-
1
-
-
80053359585
-
The genome of the green anole lizard and a comparative analysis with birds and mammals
-
Alföldi J, et al. 2011. The genome of the green anole lizard and a comparative analysis with birds and mammals. Nature 477:587-591.
-
(2011)
Nature
, vol.477
, pp. 587-591
-
-
Alföldi, J.1
-
2
-
-
84919752971
-
Trade-offs and utility of alternative RADseq methods
-
Andrews KR, et al. 2014. Trade-offs and utility of alternative RADseq methods. Mol Ecol. 23:5943-5946.
-
(2014)
Mol Ecol.
, vol.23
, pp. 5943-5946
-
-
Andrews, K.R.1
-
3
-
-
84878449439
-
RADseq underestimates diversity and introduces genealogical biases due to nonrandom haplotype sampling
-
Arnold B, Corbett-Detig RB, Hartl D, Bomblies K. 2013. RADseq underestimates diversity and introduces genealogical biases due to nonrandom haplotype sampling. Mol Ecol. 22:3179-3190.
-
(2013)
Mol Ecol.
, vol.22
, pp. 3179-3190
-
-
Arnold, B.1
Corbett-Detig, R.B.2
Hartl, D.3
Bomblies, K.4
-
4
-
-
84865475040
-
Improving the accuracy of demographic and molecular clock model comparison while accommodating phylogenetic uncertainty
-
Baele G, et al. 2012. Improving the accuracy of demographic and molecular clock model comparison while accommodating phylogenetic uncertainty. Mol Biol Evol. 29:2157-2167.
-
(2012)
Mol Biol Evol.
, vol.29
, pp. 2157-2167
-
-
Baele, G.1
-
5
-
-
84877663836
-
Accurate model selection of relaxed molecular clocks in Bayesian phylogenetics
-
Baele G, Li WLS, Drummond AJ, Suchard MA, Lemey P. 2013. Accurate model selection of relaxed molecular clocks in Bayesian phylogenetics. Mol Biol Evol. 30:239-243.
-
(2013)
Mol Biol Evol.
, vol.30
, pp. 239-243
-
-
Baele, G.1
Li, W.L.S.2
Drummond, A.J.3
Suchard, M.A.4
Lemey, P.5
-
6
-
-
54449098752
-
Rapid SNP discovery and genetic mapping using sequenced RAD markers
-
Baird NA, et al. 2008. Rapid SNP discovery and genetic mapping using sequenced RAD markers. PLoS One 3:e3376.
-
(2008)
PLoS One
, vol.3
, pp. e3376
-
-
Baird, N.A.1
-
7
-
-
84905049901
-
Trimmomatic: A flexible trimmer for Illumina sequence data
-
Bolger AM, Lohse M, Usadel B. 2014. Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics 30:2114-2120.
-
(2014)
Bioinformatics
, vol.30
, pp. 2114-2120
-
-
Bolger, A.M.1
Lohse, M.2
Usadel, B.3
-
8
-
-
84886286947
-
Is RAD-seq suitable for phylogenetic inference? An in silico assessment and optimization
-
Cariou M, Duret L, Charlat S. 2013. Is RAD-seq suitable for phylogenetic inference? An in silico assessment and optimization. Ecol Evol. 3:846-852.
-
(2013)
Ecol Evol.
, vol.3
, pp. 846-852
-
-
Cariou, M.1
Duret, L.2
Charlat, S.3
-
9
-
-
84878461613
-
Stacks: An analysis tool set for population genomics
-
Catchen J, Hohenlohe PA, Bassham S, Amores A, Cresko WA. 2013. Stacks: an analysis tool set for population genomics. Mol Ecol. 22:3124-3140.
-
(2013)
Mol Ecol.
, vol.22
, pp. 3124-3140
-
-
Catchen, J.1
Hohenlohe, P.A.2
Bassham, S.3
Amores, A.4
Cresko, W.A.5
-
10
-
-
84917697072
-
Quartet inference from SNP data under the coalescent model
-
Chifman J, Kubatko L. 2014. Quartet inference from SNP data under the coalescent model. Bioinformatics 30:3317-3324.
-
(2014)
Bioinformatics
, vol.30
, pp. 3317-3324
-
-
Chifman, J.1
Kubatko, L.2
-
11
-
-
84865382153
-
More than 1000 ultraconserved elements provide evidence that turtles are the sister group of archosaurs
-
Crawford NG, et al. 2012. More than 1000 ultraconserved elements provide evidence that turtles are the sister group of archosaurs. Biol Lett. 8:783-786.
-
(2012)
Biol Lett.
, vol.8
, pp. 783-786
-
-
Crawford, N.G.1
-
12
-
-
84899556177
-
Empirical assessment of RAD sequencing for interspecific phylogeny
-
Cruaud A, et al. 2014. Empirical assessment of RAD sequencing for interspecific phylogeny. Mol Biol Evol. 31:1272-1274.
-
(2014)
Mol Biol Evol.
, vol.31
, pp. 1272-1274
-
-
Cruaud, A.1
-
13
-
-
79954999839
-
RADSeq: Next-generation population genetics
-
Davey JW, Blaxter ML. 2010. RADSeq: next-generation population genetics. Brief Funct Genomics. 9:416-423.
-
(2010)
Brief Funct Genomics.
, vol.9
, pp. 416-423
-
-
Davey, J.W.1
Blaxter, M.L.2
-
14
-
-
79959435199
-
Genome-wide genetic marker discovery and genotyping using next-generation sequencing
-
Davey JW, et al. 2011. Genome-wide genetic marker discovery and genotyping using next-generation sequencing. Nat Rev Genet. 12:499-510.
-
(2011)
Nat Rev Genet.
, vol.12
, pp. 499-510
-
-
Davey, J.W.1
-
16
-
-
38249012503
-
Phylogenetic relationships and rates of allozyme evolution among the lineages of sceloporine sand lizards
-
De Queiroz K. 1992. Phylogenetic relationships and rates of allozyme evolution among the lineages of sceloporine sand lizards. Biol J Linn Soc. 45:333-362.
-
(1992)
Biol J Linn Soc.
, vol.45
, pp. 333-362
-
-
De Queiroz, K.1
-
17
-
-
33646928341
-
Discordance of species trees with their most likely gene trees
-
Degnan JH, Rosenberg NA. 2006. Discordance of species trees with their most likely gene trees. PLoS Genet. 2:e68.
-
(2006)
PLoS Genet.
, vol.2
, pp. e68
-
-
Degnan, J.H.1
Rosenberg, N.A.2
-
18
-
-
65649131928
-
Gene tree discordance, phylogenetic inference, and the multispecies coalescent
-
Degnan JH, Rosenberg NA. 2009. Gene tree discordance, phylogenetic inference, and the multispecies coalescent. Trends Ecol Evol. 24:332-340.
-
(2009)
Trends Ecol Evol.
, vol.24
, pp. 332-340
-
-
Degnan, J.H.1
Rosenberg, N.A.2
-
20
-
-
84903726447
-
PyRAD: Assembly of de novo RADseq loci for phylogenetic analyses
-
Eaton DAR. 2014. PyRAD: assembly of de novo RADseq loci for phylogenetic analyses. Bioinformatics 30:1844-1849.
-
(2014)
Bioinformatics
, vol.30
, pp. 1844-1849
-
-
Eaton, D.A.R.1
-
21
-
-
84881616406
-
Inferring phylogeny and introgression using RADseq data: An example from flowering plants (Pedicularis: Orobanchaceae)
-
Eaton DAR, Ree RH. 2013. Inferring phylogeny and introgression using RADseq data: an example from flowering plants (Pedicularis: Orobanchaceae). Syst Biol. 62:689-706.
-
(2013)
Syst Biol.
, vol.62
, pp. 689-706
-
-
Eaton, D.A.R.1
Ree, R.H.2
-
22
-
-
3042666256
-
MUSCLE: Multiple sequence alignment with high accuracy and high throughput
-
Edgar RC. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32:1792-1797.
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 1792-1797
-
-
Edgar, R.C.1
-
23
-
-
77957244650
-
Search and clustering orders of magnitude faster than BLAST
-
Edgar RC. 2010. Search and clustering orders of magnitude faster than BLAST. Bioinformatics 26:2460-2461.
-
(2010)
Bioinformatics
, vol.26
, pp. 2460-2461
-
-
Edgar, R.C.1
-
24
-
-
77958007159
-
Resolving postglacial phylogeography using high-throughput sequencing
-
Emerson KJ, Merz CR, Catchen JM, Hohenlohe PA, Cresko WA, Bradshaw WE, Holzapfel CM. 2010. Resolving postglacial phylogeography using high-throughput sequencing. Proc Natl Acad Sci U S A. 107:16196-16200.
-
(2010)
Proc Natl Acad Sci U S A.
, vol.107
, pp. 16196-16200
-
-
Emerson, K.J.1
Merz, C.R.2
Catchen, J.M.3
Hohenlohe, P.A.4
Cresko, W.A.5
Bradshaw, W.E.6
Holzapfel, C.M.7
-
25
-
-
84859548731
-
Ultraconserved elements anchor thousands of genetic markers spanning multiple evolutionary timescales
-
Faircloth BC, McCormack JE, Crawford NG, Harvey MG, Brumfield RT, Glenn TC. 2012. Ultraconserved elements anchor thousands of genetic markers spanning multiple evolutionary timescales. Syst Biol. 61:717-726.
-
(2012)
Syst Biol.
, vol.61
, pp. 717-726
-
-
Faircloth, B.C.1
McCormack, J.E.2
Crawford, N.G.3
Harvey, M.G.4
Brumfield, R.T.5
Glenn, T.C.6
-
26
-
-
59849113821
-
Solution hybrid selection with ultra-long oligonucleotides for massively parallel targeted sequencing
-
Gnirke A, et al. 2009. Solution hybrid selection with ultra-long oligonucleotides for massively parallel targeted sequencing. Nat Biotechnol. 27:182-189.
-
(2009)
Nat Biotechnol.
, vol.27
, pp. 182-189
-
-
Gnirke, A.1
-
27
-
-
84922967995
-
Genomic resources notes accepted 1 August 2014-30 September 2014
-
Genomic Resources Development Consortium, et al. 2015. Genomic resources notes accepted 1 August 2014-30 September 2014. Mol Ecol Resour. 15:228-229.
-
(2015)
Mol Ecol Resour.
, vol.15
, pp. 228-229
-
-
Genomic Resources Development Consortium1
-
29
-
-
84978916740
-
Unforeseen consequences of excluding missing data from next-generation sequences: Simulation study of RAD sequences
-
Advance Access published July 4, 2014
-
Huang H, Knowles LL. 2014. Unforeseen consequences of excluding missing data from next-generation sequences: simulation study of RAD sequences. Syst Biol., Advance Access published July 4, 2014, doi: 10.1093/sysbio/syu046.
-
(2014)
Syst Biol.
-
-
Huang, H.1
Knowles, L.L.2
-
30
-
-
84904118414
-
Defining loci in restriction-based reduced representation genomic data from nonmodel species: Sources of bias and diagnostics for optimal clustering
-
Ilut DC, Nydam ML, Hare MP. 2014. Defining loci in restriction-based reduced representation genomic data from nonmodel species: sources of bias and diagnostics for optimal clustering. BioMed Res Int. 2014:675158.
-
(2014)
BioMed Res Int.
, vol.2014
, pp. 675158
-
-
Ilut, D.C.1
Nydam, M.L.2
Hare, M.P.3
-
31
-
-
84875619226
-
MAFFT multiple sequence alignment software version 7: Improvements in performance and usability
-
Katoh K, Standley DM. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30:772-780.
-
(2013)
Mol Biol Evol.
, vol.30
, pp. 772-780
-
-
Katoh, K.1
Standley, D.M.2
-
32
-
-
33847302458
-
Inconsistency of phylogenetic estimates from concatenated data under coalescence
-
Kubatko LS, Degnan JH. 2007. Inconsistency of phylogenetic estimates from concatenated data under coalescence. Syst Biol. 56:17-24.
-
(2007)
Syst Biol.
, vol.56
, pp. 17-24
-
-
Kubatko, L.S.1
Degnan, J.H.2
-
33
-
-
84883559387
-
Evolution of viviparity: A phylogenetic test of the cold-climate hypothesis in phrynosomatid lizards
-
Lambert SM, Wiens JJ. 2013. Evolution of viviparity: a phylogenetic test of the cold-climate hypothesis in phrynosomatid lizards. Evolution 67:2614-2630.
-
(2013)
Evolution
, vol.67
, pp. 2614-2630
-
-
Lambert, S.M.1
Wiens, J.J.2
-
34
-
-
84904370094
-
A hybrid phylogenetic-phylogenomic approach for species tree estimation in African Agama lizards with applications to biogeography, character evolution, and diversification
-
Leaché AD, et al. 2014. A hybrid phylogenetic-phylogenomic approach for species tree estimation in African Agama lizards with applications to biogeography, character evolution, and diversification. Mol Phylogenet Evol. 79:215-230.
-
(2014)
Mol Phylogenet Evol.
, vol.79
, pp. 215-230
-
-
Leaché, A.D.1
-
35
-
-
33646398136
-
Phylogenetic relationships of horned lizards (Phrynosoma) based on nuclear and mitochondrial data: Evidence for a misleading mitochondrial gene tree
-
Leaché AD, McGuire JA. 2006. Phylogenetic relationships of horned lizards (Phrynosoma) based on nuclear and mitochondrial data: evidence for a misleading mitochondrial gene tree. Mol Phylogenet Evol. 39:628-644.
-
(2006)
Mol Phylogenet Evol.
, vol.39
, pp. 628-644
-
-
Leaché, A.D.1
McGuire, J.A.2
-
36
-
-
79951561454
-
The accuracy of species tree estimation under simulation: A comparison of methods
-
Leaché AD, Rannala B. 2011. The accuracy of species tree estimation under simulation: a comparison of methods. Syst Biol. 60:126-137.
-
(2011)
Syst Biol.
, vol.60
, pp. 126-137
-
-
Leaché, A.D.1
Rannala, B.2
-
37
-
-
84865266483
-
Anchored hybrid enrichment for massively high-throughput phylogenomics
-
Lemmon AR, Emme S, Lemmon EM. 2012. Anchored hybrid enrichment for massively high-throughput phylogenomics. Syst Biol. 61:727-744.
-
(2012)
Syst Biol.
, vol.61
, pp. 727-744
-
-
Lemmon, A.R.1
Emme, S.2
Lemmon, E.M.3
-
38
-
-
84878973869
-
Capturing protein-coding genes across highly divergent species
-
Li C, Hofreiter M, Straube N, Corrigan S, Naylor GJP. 2013. Capturing protein-coding genes across highly divergent species. Biotechniques 54:321-326.
-
(2013)
Biotechniques
, vol.54
, pp. 321-326
-
-
Li, C.1
Hofreiter, M.2
Straube, N.3
Corrigan, S.4
Naylor, G.J.P.5
-
39
-
-
70349417912
-
Phylogenetic analysis in the anomaly zone
-
Liu L, Edwards SV. 2009. Phylogenetic analysis in the anomaly zone. Syst Biol. 58:452-460.
-
(2009)
Syst Biol.
, vol.58
, pp. 452-460
-
-
Liu, L.1
Edwards, S.V.2
-
40
-
-
77957686501
-
A maximum pseudo-likelihood approach for estimating species trees under the coalescent model
-
Liu L, Yu L, Edwards SV. 2010. A maximum pseudo-likelihood approach for estimating species trees under the coalescent model. BMC Evol Biol. 10:302.
-
(2010)
BMC Evol Biol.
, vol.10
, pp. 302
-
-
Liu, L.1
Yu, L.2
Edwards, S.V.3
-
41
-
-
84962465638
-
MacManes salt extraction protocol
-
MacManes M. 2013. MacManes salt extraction protocol. Figshare. Available from: http://dx.doi.org/10.6084/m9.figshare.658946.
-
(2013)
Figshare.
-
-
MacManes, M.1
-
42
-
-
77449121614
-
Target-enrichment strategies for nextgeneration sequencing
-
Mamanova L, et al. 2010. Target-enrichment strategies for nextgeneration sequencing. Nat Methods. 7:111-118.
-
(2010)
Nat Methods.
, vol.7
, pp. 111-118
-
-
Mamanova, L.1
-
43
-
-
84859530730
-
Ultraconserved elements are novel phylogenomic markers that resolve placental mammal phylogeny when combined with species-tree analysis
-
McCormack JE, et al. 2012. Ultraconserved elements are novel phylogenomic markers that resolve placental mammal phylogeny when combined with species-tree analysis. Genome Res. 22:746-754.
-
(2012)
Genome Res.
, vol.22
, pp. 746-754
-
-
McCormack, J.E.1
-
44
-
-
84873860010
-
A phylogeny of birds based on over 1, 500 loci collected by target enrichment and high-throughput sequencing
-
McCormack JE, et al. 2013. A phylogeny of birds based on over 1, 500 loci collected by target enrichment and high-throughput sequencing. PLoS One 8:e54848.
-
(2013)
PLoS One
, vol.8
, pp. e54848
-
-
McCormack, J.E.1
-
45
-
-
33846874137
-
Rapid and cost-effective polymorphism identification and genotyping using restriction site associated DNA (RAD) markers
-
Miller MR, Dunham JP, Amores A, Cresko WA, Johnson EA. 2007. Rapid and cost-effective polymorphism identification and genotyping using restriction site associated DNA (RAD) markers. Genome Res. 17:240-248.
-
(2007)
Genome Res.
, vol.17
, pp. 240-248
-
-
Miller, M.R.1
Dunham, J.P.2
Amores, A.3
Cresko, W.A.4
Johnson, E.A.5
-
46
-
-
70249111091
-
Targeted capture and massively parallel sequencing of 12 human exomes
-
Ng SB, et al. 2009. Targeted capture and massively parallel sequencing of 12 human exomes. Nature 461:272-276.
-
(2009)
Nature
, vol.461
, pp. 272-276
-
-
Ng, S.B.1
-
47
-
-
77950820827
-
How many bootstrap replicates are necessary?
-
Pattengale ND, Alipour M, Bininda-Emonds ORP, Moret BME, Stamatakis A. 2010. How many bootstrap replicates are necessary? J Comput Biol. 17:337-354.
-
(2010)
J Comput Biol.
, vol.17
, pp. 337-354
-
-
Pattengale, N.D.1
Alipour, M.2
Bininda-Emonds, O.R.P.3
Moret, B.M.E.4
Stamatakis, A.5
-
49
-
-
84861691274
-
Double digest RADseq: An inexpensive method for de novo SNP discovery and genotyping in model and non-model species
-
Peterson BK, Weber JN, Kay EH, Fisher HS, Hoekstra HE. 2012. Double digest RADseq: an inexpensive method for de novo SNP discovery and genotyping in model and non-model species. PLoS One 7:e37135.
-
(2012)
PLoS One
, vol.7
, pp. e37135
-
-
Peterson, B.K.1
Weber, J.N.2
Kay, E.H.3
Fisher, H.S.4
Hoekstra, H.E.5
-
50
-
-
84919725058
-
Demystifying the RAD fad
-
Puritz JB, et al. 2014. Demystifying the RAD fad. Mol Ecol. 23:5937-5942.
-
(2014)
Mol Ecol.
, vol.23
, pp. 5937-5942
-
-
Puritz, J.B.1
-
51
-
-
84908603912
-
Effectiveness of phylogenomic data and coalescent species-tree methods for resolving difficult nodes in the phylogeny of advanced snakes (Serpentes: Caenophidia)
-
Pyron RA, et al. 2014. Effectiveness of phylogenomic data and coalescent species-tree methods for resolving difficult nodes in the phylogeny of advanced snakes (Serpentes: Caenophidia). Mol Phylogenet Evol. 81:221-231.
-
(2014)
Mol Phylogenet Evol.
, vol.81
, pp. 221-231
-
-
Pyron, R.A.1
-
52
-
-
0041817551
-
Bayes estimation of species divergence times and ancestral population sizes using DNA sequences from multiple loci
-
Rannala B, Yang Z. 2003. Bayes estimation of species divergence times and ancestral population sizes using DNA sequences from multiple loci. Genetics 164:1645-1656.
-
(2003)
Genetics
, vol.164
, pp. 1645-1656
-
-
Rannala, B.1
Yang, Z.2
-
53
-
-
0029314481
-
Phylogenetic relationships among phyrynosomatid lizards as inferred from mitochondrial ribosomal DNA sequences: Substitutional bias and information content of transitions relative to transversions
-
Reeder TW. 1995. Phylogenetic relationships among phyrynosomatid lizards as inferred from mitochondrial ribosomal DNA sequences: substitutional bias and information content of transitions relative to transversions. Mol Phylogenet Evol. 4:203-222.
-
(1995)
Mol Phylogenet Evol.
, vol.4
, pp. 203-222
-
-
Reeder, T.W.1
-
54
-
-
0001995326
-
Evolution of the lizard family Phrynosomatidae as inferred from diverse types of data
-
Reeder TW, Wiens JJ. 1996. Evolution of the lizard family Phrynosomatidae as inferred from diverse types of data. Herpetol Monogr. 10:43-84.
-
(1996)
Herpetol Monogr.
, vol.10
, pp. 43-84
-
-
Reeder, T.W.1
Wiens, J.J.2
-
55
-
-
84894535457
-
Introgression and phenotypic assimilation in Zimmerius flycatchers (Tyrannidae): Population genetic and phylogenetic inferences from genome-wide SNPs
-
Rheindt FE, Fujita MK, Wilton PR, Edwards SV. 2014. Introgression and phenotypic assimilation in Zimmerius flycatchers (Tyrannidae): population genetic and phylogenetic inferences from genome-wide SNPs. Syst Biol. 63:134-152.
-
(2014)
Syst Biol.
, vol.63
, pp. 134-152
-
-
Rheindt, F.E.1
Fujita, M.K.2
Wilton, P.R.3
Edwards, S.V.4
-
56
-
-
84860109324
-
MrBayes 3.2: Efficient Bayesian phylogenetic inference and model choice across a large model space
-
Ronquist F, et al. 2012. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol. 61:539-542.
-
(2012)
Syst Biol.
, vol.61
, pp. 539-542
-
-
Ronquist, F.1
-
57
-
-
84859516080
-
Inferring phylogenies from RAD sequence data
-
Rubin BER, Ree RH, Moreau CS. 2012. Inferring phylogenies from RAD sequence data. PLoS One 7:e33394.
-
(2012)
PLoS One
, vol.7
, pp. e33394
-
-
Rubin, B.E.R.1
Ree, R.H.2
Moreau, C.S.3
-
58
-
-
0029666941
-
The rock-paper-scissors game and the evolution of alternative male strategies
-
Sinervo B, Lively CM. 1996. The rock-paper-scissors game and the evolution of alternative male strategies. Nature 380:240-243.
-
(1996)
Nature
, vol.380
, pp. 240-243
-
-
Sinervo, B.1
Lively, C.M.2
-
59
-
-
84891531569
-
Target capture and massively parallel sequencing of ultraconserved elements for comparative studies at shallow evolutionary time scales
-
Smith BT, Harvey MG, Faircloth BC, Glenn TC, Brumfield RT. 2014. Target capture and massively parallel sequencing of ultraconserved elements for comparative studies at shallow evolutionary time scales. Syst Biol. 63:83-95.
-
(2014)
Syst Biol.
, vol.63
, pp. 83-95
-
-
Smith, B.T.1
Harvey, M.G.2
Faircloth, B.C.3
Glenn, T.C.4
Brumfield, R.T.5
-
60
-
-
83655184666
-
Quartet MaxCut: A fast algorithm for amalgamating quartet trees
-
Snir S, Rao S. 2012. Quartet MaxCut: a fast algorithm for amalgamating quartet trees. Mol Phylogenet Evol. 62:1-8.
-
(2012)
Mol Phylogenet Evol.
, vol.62
, pp. 1-8
-
-
Snir, S.1
Rao, S.2
-
61
-
-
84899553363
-
RAxML version 8: A tool for phylogenetic analysis and post-analysis of large phylogenies
-
Stamatakis A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 30:1312-1313.
-
(2014)
Bioinformatics
, vol.30
, pp. 1312-1313
-
-
Stamatakis, A.1
-
62
-
-
77954202497
-
Dendropy: A Python library for phylogenetic computing
-
Sukumaran J, Holder MT. 2010. Dendropy: a Python library for phylogenetic computing. Bioinformatics 26:1569-1571.
-
(2010)
Bioinformatics
, vol.26
, pp. 1569-1571
-
-
Sukumaran, J.1
Holder, M.T.2
-
65
-
-
84872480881
-
Genome-wide RAD sequence data provide unprecedented resolution of species boundaries and relationships in the Lake Victoria cichlid adaptive radiation
-
Wagner CE, et al. 2013. Genome-wide RAD sequence data provide unprecedented resolution of species boundaries and relationships in the Lake Victoria cichlid adaptive radiation. Mol Ecol. 22:787-798.
-
(2013)
Mol Ecol.
, vol.22
, pp. 787-798
-
-
Wagner, C.E.1
-
66
-
-
84869787270
-
Resolving the phylogeny of lizards and snakes (Squamata) with extensive sampling of genes and species
-
Wiens JJ, et al. 2012. Resolving the phylogeny of lizards and snakes (Squamata) with extensive sampling of genes and species. Biol Lett. 8:1043-1046.
-
(2012)
Biol Lett.
, vol.8
, pp. 1043-1046
-
-
Wiens, J.J.1
-
67
-
-
84878655513
-
Diversity and niche evolution along aridity gradients in North American lizards (Phrynosomatidae)
-
Wiens JJ, Kozak KH, Silva N. 2013. Diversity and niche evolution along aridity gradients in North American lizards (Phrynosomatidae). Evolution 67:1715-1728.
-
(2013)
Evolution
, vol.67
, pp. 1715-1728
-
-
Wiens, J.J.1
Kozak, K.H.2
Silva, N.3
-
68
-
-
70649100018
-
Phylogenetic relationships of phrynosomatid lizards based on nuclear and mitochondrial data, and a revised phylogeny for Sceloporus
-
Wiens JJ, Kuczynski CA, Arif S, Reeder TW. 2010. Phylogenetic relationships of phrynosomatid lizards based on nuclear and mitochondrial data, and a revised phylogeny for Sceloporus. Mol Phylogenet Evol. 54:150-161.
-
(2010)
Mol Phylogenet Evol.
, vol.54
, pp. 150-161
-
-
Wiens, J.J.1
Kuczynski, C.A.2
Arif, S.3
Reeder, T.W.4
-
69
-
-
0034350323
-
Phylogenetic relationships among the phrynosomatid sand lizards inferred from mitochondrial DNA sequences generated by heterogeneous evolutionary processes
-
Wilgenbusch J, De Queiroz K. 2000. Phylogenetic relationships among the phrynosomatid sand lizards inferred from mitochondrial DNA sequences generated by heterogeneous evolutionary processes. Syst Biol. 49:592-612.
-
(2000)
Syst Biol.
, vol.49
, pp. 592-612
-
-
Wilgenbusch, J.1
De Queiroz, K.2
-
70
-
-
84922661213
-
Unguided species delimitation using DNA sequence data from multiple loci
-
Yang Z, Rannala B. 2014. Unguided species delimitation using DNA sequence data from multiple loci. Mol Biol Evol. 31:3125-3135.
-
(2014)
Mol Biol Evol.
, vol.31
, pp. 3125-3135
-
-
Yang, Z.1
Rannala, B.2
|