Oceanic protists

Oceanography

Volumn 20, Issue SPL.ISS. 2, 2007, Pages 130-134

  Sherr, Barry F ^a   Sherr, Evelyn B ^a   Caron, David A ^b   Vaulot, Daniel ^c   Worden, Alexandra Z ^d  

^a OREGON STATE UNIVERSITY   (United States)

^b UNIVERSITY OF SOUTHERN CALIFORNIA   (United States)

^c STATION BIOLOGIQUE DE ROSCOFF   (France)

^d UNIVERSITY OF MIAMI   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 78649537857     PISSN: 10428275     EISSN: None     Source Type: Journal    
DOI: 10.5670/oceanog.2007.57     Document Type: Article

References (47)

1. Armbrust, E.V., J.A. Berges, C. Bowler, B.R. Green, Diego Martinez, Nicholas H. Putnam, Shiguo Zhou, Andrew E. Allen, and others. 2004. The genome of the diatom Thalassiosira pseudonana: Ecology, evolution, and metabolism. Science 306:79-86.
2. Boenigk, J., K. Pfandl, T. Garstecki, H. Harms, G. Novarino, and A. Chatzinotas. 2006. Evidence for geographic isolation and signs of endemism within a protistan morphospecies. Applied and Environmental Microbiology 72:5,159-5,164.
3. Calbet, A., and M.R. Landry. 2004. Phytoplankton growth, microzooplankton grazing, and carbon cycling in marine systems. Limnology and Oceanography 40:51-57.
4. Caron, D.A. 2000. Symbiosis and mixotrophy among pelagic microorganisms. Pp. 495-523 in Microbial Ecology of the Oceans. D.L. Kirchman, ed., Wiley-Liss, New York.
5. Caron, D.A., and J.C. Goldman. 1990. Nutrient regeneration. Pp. 283-306 in Ecology of Marine Protozoa. G.M. Capriulo, ed., Oxford University Press, New York.
6. Caron, D.A., and N.R. Swanberg. 1990. The ecology of planktonic sarcodines. Reviews in Aquatic Sciences 3:147-180.
7. Countway, P.D., and D.A. Caron. 2006. Abundance and distribution of Ostreococcus sp. in the San Pedro Channel, California, as revealed by quantitative PCR. Applied and Environmental Microbiology 72:2,496-2,506.
8. Courties, C., A. Vaquer, M. Troussellier, J. Lautier, M.J. Chrétiennot-Dinet, J. Neveux, C. Machado, and H. Claustre. 1994. Smallest eukaryotic organism. Nature 370:255.
9. Derelle, E., C. Ferraz, S. Rombauts, P. Rouzé, A.Z. Worden, S. Robbens, F. Partensky, S. Degroeve, S. Echeynié, R. Cooke, and others. 2006. Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features. Proceedings of the National Academy of Sciences of the United States of America 103:11,647-11,652.
10. Diéz, B., C. Pedrós-Alió, and R. Massana. 2001. Study of genetic diversity of eukaryotic picoplankton in different oceanic regions by small-subunit rRNA gene cloning and sequencing. Applied and Environmental Microbiology 67:2,932-2,941.
11. Fenchel, T. 2005. Cosmopolitan microbes and their 'cryptic' species. Aquatic Microbial Ecology 41:49-54.
12. Foster, R.A., J.L. Collier, and E.J. Carpenter. 2006. Reverse transcription PCR amplification of cyanobacterial symbiont 16s rRNA sequences from single non-photosynthetic eukaryotic marine planktonic host cells. Journal of Phycology 42:243-250
13. Gast, R.J., D.M. Moran, M.R. Dennett, and D.A. Caron. 2007. Kleptoplasty in an Antarctic dinoflagellate: caught in evolutionary transition? Environmental Microbiology 9(1):39-45, doi: 10.1111/j.1462-2920.2006.01109.x.
14. Groisillier, A., R. Massana, K. Valentin, D. Vaulot, and L. Guillou. 2006. Genetic diversity and habitats of two enigmatic marine alveolate lineages. Aquatic Microbial Ecology 42:277-291.
15. Guillou, L., M. Chrétiennot-Dinet, S. Boulben, S. Moon-van der Staay, and D. Vaulot. 1999. Symbiomonas scintillans gen. et sp nov and Picophagus flagellatus gen. et sp nov (Heterokonta): Two new heterotrophic flagellates of picoplanktonic size. Protist 150:383-398.
16. Guillou, L., S. Jacquet, M. Chrétiennot-Dinet, and D. Vaulot. 2001. Grazing impact of two small heterotrophic flagellates on Prochlorococcus and Synechococcus. Aquatic Microbial Ecology 26:201-207.
17. Hansen, P.J. 1992. Particle size selection, feeding rates and growth dynamics of marine heterotrophic dinoflagellates, with special emphasis on Gyrodinium spirale. Marine Biology 114:327-334.
18. Jeong, H.J. 1999. The ecological roles of heterotrophic dinoflagellates in marine planktonic community. Journal of Eukaryotic Microbiology 46:390-396.
19. Jurgens, K., and C. Matz. 2002. Predation as a shaping force for the phenotypic and genotypic composition of planktonic bacteria. Antonie Van Leewenhoek International Journal of General and Molecular Microbiology 81:413-434.
20. Katz, L. A, G.B. McManus, O.L.O. Snoeyenbos-West, A. Griffin, K. Pirog, B. Costas, and W. Foissner. 2005. Reframing the 'Everything is everywhere' debate: Evidence for high gene flow and diversity in ciliate morphospecies. Aquatic Microbial Ecology 41:55-65.
21. King, N. 2004. The unicellular ancestry of animal development. Developmental Cell 7:313-325.
22. Kuhn, S., L. Medlin, and G. Eller. 2004. Phylogenetic position of the parasitoid nanoflagellate Pirsonia inferred from nuclearencoded small subunit ribosomal DNA and a description of Pseudopirsonia n. gen. and Pseudopirsonia mucosa (Drebes) comb. nov. Protist 155:143-156.
23. Legendre, L., and J. Le Fevre. 1995. Microbial food webs and the export of biogenic carbon in oceans. Aquatic Microbial Ecology 9:69-77.
24. Lessard, E.J. 1991. The trophic role of heterotrophic dinoflagellates in diverse marine environments. Marine Microbial Food Webs 5:49-58.
25. Li, W.K.W. 2002. Macroecological patterns of phytoplankton in the northwestern North Atlantic Ocean. Nature 419:154-157.
26. López-Garcia, P., F. Rodríguez-Valera, C. Pedrós-Alió, and D. Moreira. 2001. Unexpected diversity of small eukaryotes in deep-sea Antarctic plankton. Nature 409:603-607.
27. Massana, R., R. Terrado, I. Forn, C. Lovejoy, and C. Pedrós-Alió. 2006. Distribution and abundance of uncultured heterotrophic flagellates in the world oceans. Environmental Microbiology 8:1,515-1,522.
28. Matz, C., P. Deines, J. Boenigk, H. Arndt, L. Eberl, S. Kjelleberg, and K. Jurgens. 2004. Impact of violacein-producing bacteria on survival and feeding of bacterivorous nanoflagellates. Applied and Environmental Microbiology 70:1,593-1,599.
29. Modeo, L., G. Petroni, G. Rosati, and D.J.S. Montagnes. 2003. A multidisciplinary approach to describe protists: Redescriptions of Novistrombidium testaceum Anigstein 1914 and Strombidium inclinatum Montagnes, Taylor and Lynn 1990 (Ciliophora, Oligotrichia). Journal of Eukaryotic Microbiology 50(3):175-189.
30. Moon-Van Der Staay, S.Y., R. De Wachter, and D. Vaulot. 2001. Oceanic 18S rDNA sequences from picoplankton reveal unsuspected eukaryotic diversity. Nature 409:607-610.
31. Not, F., R. Massana, M. Latasa, D. Marie, C. Colson, W. Eikrem, C. Pedros-Alio, D. Vaulot, and M. Simon. 2005. Late summer community composition and abundance of photosynthetic picoeukaryotes in Norwegian and Barents Seas. Limnology and Oceanography 50:1,677-1,686.
32. Sarno, D., W.H.C.F. Kooistra, L. Medlin, I. Percopo, and A. Zingone. 2005. Diversity in the genus Skeletonema (Bacillariophyceae). II. An assessment of the taxonomy of S. costatum-like species with the description of four new species. Journal of Phycology 41:151-176.
33. Sherr, E.B., and B.F. Sherr. 2002. Significance of predation by protists in aquatic microbial food webs. Antonie Van Leewenhoek International Journal of General and Molecular Microbiology 81:293-308.
34. Stoecker, D.K. 1992. "Animals" that photosynthesize and "plants" that eat. Oceanus 35:24-27.
35. Stoecker, D.K., and J.M. Capuzzo. 1990. Predation on protozoa: Its importance to zooplankton. Journal of Plankton Research 12:891-908.
36. Strom, S.L. 2000. Bacterivory: Interactions between bacteria and their grazers. Pp 351-286 in Microbial Ecology of the Oceans. D.L. Kirchman, ed., Wiley-Liss, New York.
37. Strom, S.L., and H. Loukos. 1998. Selective feeding by protozoa: Model and experimental behaviors and their consequences for population stability. Journal of Plankton Research 20:831-846.
38. Strom, S. L., G.V. Wolfe, J.L. Holmes, H.A. Stecher, C. Shimeneck, S. Lambert, and E. Moreno. 2003. Chemical defense in the microplankton: I. Feeding and growth rates of heterotrophic protists on the DMS-producing phytoplankter Emiliania huxleyi. Limnology and Oceanography 48:217-229.
39. Suzuki, M.T. 1999. Effect of protistan bacterivory on coastal bacterioplankton diversity. Aquatic Microbial Ecology 20:261-272.
40. Théodorides, J. 1987. Parasitology of marine zooplankton. Advances in Marine Biology 25:117-177.
41. Verity, P.G. 1991. Feeding in planktonic protozoans: Evidence for non-random acquisition of prey. Marine Microbial Food Webs 5:69-76.
42. Wolfe, G.V. 2000. The chemical defense ecology of marine unicellular plankton: Constraints, mechanisms, and impacts. The Biological Bulletin 198:225-244.
43. Wootton, E.C., M.V. Zubkov, D.H. Jones, R.H. Jones, C.M. Martel, C.A. Thornton, and E.C. Roberts. 2006. Biochemical prey recognition by planktonic protozoa. Environmental Microbiology doi:10.1111/j.1462-2920.2006.01130.x.
44. Worden, A.Z. 2006. Picoeukaryote diversity in coastal waters of the Pacific Ocean. Aquatic Microbial Ecology 43:165-175.
45. Worden, A.Z., and B.J. Binder. 2003. Application of dilution experiments for measuring growth and mortality rates among Prochlorococcus and Synechococcus populations in oligotrophic environments. Aquatic Microbial Ecology 30:159-174.
46. Worden A.Z., J.K. Nolan, and B. Palenik 2004. Assessing the dynamics and ecology of marine picophytoplankton: The importance of the eukaryotic component. Limnology and Oceanography 49:168-179.
47. Zingone, A., I. Percopo, P.A. Sims, and D. Sarno. 2005. Diversity in the genus Skeletonema (Bacillariophyceae): I. A reexamination of the type material of S. costatum with the description of S. grevillei sp. nov. Journal of Phycology 41:140-50.