plant persistence and long-term soil carbon accumulation. Ecol. Lett. 2005, 8:1075-1087.
158. Fontaine S., Mariotti A., Abbadie L. The priming effect of organic matter: a question of microbial competition?. Soil Biol. Biochem. 2003, 35:837-843.
159. Fuhrman J. Close coupling between release and uptake of dissolved free amino acids in seawater studied by an isotope dilution approach. Mar. Ecol. Prog. Ser. 1987, 37:45-52.
160. Fuhrman J.A. Marine viruses and their biogeochemical and ecological effects. Nature 1999, 399:541-548.
161. Fuhrman J.A., Noble R.T. Viruses and protist cause similar bacterial mortality in coastal seawater. Limnol. Oceanogr. 1995, 40:1236-1242.
162. Gärdes A., Ramaye Y., Grossart H.-P., Passow U., Ullrich M.S. Effects of Marinobacter adhaerens HP15 on polymer exudation by Thalassiosira weissflogii at different N:P ratios. Mar. Ecol. Prog. Ser. 2012, 461:1.
163. Giovannoni S. The shape of microbial diversity. Environ. Microbiol. 2005, 7:476.
164. Giovannoni S.J., Stingl U. Molecular diversity and ecology of microbial plankton. Nature 2005, 437:343-348.
165. Giovannoni S.J., Rapp M.S., Vergin K., Adair N. 16S rRNA genes reveal stratified open ocean bacterioplankton populations related to the green non-sulfur bacteria phylum. Proc. Natl. Acad. Sci. U. S. A. 1996, 93:7979-7984.
166. Giovannoni S.J., Bibbs L., Cho J.C., Stapels M.D., Desiderio R., Vergin K.L., et al. Proteorhodopsin in the ubiquitous marine bacterium SAR11. Nature 2005, 438:82-85.
167. Gobler C.J., Hutchins D.A., Fisher N.S., Cosper E.M., Saudo-Wilhelmy S.A. Release and bioavailability of C, N, P, Se and Fe following viral lysis of marine chrysophyte. Limnol. Oceanogr. 1997, 42:1492-1504.
168. Goldberg S., Carlson C., Hansell D., Nelson N., Siegel D. Temporal dynamics of dissolved combined neutral sugars and the quality of dissolved organic matter in the Northwestern Sargasso Sea. Deep-Sea Res. I 2009, 56:672-685.
169. Goldberg S., Carlson C.A., Brock B., Nelson N.B., Siegel D.A. Meridional variability in dissolved organic matter stocks and diagenetic state within the euphotic and mesopelagic zone of the North Atlantic subtropical gyre. Mar. Chem. 2010, 56:9-21.
170. Goldberg S., Carlson C., Brzezinski M., Nelson N., Siegel D. Systematic removal of neutral sugars within dissolved organic matter across ocean basins. Geophys. Res. Lett. 2011, 38. L17606. 10.1029/2011GL048620.
171. Goldman J.C., Dennett M.R. Susceptibility of some marine phytoplankton species to cell breakage during filtration and post-filtration rinsing. J. Exp. Mar. Biol. Ecol. 1985, 86:47-58.
172. Goldman J.C., Dennett M.R. Growth of marine bacteria in batch and continuous culture under carbon and nitrogen limitation. Limnol. Oceanogr. 2000, 45:789-800.
173. Goldman J., Caron D.A., Dennett M.R. Regulation of gross growth efficiency and ammonium regeneration in bacteria by substrate C:N ratio. Linmol. Oceanogr. 1987, 32:1239-1252.
174. Goldman J.C., Hansell D.A., Dennett M.R. Chemical characterization of three large oceanic diatoms: potential impact on water column chemistry. Mar. Ecol. Prog. Ser. 1992, 88:257-270.
175. Gómez-Consarnau L., González J.M., Coll-Lladó M., Gourdon P., Pascher T., Neutze R., Pedrós-Alió C., Pinhassi J. Light stimulates growth of proteorhodopsin-containing marine Flavobacteria. Nature 2007, 445(7124):210-213.
176. Gómez-Consarnau L., Akram N., Lindell K., Pedersen A., Neutze R., Milton D.L., et al. Proteorhodopsin phototrophy promotes survival of marine bacteria during starvation. PLoS Biol. 2010, 8:e1000358.
177. Gonsior M., Peake B.M., Cooper W.T., Podgorski D., D'Andrilli J., Cooper W.J. Photochemically induced changes in dissolved organic matter identified by ultrahigh resolution Fourier transform ion cyclotron resonance mass spectrometry. Environ. Sci. Technol. 2009, 43:698-703.
178. Gordon D., Giovannoni S.J. Detection of stratified microbial populations related to Chlorobium and Fibrobacter species in the Atlantic and Pacific oceans. Appl. Environ. Microbiol. 1996, 62:1171-1177.
179. Grossart H.P., Ploug H. Microbial degradation of organic carbon and nitrogen on diatom aggregates. Limnol. Oceanogr. 2001, 46:267-277.
180. Grossart H.-P., Engel A., Arnosti C., De La Rocha C.L., Murray A.E., Passow U. Microbial dynamics in autotrophic and heterotrophic seawater mesocosms III. Organic matter fluxes. Aquat. Microb. Ecol. 2007, 49:143-156.
181. Gruber D.F., Simjouw J.-P., Seitzinger S.P., Taghon G.L. Dynamics and characterization of refractory dissolved organic matter produced by a pure bacterial culture in an experimental predator-prey system. Appl. Environ. Microbiol. 2006, 72:4184-4191.
182. Guenet B., Danger M., Abbadie L., Lacroix G. Priming effect: bridging the gap between terrestrial and aquatic ecology. Ecology 2010, 91:2850-2861.
183. Guillard R.R.L., Hellebust J.A. Growth and the production of extracellular substances by two strains of Phaeocystis pouchetii. J. Phycol. 1971, 7:330-338.
184. Guillard R.R.L., Wangersky P.J. The production of extracellular carbohydrates by some marine flagellates. Limnol. Oceanogr. 1958, 3:449-454.
185. Halewood E.R., Carlson C.A., Brzezinski M.A., Reed D.C., Goodman J. Annual cycle of organic matter partitioning and its availability to bacteria across the Santa Barbara Channel continental shelf. Aquat. Microb. Ecol. 2012, 67:189-209.
186. Hansell D.A. DOC in the global ocean carbon cycle. Biogeochemistry of Marine Dissolved Organic Matter 2002, 685-716. Academic Press, San Diego. D.A. Hansell, C.A. Carlson (Eds.).
187. Hansell D.A. Recalcitrant dissolved organic carbon fractions. Ann. Rev. Mar. Sci. 2013, 5:421-445.
188. Hansell D.A., Carlson C.A. Deep ocean gradients in dissolved organic carbon concentrations. Nature 1998, 395:263-266.
189. Hansell D.A., Carlson C.A. Net community production of dissolved organic carbon. Global Biogeochem. Cycles 1998, 12:443-453.
190. Hansell D.A., Carlson C.A. Biogeochemistry of total organic carbon and nitrogen in the Sargasso Sea: control by convective overturn. Deep-Sea Res. II 2001, 48:1649-1667.
191. Hansell D.A., Carlson C.A. Localized refractory dissolved organic carbon sinks in the deep ocean. Global Biogeochem. Cycles 2013, 27:705-710.
192. Hansell D.A., Bates N.R., Gundersen K. Mineralization of dissolved organic carbon in the Sargasso Sea. Mar. Chem. 1995, 51:201-212.
193. Hansell D.A., Carlson C.A., Suzuki Y. Dissolved organic carbon export with North Pacific intermediate water formation. Global Biogeochem. Cycles 2002, 16:1007.
194. Hansell D.A., Kadko D., Bates N.R. Degradation of terrigenous dissolved organic carbon in the western Arctic Ocean. Science 2004, 304:858-861.
195. Hansell D.A., Carlson C.A., Repeta D.J., Shlitzer R. Dissolved organic matter in the ocean: a controversy stimulates new insights. Oceanography 2009, 22:202-211.
196. Hansell D.A., Carlson C.A., Schlitzer R. Net removal of major marine dissolved organic carbon fractions in the subsurface ocean. Global Biogeochem. Cycles 2012, 26. GB1016. 10.1029/2011GB004069.
197. Hansman R.L., Griffin S., Watson J.T., Druffel E.R., Ingalls A.E., Pearson A., et al. The radiocarbon signature of microorganisms in the mesopelagic ocean. Proc. Natl. Acad. Sci. U. S. A. 2009, 106:6513-6518.
198. Hansson L., Norrman B. Release of dissolved organic carbon (DOC) by the scyphozoan jellyfish Aurelia aurita and its potential influence on the production of planktic bacteria. Mar. Biol. 1995, 121:527-532.
199. Harvey G.R., Boran D.A., Chesal L.A., Tokar J.M. The structure of marine fulvic and humic acids. Mar. Chem. 1983, 12:119-132.
200. Hedges J.I. Polymerization of humic substances in natural environments. Humic Substances and Their Role in the Environment 1988, 45-48. Wiley, Chichester. F.H. Frimmel, R.F. Christman (Eds.).
201. Hedges J.I., Keil R.G. Sedimentary organic matter preservation: an assessment and speculative synthesis. Mar. Chem. 1995, 49:81-115.
202. Heissenberger A., Herndl G.H. Formation of high molecular weight material by free-living marine bacteria. Mar. Ecol. Prog. Ser. 1994, 111:129.
203. Hellebust J.A. Extracellular products. Bot. Monogr. 1974, 10:838-863.
204. Henson S.A., Sanders R., Madsen E. Global patterns in efficiency of particulate organic carbon export and transfer to the deep ocean. Global Biogeochem. Cycles 2012, 26. GB1028.
205. Herndl G.J., Reinthaler T., Teira E., van Aken H., Veth C., Pernthaler A., et al. Contribution of Archaea to total prokaryotic production in the deep Atlantic Ocean. Appl. Environ. Microbiol. 2005, 71:2303-2309.
206. Herndl G.J., Agogué H., Baltar F., Reinthaler T., Sintes E., Varela M.M. Regulation of aquatic microbial processes: the'microbial loop'of the sunlit surface waters and the dark ocean dissected. Aquat. Microb. Ecol. 2008, 53:59.
207. Hertkorn N., Benner R., Frommberger M., Schmitt-Kopplin P., Witt M., Kaiser K., et al. Characterization of a major refractory component of marine dissolved organic matter. Geochim. Cosmochim. Acta 2006, 70:2990-3010.
208. Hmelo L.R., Mincer T.J., Van Mooy B.A.S. Possible influence of bacterial quorum sensing on the hydrolysis of sinking particulate organic carbon in marine environments. Environ. Microbiol. Rep. 2011, 3:682-688.
209. Holmes R.M., McClelland J.W., Raymond P.A., Frazer B.B., Peterson B.J., Stieglitz M. Lability of DOC transported by Alaskan rivers to the Arctic Ocean. Geophys. Res. Lett. 2008, 35:L03402.
210. Holmfeldt K., Titelman J., Riemann L. Virus production and lysate recycling in different Sub-basins of the Northern Baltic Sea. Microb. Ecol. 2010, 60:572-580.
211. Hopkinson C.S., Vallino J.J. Efficient export of carbon to the deep ocean through dissolved organic matter. Nature 2005, 433:142-145.
212. Hoppe H.G. Microbial extracellular enzyme activity: a new key parameter in aquatic ecology. Microbial Enzymes in Aquatic Environments 1991, 60-83. Springer-Verlag, New York. R.J. Chrost (Ed.).
213. Hoppe H.G., Arnosti C., Herndl G.J. Ecological significance of bacterial enzymes in the marine environment. Ezymes in the Environment: Activity, Ecology and Applications 2002, 73-108. Marcel Dekker, New York. R.G. Burns, R.P. Dick (Eds.).
214. Horvath R.S. Microbial co-metabolism and the degradation of organic compounds in nature. Bacteriol. Rev. 1972, 36:146.
215. Imai I., Ishida Y., Hata Y. Killing of marine phytoplankton by a gliding bacterium Cytophaga sp., isolated from the coastal sea of Japan. Mar. Biol. 1993, 116:527-532.
216. Ingalls A.E., Shah S.R., Hansman R.L., Aluwihare L.I., Santos G.M., Druffel E.R.M., et al. Quantifying archaeal community autotrophy in the mesopelagic ocean using natural radiocarbon. Proc. Natl. Acad. Sci. U. S. A. 2006, 103:6442-6447.
217. Ittekkot V., Brockmann U., Michaelis W., Degens E.T. Dissolved free and combined carbohydrates during a phytoplankton bloom in the northern North Sea. Mar. Ecol. Prog. Ser. 1981, 4:299-305.
218. Jahnke R., Craven D.B. Quantifying the role of heterotrophic bacteria in the carbon cycle: a need for respiration rate measurements. Limnol. Oceanogr. 1995, 40:436-441.
219. Jannasch H.W., Mottl M.J. Geomicrobiology of deep-sea hydrothermal vents. Science 1985, 229:717-725.
220. Jiao N., Herndl G.J., Hansell D.A., Benner R., Kattner G., Wilhelm S.W., et al. Microbial production of recalcitrant dissolved organic matter: long-term carbon storage in the global ocean. Nature 2010, 8:593-599.
221. Jiao N., Herndl G.J., Hansell D.A., Benner R., Kattner G., Wilhelm S.W., et al. The microbial carbon pump and the oceanic recalcitrant dissolved organic matter pool. Nat. Rev. Microbiol. 2011, 9:555.
222. Johannes R., Webb K. Release of dissolved amino acids by marine zooplankton. Science 1965, 150:76-77.
223. Jumars P.A., Penry D.L., Baross J.A., Perry M.J., Frost B.W. Closing the microbial loop: dissolved carbon pathway to heterotrophic bacteria from incomplete ingestion, digestion and absorption in animals. Deep-Sea Res. 1989, 36:483-495.
224. Jürgens K., Massana R., Kirchman D. Protist grazing on marine bacterioplankon. Microbial Ecology of the Oceans 2008, 383-442. Wiley-Liss, New York. D. Kirchman (Ed.).
225. Kadurugamuwa J.L., Beveridge T.J. Bacteriolytic effect of membrane vesicles from Pseudomonas aeruginosa on other bacteria including pathogens: conceptually new antibiotics. J. Bact. 1996, 178:2767-2774.
226. Kähler P., Bjornsen P.K., Lochte K., Antia A. Dissolved organic matter and its utilization by bacteria during spring in the Southern Ocean. Deep-Sea Res. II 1997, 44:341-353.
227. Kaiser K., Benner R. Major bacterial contribution to the ocean reservoir of detrital organic carbon and nitrogen (vol 53, pg. 99, 2008). Limnol. Oceanogr. 2008, 53:1192.
228. Kaiser K., Benner R. Biochemical composition and size distribution of organic matter at the Pacific and Atlantic time-series stations. Mar. Chem. 2009, 113:63-77.
229. Kaiser K., Benner R. Organic matter transformations in the upper mesopelagic zone of the North Pacific: chemical composition and linkages to microbial community structure. J. Geophys. Res.-Oceans 2012, 117:1023.
230. Karl D. Hidden in a sea of microbes. Nature 2002, 415:590-591.
231. Karl D.M., Hebel D.V., Björkman K., Letelier R.M. The role of dissolved organic matter release in the productivity of the oligotrophic North Pacific Ocean. Limnol. Oceanogr. 1998, 43:1270-1286.
232. Karner M., Herndl G.J. Extracellular enzymatic activity and secondary production in free-living and marine-snow-associated bacteria. Mar. Biol. 1992, 113:341-347.
233. Karner M.B., DeLong E.F., Karl D.M. Archaeal dominance in the mesopelagic zone of the Pacific Ocean. Nature 2001, 409:507-510.
234. Kattner G., Simon M., Koch B. Molecular characterization of dissolved organic matter and constraints for prokaryotic utilization. Microbial Carbon Pump in the Ocean 2011, 60-61. Science/AAAS, Washington, DC. N. Jiao, F. Azam, S. Sanders (Eds.).
235. Kawasaki N., Benner R. Bacterial release of dissolved organic matter during cell growth and decline: molecular origin and composition. Limnol. Oceanogr. 2006, 51:2170-2180.
236. Keil R.G., Kirchman D.L. Abiotic transformation of labile protein to refractory protein in sea water. Mar. Chem. 1994, 45:187-196.
237. Keil R.G., Kirchman D.L. Utilization of dissolved protein and amino acids in the northern Sargasso Sea. Aquat. Microb. Ecol. 1999, 18:293-300.
238. Kieber D.J., McDaniel J., Mopper K. Photochemical source of biological substrates in sea water: implications for carbon cycling. Nature 1989, 341:637-639.
239. Kiene R.P., Linn L.J., Bruton J.A. New and important roles for DMSP in marine microbial communities. J. Sea Res. 2000, 43:209-224.
240. Kiørboe T. Turbulence, phytoplankton cell size, and the structure of pelagic food webs. Adv. Mar. Biol. 1993, 29:72.
241. Kiørboe T., Jackson G.A. Marine snow, organic solute plumes and optimal chemosensory behavior of bacteria. Limnol. Oceanogr. 2001, 46:1309-1318.
242. Kiørboe T., Ploug H., Thygesen U.H. Fluid motion and solute distribution around sinking aggregates I. Small scales fluxes and heterogeneity of nutrients in the pelagic environment. Mar. Ecol. Prog. Ser. 2001, 211:1-13.
243. Kiørboe T., Tang K., Grossart H.-P., Ploug H. Dynamics of microbial communities on marine snow aggregates: colonization, growth, detachment, and grazing mortality of attached bacteria. Appl. Environ. Microbiol. 2003, 69:3036-3047.
244. Kirchman D.L. Limitation of bacterial growth by dissolved organic matter in the subarctic Pacific. Mar. Ecol. Prog. Ser. 1990, 62:47-54.
245. Kirchman D.L. Uptake and regeneration of inorganic nutrients by marine heterotrophic bacteria. Microbial Ecology of the Oceans 2000, 261-288. Wiley-Liss, Inc., New York. D.L. Kirchman (Ed.).
246. Kirchman D.L., Henry D.L., Dexter S.C. Adsorption of protein to surfaces in seawater. Mar. Chem. 1989, 27:201-217.
247. Kirchman D., Keil R., Wheeler P.A. Carbon limitation of ammonium uptake by heterotrophic bacteria in the subarctic Pacific. Linmol. Oceanogr. 1990, 35:1267-1278.
248. Kirchman D.L., Lancelot C., Fasham M., Legendre L., Radach G., Scott M. Dissolved organic matter in biogeochemical models of the ocean. Towards a Model of Ocean Biogeochemical Processes 1993, 209-225. Springer-Verlag, Berlin. G.T. Evans, M.J.R. Fasham (Eds.).
249. Kirchman D.L., Meon B., Ducklow H.W., Carlson C.A., Hansell D.A., Steward G.F. Glucose fluxes and concentrations of dissolved combined neutral sugars (polysaccharides) in the Ross Sea and Polar Front Zone Antarctica. Deep-Sea Res. II 2001, 48:4179-4197.
250. Koch B.P., Ludwichowski K.-U., Kattner G., Dittmar T., Witt M. Advanced characterization of marine dissolved organic matter by combining reversed-phase liquid chromatography and FT-ICR-MS. Mar. Chem. 2008, 111:233-241.
251. Kolber Z.S., Van Dover C., Niederman R., Falkowski P. Bacterial photosynthesis in surface waters of the open ocean. Nature 2000, 407:177-179.
252. Kolber Z., Plumley F.G., Lang A.S., Beatty J.T., Blankenship R.E., Vandover C.L., et al. Contribution of aerobic photoheterotrophic bacteria to carbon cycle in the ocean. Science 2001, 292:2492-2495.
253. Kragh T., Sondergaard M. Production and decomposition of new DOC by marine plankton communities: carbohydrates, refractory components and nutrient limitation. Biogeochemistry 2009, 96:177-187.
254. Kujawinski E.B. The impact of microbial metabolism on marine dissolved organic matter: insights from analytical chemistry and microbiology. Ann. Rev. Mar. Sci. 2011, 3:567-599.
255. Kujawinski E.B., Del Vecchio R., Blough N.V., Klein G.C., Marshall A.G. Probing molecular-level transformations of dissolved organic matter: insights on photochemical degradation and protozoan modification of DOM from electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry. Mar. Chem. 2004, 92:23-37.
256. Kujawinski E.B., Longnecker K., Blough N.V., Del Vecchio R., Finlay L., Kitner J.B., et al. Identification of possible source markers in marine dissolved organic matter using ultrahigh resolution mass spectrometry. Geochim. Cosmochim. Acta 2009, 73:4384-4399.
257. La Rowe D.E., Dale A.W., Amend J.P., Van Cappellen P. Thermodynamic limitations on microbially catalyzed reaction rates. Geochim. Cosmochim. Acta 2012, 90:96-109.
258. Lampert W. Release of dissolved organic carbon by grazing zooplankton. Limnol. Oceanogr. 1978, 23:831-834.
259. Lampitt R.S., Noji T., Bodugen B.v. What happens to zooplankton fecal pellets? Implication for material flux. Mar. Biol. 1990, 104:15-23.
260. Lancelot C. Gross excretion rates of natural marine phytoplankton and heterotrophic uptake of excreted products in the southern North Sea, as determined by short-term kinetics. Mar. Ecol. Prog. Ser. 1979, 1:179-186.
261. Lancelot C. Factors affecting phytoplankton extracellular release in the Southern Bight of the North Sea. Mar. Ecol. Prog. Ser. 1983, 12:115-121.
262. Lancelot C. Extracellular release of small and large molecules by phytoplankton in the Southern Bight of the North Sea. Estuar. Coast. Shelf Sci. 1984, 18:65-77.
263. Landa M., Cottrell M.T., Kirchman D.L., Blain S., Obernosterer I. Changes in bacterial diversity in response to dissolved organic matter supply in a continuous culture experiment. Aquat. Microb. Ecol. 2013, 69:157-168.
264. Lang S.Q., Butterfield D.A., Lilley M.D., Paul Johnson H., Hedges J.I. Dissolved organic carbon in ridge-axis and ridge-flank hydrothermal systems. Geochim. Cosmochim. Acta 2006, 70:3830-3842.
265. Lara R.J., Thomas D.N. Formation of recalcitrant organic matter: humification dynamics of algal derived dissolved organic carbon and its hydrophobic fractions. Mar. Chem. 1995, 51:193-199.
266. Lauro F., Bartlett D. Prokaryotic lifestyles in deep sea habitats. Extremophiles 2007, 12:15-25.
267. Lee D.Y., Rhee G.Y. Kinetics of cell death in the cyanobacterium Anabaena flos-auae and the production of dissolved organic carbon. J. Phycol. 1997, 33:991-998.
268. Letscher R.T., Hansell D.A., Carlson C.A., Lumpkin R., Knapp A.N. Dissolved organic nitrogen in the global surface ocean: distribution and fate. Global Biogeochem. Cy. 2013, 27:141-153.
269. Letscher R.T., Hansell D.A., Kadko D. Rapid removal of terrigenous dissolved organic carbon over the Eurasian shelves of the Arctic Ocean. Mar. Chem. 2011, 123:78-87.
270. Lewin R.A. Extracellular polysaccharides of green algae. Can. J. Microbiol. 1956, 2:665-672.
271. Lignell R. Excretion of organic carbon by phytoplankton: its relation to algal biomass, primary productivity and bacterial secondary productivity in the Baltic Sea. Mar. Ecol. Prog. Ser. 1990, 68:85-99.
272. Lin D., McBride M.J. Development of techniques for the genetic manipulation of the gliding bacteria Lysobacter enzymogenes and Lysobacter brunescens. Can. J. Microbiol. 1996, 42:896-902.
273. Linton J.D., Stephenson R.J. A preliminary study on growth yields in relation to the carbon and energy content of various organic growth substrates. FEMS Microbiol. Lett. 1978, 3(2):95-98.
274. Liu Y. Energy uncoupling in microbial growth under substrate-sufficient conditions. Appl. Microbiol. Biotechnol. 1998, 49:500-505.
275. Long R.A., Azam F. Microscale patchiness of bacterioplankton assemblage richness in seawater. Aquat. Microb. Ecol. 2001, 26:103-113.
276. Longhurst A.R., Harrison W.G. The biological pump: profiles of plankton production and consumption in the upper ocean. Prog. Oceanogr. 1989, 22:47-123.
277. López-Sandoval D., Fernández A., Maranón E. Dissolved and particulate primary production along a longitudinal gradient in the Mediterranean Sea. Biogeosciences 2011, 8:815-825.
278. Luo Y.-W., Friedrichs M.A.M., Doney S.C., Church M.J., Ducklow H.W. Oceanic heterotrophic bacterial nutrition by semilabile DOM as revealed by data assimilative modeling. Aquat. Microb. Ecol. 2010, 60:273-278.
279. 2. Flux of Organic Carbon by Rivers to the Ocean 1981, 360-384. U.S. Department of Energy, Washington, DC. G.E. Likens, F.T. MacKenzie, J.E. Richey, J.R. Sedell, K.K. Turekian (Eds.).
280. Magaletti E., Urbani R., Sist P., Ferrari C.R., Cicero A.M. Abundance and chemical characterization of extracellular carbohydrates released by the marine diatom Cylindrotheca fusiformis under N-and P-limitation. Eur. J. Phycol. 2004, 39:133-142.
281. Mague T.H., Freberg E., Hughes D.J., Morris I. Extracellular release of carbon by marine phytoplankton; a physiological approach. Linmol. Oceanogr. 1980, 25:262-279.
282. Maillard L.C. Action des acides amines sur les sucres; formation des melanoidines par voie methodique. Acad. Sci. Compt. Rend. 1912, 154:66-68.
283. Malmstrom R.R., Kiene R.P., Cottrell M.T., Kirchman D.L. Contribution of SAR11 bacteria to dissolved dimethylsulfoniopropionate and amino acid uptake in the North Atlantic ocean. Appl. Environ. Microbiol. 2004, 70:4129-4135.
284. Malmstrom R.R., Kiene R.P., Kirchman D.L. Identification and enumeration of bacteria assimilating dimethylsulfoniopropionate (DMSP) in the North Atlantic and Gulf of Mexico. Limnol. Oceanogr. 2004, 49:597-606.
285. Malmstrom R.R., Cottrell M.T., Elifantz H., Kirchman D.L. Biomass production and assimilation of dissolved organic matter by SAR11 bacteria in the Northwest Atlantic Ocean. Appl. Environ. Microbiol. 2005, 71:2979-2986.
286. Malmstrom R.R., Kiene R.P., Vila M., Kirchman D.L. Dimethylsulfoniopropionate (DMSP) assimilation by Synechococcus in the Gulf of Mexico and northwest Atlantic Ocean. Limnol. Oceanogr. 2005, 50:1924-1931.
287. Manahan D.T., Richardson K. Competition studies on the uptake of dissolved organic nutrients by bivalve larvae (Mytilus edulis) and marine bacteria. Mar. Biol. 1983, 75:241-247.
288. Marañón E., Cermeno P., Fernandez E., Rodriguez J., Zabala L. Significance and mechanisms of photosynthetic production of dissolved organic carbon in a coastal eutrophic ecosystem. Limnol. Oceanogr. 2004, 49:1652-1666.
289. Marañón E., Cermeno P., Perez V. Continuity in the photosynthetic production of dissolved organic carbon from eutrophic to oligotrophic waters. Mar. Ecol. Prog. Ser. 2005, 299:7-17.
290. Marchant H.J., Scott F.J. Uptake of sub-micrometer particles and dissolved organic material by Antarctic choanoflagellates. Mar. Ecol. Prog. Ser. 1993, 92:59-64.
291. Martin M.O. Predatory prokaryotes: an emerging research opportunity. J. Mol. Microbiol. Tech. 2002, 4:467-478.
292. Martin-Jezequel V., Poulet S., Harris R., Moal J., Samain J. Interspecific and intraspecific composition and variation of free amino acids in marine phytoplankton. Mar. Ecol. Prog. Ser. 1988, 44:303-313.
293. Maske H., Garcia-Mendoza E. Adsorption of dissolved organic matter to the inorganic filter substrate and its implications for 14C uptake measurements. Appl. Environ. Microbiol. 1994, 60:3887-3889.
294. Mayali X., Azam F. Algicidal bacteria in the sea and their impact on algal blooms. J. Eukaryot. Microbiol. 2004, 51:139-144.
295. McCarren J., Becker J.W., Repeta D.J., Shi Y., Young C.R., Malmstrom R.R., et al. Microbial community transcriptomes reveal microbes and metabolic pathways associated with dissolved organic matter turnover in the sea. Proc. Natl. Acad. Sci. U. S. A. 2010, 107:16420-16427.
296. McCarthy M., Hedges J., Benner R. Major biochemical composition of dissolved high molecular weight organic matter in seawater. Mar. Chem. 1996, 55:281-297.
297. McCarthy M.D., Hedges J.I., Benner R. Major bacterial contribution to marine dissolved organic nitrogen. Science 1998, 281:231-234.
298. Meador J.A., Baldwin A.J., Catala P., Jeffrey W.H., Joux F., Moss J.A., et al. Sunlight-induced DNA Damage in Marine Micro-organisms Collected Along a Latitudinal Gradient from 70° N to 68° S. Photochem. Photobiol. 2009, 85:412-420.
299. Meon B., Amon R.M. Heterotrophic bacterial activity and fluxes of dissolved free amino acids and glucose in the Arctic rivers Ob, Yenisei and the adjacent Kara Sea. Aquat. Microb. Ecol. 2004, 37:121-135.
300. Meybeck, M., 1981. River transport of organic carbon to the ocean. NAS-NRC Carbon Dioxide Effects Res. and Assessment Program: Flux of Org. Carbon by Rivers to the Ocean, pp. 219-269 (SEE N 81-30674 21-45).
301. Michaels A.F., Silver M.W. Primary production, sinking fluxes and the microbial food web. Deep-Sea Res. 1988, 35:473-490.
302. Michaels A.F., Karl D.M., Capone D.G. Element stoichiometry, new production and nitrogen fixation. Oceanography 2001, 14:68-77.
303. Michelou V.K., Cottrell M.T., Kirchman D.L. Light-stimulated bacterial production and amino acid assimilation by cyanobacteria and other microbes in the North Atlantic Ocean. Appl. Environ. Microbiol. 2007, 73:5539-5546.
304. Middelboe M. Microbial disease in the sea: effects of viruses on carbon and nutrient cycling. Infectious Disease Ecology: Effects of Ecosystems on Disease and of Disease on Ecosystems 2008, 242-259. Princeton University Press, Princeton. R.S. Ostfeld, F. Keesing, V.T. Eviner (Eds.).
305. Middelboe M., Jorgensen N.O.G. Viral lysis of bacteria: an important source of dissolved amino acids and cell wall compounds. J. Mar. Biol. Assoc. U. K. 2006, 86:605-612.
306. Middelboe M., Lyck P.G. Regeneration of dissolved organic matter by viral lysis in marine microbial communities. Aquat. Microb. Ecol. 2002, 27:187-194.
307. Middelboe M., Jorgensen N., Kroer N. Effects of viruses on nutrient turnover and growth efficiency of noninfected marine bacterioplankton. Appl. Environ. Microbiol. 1996, 62:1991-1997.
308. Middelboe M., Riemann L., Steward G.F., Hansen V., Nybroe O. Virus-induced transfer of organic carbon between marine bacteria in a model community. Aquat. Microb. Ecol. 2003, 33:1-10.
309. Middelboe M., Søndergaard M. Bacterioplankton growth yield: seasonal variations and coupling to substrate lability and β-glucosidase activity. Appl. Environ. Microbiol. 1993, 59:3916-3921.
310. Middelburg J.J. Chemoautotrophy in the ocean. Geophys. Res. Lett. 2011, 38:L24604.
311. Mills M.M., Moore C., Langlois R., Milne A., Achterberg E., Nachtigall K., et al. Nitrogen and phosphorus co-limitation of bacterial productivity and growth in the oligotrophic subtropical North Atlantic. Limnol. Oceanogr. 2008, 53:824-834.
312. Mitra A., Flynn K.J., Burkholder J., Berge T., Calbet A., Raven J.A., et al. The role of mixotrophic protists in the biological carbon pump. Biogeosciences Discussions 2013, 10:13535-13562.
313. Moeseneder M.M., Winter C., Herndl G.J. Horizontal and vertical complexity of attached and free-living bacteria of the Eastern Mediterranean Sea, determined by 16S rDNA and 16S rRNA fingerprints. Limnol. Oceanogr. 2001, 46:95-107.
314. Møller E.F. Sloppy feeding in marine copepods: prey-size-dependent production of dissolved organic carbon. J. Plank. Res. 2005, 27:27-35.
315. Møller E.F. Production of dissolved organic carbon by sloppy feeding in the copepods "Acartia tonsa," "Centropages typicus," and "Temora longicornis". Limnol. Oceanogr. 2007, 52:79-84.
316. Møller E.F., Nielsen T.G. Production of bacterial substrate by marine copepods: effect of phytoplankton biomass and cell size. J. Plank. Res. 2001, 23:527-536.
317. Møller E.F., Thor P., Nielsen T.G. Production of DOC by Calanus finmarchicusCglacialis and C. hyperboreus through sloppy feeding and leakage from fecal pellets. Mar. Ecol. Prog. Ser. 2003, 262:185-191.
318. Møller-Jensen L. Phytoplankton release of extracellular organic carbon, molecular weight composition, and bacterial assimilation. Mar. Ecol. Prog. Ser. 1983, 11:39-48.
319. Motegi C., Nagata T., Miki T., Weinbauer M.G., Legendre L., Rassoulzadegan F. Viral control of bacterial growth efficiency in marine pelagic environments. Limnol. and Oceanogr. 2009, 54(6):1901.
320. Mopper K., Kieber D.J. Photochemistry and cycling of carbon, sulfur, nitrogen and phosphorus. Biogeochemistry of Marine Dissolved Organic Matter 2002, Academic Press, San Diego.
321. Mopper K., Zhou X.L., Kieber R.J., Kieber D.J., Sikorski R.J., Jones R.D. Photochemical degradation of dissolved organic carbon and its impact on the oceanic carbon cycle. Nature 1991, 353:60-62.
322. Moran M.A., Zepp R.G. Role of photoreactions in the formation of biologically labile compounds from dissolved organic matter. Limnol. Oceanogr. 1997, 42:1307-1316.
323. Moran M.A., Zepp R.G. UV radiation effects on microbes and microbial processes. Microbial Ecology of the Oceans 2000, 201-228. Wiley-Liss Inc., New York. D.L. Kirchman (Ed.).
324. Morán X.A.G., Gasol J.M., Arin L., Estrada M. A comparison between glass fiber and membrane filters for the estimation of phytoplankton POC and DOC production. Mar. Ecol. Prog. Ser. 1999, 187:31-41.
325. Morán X., Estrada M., Gasol J., Pedros-Alio C. Dissolved primary production and the strength of phytoplankton-bacterioplankton coupling in contrasting marine regions. Microb. Ecol. 2002, 44:217-223.
326. Moreira D., Rodriguez-Valera F., Lopez-Garcia P. Metagenomic analysis of mesopelagic Antarctic plankton reveal a novel deltaproteobacteial group. Microbiology 2006, 152:505-517.
327. Morris R.M., Vergin K.L., Cho J.C., Rappe M.S., Carlson C.A., Giovannoni S.J. Temporal and spatial response of bacterioplankton lineages to annual convective overturn at the Bermuda Atlantic Time-series Study site. Limnol. Oceanogr. 2005, 50:1687-1696.
328. Mostofa K.M., Liu C.-q, Minakata D., Wu F., Vione D., Mottaleb M.A., et al. Photoinduced and microbial degradation of dissolved organic matter in natural waters. Photobiogeochemistry of Organic Matter 2013, 273-364. Springer, New York.
329. Mueller-Niklas G., Schuster S., Kaltenboeck E., Herndl G.J. Organic content and bacterial metabolism in amorphous aggregations of the northern Adriatic Sea. Limnol. Oceanogr. 1994, 39:58-68.
330. Myklestad S. Production of carbohydrates by marine planktonic diatoms. I. Comparison of nine different species in culture. J. Exp. Mar. Biol. Ecol. 1974, 15:261-274.
331. Myklestad S. Dissolved organic carbon from phytoplankton. Mar. Chem. 2000, 111-148.
332. Myklestad S., Haug A. Production of carbohydrates by the marine diatom Chaetoceros affinis var. willei (Gran) Hustedt. I. Effect of the concentration of nutrients in the culture medium. J. Exp. Mar. Biol. Ecol. 1972, 9:125-136.
333. Nagata T. Production mechanisms of dissolved organic matter. Microbial Ecology of the Oceans 2000, 121-152. Wiley-Liss, New York. D.L. Kirchman (Ed.).
334. Nagata T. Organic matter-bacteria interactions in seawater. Microbial Ecology of the Oceans 2008, 207-241. Wiley-Liss, New York. second ed.. D.L. Kirchman (Ed.).
335. Nagata T., Kirchman D.L. Release of dissolved organic matter by heterotrophic protozoa: implications for microbial foodwebs. Arch. Hydrobiol. 1992, 35:99-109.
336. Nagata T., Kirchman D.L. Release of macromolecular organic complexes by heterotrophic marine flagellates. Mar. Ecol. Prog. Ser. 1992, 83:233-240.
337. Nagata T., Kirchman D.L. Bacterial degradation of protein adsorbed to model submicron particles in seawater. Mar. Ecol. Prog. Ser. 1996, 132:241-248.
338. Nagata T., Kirchman D. Bacterial mortality: a pathway for the formation of refractory DOM. New Frontiers in Microbial Ecology: Proceedings of the Eighth International Symposium on Microbial Ecology 1999, Atlantic Canada Society for Microbial Ecology, Halifax.
339. Nagata T., Fukuda H., Fukuda R., Koike I. Bacterioplankton distribution and production in deep Pacific waters: large-scale geographic variations and possible coupling with sinking particle fluxes. Limnol. Oceanogr. 2000, 45:426-435.
340. Nagata T., Meon B., Kirchman D. Microbial degradation of peptidoglycan in seawater. Limnol. Oceanogr. 2003, 48:745-754.
341. Nelson C., Carlson C. Tracking differential incorporation of dissolved organic carbon types among diverse lineages of Sargasso Sea bacterioplankton. Environ. Microbiol. 2012, 14:1500-1516.
342. Nelson C.E., Goldberg S.J., Kelly L.W., Haas A.F., Smith J.E., Rohwer F., et al. Coral and macroalgal exudates vary in neutral sugar composition and differentially enrich reef bacterioplankton lineages. ISME J. 2013, 7:962-979.
343. Neufeld J.D., Vohra J., Dumont M.G., Leuders T., Mandfield M., Friedrich M.W., et al. DNA stable-isotope probing. Nat. Protoc. 2007, 2:860-866.
344. Noble R.T., Fuhrman J.A. Breakdown and microbial uptake of marine viruses and other lysis products. Aquat. Microb. Ecol. 1999, 20:1-11.
345. Obernosterer I., Herndl G.J. Phytoplankton extracellular release and bacterial growth: dependence on the inorganic N:P ratio. Mar. Ecol. Prog. Ser. 1995, 116:247-257.
346. Obernosterer I., Kawasaki N., Benner R. P-limitation of respiration in the Sargasso Sea and uncoupling of bacteria from P-regeneration in size-fractionation experiments. Aquat. Microb. Ecol. 2003, 32:229-237.
347. Ogawa H., Tanoue E. Dissolved organic matter in oceanic waters. J. Oceanogr. 2003, 59:129-147.
348. Ogawa H., Fukuda R., Koike I. Vertical distribution of dissolved organic carbon and nitrogen in the Southern Ocean. Deep-Sea Res. I 1999, 46:1809-1826.
349. Ogawa H., Amagai Y., Koike I., Kaiser K., Benner R. Production of refractory dissolved organic matter by bacteria. Science 2001, 292:917-920.
350. Ogura N. Rate and extent of decomposition of dissolved organic matter in the surface water. Mar. Biol. 1972, 13:89-93.
351. Orellana M.V., Hansell D.A. Ribulose-1, 5-bisphosphate carboxylase/oxygenase (RuBisCO): a long-lived protein in the deep ocean. Limnol. Oceanogr. 2012, 57:826.
352. Otake T., Nogami K., Maruyama K. Dissolved and particulate organic matter as possible food sources for eel leptocephali. Mar. Ecol. Prog. Ser. 1993, 92:27-34.
353. Ouverney C.C., Fuhrman J.A. Combined Microautoradiography-16S rRNA probe technique for determination of radioisotope uptake by specific microbial cell types in situ. Appl. Environ. Microbiol. 1999, 65:1746-1752.
354. Ouverney C.C., Fuhrman J.A. Marine planktonic Archaea take up amino acids. Appl. Environ. Microbiol. 2000, 66:4829.
355. Papadimitriou S., Kennedy H., Bentaleb I., Thomas D. Dissolved organic carbon in sediments from the eastern North Atlantic. Mar. Chem. 2002, 79:37-47.
356. Passow U. Production of transparent exopolymer particles (TEP) by phyto-and bacterioplankton. Mar. Ecol. Prog. Ser. 2002, 236:1-12.
357. Passow U. Transparent exopolymer particles (TEP) in aquatic environments. Prog. Oceanogr. 2002, 55:287-333.
358. Peltier W.R., Liu Y., Crowley J.W. Snowball Earth prevention by dissolved organic carbon remineralization. Nature 2007, 450:813-818.
359. Percival E., Anisur Rahman M., Weigel H. Chemistry of the polysaccharides of the diatom Coscinodiscus nobilis. Phytochemistry 1980, 19:809-811.
360. Pitt K.A., Welsh D.T., Condon R.H. Influence of jellyfish blooms on carbon, nitrogen and phosphorus cycling and plankton production. Hydrobiologia 2009, 616:133-149.
361. Pomeroy L.R., Wiebe W.J., Deibel D., Thompson R.J., Rowe G.R., Pakulski J.D. Bacterial response to temperature and substrate concentrations during the Newfoundland spring bloom. Mar. Ecol. Prog. Ser. 1991, 75:143-159.
362. Pomeroy L.R., Williams P.J.I., Azam F., Hobbie J.E. The microbial loop. Oceanography 2007, 20:28-33.
363. Poretsky R.S., Sun S., Mou X., Moran M.A. Transporter genes expressed by coastal bacterioplankton in response to dissolved organic carbon. Environ. Microbiol. 2010, 12:616-627.
364. Puddu A., Zoppini A., Fazi S., Rosati M., Amalfitano S., Magaletti E. Bacterial uptake of DOM released from P-limited phytoplankton. FEMS Microbiol. Ecol. 2006, 46:257-268.
365. Radić T., Ivančić I., Fuks D., Radić J. Marine bacterioplankton production of polysaccharidic and proteinaceous particles under different nutrient regimes. FEMS Microbiol. Ecol. 2006, 58:333-342.
366. Rappe M.S., Giovannoni S.J. The uncultured microbial majority. Annu. Rev. Microbiol. 2003, 57:369-394.
367. Rath J., Wu K.Y., Herndl G.J., DeLong E.F. High phylogenetic diversity in a marine-snow-associated bacterial assemblage. Aquat. Microb. Ecol. 1998, 14:261-269.
368. Reinthaler T., Herndl G.J. Seasonal dynamics of bacterial growth efficiencies in relation to phytoplankton in the southern North Sea. Aquat. Microb. Ecol. 2005, 39:7-16.
369. Reinthaler T., Winter C., Herndl G.J. Relationship between bacterioplankton richness, respiration, and production in the southern North Sea. Appl. Environ. Microbiol. 2005, 71:2260-2266.
370. Reinthaler T., van Aken H., Veth C., Arístegui J., Robinson C., Williams P., et al. Prokaryotic respiration and production in the meso- and bathypelagic realm of the eastern and western North Atlantic basin. Limnol. Oceanogr. 2006, 51:1262-1273.
371. Reinthaler T., van Aken H.M., Herndl G.J. Major contribution of autotrophy to microbial carbon cycling in the deep North Atlantic's interior. Deep-Sea Res. II 2010, 57:1572-1580.
372. Rich J.H., Kirchman D.L. Differential uptake of monosaccharides by heterotrophic bacteria and the effects of ammonium in the Equatorial Pacific. Eos Trans. Am. Geophys. Union 1994, 75:49.
373. Rich J.H., Ducklow H.W., Kirchman D.L. Concentration and uptake of neutral monosaccharides along 140W in the equatorial Pacific: contribution of glucose to heterotrophic bacterial activity and the DOM flux. Limnol. Oceanogr. 1996, 41:595-604.
374. Rivkin R.B., Legendre L. Biogenic carbon cycling in the upper ocean: effects of microbial respiration. Science 2001, 291:2398-2400.
375. Rivkin R.B., Putt M. Heterotrophy and photoheterotrophy by Antarctic microalgae: light-dependent incorporation of amino acids and glucose. J. Phycol. 1987, 23:442-452.
376. Robinson C. Heterotrophic bacterial respiration. Microbial Ecology of the Oceans 2008, 299-334. John Wiley & Sons, Inc, Hoboken, NJ. second ed. D.L. Kirchman (Ed.).
377. Robinson C., Williams P.J.l.B. Respiration and its measurement in surface marine waters. Respiration in Aquatic Ecosystems 2005, 147-180. Oxford University Press, New York. P.A. delGiorgio, P. Williams (Eds.).
378. Rocap G., Larimer F.W., Lamerdin J., Malfatti S., Chain P., Ahlgren N.A., et al. Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation. Nature 2003, 424:1042-1047.
379. Rochelle-Newall E.J., Fisher T.R., Fan C., Glibert P.M. Dynamics of chromophoric dissolved organic matter and dissolved organic carbon in experimental mesocosms. Int. J. Remote Sens. 1999, 20:627-641.
380. Rothman D.H., Hayes J.M., Summons R.E. Dynamics of the Neoproterozoic carbon cycle. Proc. Natl. Acad. Sci. U. S. A. 2003, 100:8124-8129.
381. Russell J.B., Cook G.M. Energetics of bacterial growth: balance of anabolic and catabolic reactions. Microbiol. Rev. 1995, 59:48-62.
382. Saba G.K., Steinberg D.K., Bronk D.A. Effects of diet on release of dissolved organic and inorganic nutrients by the copepod Acartia tonsa. Mar. Ecol. Prog. Ser. 2009, 386:147-161.
383. Saba G.K., Steinberg D.K., Bronk D.A. The relative importance of sloppy feeding, excretion, and fecal pellet leaching in the release of dissolved carbon and nitrogen by Acartia tonsa copepods. J. Exp. Mar. Biol. Ecol. 2011, 404:47-56.
384. Sambrotto R.N., Savidge G., Robinson C., Boyd P., Takahashi T., Karl D.M., et al. Elevated consumption of carbon relative to nitrogen in the surface ocean. Nature 1993, 363:248-250.
385. Santinelli C., Nannicini L., Seritti A. DOC dynamics in the meso and bathypelagic layers of the Mediterranean Sea. Deep-Sea Res. II 2010, 57:1446-1459.
386. Sarmento H., Romera-Castillo C., Lindh M., Pinhassi J., Sala M.M., Gasol J.M., et al. Phytoplankton species-specific release of dissolved free amino acids and their selective consumption by bacteria. Linmol. Oceanogr. 2013, 58:1123-1135.
387. Sarmiento J.L., Gruber N. Ocean Biogeochemical Dynamics 2006, Princeton University Press, Princeton, NJ.
388. Schlesinger W.H., Melack J.M. Transport of organic carbon in the world's rivers. Tellus 1981, 33:172-187.
389. Schwalbach M.S., Fuhrman J.A. Wide-ranging abundances of aerobic anoxygenic phototrophic bacteria in the world ocean revealed by epifluorescence microscopy and quantitative PCR. Limnol. Oceanogr. 2005, 50:620-628.
390. Scully N.M., Cooper W.J., Tranvik L.J. Photochemical effects on microbial activity in natural waters: the interaction of reactive oxygen species and dissolved organic matter. FEMS Microbiol. Ecol. 2003, 46:353-357.
391. Sexton P.F., Norris R.D., Wilson P.A., Pälike H., Westerhold T., Röhl U., et al. Eocene global warming events driven by ventilation of oceanic dissolved organic carbon. Nature 2011, 471:349-352.
392. Sharp J.H. Excretion of organic matter by marine phytoplankton: do healthy cells do it?. Limnol. Oceanogr. 1977, 22:381-399.
393. Sharp J.H., Carlson C.A., Peltzer E.T., Castle-Ward D.M., Savidge K.B., Rinker K.R. Final dissolved organic carbon broad community intercalibration and preliminary use of DOC reference materials. Mar. Chem. 2002, 77:239-253.
394. Sheik A.R., Brussaard C.P., Lavik G., Lam P., Musat N., Krupke A., et al. Responses of the coastal bacterial community to viral infection of the algae Phaeocystis globosa. ISME J. 2013, 8:212-225.
395. Sherr E., Sherr B. Roles of microbes in pelagic food webs: a revised concept. Linmol. Oceanogr. 1988, 33:1225-1257.
396. Sherr E.B., Sherr B.F. Significance of predation by protists in aquatic microbial food webs. Antonie van Leeuwenhoek 2002, 81:293-308.
397. Sherr B.F., Sherr E.B., Caron D.A., Vaulot D., Worden A.Z. Oceanic protists. Oceanography 2007, 20:130-134.
398. Shiah F.K., Ducklow H.W. Temperature regulation of heterotrophic bacterioplankton abundance, production, and specific growth rate in Chesapeake Bay. Limnol. Oceanogr. 1994, 39:1243-1258.
399. Shibata A., Kogure K., Koike I., Ohwada K. Formation of submicron colloidal particles from marine bacteria by viral infection. Mar. Ecol. Prog. Ser. 1997, 155:303-307.
400. Simon M., Rosenstock B. Different coupling of dissolved amino acid, protein, and carbohydrate turnover to heterotrophic picoplankton production in the Southern Ocean in austral summer and fall. Limnol. Oceanogr. 2007, 52:85.
401. Simon M., Grossart H.-P., Schweitzer B., Ploug H. Microbial ecology of organic aggregates in aquatic ecosystems. Aquat. Microb. Ecol. 2002, 28:175-211.
402. Sintes E., Stoderegger K., Parada V., Herndl G.J. Seasonal dynamics of dissolved organic matter and microbial activity in the coastal North Sea. Aquat. Microb. Ecol. 2010, 60:85-95.
403. Skoog A., Benner R. Aldoses in various size fractions of marine organic matter: implications for carbon cycling. Limnol. Oceanogr. 1997, 42:1803-1813.
404. Skoog A., Biddanda B., Benner R. Bacterial utilization of dissolved glucose in the upper water column or the Gulf of Mexico. Limnol. Oceanogr. 1999, 44:1625-1633.
405. Smith R.E. The estimation of phytoplankton production and excretion by carbon-14. Mar. Biol. Lett. 1982, 3:325-334.
406. Smith D., Simon M., Alldredge A.L., Azam F. Intense hydrolytic enzyme activity on marine aggregates and implications for rapid particle dissolution. Nature 1992, 359:139-142.
407. Smith D.C., Steward G.F., Long R.A., Azam F. Bacterial mediation of carbon fluxed during a diatom bloom in a mesocosm. Deep-Sea Res. II 1995, 42:75-98.
408. Smith W.O., Carlson C.A., Ducklow H.W., Hansell D.A. Growth dynamics of Phaeocystis antarctic-dominated plankton assemblages from the Ross Sea. Mar. Ecol. Prog. Ser. 1998, 168:229-244.
409. Søndergaard M., Schierup H.H. Release of extracellular organic carbon during a diatom bloom in Lake Moss: molecular weight fractionation. Freshwater Biol. 1981, 12:313-320.
410. Steen A.D., Ziervogel K., Arnosti C. Comparison of multivariate microbial datasets with the Shannon index: an example of using enzyme activity from diverse marine environments. Org. Geochem. 2010, 41:1019-1021.
411. Steinberg D., Saba G. Nitrogen consumption and metabolism in marine zooplankton. Nitrogen in the Marine Environment 2008, 1135-1196. Elsevier, New York. second ed.. D. Capone, D. Bronk, M. Mulholland, E. Carpenter (Eds.).
412. Steinberg D.K., Carlson C.A., Bates N.R., Johnson R.J., Michaels A.F., Knap A.H. Overview of the U.S. JGOFS Bermuda Atlantic Time-series Study (BATS): a decade-scale look at ocean biology and biogeochemistry. Deep-Sea Res. II 2001, 48:1405-1447.
413. Steinberg D.K., Carlson C.A., Bates N.R., Goldthwait S.A., Madin L.P., Michaels A.F. Zooplankton vertical migration and the active transport of dissolved organic and inorganic carbon in the Sargasso Sea. Deep-Sea Res. I 2000, 47:137-158.
414. Steinberg D.K., Goldthwait S.A., Hansell D.A. Zooplankton vertical migration and the active transport of dissolved organic and inorganic nitrogen in the Sargasso Sea. Deep-Sea Res. I 2002, 49:1445-1461.
415. Steinberg D.K., Cope J.S., Wilson S.E., Kobari T. A comparison of mesopelagic mesozooplankton community structure in the subtropical and subarctic North Pacific Ocean. Deep-Sea Res. II 2008, 55:1615-1635.
416. Stewart J.R., Brown R.M. Cytophaga that kills or lyses algae. Science 1969, 164:1523-1524.
417. Stocker R. Marine microbes see a sea of gradients. Science 2012, 338:628-633.
418. Stoderegger K., Herndl G.J. Production and release of bacterial capsular material and its subsequent utilization by marine bacterioplankton. Limnol. Oceanogr. 1998, 43:877-884.
419. Stoderegger K.E., Herndl G.J. Production of exopolymer particles by marine bacterioplankton under contrasting turbulence conditions. Mar. Ecol. Prog. Ser. 1999, 189:9-16.
420. Strom S.L. Bacerivory interactions between bacteria and their grazers. Microbial Ecology of the Ocean 2000, 351-386. Wiley-Liss, Inc, New York. D.L. Kirchman (Ed.).
421. Strom S.L. Microbial ecology of ocean biogeochemistry: a community perspective. Science 2008, 320:1043-1045.
422. Strom S.L., Benner R., Ziegler S., Dagg M.J. Planktonic grazers are a potentially important source of marine dissolved organic carbon. Limnol. Oceanogr. 1997, 42:1364-1374.
423. Stubbins A., Uher G., Law C.S., Mopper K., Robinson C., Upstill-Goddard R.C. Open-ocean carbon monoxide photoproduction. Deep-Sea Res. II 2006, 53:1695-1705.
424. Stubbins A., Niggemann J., Dittmar T. Photo-lability of deep ocean dissolved black carbon. Biogeosciences 2012, 9:1661-1670.
425. Suttle C.A. The significance of viruses to mortality in aquatic microbial communities. Microb. Ecol. 1994, 28:237-243.
426. Suttle C.A. Marine viruses-major players in the global ecosystem. Nat. Rev. Microbiol. 2007, 5:801-812.
427. Swan C., Siegel D., Nelson N., Carlson C., Nasir E. Biogeochemical and hydrographic controls on chromophoric dissolved organic matter distribution in the Pacific Ocean. Deep-Sea Res. I 2009, 56:2175-2192.
428. Swan B.K., Martinez-Garcia M., Preston C.M., Sczyrba A., Woyke T., Lamy D., et al. Potential for chemolithoautotrophy among ubiquitous bacteria lineages in the dark ocean. Science 2011, 333:1296-1300.
429. Tamburini C., Garcin J., Ragot M., Bianchi A. Biopolymer hydrolysis and bacterial production under ambient hydrostatic pressure through a 2000m water column in the NW Mediterranean. Deep-Sea Res. II 2002, 49:2109-2123.
430. Tamburini C., Garcin J., Bianchi A. Role of deep-sea bacteria in organic matter mineralization and adaptation to hydrostatic pressure conditions in the NW Mediterranean Sea. Aquat. Microb. Ecol. 2003, 32:209-218.
431. Tanoue E., Nishiyama S., Kamo M., Tsugita A. Bacterial membranes: possible source of a major dissolved protein in seawater. Geochim. Cosmochim. Acta 1995, 59:2643-2648.
432. Taylor G.T., Iturriaga R., Sullivan C.W. Interactions of bacterivorous grazers and heterotrophic bacteria with dissolved organic matter. Mar. Ecol. Prog. Ser. 1985, 23:129-141.
433. Taylor G.T., Iabichella M., Ho T.-Y., Scranton M.I., Thunell R.C., Muller-Karger F., et al. Chemoautotrophy in the redox transition zone of the Cariaco Basin: a significant midwater source of organic carbon production. Limnol. Oceanogr. 2001, 46:148-163.
434. Teira E., Pazo M.J., Serret P., Fernandez E. Dissolved organic carbon production by microbial populations in the Atlantic Ocean. Limnol. Oceanogr. 2001, 46:1370-1377.
435. Teira E., Pazo M.J., Quevedo M., Fuentes M.V., Niell F.X., Fernandez E. Rates of dissolved organic carbon production and bacterial activity in the eastern North Atlantic Subtropical Gyre during summer. Mar. Ecol. Prog. Ser. 2003, 249:53-67.
436. Teira E., Reinthaler T., Pernthaler A., Pernthaler J., Herndl G.J. Hybridization and microautoradiography to detect substrate utilization by Bacteria and Archaea in the deep ocean. Appl. Environ. Microbiol. 2004, 70:4411-4414.
437. Teira E., Lebaron P., van Aken H., Herndl G.J. Distribution and activity of Bacteria and Archaea in the deep water masses of the North Atlantic. Limnol. Oceanogr. 2006, 51:2131-2144.
438. Thingstad T.F., Lignell R. Theoretical models for the control of bacterial growth rate, abundance, diversity and carbon demand. Aquat. Microb. Ecol. 1997, 13:19-27.
439. Thingstad T.F., Hagstrom A., Rassoulzadegan F. Accumulation of degradable DOC in surface waters: is it caused by a malfunctioning microbial loop?. Limnol. Oceanogr. 1997, 42:398-404.
440. Thingstad T.F., Zweifel U.L., Rassoulzadegan F. P limitation of heterotrophic bacteria and phytoplankton in the northwest Mediterranean. Limnol. Oceanogr. 1998, 43:88-94.
441. Tillmann U. Kill and eat your predator: a winning strategy of the planktonic flagellate Prymnesium parvum. Aquat. Microb. Ecol. 2003, 32:73-84.
442. Tortell P.D., Maldonado M.T., Granger J., Price N.M. Marine bacteria and biogeochemical cycling of iron in the oceans. FEMS Microbiol. Ecol. 1999, 29:1-11.
443. Tranvik L.J. Microbial transformation of labile dissolved organic matter into humic-like matter in seawater. FEMS Microbiol. Ecol. 1993, 12:177-183.
444. Tranvik L.J., Bertilsson S. Contrasting effects of solar UV radiation on dissolved organic sources for bacterial growth. Ecol. Lett. 2001, 4:458-463.
445. Tranvik L., Kokalj S. Decreased biodegradability of algal DOC due to interactive effects of UV radiation and humic matter. Aquat. Microb. Ecol. 1998, 14:301-307.
446. Tranvik L.J., Sherr E., Sherr B.F. Uptake and utilization of 'colloidal DOM' by heterotrophic flagellates in seawater. Mar. Ecol. Prog. Ser. 1993, 92:301-309.
447. Treusch A.H., Vergin K.L., Finlay L.A., Donatz M.G., Burton R.M., Carlson C.A., et al. Seasonality and vertical structure of microbial communities in an ocean gyre. ISME J. 2009, 3:1148-1163.
448. Urban-Rich J. Release of dissolved organic carbon from copepod fecal pellets in the Greeland Sea. J. Exp. Mar. Biol. Ecol. 1999, 232:107-124.
449. Veldhuis M.J.W., Admiraal W. Transfer of photosynthetic products in gelatinous colonies of Phaeocystis pouchetii (Haptophyceae) and its effect on the measurement of excretion rate. Mar. Ecol. Prog. Ser. 1985, 26:301-304.
450. Vallino J.J., Hopkinson C.S., Hobbie J.E. Modeling bacterial utilization of dissolved organic matter: Optimization replaces Monod growth kinetics. Limnol. Oceanogr. 1996, 41:1591-1609.
451. Venter J.C., Remington K., Heidelberg J.F., Halpern A.L., Rusch D., Eisen J.A., et al. Environmental genome shotgun sequencing of the Sargasso Sea. Science 2004, 304:66-72.
452. Verdugo P., Alldredge A.L., Azam F., Kirchman D.L., Passow U., Santschi P.H. The oceanic gel phase: a bridge in the DOM-POM continuum. Mar. Chem. 2004, 92:67-85.
453. Verdugo P., Carlson C., Giovannoni S. Marine microgels. Ann. Rev. Mar. Sci. 2012, 4:375-400.
454. Vergin K.L., Beszteri B., Monier A., Thrash J.C., Temperton B., Treusch A.H., et al. High-resolution SAR11 ecotype dynamics at the Bermuda Atlantic Time-series Study site by phylogenetic placement of pyrosequences. ISME J. 2013, 7:1322-1332.
455. Vezzi A., Campanaro S., D'Angelo M., Simonato F., Vitulo N., Lauro F.M., et al. Life at depth: Photobacterium profundum genome sequence and expression analysis. Science 2005, 307:1459-1461.
456. 15N-labelled diatoms: methodology and trophic studies. J. Exp. Mar. Biol. Ecol. 2007, 352:295-305.
457. Vraspir J.M., Butler A. Chemistry of marine ligands and siderophores. Ann. Rev. Mar. Sci. 2009, 1:43.
458. Wakeham S.G., Pease T.K., Benner R. Hydroxy fatty acids in marine dissolved organic matter as indicators of bacterial membrane material. Org. Geochem. 2003, 34:857-868.
459. Walsh D.A., Zaikova E., Howes C.G., Song Y.C., Wright J.J., Tringe S.G., et al. Metagenome of a versatile chemolithoautotroph from expanding oceanic dead zones. Science 2009, 326:578-582.
460. Weinbauer M.G., Peduzzi P. Effect of virus-rich high molecular weight concentrates of seawater on the dynamics of dissolved amino acids and carbohydrates. Mar. Ecol. Prog. Ser. 1995, 127:245-253.
461. Weinbauer M.G., Bonilla-Findji O., Chan A.M., Dolan J.R., Short S.M., Simek K., et al. Synechococcus growth in the ocean may depend on the lysis of heterotrophic bacteria. J. Plank. Res. 2011, 33:1465-1476.
462. Weissbach A., Tillmann U., Legrand C. Allelopathic potential of the dinoflagellate Alexandrium tamarense on marine microbial communities. Harmful Algae 2010, 10:9-18.
463. Wells M.L. Marine colloids and trace metals. Biogeochemistry of Marine Dissolved Organic Matter 2002, 367-404. Elsevier Science, USA.
464. Wells M.L., Goldberg E.D. Colloid aggregation in seawater. Mar. Chem. 1993, 41:353-358.
465. Westernhoff H.V., Hellingwerf K.J., Dam K.V. Thermodyanic efficiency of microbial growth is low but optimal for maximal growth rate. Proc. Natl. Acad. Sci. U. S. A. 1983, 80:305-309.
466. Wetz M.S., Wheeler P.A. Production and partitioning of organic matter during simulated phytoplankton blooms. Limnol. Oceanogr. 2003, 48:1808-1817.
467. Wetz M.S., Wheeler P.A. Release of dissolved organic matter by coastal diatoms. Limnol. Oceanogr. 2007, 52:798-807.
468. Whitman W.B., Coleman D.C., Wiebe W.J. Prokaryotes: the unseen majority. Proc. Natl. Acad. Sci. U. S. A. 1998, 95:6578-6583.
469. Wiebe W.J., Smith D.F. Direct measurement of dissolved organic carbon release by phytoplankton and incorporation by microheterotrophs. Mar. Biol. 1977, 42:213-223.
470. Wilhelm S.W., Suttle C.A. Viruses and nutrient cycles in the sea. BioScience 1999, 49:781-788.
471. Willey J.D., Kieber R.J., Eyman M.S., Avery G.B. Rainwater dissolved organic carbon: concentrations and global flux. Global Biogeochem. Cycles 2000, 14:139-148.
472. Willey J.D., Kieber R.J., Avery G.B. Changing chemical composition of precipitation in Wilmington, North Carolina, USA: implications for the continental USA. Environ. Sci. Technol. 2006, 40:5675-5680.
473. Williams P.J.L.B. Heterotrophic utilization of dissolved organic compound in the sea. I. Size distribution of population and relationship between respiration and incorporation of growth substrates. J. Mar. Biol. Assoc. U.K. 1970, 50:859-870.
474. Williams P.J.L. Incorporation of microheterotrophic processes into the classical paradigm of the planktonic food web. Kiel. Meeresforsch. 1981, 5:1-28.
475. Williams P.J.L.B. The importance of losses during microbial growth: commentary on the physiology, measurement and ecology of the release of dissolved organic material. Mar. Microb. Food Webs 1990, 4:175-206.
476. Williams P.J.L. Evidence for the seasonal accumulation of carbon-rich dissolved organic material, its scale in comparison with changes in particulate material and the consequential effect on net C/N assimilation ratios. Mar. Chem. 1995, 51:17-29.
477. Williams P.J.l. Heterotrophic bacteria and the dynamics of dissolved organic material. Microbial Ecology of the Oceans 2000, 153-200. Wiley-Liss, New York. D.L. Kirchman (Ed.).
478. Williams P.M., Druffel E.R.M. Radiocarbon in dissolved organic matter in the central North Pacific Ocean. Nature 1987, 330:246-248.
479. Williams P.J.L., Morris P.J., Karl D.M. Net communtiy production and metabolic balance at the oligotrophic ocean site, station ALOHA. Deep-Sea Res. I 2004, 51:1563-1578.
480. Wolfe G.V. The chemical defense ecology of marine unicellular plankton: constraints, mechanisms, and impacts. Biol. Bull. 2000, 198:225-244.
481. Wommack K.E., Colwell R.R. Virioplankton: viruses in aquatic ecosystems. Microbiol. Mol. Biol. Rev. 2000, 64:69-114.
482. Wood A., Van Valen L. Paradox lost? On the release of energy-rich compounds by phytoplankton. Mar. Microb. Food Webs 1990, 4:103-116.
483. Worden A.Z., Not F. Ecology and diversity of picoeukaryotes. Microbial Ecology of the Oceans 2008, 159-205. Wiley-Liss, New York. second ed.. D.L. Kirchman (Ed.).
484. Yamashita Y., Tanoue E. Production of bio-refractory interior. Nat. Geosci. 2008, 1:579-582.
485. Yurkov V., Csotonyi J.T. New light on aerobic anoxygenic phototrophs. The Purple Phototrophic Bacteria 2008, 31-55. Springer, New York.
486. Ziolkowski L., Druffel E. Aged black carbon identified in marine dissolved organic carbon. Geophys. Res. Lett. 2010, 37:L16601.
487. Zubkov M.V. Photoheterotrophy in marine prokaryotes. J. Plank. Res. 2009, 31:933-938.
488. Zubkov M.V., Tarran G.A. Amino acid uptake of Prochlorococcus spp. in surface waters across the South Atlantic Subtropical Front. Aquat. Microb. Ecol. 2005, 40:241-249.
489. Zusheng L., Clarke A.J., Beveridge R.J. Gram-negative bacteria produce membrane vesicles which are capable of killing other bacteria. J. Bact. 1998, 180:5478-5483.
490. Zweifel U.L. Factors controlling accumulation of labile dissolved organic carbon in the Gulf of Riga. Estuar. Coast. Shelf Sci. 1999, 48:357-370.
491. Zweifel U.L., Norrman B., Hagstrm K. Consumption of dissolved organic carbon by marine bacteria and demand for inorganic nutrients. Mar. Ecol. Prog. Ser. 1993, 101:23-32.