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Volumn 8, Issue 1, 2014, Pages 212-225

Responses of the coastal bacterial community to viral infection of the algae Phaeocystis globosa

Author keywords

Alteromonas and Roseobacter; carbon remineralisation; marine viruses; nanoSIMS; Phaeocystis globosa; pyrosequencing

Indexed keywords

CARBON; NITROGEN; RNA 16S; SEA WATER;

EID: 84891154815     PISSN: 17517362     EISSN: 17517370     Source Type: Journal    
DOI: 10.1038/ismej.2013.135     Document Type: Article
Times cited : (62)

References (51)
  • 1
    • 33846467724 scopus 로고    scopus 로고
    • Abundance and activity of major groups of prokaryotic plankton in the coastal north sea during spring and summer
    • Alderkamp AC, Sintes E, Herndl GJ. (2006). Abundance and activity of major groups of prokaryotic plankton in the coastal North Sea during spring and summer. Aquat Microb Ecol 45: 237-246.
    • (2006) Aquat Microb Ecol , vol.45 , pp. 237-246
    • Alderkamp, A.C.1    Sintes, E.2    Herndl, G.J.3
  • 2
    • 34548414947 scopus 로고    scopus 로고
    • Response of alteromonadaceae and rhodobacteriaceae to glucose and phosphorus manipulation in marine mesocosms
    • Allers E, Gómez-Consarnau L, Pinhassi J, Gasol JM, Simek K, Pernthaler J. (2007). Response of Alteromonadaceae and Rhodobacteriaceae to glucose and phosphorus manipulation in marine mesocosms. Environ Microbiol 9: 2417-2429.
    • (2007) Environ Microbiol , vol.9 , pp. 2417-2429
    • Allers, E.1    Gómez-Consarnau, L.2    Pinhassi, J.3    Gasol, J.M.4    Simek, K.5    Pernthaler, J.6
  • 4
    • 0343765712 scopus 로고    scopus 로고
    • Modern methods in subsurface microbiology: In situ identification of microorganisms with nucleic acid probes
    • Amann R, Glockner FO, Neef A. (1997). Modern methods in subsurface microbiology: in situ identification of microorganisms with nucleic acid probes. Fems Microbiol Rev 20: 191-200.
    • (1997) Fems Microbiol Rev , vol.20 , pp. 191-200
    • Amann, R.1    Glockner, F.O.2    Neef, A.3
  • 5
    • 33746895151 scopus 로고    scopus 로고
    • Improved method for isotopic and quantitative analysis of dissolved inorganic carbon in natural water samples
    • Assayag N, Rivé K, Ader M, Jézéquel D, Agrinier P. (2006). Improved method for isotopic and quantitative analysis of dissolved inorganic carbon in natural water samples. Rapid Commun Mass Spectrom 20: 2243-2251.
    • (2006) Rapid Commun Mass Spectrom , vol.20 , pp. 2243-2251
    • Assayag, N.1    Rivé, K.2    Ader, M.3    Jézéquel, D.4    Agrinier, P.5
  • 7
    • 25144447544 scopus 로고    scopus 로고
    • Characterization of different viruses infecting the marine harmful algal bloom species phaeocystis globosa
    • Baudoux AC, Brussaard CPD. (2005). Characterization of different viruses infecting the marine harmful algal bloom species Phaeocystis globosa. Virology 341: 80-90.
    • (2005) Virology , vol.341 , pp. 80-90
    • Baudoux, A.C.1    Brussaard, C.P.D.2
  • 8
    • 33750932981 scopus 로고    scopus 로고
    • Virally induced mortality of phaeocystis globosa during two spring blooms in temperate coastal waters
    • Baudoux AC, Noordeloos AAM, Veldhuis MJW, Brussaard CPD. (2006). Virally induced mortality of Phaeocystis globosa during two spring blooms in temperate coastal waters. Aquat Microb Ecol 44: 207-217.
    • (2006) Aquat Microb Ecol , vol.44 , pp. 207-217
    • Baudoux, A.C.1    Noordeloos, A.A.M.2    Veldhuis, M.J.W.3    Brussaard, C.P.D.4
  • 9
    • 0000820590 scopus 로고
    • Chemotactic and growth responses of marine bacteria to algal extracellular products
    • Bell W, Mitchell R. (1972). Chemotactic and growth responses of marine bacteria to algal extracellular products. Biol Bull 143: 265-277.
    • (1972) Biol Bull , vol.143 , pp. 265-277
    • Bell, W.1    Mitchell, R.2
  • 10
    • 0030470058 scopus 로고    scopus 로고
    • Impact of phytoplankton bloom magnitude on a pelagic microbial food web
    • Brussaard CPD, Gast GJ, vanDuyl FC, Riegman R. (1996). Impact of phytoplankton bloom magnitude on a pelagic microbial food web. Mar Ecol Prog Ser 144: 211-221.
    • (1996) Mar Ecol Prog Ser , vol.144 , pp. 211-221
    • Brussaard, C.P.D.1    Gast, G.J.2    VanDuyl, F.C.3    Riegman, R.4
  • 11
    • 1642386112 scopus 로고    scopus 로고
    • Optimization of procedures for counting viruses by flow cytometry
    • Brussaard CPD. (2004). Optimization of procedures for counting viruses by flow cytometry. Appl Environ Microbiol 70: 1506-1513.
    • (2004) Appl Environ Microbiol , vol.70 , pp. 1506-1513
    • Brussaard, C.P.D.1
  • 12
    • 15944429299 scopus 로고    scopus 로고
    • A mesocosm study of phaeocystis globosa population dynamics: 1. Regulatory role of viruses in bloom
    • Brussaard CPD, Kuipers B, Veldhuis MJW. (2005a). A mesocosm study of Phaeocystis globosa population dynamics: 1. Regulatory role of viruses in bloom. Harmful Algae 4: 859-874.
    • (2005) Harmful Algae , vol.4 , pp. 859-874
    • Brussaard, C.P.D.1    Kuipers, B.2    Veldhuis, M.J.W.3
  • 13
    • 21744432083 scopus 로고    scopus 로고
    • A mesocosm study of phaeocystis globosa (prymnesiophyceae) population dynamics - Ii. Significance for the microbial community
    • Brussaard CPD, Mari X, Van Bleijswijk JDL, Veldhuis MJW. (2005b). A mesocosm study of Phaeocystis globosa (Prymnesiophyceae) population dynamics - II. Significance for the microbial community. Harmful Algae 4: 875-893.
    • (2005) Harmful Algae , vol.4 , pp. 875-893
    • Brussaard, C.P.D.1    Mari, X.2    Van Bleijswijk, J.D.L.3    Veldhuis, M.J.W.4
  • 16
    • 0026314636 scopus 로고
    • Wide-spread occurrence and clonal variation in viruses which cause lysis of a cosmopolitan, eukaryotic marine phytoplankter, micromonas pusilla
    • Cottrell MT, Suttle CA. (1991). Wide-spread occurrence and clonal variation in viruses which cause lysis of a cosmopolitan, eukaryotic marine phytoplankter, Micromonas pusilla. Mar Ecol Prog Ser 78: 1-9.
    • (1991) Mar Ecol Prog Ser , vol.78 , pp. 1-9
    • Cottrell, M.T.1    Suttle, C.A.2
  • 17
    • 77957244650 scopus 로고    scopus 로고
    • Search and clustering orders of magnitude faster than blast
    • Edgar RC. (2010). Search and clustering orders of magnitude faster than BLAST. Bioinformatics 26: 2460-2461.
    • (2010) Bioinformatics , vol.26 , pp. 2460-2461
    • Edgar, R.C.1
  • 19
    • 0035514014 scopus 로고    scopus 로고
    • Isolation of novel pelagic bacteria from the german bight and their seasonal contributions to surface picoplankton
    • Eilers H, Pernthaler J, Peplies J, Glockner FO, Gerdts G, Amann R. (2001). Isolation of novel pelagic bacteria from the German Bight and their seasonal contributions to surface picoplankton. Appl Environ Microbiol 67: 5134-5142.
    • (2001) Appl Environ Microbiol , vol.67 , pp. 5134-5142
    • Eilers, H.1    Pernthaler, J.2    Peplies, J.3    Glockner, F.O.4    Gerdts, G.5    Amann, R.6
  • 20
    • 0034548858 scopus 로고    scopus 로고
    • Changes in community composition during dilution cultures of marine bacterioplankton as assessed by flow cytometric and molecular biological techniques
    • Fuchs BM, Zubkov MV, Sahm K, Burkill PH, Amann R. (2000). Changes in community composition during dilution cultures of marine bacterioplankton as assessed by flow cytometric and molecular biological techniques. Environ Microbiol 2: 191-201.
    • (2000) Environ Microbiol , vol.2 , pp. 191-201
    • Fuchs, B.M.1    Zubkov, M.V.2    Sahm, K.3    Burkill, P.H.4    Amann, R.5
  • 21
    • 84865724817 scopus 로고    scopus 로고
    • Structuring of bacterioplankton communities by specific dissolved organic carbon compounds
    • Gómez-Consarnau L, Lindh MV, Gasol JM, Pinhassi J. (2012). Structuring of bacterioplankton communities by specific dissolved organic carbon compounds. Environ Microbiol 14: 2361-2378.
    • (2012) Environ Microbiol , vol.14 , pp. 2361-2378
    • Gómez-Consarnau, L.1    Lindh, M.V.2    Gasol, J.M.3    Pinhassi, J.4
  • 22
    • 0001914227 scopus 로고
    • Culture of phytoplankton for feeding marine invertebrates
    • Smith,Walter L, Chanley Matoira H (eds) Greenport, NY Oct, 1972 Viii338p. Illus Plenum Press: New York, NY, USA; London, England Isbn 0-306-30804-30805
    • Guillard RRL. (1975). Culture of phytoplankton for feeding marine invertebrates. Smith,Walter L, Chanley Matoira H (eds) Culture of Marine Invertebrate Animals Conference, Greenport, NY Oct, 1972 Viii338p. Illus Plenum Press: New York, NY, USA; London, England Isbn 0-306-30804-5 29-60.
    • (1975) Culture of Marine Invertebrate Animals Conference , pp. 29-60
    • Guillard, R.R.L.1
  • 23
    • 63349093927 scopus 로고    scopus 로고
    • Viral lysis of phaeocystis pouchetii: Implications for algal population dynamics and heterotrophic c, n and p cycling
    • Haaber J, Middelboe M. (2009). Viral lysis of Phaeocystis pouchetii: Implications for algal population dynamics and heterotrophic C, N and P cycling. ISME J 3: 430-441.
    • (2009) ISME J , vol.3 , pp. 430-441
    • Haaber, J.1    Middelboe, M.2
  • 25
    • 0036490066 scopus 로고    scopus 로고
    • Two species of culturable bacteria associated with degradation of brown algae fucus evanescens
    • Ivanova EP, Bakunina IY, Sawabe T, Hayashi K, Alexeeva YV, Zhukova NV et al. (2002). Two species of culturable bacteria associated with degradation of brown algae Fucus evanescens. Microb Ecol 43: 242-249.
    • (2002) Microb Ecol , vol.43 , pp. 242-249
    • Ivanova, E.P.1    Bakunina, I.Y.2    Sawabe, T.3    Hayashi, K.4    Alexeeva, Y.V.5    Zhukova, N.V.6
  • 26
    • 77956757916 scopus 로고    scopus 로고
    • Temporal changes of major bacterial groups and bacterial heterotrophic activity during a phaeocystis globosa bloom in the eastern english channel
    • Lamy D, Obernosterer I, Laghdass M, Artigas F, Breton E, Grattepanche JD et al. (2009). Temporal changes of major bacterial groups and bacterial heterotrophic activity during a Phaeocystis globosa bloom in the eastern English Channel. Aquat Microb Ecol 58: 95-107.
    • (2009) Aquat Microb Ecol , vol.58 , pp. 95-107
    • Lamy, D.1    Obernosterer, I.2    Laghdass, M.3    Artigas, F.4    Breton, E.5    Grattepanche, J.D.6
  • 28
    • 9344247522 scopus 로고    scopus 로고
    • Application of a suite of 16s rrna-specific oligonucleotide probes designed to investigate bacteria of the phylum cytophagaflavobacter- bacteroides in the natural environment
    • Manz W, Amann R, Ludwig W, Vancanneyt M, Schleifer K-H. (1996). Application of a suite of 16S rRNA-specific oligonucleotide probes designed to investigate bacteria of the phylum cytophagaflavobacter- bacteroides in the natural environment. Microbiology 142: 1097-1106.
    • (1996) Microbiology , vol.142 , pp. 1097-1106
    • Manz, W.1    Amann, R.2    Ludwig, W.3    Vancanneyt, M.4    Schleifer, K.-H.5
  • 29
    • 0027068041 scopus 로고
    • Phylogenetic oligodeoxynucleotide probes for the major subclasses of proteobacteria: Problems and solutions
    • Manz W, Amann R, Ludwig W, Wagner M, Schleifer KH. (1992). Phylogenetic oligodeoxynucleotide probes for the major subclasses of proteobacteria: problems and solutions. Syst Appl Microbiol 15: 593-600.
    • (1992) Syst Appl Microbiol , vol.15 , pp. 593-600
    • Manz, W.1    Amann, R.2    Ludwig, W.3    Wagner, M.4    Schleifer, K.H.5
  • 30
    • 21744462971 scopus 로고    scopus 로고
    • Dynamics of transparent exopolymeric particles (tep) production by phaeocystis globosa under n- or p-limitation: A controlling factor of the retention/export balance
    • Mari X, Rassoulzadegan F, Brussaard CPDD, Wassmann P. (2005). Dynamics of transparent exopolymeric particles (TEP) production by Phaeocystis globosa under N- or P-limitation: a controlling factor of the retention/export balance. Harmful Algae 4: 895-914.
    • (2005) Harmful Algae , vol.4 , pp. 895-914
    • Mari, X.1    Rassoulzadegan, F.2    Cpdd, B.3    Wassmann, P.4
  • 31
    • 0141788404 scopus 로고    scopus 로고
    • Virus-induced transfer of organic carbon between marine bacteria in a model community
    • MiddelboeM, Riemann L, Steward GF, Hansen V, NybroeO. (2003). Virus-induced transfer of organic carbon between marine bacteria in a model community. Aquat Microb Ecol 33: 1-10.
    • (2003) Aquat Microb Ecol , vol.33 , pp. 1-10
    • MiddelboeM Riemann, L.1    Steward, G.F.2    Hansen, V.3    Nybroe, O.4
  • 34
    • 33645880129 scopus 로고    scopus 로고
    • Viral burst size of heterotrophic prokaryotes in aquatic systems
    • Parada V, Herndl GJ, Weinbauer MG. (2006). Viral burst size of heterotrophic prokaryotes in aquatic systems. J Marine Biol Assoc UK 86: 613-621.
    • (2006) J Marine Biol Assoc UK , vol.86 , pp. 613-621
    • Parada, V.1    Herndl, G.J.2    Weinbauer, M.G.3
  • 35
    • 33744745905 scopus 로고    scopus 로고
    • Marine microbial diversity: Can it be determined
    • Pedros-Alio C. (2006). Marine microbial diversity: can it be determined Trends Microbiol 14: 257-263.
    • (2006) Trends Microbiol , vol.14 , pp. 257-263
    • Pedros-Alio, C.1
  • 36
    • 21244484895 scopus 로고    scopus 로고
    • Sensitive multi-color fluorescence in situ hybridization for the identification of environmental microorganisms
    • Pernthaler A, Pernthaler J, Amann R. (2004). Sensitive multi-color fluorescence in situ hybridization for the identification of environmental microorganisms. Mol Microb Ecol Manual 3: 711-726.
    • (2004) Mol Microb Ecol Manual , vol.3 , pp. 711-726
    • Pernthaler, A.1    Pernthaler, J.2    Amann, R.3
  • 37
    • 0035461236 scopus 로고    scopus 로고
    • Growth patterns of two marine isolates: Adaptations to substrate patchiness
    • Pernthaler A, Pernthaler J, Eilers H, Amann R. (2001). Growth patterns of two marine isolates: Adaptations to substrate patchiness Appl Environ Microbiol 67: 4077.
    • (2001) Appl Environ Microbiol , vol.67 , pp. 4077
    • Pernthaler, A.1    Pernthaler, J.2    Eilers, H.3    Amann, R.4
  • 38
  • 40
    • 0002171796 scopus 로고
    • On the proportions of organic derivatives in sea water and their relation to the composition of plankton
    • Redfield AC. (1934). On the proportions of organic derivatives in sea water and their relation to the composition of plankton. James Johnstone Memorial Vol 176: 92.
    • (1934) James Johnstone Memorial , vol.176 , pp. 92
    • Redfield, A.C.1
  • 41
    • 51349129702 scopus 로고    scopus 로고
    • Elevated lytic phage production as a consequence of particle colonization by a marine flavobacterium (cellulophaga sp
    • Riemann L, Grossart HP. (2008). Elevated lytic phage production as a consequence of particle colonization by a marine Flavobacterium (Cellulophaga sp.). Microbial Ecol 56: 505-512.
    • (2008) Microbial Ecol , vol.56 , pp. 505-512
    • Riemann, L.1    Grossart, H.P.2
  • 43
    • 34247628559 scopus 로고    scopus 로고
    • Isolation of methylophaga spp. From marine dimethylsulfide-degrading enrichment cultures and identification of polypeptides induced during growth on dimethylsulfide
    • Schafer H. (2007). Isolation of Methylophaga spp. from marine dimethylsulfide-degrading enrichment cultures and identification of polypeptides induced during growth on dimethylsulfide. Appl Environ Microbiol 73: 2580-2591.
    • (2007) Appl Environ Microbiol , vol.73 , pp. 2580-2591
    • Schafer, H.1
  • 44
    • 84986811823 scopus 로고
    • Marine snow: Microscale nutrient patches
    • Shanks AL, Trent JD. (1979). Marine snow: Microscale nutrient patches. Limnol Oceanograph 24: 850-854.
    • (1979) Limnol Oceanograph , vol.24 , pp. 850-854
    • Shanks, A.L.1    Trent, J.D.2
  • 45
    • 84876459113 scopus 로고    scopus 로고
    • Viral infection of phaeocystis globosa impedes release of chitinous star-like structures: Quantification using single cell approaches
    • Sheik AR, Brussaard CPD, Lavik G, Foster RA, Musat N, Adam B et al. (2013). Viral infection of Phaeocystis globosa impedes release of chitinous star-like structures: quantification using single cell approaches. Environ Microbiol 15: 1441-1451.
    • (2013) Environ Microbiol , vol.15 , pp. 1441-1451
    • Sheik, A.R.1    Brussaard, C.P.D.2    Lavik, G.3    Foster, R.A.4    Musat, N.5    Adam, B.6
  • 46
    • 79960039272 scopus 로고    scopus 로고
    • Tag-encoded flx amplicon pyrosequencing for the elucidation of microbial and functional gene diversity in any environment
    • Clifton, Nj)
    • Sun Y, Wolcott RD, Dowd SE. (2011). Tag-encoded FLX amplicon pyrosequencing for the elucidation of microbial and functional gene diversity in any environment. Methods Mol Biol (Clifton, Nj) 733: 129-141.
    • (2011) Methods Mol Biol , vol.733 , pp. 129-141
    • Sun, Y.1    Wolcott, R.D.2    Dowd, S.E.3
  • 47
    • 25144506135 scopus 로고    scopus 로고
    • Viruses in the sea
    • Suttle CA. (2005). Viruses in the sea. Nature 437: 356-361.
    • (2005) Nature , vol.437 , pp. 356-361
    • Suttle, C.A.1
  • 48
    • 84860488672 scopus 로고    scopus 로고
    • Substrate-controlled succession of marine bacterioplankton populations induced by a phytoplankton bloom
    • Teeling H, Fuchs BM, Becher D, Klockow C, Gardebrecht A, Bennke CMet al. (2012). Substrate-controlled succession of marine bacterioplankton populations induced by a phytoplankton bloom. Science 336: 608-611.
    • (2012) Science , vol.336 , pp. 608-611
    • Teeling, H.1    Fuchs, B.M.2    Becher, D.3    Klockow, C.4    Gardebrecht, A.5    Bennke, C.M.6
  • 49
    • 0032858844 scopus 로고    scopus 로고
    • Viruses and nutrient cycles in the sea
    • Wilhelm SW, Suttle CA. (1999). Viruses and nutrient cycles in the sea. Bioscience 49: 781-788.
    • (1999) Bioscience , vol.49 , pp. 781-788
    • Wilhelm, S.W.1    Suttle, C.A.2
  • 51
    • 0035214934 scopus 로고    scopus 로고
    • Linking the composition of bacterioplankton to rapid turnover of dissolved dimethylsulphoniopropionate in an algal bloom in the north sea
    • Zubkov MV, Fuchs BM, Archer SD, Kiene RP, Amann R, Burkill PH. (2001). Linking the composition of bacterioplankton to rapid turnover of dissolved dimethylsulphoniopropionate in an algal bloom in the North Sea. Environ Microbiol 3: 304-311.
    • (2001) Environ Microbiol , vol.3 , pp. 304-311
    • Zubkov, M.V.1    Fuchs, B.M.2    Archer, S.D.3    Kiene, R.P.4    Amann, R.5    Burkill, P.H.6


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