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Volumn 4, Issue 7, 2015, Pages 731-742

Robust expansion of human pluripotent stem cells: Integration of bioprocess design with transcriptomic and metabolomic characterization

Author keywords

Human pluripotent stem cells; Metabolic profiling; Stirred tank bioreactors; Transcriptional profiling; Xeno free microcarriers

Indexed keywords

ALPHA SMOOTH MUSCLE ACTIN; ENOLASE; FRUCTOSE BISPHOSPHATE ALDOLASE; GLUCOSE 6 PHOSPHATE ISOMERASE; GLUCOSE TRANSPORTER; GLUCOSE TRANSPORTER 1; HEPATOCYTE NUCLEAR FACTOR 3BETA; OCTAMER TRANSCRIPTION FACTOR 4; PROTEIN; STAGE SPECIFIC EMBRYO ANTIGEN 4; TRA1 60 PROTEIN; TRANSCRIPTION FACTOR NANOG; UNCLASSIFIED DRUG; UVOMORULIN;

EID: 84936999040     PISSN: 21576564     EISSN: 21576580     Source Type: Journal    
DOI: 10.5966/sctm.2014-0270     Document Type: Article
Times cited : (35)

References (40)
  • 1
    • 84856007232 scopus 로고    scopus 로고
    • The promise of induced pluripotent stem cells in research and therapy
    • Robinton DA, Daley GQ. The promise of induced pluripotent stem cells in research and therapy. Nature 2012; 481: 295-305.
    • (2012) Nature , vol.481 , pp. 295-305
    • Robinton, D.A.1    Daley, G.Q.2
  • 2
    • 79955464098 scopus 로고    scopus 로고
    • The use of induced pluripotent stem cells in drug development
    • Inoue H, Yamanaka S. The use of induced pluripotent stem cells in drug development. Clin Pharmacol Ther 2011; 89: 655-661.
    • (2011) Clin Pharmacol Ther , vol.89 , pp. 655-661
    • Inoue, H.1    Yamanaka, S.2
  • 3
    • 84896836202 scopus 로고    scopus 로고
    • Human pluripotent stem cell culture: Considerations for maintenance, expansion, and therapeutics
    • Chen KG, Mallon BS, McKay RDG et al. Human pluripotent stem cell culture: Considerations for maintenance, expansion, and therapeutics. Cell Stem Cell 2014; 14: 13-26.
    • (2014) Cell Stem Cell , vol.14 , pp. 13-26
    • Chen, K.G.1    Mallon, B.S.2    McKay, R.D.G.3
  • 4
    • 84901241149 scopus 로고    scopus 로고
    • Hippo/YAP-mediated rigidity-dependent motor neuron differentiation of human pluripotent stem cells
    • Sun Y, Yong KMA, Villa-Diaz LG et al. Hippo/YAP-mediated rigidity-dependent motor neuron differentiation of human pluripotent stem cells. Nat Mater 2014; 13: 599-604.
    • (2014) Nat Mater , vol.13 , pp. 599-604
    • Sun, Y.1    Yong, K.M.A.2    Villa-Diaz, L.G.3
  • 5
    • 84861345298 scopus 로고    scopus 로고
    • Process engineering of human pluripotent stem cells for clinical application
    • SerraM, Brito C, CorreiaCet al. Process engineering of human pluripotent stem cells for clinical application. Trends Biotechnol 2012; 30: 350-359.
    • (2012) Trends Biotechnol , vol.30 , pp. 350-359
    • Serra, M.1    Brito, C.2    Correia, C.3
  • 6
    • 84868016949 scopus 로고    scopus 로고
    • Bioprocess development for mass production of size-controlled human pluripotent stem cell aggregates in stirred suspension bioreactor
    • Abbasalizadeh S, Larijani MR, Samadian A et al. Bioprocess development for mass production of size-controlled human pluripotent stem cell aggregates in stirred suspension bioreactor. Tissue Eng Part C Methods 2012; 18: 831-851.
    • (2012) Tissue Eng Part C Methods , vol.18 , pp. 831-851
    • Abbasalizadeh, S.1    Larijani, M.R.2    Samadian, A.3
  • 7
    • 77955057824 scopus 로고    scopus 로고
    • Improving expansion of pluripotent human embryonic stem cells in perfused bioreactors through oxygen control
    • Serra M, Brito C, Sousa MFQ et al. Improving expansion of pluripotent human embryonic stem cells in perfused bioreactors through oxygen control. J Biotechnol 2010; 148: 208-215.
    • (2010) J Biotechnol , vol.148 , pp. 208-215
    • Serra, M.1    Brito, C.2    Sousa, M.F.Q.3
  • 8
    • 84891352376 scopus 로고    scopus 로고
    • A fully defined and scalable 3D culture system for human pluripotent stem cell expansion and differentiation
    • Lei Y, Schaffer DV. A fully defined and scalable 3D culture system for human pluripotent stem cell expansion and differentiation. Proc Natl Acad Sci USA 2013; 110: E5039-E5048.
    • (2013) Proc Natl Acad Sci USA , vol.110 , pp. E5039-E5048
    • Lei, Y.1    Schaffer, D.V.2
  • 9
    • 84888069210 scopus 로고    scopus 로고
    • Allogeneic cell therapy bioprocess economics and optimization: Single-use cell expansion technologies
    • Simaria AS, Hassan S, Varadaraju H et al. Allogeneic cell therapy bioprocess economics and optimization: Single-use cell expansion technologies. Biotechnol Bioeng 2014; 111: 69-83.
    • (2014) Biotechnol Bioeng , vol.111 , pp. 69-83
    • Simaria, A.S.1    Hassan, S.2    Varadaraju, H.3
  • 10
    • 77955004097 scopus 로고    scopus 로고
    • Large-scale expansion of pluripotent human embryonic stem cells in stirred-suspension bioreactors
    • Krawetz R, Taiani JT, Liu S et al. Large-scale expansion of pluripotent human embryonic stem cells in stirred-suspension bioreactors. Tissue Eng Part C Methods 2010; 16: 573-582.
    • (2010) Tissue Eng Part C Methods , vol.16 , pp. 573-582
    • Krawetz, R.1    Taiani, J.T.2    Liu, S.3
  • 11
    • 77049125102 scopus 로고    scopus 로고
    • Scalable stirred-suspension bioreactor culture of human pluripotent stem cells
    • Kehoe DE, Jing D, Lock LT et al. Scalable stirred-suspension bioreactor culture of human pluripotent stem cells. Tissue Eng Part A 2010; 16: 405-421.
    • (2010) Tissue Eng Part A , vol.16 , pp. 405-421
    • Kehoe, D.E.1    Jing, D.2    Lock, L.T.3
  • 12
    • 84894146232 scopus 로고    scopus 로고
    • Facile engineering of xeno-free microcarriers for the scalable cultivation of human pluripotent stem cells in stirred suspension
    • Fan Y, Hsiung M, Cheng C et al. Facile engineering of xeno-free microcarriers for the scalable cultivation of human pluripotent stem cells in stirred suspension. Tissue Eng Part A 2014; 20: 588-599.
    • (2014) Tissue Eng Part A , vol.20 , pp. 588-599
    • Fan, Y.1    Hsiung, M.2    Cheng, C.3
  • 13
    • 84898634267 scopus 로고    scopus 로고
    • Long term expansion of bonemarrow-derived hMSCs on novel synthetic microcarriers in xeno-free, defined conditions
    • Hervy M, Weber JL, PecheulMet al. Long term expansion of bonemarrow-derived hMSCs on novel synthetic microcarriers in xeno-free, defined conditions. PLoS One 2014; 9: e92120.
    • (2014) PLoS One , vol.9
    • Hervy, M.1    Weber, J.L.2    Pecheul, M.3
  • 14
    • 77953284319 scopus 로고    scopus 로고
    • Synthetic peptide-acrylate surfaces for long-term self-renewal and cardiomyocyte differentiation of human embryonic stem cells
    • Melkoumian Z, Weber JL, Weber DM et al. Synthetic peptide-acrylate surfaces for long-term self-renewal and cardiomyocyte differentiation of human embryonic stem cells. Nat Biotechnol 2010; 28: 606-610.
    • (2010) Nat Biotechnol , vol.28 , pp. 606-610
    • Melkoumian, Z.1    Weber, J.L.2    Weber, D.M.3
  • 15
    • 77951002352 scopus 로고    scopus 로고
    • The senescence-relatedmitochondrial/oxidativestress pathway is repressed in human induced pluripotent stem cells
    • Prigione A, Fauler B, Lurz R et al. The senescence-relatedmitochondrial/oxidativestress pathway is repressed in human induced pluripotent stem cells. STEM CELLS 2010; 28: 721-733.
    • (2010) STEM CELLS , vol.28 , pp. 721-733
    • Prigione, A.1    Fauler, B.2    Lurz, R.3
  • 16
    • 37449024702 scopus 로고    scopus 로고
    • The biology of cancer: Metabolic reprogramming fuels cell growth and proliferation
    • DeBerardinis RJ, Lum JJ, Hatzivassiliou G et al. The biology of cancer: Metabolic reprogramming fuels cell growth and proliferation. Cell Metab 2008; 7: 11-20.
    • (2008) Cell Metab , vol.7 , pp. 11-20
    • DeBerardinis, R.J.1    Lum, J.J.2    Hatzivassiliou, G.3
  • 17
    • 84884417502 scopus 로고    scopus 로고
    • Metabolism in physiological cell proliferation and differentiation
    • Agathocleous M, Harris WA. Metabolism in physiological cell proliferation and differentiation. Trends Cell Biol 2013; 23: 484-492.
    • (2013) Trends Cell Biol , vol.23 , pp. 484-492
    • Agathocleous, M.1    Harris, W.A.2
  • 18
    • 79959221064 scopus 로고    scopus 로고
    • Energy metabolism in human pluripotent stem cells and their differentiated counterparts
    • Varum S, Rodrigues AS, Moura MB et al. Energy metabolism in human pluripotent stem cells and their differentiated counterparts. PLoS One 2011; 6: e20914.
    • (2011) PLoS One , vol.6
    • Varum, S.1    Rodrigues, A.S.2    Moura, M.B.3
  • 19
    • 34547158898 scopus 로고    scopus 로고
    • Facilitated expansion of human embryonic stem cells by single-cell enzymatic dissociation
    • Ellerström C, Strehl R, Noaksson K et al. Facilitated expansion of human embryonic stem cells by single-cell enzymatic dissociation. STEM CELLS 2007; 25: 1690-1696.
    • (2007) STEM CELLS , vol.25 , pp. 1690-1696
    • Ellerström, C.1    Strehl, R.2    Noaksson, K.3
  • 20
    • 79961158737 scopus 로고    scopus 로고
    • Microencapsulation technology: A powerful tool for integrating expansion and cryopreservation of humanembryonic stem cells
    • Serra M, Correia C, Malpique R et al. Microencapsulation technology: A powerful tool for integrating expansion and cryopreservation of humanembryonic stem cells. PLoS One 2011; 6: e23212.
    • (2011) PLoS One , vol.6
    • Serra, M.1    Correia, C.2    Malpique, R.3
  • 21
    • 58149314043 scopus 로고    scopus 로고
    • Stirred bioreactors for the expansion of adult pancreatic stem cells
    • SerraM, Brito C, Leite SB et al. Stirred bioreactors for the expansion of adult pancreatic stem cells. Ann Anat 2009; 191: 104-115.
    • (2009) Ann Anat , vol.191 , pp. 104-115
    • Serra, M.1    Brito, C.2    Leite, S.B.3
  • 22
    • 79953267538 scopus 로고    scopus 로고
    • A bioinformatic assay for pluripotency in human cells
    • Müller F-J, Schuldt BM, Williams R et al. A bioinformatic assay for pluripotency in human cells. Nat Methods 2011; 8: 315-317.
    • (2011) Nat Methods , vol.8 , pp. 315-317
    • Müller, F.-J.1    Schuldt, B.M.2    Williams, R.3
  • 23
    • 28744458859 scopus 로고    scopus 로고
    • Bioconductor: Open software development for computational biology and bioinformatics
    • Gentleman RC, Carey VJ, Bates DM et al. Bioconductor: Open software development for computational biology and bioinformatics. Genome Biol 2004; 5: R80.
    • (2004) Genome Biol , vol.5
    • Gentleman, R.C.1    Carey, V.J.2    Bates, D.M.3
  • 24
    • 46249088370 scopus 로고    scopus 로고
    • Lumi: A pipeline for processing Illumina microarray
    • Du P, Kibbe WA, Lin SM. lumi: A pipeline for processing Illumina microarray. Bioinformatics 2008; 24: 1547-1548.
    • (2008) Bioinformatics , vol.24 , pp. 1547-1548
    • Du, P.1    Kibbe, W.A.2    Lin, S.M.3
  • 25
    • 77952851186 scopus 로고    scopus 로고
    • Comparison of normalization methods for Illumina BeadChip HumanHT-12 v3
    • Schmid R, Baum P, Ittrich C et al. Comparison of normalization methods for Illumina BeadChip HumanHT-12 v3. BMC Genomics 2010; 11: 349.
    • (2010) BMC Genomics , vol.11 , pp. 349
    • Schmid, R.1    Baum, P.2    Ittrich, C.3
  • 26
    • 39149111937 scopus 로고    scopus 로고
    • Model-based variance-stabilizing transformation for Illumina microarray data
    • LinSM, Du P, HuberWet al. Model-based variance-stabilizing transformation for Illumina microarray data. Nucleic Acids Res 2008; 36: e11.
    • (2008) Nucleic Acids Res , vol.36
    • Lin, S.M.1    Du, P.2    Huber, W.3
  • 27
    • 0037316303 scopus 로고    scopus 로고
    • A comparison of normalization methods for high density oligonucleotide array data based on variance and bias
    • Bolstad BM, Irizarry RA, AstrandMet al. A comparison of normalization methods for high density oligonucleotide array data based on variance and bias. Bioinformatics 2003; 19: 185-193.
    • (2003) Bioinformatics , vol.19 , pp. 185-193
    • Bolstad, B.M.1    Irizarry, R.A.2    Astrand, M.3
  • 28
    • 70449527810 scopus 로고    scopus 로고
    • Improving baculovirus production at high cell density through manipulation of energy metabolism
    • Carinhas N, Bernal V, MonteiroF et al. Improving baculovirus production at high cell density through manipulation of energy metabolism. Metab Eng 2010; 12: 39-52.
    • (2010) Metab Eng , vol.12 , pp. 39-52
    • Carinhas, N.1    Bernal, V.2    Monteiro, F.3
  • 29
    • 0035710746 scopus 로고    scopus 로고
    • Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method
    • Livak KJ, Schmittgen TD. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. Methods 2001; 25: 402-408.
    • (2001) Methods , vol.25 , pp. 402-408
    • Livak, K.J.1    Schmittgen, T.D.2
  • 30
    • 75549090505 scopus 로고    scopus 로고
    • TheMeta-Cycdatabaseofmetabolic pathwaysandenzymes and the BioCyc collection of pathway/genome databases
    • Caspi R, AltmanT, DaleJMet al. TheMeta-Cycdatabaseofmetabolic pathwaysandenzymes and the BioCyc collection of pathway/genome databases. Nucleic Acids Res 2010; 38: D473-D479.
    • (2010) Nucleic Acids Res , vol.38 , pp. D473-D479
    • Caspi, R.1    Altman, T.2    Dale, J.M.3
  • 31
    • 84886481436 scopus 로고    scopus 로고
    • Metabolic pathways recruited in the production of a recombinant enveloped virus: Mining targets for process and cell engineering
    • Rodrigues AF, Formas-Oliveira AS, Bandeira VS et al. Metabolic pathways recruited in the production of a recombinant enveloped virus: Mining targets for process and cell engineering. Metab Eng 2013; 20: 131-145.
    • (2013) Metab Eng , vol.20 , pp. 131-145
    • Rodrigues, A.F.1    Formas-Oliveira, A.S.2    Bandeira, V.S.3
  • 32
    • 84870589926 scopus 로고    scopus 로고
    • A synthetic, xeno-free peptide surface for expansion and directed differentiation of human induced pluripotent stemcells
    • Jin S, Yao H, Weber JL et al. A synthetic, xeno-free peptide surface for expansion and directed differentiation of human induced pluripotent stemcells. PLoS One 2012; 7: e50880.
    • (2012) PLoS One , vol.7
    • Jin, S.1    Yao, H.2    Weber, J.L.3
  • 33
    • 85006007589 scopus 로고    scopus 로고
    • Defining synthetic surfaces for human pluripotent stem cell culture
    • Lambshead JW, Meagher L, O'Brien C et al. Defining synthetic surfaces for human pluripotent stem cell culture. Cell Regen (Lond) 2013; 2: 7.
    • (2013) Cell Regen (Lond) , vol.2 , pp. 7
    • Lambshead, J.W.1    Meagher, L.2    O'Brien, C.3
  • 35
    • 33847287408 scopus 로고    scopus 로고
    • Differences between human embryonic stem cell lines
    • Allegrucci C, Young LE. Differences between human embryonic stem cell lines. Hum Reprod Update 2007; 13: 103-120.
    • (2007) Hum Reprod Update , vol.13 , pp. 103-120
    • Allegrucci, C.1    Young, L.E.2
  • 36
    • 84868347607 scopus 로고    scopus 로고
    • Metabolic plasticity in stemcell homeostasis and differentiation
    • FolmesCDL, DzejaPP, NelsonTJ et al. Metabolic plasticity in stemcell homeostasis and differentiation. Cell Stem Cell 2012; 11: 596-606.
    • (2012) Cell Stem Cell , vol.11 , pp. 596-606
    • Folmes, C.D.L.1    Dzeja, P.P.2    Nelson, T.J.3
  • 37
    • 84868351585 scopus 로고    scopus 로고
    • Metabolic regulation in pluripotent stem cells during reprogramming and self-renewal
    • Zhang J, Nuebel E, Daley GQ et al. Metabolic regulation in pluripotent stem cells during reprogramming and self-renewal. Cell Stem Cell 2012; 11: 589-595.
    • (2012) Cell Stem Cell , vol.11 , pp. 589-595
    • Zhang, J.1    Nuebel, E.2    Daley, G.Q.3
  • 38
    • 0033568454 scopus 로고    scopus 로고
    • Glut-1 and hexokinase expression: Relationship with 2-fluoro-2-deoxy-D-glucose uptake in A431 and T47D cells in culture
    • Aloj L, Caraćo C, Jagoda E et al. Glut-1 and hexokinase expression: Relationship with 2-fluoro-2-deoxy-D-glucose uptake in A431 and T47D cells in culture. Cancer Res 1999; 59: 4709-4714.
    • (1999) Cancer Res , vol.59 , pp. 4709-4714
    • Aloj, L.1    Caraćo, C.2    Jagoda, E.3
  • 39
    • 84888832728 scopus 로고    scopus 로고
    • Comparative analysis of amino acid metabolism and transport in CHO variants with different levels of productivity
    • Kyriakopoulos S, Polizzi KM, Kontoravdi C. Comparative analysis of amino acid metabolism and transport in CHO variants with different levels of productivity. J Biotechnol 2013; 168: 543-551.
    • (2013) J Biotechnol , vol.168 , pp. 543-551
    • Kyriakopoulos, S.1    Polizzi, K.M.2    Kontoravdi, C.3
  • 40
    • 0034730151 scopus 로고    scopus 로고
    • Redox state is a central modulator of the balance between self-renewal and differentiation in a dividing glial precursor cell
    • Smith J, Ladi E, Mayer-ProschelMet al. Redox state is a central modulator of the balance between self-renewal and differentiation in a dividing glial precursor cell. Proc Natl Acad Sci USA 2000; 97: 10032-10037.
    • (2000) Proc Natl Acad Sci USA , vol.97 , pp. 10032-10037
    • Smith, J.1    Ladi, E.2    Mayer-Proschel, M.3


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