CopywriteR: DNA copy number detection from off-target sequence data

Genome Biology

Volumn 16, Issue 1, 2015, Pages

  Kuilman, Thomas ^a   Velds, Arno ^a   Kemper, Kristel ^a   Ranzani, Marco ^b   Bombardelli, Lorenzo ^a   Hoogstraat, Marlous ^a   Nevedomskaya, Ekaterina ^a   Xu, Guotai ^a   de Ruiter, Julian ^a   Lolkema, Martijn P ^c   Ylstra, Bauke ^d   Jonkers, Jos ^a   Rottenberg, Sven ^a,e   Wessels, Lodewyk F ^a   Adams, David J ^b   Peeper, Daniel S ^a   Krijgsman, Oscar ^a  

^a NETHERLANDS CANCER INSTITUTE   (Netherlands)

^b WELLCOME TRUST SANGER INSTITUTE   (United Kingdom)

^c Center for Personalized Cancer Treatment   (Netherlands)

^d VU UNIVERSITY MEDICAL CENTER   (Netherlands)

^e UNIVERSITY OF BERN   (Switzerland)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CHROMATIN IMMUNOPRECIPITATION; CONTROLLED STUDY; DNA DETERMINATION; GENE DOSAGE; GENE SEQUENCE; GENETIC ALGORITHM; INTERMETHOD COMPARISON; REPRODUCIBILITY; SEQUENCE ANALYSIS; SEQUENCE DATABASE; SIGNAL NOISE RATIO; SINGLE NUCLEOTIDE POLYMORPHISM; WHOLE EXOME SEQUENCING; ALGORITHM; COPY NUMBER VARIATION; DNA SEQUENCE; EXOME; EXON; GENETICS; HIGH THROUGHPUT SEQUENCING; HUMAN; HUMAN GENOME;

ALGORITHMS; DNA COPY NUMBER VARIATIONS; EXOME; EXONS; GENOME, HUMAN; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; HUMANS; SEQUENCE ANALYSIS, DNA;

EID: 84937691121     PISSN: 14747596     EISSN: 1474760X     Source Type: Journal    
DOI: 10.1186/s13059-015-0617-1     Document Type: Article

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