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Volumn 7, Issue 3, 2015, Pages 706-719

Phylogenomics of phrynosomatid lizards: Conflicting signals from sequence capture versus restriction site associated DNA sequencing

Author keywords

Coalescence; ddRADseq; Incomplete lineage sorting; RADseq; Single nucleotide polymorphism; Species tree; Ultraconserved elements

Indexed keywords

RESTRICTION ENDONUCLEASE;

EID: 84936771254     PISSN: None     EISSN: 17596653     Source Type: Journal    
DOI: 10.1093/gbe/evv026     Document Type: Article
Times cited : (127)

References (70)
  • 1
    • 80053359585 scopus 로고    scopus 로고
    • The genome of the green anole lizard and a comparative analysis with birds and mammals
    • Alföldi J, et al. 2011. The genome of the green anole lizard and a comparative analysis with birds and mammals. Nature 477:587-591.
    • (2011) Nature , vol.477 , pp. 587-591
    • Alföldi, J.1
  • 2
    • 84919752971 scopus 로고    scopus 로고
    • Trade-offs and utility of alternative RADseq methods
    • Andrews KR, et al. 2014. Trade-offs and utility of alternative RADseq methods. Mol Ecol. 23:5943-5946.
    • (2014) Mol Ecol. , vol.23 , pp. 5943-5946
    • Andrews, K.R.1
  • 3
    • 84878449439 scopus 로고    scopus 로고
    • RADseq underestimates diversity and introduces genealogical biases due to nonrandom haplotype sampling
    • Arnold B, Corbett-Detig RB, Hartl D, Bomblies K. 2013. RADseq underestimates diversity and introduces genealogical biases due to nonrandom haplotype sampling. Mol Ecol. 22:3179-3190.
    • (2013) Mol Ecol. , vol.22 , pp. 3179-3190
    • Arnold, B.1    Corbett-Detig, R.B.2    Hartl, D.3    Bomblies, K.4
  • 4
    • 84865475040 scopus 로고    scopus 로고
    • Improving the accuracy of demographic and molecular clock model comparison while accommodating phylogenetic uncertainty
    • Baele G, et al. 2012. Improving the accuracy of demographic and molecular clock model comparison while accommodating phylogenetic uncertainty. Mol Biol Evol. 29:2157-2167.
    • (2012) Mol Biol Evol. , vol.29 , pp. 2157-2167
    • Baele, G.1
  • 5
    • 84877663836 scopus 로고    scopus 로고
    • Accurate model selection of relaxed molecular clocks in Bayesian phylogenetics
    • Baele G, Li WLS, Drummond AJ, Suchard MA, Lemey P. 2013. Accurate model selection of relaxed molecular clocks in Bayesian phylogenetics. Mol Biol Evol. 30:239-243.
    • (2013) Mol Biol Evol. , vol.30 , pp. 239-243
    • Baele, G.1    Li, W.L.S.2    Drummond, A.J.3    Suchard, M.A.4    Lemey, P.5
  • 6
    • 54449098752 scopus 로고    scopus 로고
    • Rapid SNP discovery and genetic mapping using sequenced RAD markers
    • Baird NA, et al. 2008. Rapid SNP discovery and genetic mapping using sequenced RAD markers. PLoS One 3:e3376.
    • (2008) PLoS One , vol.3 , pp. e3376
    • Baird, N.A.1
  • 7
    • 84905049901 scopus 로고    scopus 로고
    • Trimmomatic: A flexible trimmer for Illumina sequence data
    • Bolger AM, Lohse M, Usadel B. 2014. Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics 30:2114-2120.
    • (2014) Bioinformatics , vol.30 , pp. 2114-2120
    • Bolger, A.M.1    Lohse, M.2    Usadel, B.3
  • 8
    • 84886286947 scopus 로고    scopus 로고
    • Is RAD-seq suitable for phylogenetic inference? An in silico assessment and optimization
    • Cariou M, Duret L, Charlat S. 2013. Is RAD-seq suitable for phylogenetic inference? An in silico assessment and optimization. Ecol Evol. 3:846-852.
    • (2013) Ecol Evol. , vol.3 , pp. 846-852
    • Cariou, M.1    Duret, L.2    Charlat, S.3
  • 10
    • 84917697072 scopus 로고    scopus 로고
    • Quartet inference from SNP data under the coalescent model
    • Chifman J, Kubatko L. 2014. Quartet inference from SNP data under the coalescent model. Bioinformatics 30:3317-3324.
    • (2014) Bioinformatics , vol.30 , pp. 3317-3324
    • Chifman, J.1    Kubatko, L.2
  • 11
    • 84865382153 scopus 로고    scopus 로고
    • More than 1000 ultraconserved elements provide evidence that turtles are the sister group of archosaurs
    • Crawford NG, et al. 2012. More than 1000 ultraconserved elements provide evidence that turtles are the sister group of archosaurs. Biol Lett. 8:783-786.
    • (2012) Biol Lett. , vol.8 , pp. 783-786
    • Crawford, N.G.1
  • 12
    • 84899556177 scopus 로고    scopus 로고
    • Empirical assessment of RAD sequencing for interspecific phylogeny
    • Cruaud A, et al. 2014. Empirical assessment of RAD sequencing for interspecific phylogeny. Mol Biol Evol. 31:1272-1274.
    • (2014) Mol Biol Evol. , vol.31 , pp. 1272-1274
    • Cruaud, A.1
  • 13
    • 79954999839 scopus 로고    scopus 로고
    • RADSeq: Next-generation population genetics
    • Davey JW, Blaxter ML. 2010. RADSeq: next-generation population genetics. Brief Funct Genomics. 9:416-423.
    • (2010) Brief Funct Genomics. , vol.9 , pp. 416-423
    • Davey, J.W.1    Blaxter, M.L.2
  • 14
    • 79959435199 scopus 로고    scopus 로고
    • Genome-wide genetic marker discovery and genotyping using next-generation sequencing
    • Davey JW, et al. 2011. Genome-wide genetic marker discovery and genotyping using next-generation sequencing. Nat Rev Genet. 12:499-510.
    • (2011) Nat Rev Genet. , vol.12 , pp. 499-510
    • Davey, J.W.1
  • 16
    • 38249012503 scopus 로고
    • Phylogenetic relationships and rates of allozyme evolution among the lineages of sceloporine sand lizards
    • De Queiroz K. 1992. Phylogenetic relationships and rates of allozyme evolution among the lineages of sceloporine sand lizards. Biol J Linn Soc. 45:333-362.
    • (1992) Biol J Linn Soc. , vol.45 , pp. 333-362
    • De Queiroz, K.1
  • 17
    • 33646928341 scopus 로고    scopus 로고
    • Discordance of species trees with their most likely gene trees
    • Degnan JH, Rosenberg NA. 2006. Discordance of species trees with their most likely gene trees. PLoS Genet. 2:e68.
    • (2006) PLoS Genet. , vol.2 , pp. e68
    • Degnan, J.H.1    Rosenberg, N.A.2
  • 18
    • 65649131928 scopus 로고    scopus 로고
    • Gene tree discordance, phylogenetic inference, and the multispecies coalescent
    • Degnan JH, Rosenberg NA. 2009. Gene tree discordance, phylogenetic inference, and the multispecies coalescent. Trends Ecol Evol. 24:332-340.
    • (2009) Trends Ecol Evol. , vol.24 , pp. 332-340
    • Degnan, J.H.1    Rosenberg, N.A.2
  • 20
    • 84903726447 scopus 로고    scopus 로고
    • PyRAD: Assembly of de novo RADseq loci for phylogenetic analyses
    • Eaton DAR. 2014. PyRAD: assembly of de novo RADseq loci for phylogenetic analyses. Bioinformatics 30:1844-1849.
    • (2014) Bioinformatics , vol.30 , pp. 1844-1849
    • Eaton, D.A.R.1
  • 21
    • 84881616406 scopus 로고    scopus 로고
    • Inferring phylogeny and introgression using RADseq data: An example from flowering plants (Pedicularis: Orobanchaceae)
    • Eaton DAR, Ree RH. 2013. Inferring phylogeny and introgression using RADseq data: an example from flowering plants (Pedicularis: Orobanchaceae). Syst Biol. 62:689-706.
    • (2013) Syst Biol. , vol.62 , pp. 689-706
    • Eaton, D.A.R.1    Ree, R.H.2
  • 22
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • Edgar RC. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32:1792-1797.
    • (2004) Nucleic Acids Res. , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 23
    • 77957244650 scopus 로고    scopus 로고
    • Search and clustering orders of magnitude faster than BLAST
    • Edgar RC. 2010. Search and clustering orders of magnitude faster than BLAST. Bioinformatics 26:2460-2461.
    • (2010) Bioinformatics , vol.26 , pp. 2460-2461
    • Edgar, R.C.1
  • 26
    • 59849113821 scopus 로고    scopus 로고
    • Solution hybrid selection with ultra-long oligonucleotides for massively parallel targeted sequencing
    • Gnirke A, et al. 2009. Solution hybrid selection with ultra-long oligonucleotides for massively parallel targeted sequencing. Nat Biotechnol. 27:182-189.
    • (2009) Nat Biotechnol. , vol.27 , pp. 182-189
    • Gnirke, A.1
  • 27
    • 84922967995 scopus 로고    scopus 로고
    • Genomic resources notes accepted 1 August 2014-30 September 2014
    • Genomic Resources Development Consortium, et al. 2015. Genomic resources notes accepted 1 August 2014-30 September 2014. Mol Ecol Resour. 15:228-229.
    • (2015) Mol Ecol Resour. , vol.15 , pp. 228-229
    • Genomic Resources Development Consortium1
  • 29
    • 84978916740 scopus 로고    scopus 로고
    • Unforeseen consequences of excluding missing data from next-generation sequences: Simulation study of RAD sequences
    • Advance Access published July 4, 2014
    • Huang H, Knowles LL. 2014. Unforeseen consequences of excluding missing data from next-generation sequences: simulation study of RAD sequences. Syst Biol., Advance Access published July 4, 2014, doi: 10.1093/sysbio/syu046.
    • (2014) Syst Biol.
    • Huang, H.1    Knowles, L.L.2
  • 30
    • 84904118414 scopus 로고    scopus 로고
    • Defining loci in restriction-based reduced representation genomic data from nonmodel species: Sources of bias and diagnostics for optimal clustering
    • Ilut DC, Nydam ML, Hare MP. 2014. Defining loci in restriction-based reduced representation genomic data from nonmodel species: sources of bias and diagnostics for optimal clustering. BioMed Res Int. 2014:675158.
    • (2014) BioMed Res Int. , vol.2014 , pp. 675158
    • Ilut, D.C.1    Nydam, M.L.2    Hare, M.P.3
  • 31
    • 84875619226 scopus 로고    scopus 로고
    • MAFFT multiple sequence alignment software version 7: Improvements in performance and usability
    • Katoh K, Standley DM. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30:772-780.
    • (2013) Mol Biol Evol. , vol.30 , pp. 772-780
    • Katoh, K.1    Standley, D.M.2
  • 32
    • 33847302458 scopus 로고    scopus 로고
    • Inconsistency of phylogenetic estimates from concatenated data under coalescence
    • Kubatko LS, Degnan JH. 2007. Inconsistency of phylogenetic estimates from concatenated data under coalescence. Syst Biol. 56:17-24.
    • (2007) Syst Biol. , vol.56 , pp. 17-24
    • Kubatko, L.S.1    Degnan, J.H.2
  • 33
    • 84883559387 scopus 로고    scopus 로고
    • Evolution of viviparity: A phylogenetic test of the cold-climate hypothesis in phrynosomatid lizards
    • Lambert SM, Wiens JJ. 2013. Evolution of viviparity: a phylogenetic test of the cold-climate hypothesis in phrynosomatid lizards. Evolution 67:2614-2630.
    • (2013) Evolution , vol.67 , pp. 2614-2630
    • Lambert, S.M.1    Wiens, J.J.2
  • 34
    • 84904370094 scopus 로고    scopus 로고
    • A hybrid phylogenetic-phylogenomic approach for species tree estimation in African Agama lizards with applications to biogeography, character evolution, and diversification
    • Leaché AD, et al. 2014. A hybrid phylogenetic-phylogenomic approach for species tree estimation in African Agama lizards with applications to biogeography, character evolution, and diversification. Mol Phylogenet Evol. 79:215-230.
    • (2014) Mol Phylogenet Evol. , vol.79 , pp. 215-230
    • Leaché, A.D.1
  • 35
    • 33646398136 scopus 로고    scopus 로고
    • Phylogenetic relationships of horned lizards (Phrynosoma) based on nuclear and mitochondrial data: Evidence for a misleading mitochondrial gene tree
    • Leaché AD, McGuire JA. 2006. Phylogenetic relationships of horned lizards (Phrynosoma) based on nuclear and mitochondrial data: evidence for a misleading mitochondrial gene tree. Mol Phylogenet Evol. 39:628-644.
    • (2006) Mol Phylogenet Evol. , vol.39 , pp. 628-644
    • Leaché, A.D.1    McGuire, J.A.2
  • 36
    • 79951561454 scopus 로고    scopus 로고
    • The accuracy of species tree estimation under simulation: A comparison of methods
    • Leaché AD, Rannala B. 2011. The accuracy of species tree estimation under simulation: a comparison of methods. Syst Biol. 60:126-137.
    • (2011) Syst Biol. , vol.60 , pp. 126-137
    • Leaché, A.D.1    Rannala, B.2
  • 37
    • 84865266483 scopus 로고    scopus 로고
    • Anchored hybrid enrichment for massively high-throughput phylogenomics
    • Lemmon AR, Emme S, Lemmon EM. 2012. Anchored hybrid enrichment for massively high-throughput phylogenomics. Syst Biol. 61:727-744.
    • (2012) Syst Biol. , vol.61 , pp. 727-744
    • Lemmon, A.R.1    Emme, S.2    Lemmon, E.M.3
  • 39
    • 70349417912 scopus 로고    scopus 로고
    • Phylogenetic analysis in the anomaly zone
    • Liu L, Edwards SV. 2009. Phylogenetic analysis in the anomaly zone. Syst Biol. 58:452-460.
    • (2009) Syst Biol. , vol.58 , pp. 452-460
    • Liu, L.1    Edwards, S.V.2
  • 40
    • 77957686501 scopus 로고    scopus 로고
    • A maximum pseudo-likelihood approach for estimating species trees under the coalescent model
    • Liu L, Yu L, Edwards SV. 2010. A maximum pseudo-likelihood approach for estimating species trees under the coalescent model. BMC Evol Biol. 10:302.
    • (2010) BMC Evol Biol. , vol.10 , pp. 302
    • Liu, L.1    Yu, L.2    Edwards, S.V.3
  • 41
    • 84962465638 scopus 로고    scopus 로고
    • MacManes salt extraction protocol
    • MacManes M. 2013. MacManes salt extraction protocol. Figshare. Available from: http://dx.doi.org/10.6084/m9.figshare.658946.
    • (2013) Figshare.
    • MacManes, M.1
  • 42
    • 77449121614 scopus 로고    scopus 로고
    • Target-enrichment strategies for nextgeneration sequencing
    • Mamanova L, et al. 2010. Target-enrichment strategies for nextgeneration sequencing. Nat Methods. 7:111-118.
    • (2010) Nat Methods. , vol.7 , pp. 111-118
    • Mamanova, L.1
  • 43
    • 84859530730 scopus 로고    scopus 로고
    • Ultraconserved elements are novel phylogenomic markers that resolve placental mammal phylogeny when combined with species-tree analysis
    • McCormack JE, et al. 2012. Ultraconserved elements are novel phylogenomic markers that resolve placental mammal phylogeny when combined with species-tree analysis. Genome Res. 22:746-754.
    • (2012) Genome Res. , vol.22 , pp. 746-754
    • McCormack, J.E.1
  • 44
    • 84873860010 scopus 로고    scopus 로고
    • A phylogeny of birds based on over 1, 500 loci collected by target enrichment and high-throughput sequencing
    • McCormack JE, et al. 2013. A phylogeny of birds based on over 1, 500 loci collected by target enrichment and high-throughput sequencing. PLoS One 8:e54848.
    • (2013) PLoS One , vol.8 , pp. e54848
    • McCormack, J.E.1
  • 45
    • 33846874137 scopus 로고    scopus 로고
    • Rapid and cost-effective polymorphism identification and genotyping using restriction site associated DNA (RAD) markers
    • Miller MR, Dunham JP, Amores A, Cresko WA, Johnson EA. 2007. Rapid and cost-effective polymorphism identification and genotyping using restriction site associated DNA (RAD) markers. Genome Res. 17:240-248.
    • (2007) Genome Res. , vol.17 , pp. 240-248
    • Miller, M.R.1    Dunham, J.P.2    Amores, A.3    Cresko, W.A.4    Johnson, E.A.5
  • 46
    • 70249111091 scopus 로고    scopus 로고
    • Targeted capture and massively parallel sequencing of 12 human exomes
    • Ng SB, et al. 2009. Targeted capture and massively parallel sequencing of 12 human exomes. Nature 461:272-276.
    • (2009) Nature , vol.461 , pp. 272-276
    • Ng, S.B.1
  • 48
  • 49
    • 84861691274 scopus 로고    scopus 로고
    • Double digest RADseq: An inexpensive method for de novo SNP discovery and genotyping in model and non-model species
    • Peterson BK, Weber JN, Kay EH, Fisher HS, Hoekstra HE. 2012. Double digest RADseq: an inexpensive method for de novo SNP discovery and genotyping in model and non-model species. PLoS One 7:e37135.
    • (2012) PLoS One , vol.7 , pp. e37135
    • Peterson, B.K.1    Weber, J.N.2    Kay, E.H.3    Fisher, H.S.4    Hoekstra, H.E.5
  • 50
    • 84919725058 scopus 로고    scopus 로고
    • Demystifying the RAD fad
    • Puritz JB, et al. 2014. Demystifying the RAD fad. Mol Ecol. 23:5937-5942.
    • (2014) Mol Ecol. , vol.23 , pp. 5937-5942
    • Puritz, J.B.1
  • 51
    • 84908603912 scopus 로고    scopus 로고
    • Effectiveness of phylogenomic data and coalescent species-tree methods for resolving difficult nodes in the phylogeny of advanced snakes (Serpentes: Caenophidia)
    • Pyron RA, et al. 2014. Effectiveness of phylogenomic data and coalescent species-tree methods for resolving difficult nodes in the phylogeny of advanced snakes (Serpentes: Caenophidia). Mol Phylogenet Evol. 81:221-231.
    • (2014) Mol Phylogenet Evol. , vol.81 , pp. 221-231
    • Pyron, R.A.1
  • 52
    • 0041817551 scopus 로고    scopus 로고
    • Bayes estimation of species divergence times and ancestral population sizes using DNA sequences from multiple loci
    • Rannala B, Yang Z. 2003. Bayes estimation of species divergence times and ancestral population sizes using DNA sequences from multiple loci. Genetics 164:1645-1656.
    • (2003) Genetics , vol.164 , pp. 1645-1656
    • Rannala, B.1    Yang, Z.2
  • 53
    • 0029314481 scopus 로고
    • Phylogenetic relationships among phyrynosomatid lizards as inferred from mitochondrial ribosomal DNA sequences: Substitutional bias and information content of transitions relative to transversions
    • Reeder TW. 1995. Phylogenetic relationships among phyrynosomatid lizards as inferred from mitochondrial ribosomal DNA sequences: substitutional bias and information content of transitions relative to transversions. Mol Phylogenet Evol. 4:203-222.
    • (1995) Mol Phylogenet Evol. , vol.4 , pp. 203-222
    • Reeder, T.W.1
  • 54
    • 0001995326 scopus 로고    scopus 로고
    • Evolution of the lizard family Phrynosomatidae as inferred from diverse types of data
    • Reeder TW, Wiens JJ. 1996. Evolution of the lizard family Phrynosomatidae as inferred from diverse types of data. Herpetol Monogr. 10:43-84.
    • (1996) Herpetol Monogr. , vol.10 , pp. 43-84
    • Reeder, T.W.1    Wiens, J.J.2
  • 55
    • 84894535457 scopus 로고    scopus 로고
    • Introgression and phenotypic assimilation in Zimmerius flycatchers (Tyrannidae): Population genetic and phylogenetic inferences from genome-wide SNPs
    • Rheindt FE, Fujita MK, Wilton PR, Edwards SV. 2014. Introgression and phenotypic assimilation in Zimmerius flycatchers (Tyrannidae): population genetic and phylogenetic inferences from genome-wide SNPs. Syst Biol. 63:134-152.
    • (2014) Syst Biol. , vol.63 , pp. 134-152
    • Rheindt, F.E.1    Fujita, M.K.2    Wilton, P.R.3    Edwards, S.V.4
  • 56
    • 84860109324 scopus 로고    scopus 로고
    • MrBayes 3.2: Efficient Bayesian phylogenetic inference and model choice across a large model space
    • Ronquist F, et al. 2012. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol. 61:539-542.
    • (2012) Syst Biol. , vol.61 , pp. 539-542
    • Ronquist, F.1
  • 57
    • 84859516080 scopus 로고    scopus 로고
    • Inferring phylogenies from RAD sequence data
    • Rubin BER, Ree RH, Moreau CS. 2012. Inferring phylogenies from RAD sequence data. PLoS One 7:e33394.
    • (2012) PLoS One , vol.7 , pp. e33394
    • Rubin, B.E.R.1    Ree, R.H.2    Moreau, C.S.3
  • 58
    • 0029666941 scopus 로고    scopus 로고
    • The rock-paper-scissors game and the evolution of alternative male strategies
    • Sinervo B, Lively CM. 1996. The rock-paper-scissors game and the evolution of alternative male strategies. Nature 380:240-243.
    • (1996) Nature , vol.380 , pp. 240-243
    • Sinervo, B.1    Lively, C.M.2
  • 59
    • 84891531569 scopus 로고    scopus 로고
    • Target capture and massively parallel sequencing of ultraconserved elements for comparative studies at shallow evolutionary time scales
    • Smith BT, Harvey MG, Faircloth BC, Glenn TC, Brumfield RT. 2014. Target capture and massively parallel sequencing of ultraconserved elements for comparative studies at shallow evolutionary time scales. Syst Biol. 63:83-95.
    • (2014) Syst Biol. , vol.63 , pp. 83-95
    • Smith, B.T.1    Harvey, M.G.2    Faircloth, B.C.3    Glenn, T.C.4    Brumfield, R.T.5
  • 60
    • 83655184666 scopus 로고    scopus 로고
    • Quartet MaxCut: A fast algorithm for amalgamating quartet trees
    • Snir S, Rao S. 2012. Quartet MaxCut: a fast algorithm for amalgamating quartet trees. Mol Phylogenet Evol. 62:1-8.
    • (2012) Mol Phylogenet Evol. , vol.62 , pp. 1-8
    • Snir, S.1    Rao, S.2
  • 61
    • 84899553363 scopus 로고    scopus 로고
    • RAxML version 8: A tool for phylogenetic analysis and post-analysis of large phylogenies
    • Stamatakis A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 30:1312-1313.
    • (2014) Bioinformatics , vol.30 , pp. 1312-1313
    • Stamatakis, A.1
  • 62
    • 77954202497 scopus 로고    scopus 로고
    • Dendropy: A Python library for phylogenetic computing
    • Sukumaran J, Holder MT. 2010. Dendropy: a Python library for phylogenetic computing. Bioinformatics 26:1569-1571.
    • (2010) Bioinformatics , vol.26 , pp. 1569-1571
    • Sukumaran, J.1    Holder, M.T.2
  • 65
    • 84872480881 scopus 로고    scopus 로고
    • Genome-wide RAD sequence data provide unprecedented resolution of species boundaries and relationships in the Lake Victoria cichlid adaptive radiation
    • Wagner CE, et al. 2013. Genome-wide RAD sequence data provide unprecedented resolution of species boundaries and relationships in the Lake Victoria cichlid adaptive radiation. Mol Ecol. 22:787-798.
    • (2013) Mol Ecol. , vol.22 , pp. 787-798
    • Wagner, C.E.1
  • 66
    • 84869787270 scopus 로고    scopus 로고
    • Resolving the phylogeny of lizards and snakes (Squamata) with extensive sampling of genes and species
    • Wiens JJ, et al. 2012. Resolving the phylogeny of lizards and snakes (Squamata) with extensive sampling of genes and species. Biol Lett. 8:1043-1046.
    • (2012) Biol Lett. , vol.8 , pp. 1043-1046
    • Wiens, J.J.1
  • 67
    • 84878655513 scopus 로고    scopus 로고
    • Diversity and niche evolution along aridity gradients in North American lizards (Phrynosomatidae)
    • Wiens JJ, Kozak KH, Silva N. 2013. Diversity and niche evolution along aridity gradients in North American lizards (Phrynosomatidae). Evolution 67:1715-1728.
    • (2013) Evolution , vol.67 , pp. 1715-1728
    • Wiens, J.J.1    Kozak, K.H.2    Silva, N.3
  • 68
    • 70649100018 scopus 로고    scopus 로고
    • Phylogenetic relationships of phrynosomatid lizards based on nuclear and mitochondrial data, and a revised phylogeny for Sceloporus
    • Wiens JJ, Kuczynski CA, Arif S, Reeder TW. 2010. Phylogenetic relationships of phrynosomatid lizards based on nuclear and mitochondrial data, and a revised phylogeny for Sceloporus. Mol Phylogenet Evol. 54:150-161.
    • (2010) Mol Phylogenet Evol. , vol.54 , pp. 150-161
    • Wiens, J.J.1    Kuczynski, C.A.2    Arif, S.3    Reeder, T.W.4
  • 69
    • 0034350323 scopus 로고    scopus 로고
    • Phylogenetic relationships among the phrynosomatid sand lizards inferred from mitochondrial DNA sequences generated by heterogeneous evolutionary processes
    • Wilgenbusch J, De Queiroz K. 2000. Phylogenetic relationships among the phrynosomatid sand lizards inferred from mitochondrial DNA sequences generated by heterogeneous evolutionary processes. Syst Biol. 49:592-612.
    • (2000) Syst Biol. , vol.49 , pp. 592-612
    • Wilgenbusch, J.1    De Queiroz, K.2
  • 70
    • 84922661213 scopus 로고    scopus 로고
    • Unguided species delimitation using DNA sequence data from multiple loci
    • Yang Z, Rannala B. 2014. Unguided species delimitation using DNA sequence data from multiple loci. Mol Biol Evol. 31:3125-3135.
    • (2014) Mol Biol Evol. , vol.31 , pp. 3125-3135
    • Yang, Z.1    Rannala, B.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.