메뉴 건너뛰기




Volumn 17, Issue 4, 2015, Pages 386-392

The Shark Strikes Twice: Hypervariable Loop 2 of Shark IgNAR Antibody Variable Domains and Its Potential to Function as an Autonomous Paratope

Author keywords

Antibody engineering; Antibody technology; Antigen binding site; Heavy chain antibody; IgNAR; Shark; Single chain binding domain; Yeast surface display

Indexed keywords

ANTIGENS; CELL ADHESION; CHAINS; MOLECULES; YEAST;

EID: 84933675534     PISSN: 14362228     EISSN: 14362236     Source Type: Journal    
DOI: 10.1007/s10126-015-9642-z     Document Type: Article
Times cited : (18)

References (23)
  • 1
    • 77955484881 scopus 로고    scopus 로고
    • Shark novel antigen receptors—the next generation of biologic therapeutics?
    • COI: 1:CAS:528:DC%2BC3cXhtlSgsL7P, PID: 20047035
    • Barelle C, Gill DS, Charlton K (2009) Shark novel antigen receptors—the next generation of biologic therapeutics? Adv Exp Med Biol 655:49–62. doi:10.1007/978-1-4419-1132-2_6
    • (2009) Adv Exp Med Biol , vol.655 , pp. 49-62
    • Barelle, C.1    Gill, D.S.2    Charlton, K.3
  • 2
    • 77954656041 scopus 로고    scopus 로고
    • An improved yeast transformation method for the generation of very large human antibody libraries
    • COI: 1:CAS:528:DC%2BC3cXjslejuro%3D, PID: 20130105
    • Benatuil L, Perez JM, Belk J, Hsieh CM (2010) An improved yeast transformation method for the generation of very large human antibody libraries. Protein Eng Des Sel 23:155–159. doi:10.1093/protein/gzq002
    • (2010) Protein Eng Des Sel , vol.23 , pp. 155-159
    • Benatuil, L.1    Perez, J.M.2    Belk, J.3    Hsieh, C.M.4
  • 3
    • 0030994634 scopus 로고    scopus 로고
    • Yeast surface display for screening combinatorial polypeptide libraries
    • COI: 1:CAS:528:DyaK2sXjslSqtLc%3D, PID: 9181578
    • Boder ET, Wittrup KD (1997) Yeast surface display for screening combinatorial polypeptide libraries. Nat Biotechnol 15:553–557. doi:10.1038/nbt0697-553
    • (1997) Nat Biotechnol , vol.15 , pp. 553-557
    • Boder, E.T.1    Wittrup, K.D.2
  • 4
    • 34247176809 scopus 로고    scopus 로고
    • Isolating and engineering human antibodies using yeast surface display
    • COI: 1:CAS:528:DC%2BD28XhtFOitLbL, PID: 17406305
    • Chao G, Lau WL, Hackel BJ, Sazinsky SL, Lippow SM, Wittrup KD (2006) Isolating and engineering human antibodies using yeast surface display. Nat Protoc 1:755–768. doi:10.1038/nprot.2006.94
    • (2006) Nat Protoc , vol.1 , pp. 755-768
    • Chao, G.1    Lau, W.L.2    Hackel, B.J.3    Sazinsky, S.L.4    Lippow, S.M.5    Wittrup, K.D.6
  • 5
    • 0036032290 scopus 로고    scopus 로고
    • Structural analysis, selection, and ontogeny of the shark new antigen receptor (IgNAR): identification of a new locus preferentially expressed in early development
    • COI: 1:CAS:528:DC%2BD38XnvFOhurk%3D, PID: 12389098
    • Diaz M, Stanfield RL, Greenberg AS, Flajnik MF (2002) Structural analysis, selection, and ontogeny of the shark new antigen receptor (IgNAR): identification of a new locus preferentially expressed in early development. Immunogenetics 54:501–512. doi:10.1007/s00251-002-0479-z
    • (2002) Immunogenetics , vol.54 , pp. 501-512
    • Diaz, M.1    Stanfield, R.L.2    Greenberg, A.S.3    Flajnik, M.F.4
  • 6
    • 84892368472 scopus 로고    scopus 로고
    • Therapeutic antibody engineering by high efficiency cell screening
    • COI: 1:CAS:528:DC%2BC3sXhvFOhu7zI, PID: 24291259
    • Doerner A, Rhiel L, Zielonka S, Kolmar H (2014) Therapeutic antibody engineering by high efficiency cell screening. FEBS Lett 588:278–287. doi:10.1016/j.febslet.2013.11.025
    • (2014) FEBS Lett , vol.588 , pp. 278-287
    • Doerner, A.1    Rhiel, L.2    Zielonka, S.3    Kolmar, H.4
  • 7
    • 32444436434 scopus 로고    scopus 로고
    • First molecular and biochemical analysis of in vivo affinity maturation in an ectothermic vertebrate
    • COI: 1:CAS:528:DC%2BD28Xhsleht7Y%3D, PID: 16446445
    • Dooley H, Stanfield RL, Brady RA, Flajnik MF (2006) First molecular and biochemical analysis of in vivo affinity maturation in an ectothermic vertebrate. Proc Natl Acad Sci U S A 103:1846–1851. doi:10.1073/pnas.0508341103
    • (2006) Proc Natl Acad Sci U S A , vol.103 , pp. 1846-1851
    • Dooley, H.1    Stanfield, R.L.2    Brady, R.A.3    Flajnik, M.F.4
  • 8
    • 80052341911 scopus 로고    scopus 로고
    • A case of convergence: why did a simple alternative to canonical antibodies arise in sharks and camels?
    • Flajnik MF, Deschacht N, Muyldermans S (2011) A case of convergence: why did a simple alternative to canonical antibodies arise in sharks and camels? PLoS Bio l9:e1001120. doi:10.1371/journal.pbio.1001120
    • (2011) PLoS Bio , vol.l9 , pp. e1001120
    • Flajnik, M.F.1    Deschacht, N.2    Muyldermans, S.3
  • 9
    • 34648832245 scopus 로고    scopus 로고
    • Yeast surface display for protein engineering and characterization
    • COI: 1:CAS:528:DC%2BD2sXhtFSltbvN, PID: 17870469
    • Gai SA, Wittrup KD (2007) Yeast surface display for protein engineering and characterization. Curr Opin Struct Biol 17:467–473. doi:10.1016/j.sbi.2007.08.012
    • (2007) Curr Opin Struct Biol , vol.17 , pp. 467-473
    • Gai, S.A.1    Wittrup, K.D.2
  • 10
    • 0028962371 scopus 로고
    • A new antigen receptor gene family that undergoes rearrangement and extensive somatic diversification in sharks
    • COI: 1:CAS:528:DyaK2MXkt1yisrk%3D, PID: 7877689
    • Greenberg AS, Avila D, Hughes M, Hughes A, McKinney EC, Flajnik MF (1995) A new antigen receptor gene family that undergoes rearrangement and extensive somatic diversification in sharks. Nature 374:168–173. doi:10.1038/374168a0
    • (1995) Nature , vol.374 , pp. 168-173
    • Greenberg, A.S.1    Avila, D.2    Hughes, M.3    Hughes, A.4    McKinney, E.C.5    Flajnik, M.F.6
  • 11
    • 0032773506 scopus 로고    scopus 로고
    • The immunoglobulin fold family: sequence analysis and 3D structure comparisons
    • COI: 1:CAS:528:DyaK1MXltlertrw%3D, PID: 10436082
    • Halaby DM, Poupon A, Mornon J (1999) The immunoglobulin fold family: sequence analysis and 3D structure comparisons. Protein Eng 12:563–571
    • (1999) Protein Eng , vol.12 , pp. 563-571
    • Halaby, D.M.1    Poupon, A.2    Mornon, J.3
  • 12
    • 84858257263 scopus 로고    scopus 로고
    • Dual targeting strategies with bispecific antibodies
    • PID: 22453100
    • Kontermann RE (2012) Dual targeting strategies with bispecific antibodies. mAbs 4:182–197. doi:10.4161/mabs.4.2.19000
    • (2012) MAbs , vol.4 , pp. 182-197
    • Kontermann, R.E.1
  • 13
    • 84879040923 scopus 로고    scopus 로고
    • Atypical antigen recognition mode of a shark immunoglobulin new antigen receptor (IgNAR) variable domain characterized by humanization and structural analysis
    • COI: 1:CAS:528:DC%2BC3sXpsFantro%3D, PID: 23632026
    • Kovalenko OV et al (2013) Atypical antigen recognition mode of a shark immunoglobulin new antigen receptor (IgNAR) variable domain characterized by humanization and structural analysis. J Biol Chem 288:17408–17419. doi:10.1074/jbc.M112.435289
    • (2013) J Biol Chem , vol.288 , pp. 17408-17419
    • Kovalenko, O.V.1
  • 14
    • 74249090260 scopus 로고    scopus 로고
    • Improving physical realism, stereochemistry, and side-chain accuracy in homology modeling: four approaches that performed well in CASP8
    • COI: 1:CAS:528:DC%2BD1MXhtlant7%2FF, PID: 19768677
    • Krieger E et al (2009) Improving physical realism, stereochemistry, and side-chain accuracy in homology modeling: four approaches that performed well in CASP8. Proteins 77(Suppl 9):114–122. doi:10.1002/prot.22570
    • (2009) Proteins , vol.77 , pp. 114-122
    • Krieger, E.1
  • 15
    • 4544250973 scopus 로고    scopus 로고
    • Crystal structure of a shark single-domain antibody V region in complex with lysozyme
    • COI: 1:CAS:528:DC%2BD2cXnsFajtbg%3D, PID: 15319492
    • Stanfield RL, Dooley H, Flajnik MF, Wilson IA (2004) Crystal structure of a shark single-domain antibody V region in complex with lysozyme. Science 305:1770–1773. doi:10.1126/science.1101148
    • (2004) Science , vol.305 , pp. 1770-1773
    • Stanfield, R.L.1    Dooley, H.2    Flajnik, M.F.3    Wilson, I.A.4
  • 16
    • 33847103076 scopus 로고    scopus 로고
    • Maturation of shark single-domain (IgNAR) antibodies: evidence for induced-fit binding
    • COI: 1:CAS:528:DC%2BD2sXitl2mtbw%3D, PID: 17258766
    • Stanfield RL, Dooley H, Verdino P, Flajnik MF, Wilson IA (2007) Maturation of shark single-domain (IgNAR) antibodies: evidence for induced-fit binding. J Mol Biol 367:358–372. doi:10.1016/j.jmb.2006.12.045
    • (2007) J Mol Biol , vol.367 , pp. 358-372
    • Stanfield, R.L.1    Dooley, H.2    Verdino, P.3    Flajnik, M.F.4    Wilson, I.A.5
  • 17
    • 27644475866 scopus 로고    scopus 로고
    • Structure of a shark IgNAR antibody variable domain and modeling of an early-developmental isotype
    • COI: 1:CAS:528:DC%2BD2MXhtF2it7%2FK, PID: 16199666
    • Streltsov VA, Carmichael JA, Nuttall SD (2005) Structure of a shark IgNAR antibody variable domain and modeling of an early-developmental isotype. Protein Sci 14:2901–2909. doi:10.1110/ps.051709505
    • (2005) Protein Sci , vol.14 , pp. 2901-2909
    • Streltsov, V.A.1    Carmichael, J.A.2    Nuttall, S.D.3
  • 18
    • 0033976101 scopus 로고    scopus 로고
    • Fine affinity discrimination by yeast surface display and flow cytometry
    • Van Antwerp JJ, Wittrup KD (2000) Fine affinity discrimination by yeast surface display and flow cytometry. Biotechnol Prog 16:31–37. doi:10.1021/bp990133s
    • (2000) Biotechnol Prog , vol.16 , pp. 31-37
    • Van Antwerp, J.J.1    Wittrup, K.D.2
  • 19
    • 84909639757 scopus 로고    scopus 로고
    • Tumor-antigen-binding bispecific antibodies for cancer treatment
    • COI: 1:CAS:528:DC%2BC2cXhvVOkurfL, PID: 25440609
    • Weidle UH, Kontermann RE, Brinkmann U (2014) Tumor-antigen-binding bispecific antibodies for cancer treatment. Semin Oncol 41:653–660. doi:10.1053/j.seminoncol.2014.08.004
    • (2014) Semin Oncol , vol.41 , pp. 653-660
    • Weidle, U.H.1    Kontermann, R.E.2    Brinkmann, U.3
  • 20
    • 77954638589 scopus 로고    scopus 로고
    • Introducing antigen-binding sites in structural loops of immunoglobulin constant domains: Fc fragments with engineered HER2/neu-binding sites and antibody properties
    • COI: 1:CAS:528:DC%2BC3cXjslejtbk%3D
    • Wozniak-Knopp G et al (2010) Introducing antigen-binding sites in structural loops of immunoglobulin constant domains: Fc fragments with engineered HER2/neu-binding sites and antibody properties. Proc Natl Acad Sci U S A 23:289–297. doi:10.1093/protein/gzq005
    • (2010) Proc Natl Acad Sci U S A , vol.23 , pp. 289-297
    • Wozniak-Knopp, G.1
  • 21
    • 67949120214 scopus 로고    scopus 로고
    • A large library based on a novel (CH2) scaffold: identification of HIV-1 inhibitors
    • COI: 1:CAS:528:DC%2BD1MXps1Chtb0%3D, PID: 19615335
    • Xiao X, Feng Y, Vu BK, Ishima R, Dimitrov DS (2009) A large library based on a novel (CH2) scaffold: identification of HIV-1 inhibitors. Biochem Biophys Res Commun 387:387–392. doi:10.1016/j.bbrc.2009.07.044
    • (2009) Biochem Biophys Res Commun , vol.387 , pp. 387-392
    • Xiao, X.1    Feng, Y.2    Vu, B.K.3    Ishima, R.4    Dimitrov, D.S.5
  • 23
    • 84911899117 scopus 로고    scopus 로고
    • Shark attack: high affinity binding proteins derived from shark vNAR domains by stepwise in vitro affinity maturation
    • COI: 1:CAS:528:DC%2BC2cXpslKmu70%3D, PID: 24862193
    • Zielonka S et al (2014b) Shark attack: high affinity binding proteins derived from shark vNAR domains by stepwise in vitro affinity maturation. J Biotechnol 191:236–245. doi:10.1016/j.jbiotec.2014.04.023
    • (2014) J Biotechnol , vol.191 , pp. 236-245
    • Zielonka, S.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.