-
1
-
-
84891535143
-
Next-generation sequencing for molecular ecology: A caveat regarding pooled samples
-
Anderson EC, Skaug HJ, Barshis DJ, (2014) Next-generation sequencing for molecular ecology: a caveat regarding pooled samples. Molecular Ecology, 23, 502-512.
-
(2014)
Molecular Ecology
, vol.23
, pp. 502-512
-
-
Anderson, E.C.1
Skaug, H.J.2
Barshis, D.J.3
-
2
-
-
84896902748
-
Recent novel approaches for population genomics data analysis
-
Andrews KR, Luikart G, (2014) Recent novel approaches for population genomics data analysis. Molecular Ecology, 23, 1661-1667.
-
(2014)
Molecular Ecology
, vol.23
, pp. 1661-1667
-
-
Andrews, K.R.1
Luikart, G.2
-
3
-
-
84878449439
-
RADseq underestimates diversity and introduces genealogical biases due to nonrandom haplotype sampling
-
Arnold B, Corbett-Detig RB, Hartl D, Bomblies K, (2013) RADseq underestimates diversity and introduces genealogical biases due to nonrandom haplotype sampling. Molecular Ecology, 22, 3179-3190.
-
(2013)
Molecular Ecology
, vol.22
, pp. 3179-3190
-
-
Arnold, B.1
Corbett-Detig, R.B.2
Hartl, D.3
Bomblies, K.4
-
4
-
-
54449098752
-
Rapid SNP discovery and genetic mapping using sequenced RAD markers
-
Baird NA, Etter PD, Atwood TS, et al,. (2008) Rapid SNP discovery and genetic mapping using sequenced RAD markers. PLoS One, 3, e3376.
-
(2008)
PLoS One
, vol.3
, pp. e3376
-
-
Baird, N.A.1
Etter, P.D.2
Atwood, T.S.3
-
5
-
-
79960226263
-
A method for counting PCR template molecules with application to next-generation sequencing
-
Casbon JA, Osborne RJ, Brenner S, Lichtenstein CP, (2011) A method for counting PCR template molecules with application to next-generation sequencing. Nucleic Acids Research, 39, 1-8.
-
(2011)
Nucleic Acids Research
, vol.39
, pp. 1-8
-
-
Casbon, J.A.1
Osborne, R.J.2
Brenner, S.3
Lichtenstein, C.P.4
-
6
-
-
79959435199
-
Genome-wide genetic marker discovery and genotyping using next-generation sequencing
-
Davey JW, Hohenlohe PA, Etter PD, et al,. (2011) Genome-wide genetic marker discovery and genotyping using next-generation sequencing. Nature Reviews Genetics, 12, 499-510.
-
(2011)
Nature Reviews Genetics
, vol.12
, pp. 499-510
-
-
Davey, J.W.1
Hohenlohe, P.A.2
Etter, P.D.3
-
7
-
-
84878461117
-
Special features of RAD Sequencing data: Implications for genotyping
-
Davey JW, Cezard T, Fuentes-Utrilla P, et al,. (2013) Special features of RAD Sequencing data: implications for genotyping. Molecular Ecology, 22, 3151-3164.
-
(2013)
Molecular Ecology
, vol.22
, pp. 3151-3164
-
-
Davey, J.W.1
Cezard, T.2
Fuentes-Utrilla, P.3
-
8
-
-
79955783956
-
A robust, simple Genotyping-by-Sequencing (GBS) approach for high diversity species
-
Elshire RJ, Glaubitz JC, Sun Q, et al,. (2011) A robust, simple Genotyping-by-Sequencing (GBS) approach for high diversity species. PLoS ONE, 6, e19379.
-
(2011)
PLoS ONE
, vol.6
, pp. e19379
-
-
Elshire, R.J.1
Glaubitz, J.C.2
Sun, Q.3
-
9
-
-
84887318282
-
Population genomics from pool sequencing
-
Ferretti L, Ramos-Onsins SE, Perez-Enciso M, (2013) Population genomics from pool sequencing. Molecular Ecology, 22, 5561-5576.
-
(2013)
Molecular Ecology
, vol.22
, pp. 5561-5576
-
-
Ferretti, L.1
Ramos-Onsins, S.E.2
Perez-Enciso, M.3
-
10
-
-
78751665708
-
The next generation of molecular markers from massively parallel sequencing of pooled DNA samples
-
Futschik A, Schlöetterer C, (2010) The next generation of molecular markers from massively parallel sequencing of pooled DNA samples. Genetics, 186, 207-218.
-
(2010)
Genetics
, vol.186
, pp. 207-218
-
-
Futschik, A.1
Schlöetterer, C.2
-
11
-
-
84880173092
-
Estimation of population allele frequencies from next-generation sequencing data: Pool-versus individual-based genotyping
-
Gautier M, Foucaud J, Gharbi K, et al,. (2013a) Estimation of population allele frequencies from next-generation sequencing data: Pool-versus individual-based genotyping. Molecular Ecology, 22, 3766-3779.
-
(2013)
Molecular Ecology
, vol.22
, pp. 3766-3779
-
-
Gautier, M.1
Foucaud, J.2
Gharbi, K.3
-
12
-
-
84878430432
-
The effect of RAD allele dropout on the estimation of genetic variation within and between populations
-
Gautier M, Gharbi K, Cezard T, et al,. (2013b) The effect of RAD allele dropout on the estimation of genetic variation within and between populations. Molecular Ecology, 22, 3165-3178.
-
(2013)
Molecular Ecology
, vol.22
, pp. 3165-3178
-
-
Gautier, M.1
Gharbi, K.2
Cezard, T.3
-
13
-
-
84878460644
-
Genomic patterns of introgression in rainbow and westslope cutthroat trout illuminated by overlapping paired-end RAD sequencing
-
Hohenlohe PA, Day MD, Amish SJ, et al,. (2013) Genomic patterns of introgression in rainbow and westslope cutthroat trout illuminated by overlapping paired-end RAD sequencing. Molecular Ecology, 22, 3002-3013.
-
(2013)
Molecular Ecology
, vol.22
, pp. 3002-3013
-
-
Hohenlohe, P.A.1
Day, M.D.2
Amish, S.J.3
-
14
-
-
0038586483
-
A genome scan to detect candidate regions influenced by local natural selection in human populations
-
Kayser M, Brauer S, Stoneking M, (2003) A genome scan to detect candidate regions influenced by local natural selection in human populations. Molecular Biology and Evolution, 20, 893-900.
-
(2003)
Molecular Biology and Evolution
, vol.20
, pp. 893-900
-
-
Kayser, M.1
Brauer, S.2
Stoneking, M.3
-
15
-
-
84902964148
-
Population-genetic inference from pooled-sequencing data
-
Lynch M, Bost D, Wilson S, Maruki T, Harrison S, (2014) Population-genetic inference from pooled-sequencing data. Genome Biology and Evolution, 6, 1210-1218.
-
(2014)
Genome Biology and Evolution
, vol.6
, pp. 1210-1218
-
-
Lynch, M.1
Bost, D.2
Wilson, S.3
Maruki, T.4
Harrison, S.5
-
16
-
-
33846874137
-
Rapid and cost-effective polymorphism identification and genotyping using restriction site associated DNA (RAD) markers
-
Miller MR, Dunham JP, Amores A, Cresko WA, Johnson EA, (2007) Rapid and cost-effective polymorphism identification and genotyping using restriction site associated DNA (RAD) markers. Genome Research, 17, 240-248.
-
(2007)
Genome Research
, vol.17
, pp. 240-248
-
-
Miller, M.R.1
Dunham, J.P.2
Amores, A.3
Cresko, W.A.4
Johnson, E.A.5
-
17
-
-
27544437635
-
Genomic scans for selective sweeps using SNP data
-
Nielsen R, Williamson S, Kim Y, et al,. (2005) Genomic scans for selective sweeps using SNP data. Genome Research, 15, 1566-1575.
-
(2005)
Genome Research
, vol.15
, pp. 1566-1575
-
-
Nielsen, R.1
Williamson, S.2
Kim, Y.3
-
18
-
-
79956314887
-
Genotype and SNP calling from next-generation sequencing data
-
Nielsen R, Paul JS, Albrechtsen A, Song YS, (2011) Genotype and SNP calling from next-generation sequencing data. Nature Reviews Genetics, 12, 443-451.
-
(2011)
Nature Reviews Genetics
, vol.12
, pp. 443-451
-
-
Nielsen, R.1
Paul, J.S.2
Albrechtsen, A.3
Song, Y.S.4
-
19
-
-
84861691274
-
Double Digest RADseq: An inexpensive method for de novo SNP discovery and genotyping in model and non-model species
-
Peterson BK, Weber JN, Kay EH, Fisher HS, Hoekstra HE, (2012) Double Digest RADseq: an inexpensive method for de novo SNP discovery and genotyping in model and non-model species. PLoS ONE, 7, e37135.
-
(2012)
PLoS ONE
, vol.7
, pp. e37135
-
-
Peterson, B.K.1
Weber, J.N.2
Kay, E.H.3
Fisher, H.S.4
Hoekstra, H.E.5
-
20
-
-
30044440451
-
Genotyping errors: Causes, consequences and solutions
-
Pompanon F, Bonin A, Bellemain E, Taberlet P, (2005) Genotyping errors: causes, consequences and solutions. Nature Reviews Genetics, 6, 847-859.
-
(2005)
Nature Reviews Genetics
, vol.6
, pp. 847-859
-
-
Pompanon, F.1
Bonin, A.2
Bellemain, E.3
Taberlet, P.4
-
21
-
-
0034118493
-
Inference of population structure using multilocus genotype data
-
Pritchard JK, Stephens M, Donnelly P, (2000) Inference of population structure using multilocus genotype data. Genetics, 155, 945-959.
-
(2000)
Genetics
, vol.155
, pp. 945-959
-
-
Pritchard, J.K.1
Stephens, M.2
Donnelly, P.3
-
22
-
-
84919725058
-
Demystifying the RAD fad
-
(this issue)
-
Puritz JB, Matz MV, Toonen RJ, Weber JN, Bolnick DI, Bird CE, (2014) Demystifying the RAD fad. Molecular Ecology (this issue).
-
(2014)
Molecular Ecology
-
-
Puritz, J.B.1
Matz, M.V.2
Toonen, R.J.3
Weber, J.N.4
Bolnick, D.I.5
Bird, C.E.6
-
23
-
-
0033178320
-
Noninvasive genetic sampling: Look before you leap
-
Taberlet P, Waits LP, Luikart G, (1999) Noninvasive genetic sampling: look before you leap. Trends in Ecology & Evolution, 14, 323-327.
-
(1999)
Trends in Ecology & Evolution
, vol.14
, pp. 323-327
-
-
Taberlet, P.1
Waits, L.P.2
Luikart, G.3
-
24
-
-
84922642482
-
Degenerate adaptor sequences for detecting PCR duplicates in reduced representation sequencing data improve genotype calling accuracy
-
Tin MMY, Rheindt FE, Cros E, Mikheyev AS, (2014) Degenerate adaptor sequences for detecting PCR duplicates in reduced representation sequencing data improve genotype calling accuracy. Molecular Ecology Resources. doi: 10.1111/1755-0998.12314.
-
(2014)
Molecular Ecology Resources
-
-
Tin, M.M.Y.1
Rheindt, F.E.2
Cros, E.3
Mikheyev, A.S.4
-
25
-
-
84891541179
-
EzRAD: A simplified method for genomic genotyping in non-model organisms
-
Toonen RJ, Puritz JB, Forsman ZH, et al,. (2013) ezRAD: a simplified method for genomic genotyping in non-model organisms. PeerJ, 1, e203.
-
(2013)
PeerJ
, vol.1
, pp. e203
-
-
Toonen, R.J.1
Puritz, J.B.2
Forsman, Z.H.3
-
26
-
-
77950456427
-
Multiple personal genomes await
-
Venter JC, (2010) Multiple personal genomes await. Nature, 464, 676-677.
-
(2010)
Nature
, vol.464
, pp. 676-677
-
-
Venter, J.C.1
-
27
-
-
84864443173
-
2b-RAD: A simple and flexible method for genome-wide genotyping
-
Wang S, Meyer E, McKay JK, Matz MV, (2012) 2b-RAD: a simple and flexible method for genome-wide genotyping. Nature Methods, 9, 808-812.
-
(2012)
Nature Methods
, vol.9
, pp. 808-812
-
-
Wang, S.1
Meyer, E.2
McKay, J.K.3
Matz, M.V.4
|