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Volumn 32, Issue 7, 2015, Pages 1847-1861

Why selection might be stronger when populations are small: Intron size and density predict within and between-species usage of exonic splice associated cis-motifs

Author keywords

exonic splice enhancer; intron density; purifying selection; synonymous mutation

Indexed keywords

MICRORNA; SERINE ARGININE RICH PROTEIN; TRANSFER RNA; AMINO ACID; CODON;

EID: 84931289173     PISSN: 07374038     EISSN: 15371719     Source Type: Journal    
DOI: 10.1093/molbev/msv069     Document Type: Article
Times cited : (26)

References (71)
  • 1
    • 77956537712 scopus 로고    scopus 로고
    • A synonymous single nucleotide polymorphism in deltaF508 CFTR alters the secondary structure of the mRNA and the expression of the mutant protein
    • Bartoszewski RA, Jablonsky M, Bartoszewska S, Stevenson L, Dai Q, Kappes J, Collawn JF, Bebok Z. (2010). A synonymous single nucleotide polymorphism in DeltaF508 CFTR alters the secondary structure of the mRNA and the expression of the mutant protein. J Biol Chem. 285: 28741-28748
    • (2010) J Biol Chem , vol.285 , pp. 28741-28748
    • Bartoszewski, R.A.1    Jablonsky, M.2    Bartoszewska, S.3    Stevenson, L.4    Dai, Q.5    Kappes, J.6    Collawn, J.F.7    Bebok, Z.8
  • 3
    • 0028895417 scopus 로고
    • Exon recognition in vertebrate splicing
    • Berget SM. (1995). Exon recognition in vertebrate splicing. J Biol Chem. 270: 2411-2414
    • (1995) J Biol Chem , vol.270 , pp. 2411-2414
    • Berget, S.M.1
  • 5
    • 0034161419 scopus 로고    scopus 로고
    • Exonic splicing enhancers: Mechanism of action, diversity and role in human genetic diseases
    • Blencowe BJ. (2000). Exonic splicing enhancers: mechanism of action, diversity and role in human genetic diseases. Trends Biochem Sci. 25: 106-110
    • (2000) Trends Biochem Sci , vol.25 , pp. 106-110
    • Blencowe, B.J.1
  • 7
    • 84890527710 scopus 로고    scopus 로고
    • The evolution, impact and properties of exonic splice enhancers
    • Cáceres EF, Hurst LD. (2013). The evolution, impact and properties of exonic splice enhancers. Genome Biol. 14: R143
    • (2013) Genome Biol , vol.14 , pp. R143
    • Cáceres, E.F.1    Hurst, L.D.2
  • 8
    • 31844449496 scopus 로고    scopus 로고
    • Synonymous SNPs provide evidence for selective constraint on human exonic splicing enhancers
    • Carlini DB, Genut JE. (2006). Synonymous SNPs provide evidence for selective constraint on human exonic splicing enhancers. J Mol Evol. 62: 89-98
    • (2006) J Mol Evol , vol.62 , pp. 89-98
    • Carlini, D.B.1    Genut, J.E.2
  • 9
    • 0034043778 scopus 로고    scopus 로고
    • Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
    • Castresana J. (2000). Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Mol Biol Evol. 17: 540-552
    • (2000) Mol Biol Evol , vol.17 , pp. 540-552
    • Castresana, J.1
  • 10
    • 30744432134 scopus 로고    scopus 로고
    • Evidence for selection on synonymous mutations affecting stability of mRNA secondary structure in mammals
    • Chamary JV, Hurst LD. (2005). Evidence for selection on synonymous mutations affecting stability of mRNA secondary structure in mammals. Genome Biol. 6: R75
    • (2005) Genome Biol , vol.6 , pp. R75
    • Chamary, J.V.1    Hurst, L.D.2
  • 11
    • 84901431283 scopus 로고    scopus 로고
    • Correcting for differential transcript coverage reveals a strong relationship between alternative splicing and organism complexity
    • Chen L, Bush SJ, Tovar-Corona JM, Castillo-Morales A, Urrutia AO. (2014). Correcting for differential transcript coverage reveals a strong relationship between alternative splicing and organism complexity. Mol Biol Evol. 31: 1402-1413
    • (2014) Mol Biol Evol , vol.31 , pp. 1402-1413
    • Chen, L.1    Bush, S.J.2    Tovar-Corona, J.M.3    Castillo-Morales, A.4    Urrutia, A.O.5
  • 12
    • 16544369474 scopus 로고    scopus 로고
    • Comment on the origins of genome complexity
    • author reply 978
    • Daubin V, Moran NA. (2004). Comment on The origins of genome complexity. Science 306: 978; author reply 978
    • (2004) Science , vol.306 , pp. 978
    • Daubin, V.1    Moran, N.A.2
  • 13
    • 33845895301 scopus 로고    scopus 로고
    • Compensatory relationship between splice sites and exonic splicing signals depending on the length of vertebrate introns
    • Dewey CN, Rogozin IB, Koonin EV. (2006). Compensatory relationship between splice sites and exonic splicing signals depending on the length of vertebrate introns. BMC Genomics 7: 311
    • (2006) BMC Genomics , vol.7 , pp. 311
    • Dewey, C.N.1    Rogozin, I.B.2    Koonin, E.V.3
  • 14
    • 0036889468 scopus 로고    scopus 로고
    • Evolution of synonymous codon usage inmetazoans
    • Duret L. (2002). Evolution of synonymous codon usage inmetazoans. Curr Opin Genet Dev. 12: 640-649
    • (2002) Curr Opin Genet Dev , vol.12 , pp. 640-649
    • Duret, L.1
  • 15
    • 0028963020 scopus 로고
    • Statistical analysis of vertebrate sequences reveals that long genes are scarce in GC-rich isochores
    • Duret L, Mouchiroud D, Gautier C. (1995). Statistical analysis of vertebrate sequences reveals that long genes are scarce in GC-rich isochores. J Mol Evol. 40: 308-317
    • (1995) J Mol Evol , vol.40 , pp. 308-317
    • Duret, L.1    Mouchiroud, D.2    Gautier, C.3
  • 16
    • 3042666256 scopus 로고    scopus 로고
    • Muscle: Multiple sequence alignment with high accuracy and high throughput
    • Edgar RC. (2004). MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32: 1792-1797
    • (2004) Nucleic Acids Res , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 17
    • 72649102150 scopus 로고    scopus 로고
    • Distributions of selectively constrained sites and deleterious mutation rates in the hominid and murid genomes
    • Eory L, Halligan DL, Keightley PD. (2010). Distributions of selectively constrained sites and deleterious mutation rates in the hominid and murid genomes. Mol Biol Evol. 27: 177-192
    • (2010) Mol Biol Evol , vol.27 , pp. 177-192
    • Eory, L.1    Halligan, D.L.2    Keightley, P.D.3
  • 18
    • 0037047644 scopus 로고    scopus 로고
    • Predictive identification of exonic splicing enhancers in human genes
    • Fairbrother WG, Yeh RF, Sharp PA, Burge CB. (2002). Predictive identification of exonic splicing enhancers in human genes. Science 297: 1007-1013
    • (2002) Science , vol.297 , pp. 1007-1013
    • Fairbrother, W.G.1    Yeh, R.F.2    Sharp, P.A.3    Burge, C.B.4
  • 21
    • 42449117498 scopus 로고    scopus 로고
    • Maladaptation and the paradox of robustness in evolution
    • Frank SA. (2007). Maladaptation and the paradox of robustness in evolution. PLoS One 2: e1021
    • (2007) Plos One , vol.2 , pp. e1021
    • Frank, S.A.1
  • 23
    • 0035678847 scopus 로고    scopus 로고
    • Is the population size of a species relevant to its evolution?
    • Gillespie JH. (2001). Is the population size of a species relevant to its evolution?. Evolution 55: 2161-2169
    • (2001) Evolution , vol.55 , pp. 2161-2169
    • Gillespie, J.H.1
  • 24
    • 0033835333 scopus 로고    scopus 로고
    • Sorting out the complexity of SR protein functions
    • Graveley BR. (2000). Sorting out the complexity of SR protein functions. RNA 6: 1197-1211
    • (2000) RNA , vol.6 , pp. 1197-1211
    • Graveley, B.R.1
  • 26
    • 33746435693 scopus 로고    scopus 로고
    • Preliminary assessment of the impact of microRNAmediated regulation on coding sequence evolution in mammals
    • Hurst LD. (2006). Preliminary assessment of the impact of microRNAmediated regulation on coding sequence evolution in mammals. J Mol Evol. 63: 174-182
    • (2006) J Mol Evol , vol.63 , pp. 174-182
    • Hurst, L.D.1
  • 27
    • 0019949369 scopus 로고
    • Correlation between the abundance of yeast transfer RNAs and the occurrence of the respective codons in protein genes differences in synonymous codon choice patterns of yeast and escherichia coli with reference to the abundance of isoaccepting transfer RNAs
    • Ikemura T. (1982). Correlation between the abundance of yeast transfer RNAs and the occurrence of the respective codons in protein genes. Differences in synonymous codon choice patterns of yeast and Escherichia coli with reference to the abundance of isoaccepting transfer RNAs. J Mol Biol. 158: 573-597
    • (1982) J Mol Biol , vol.158 , pp. 573-597
    • Ikemura, T.1
  • 28
    • 0021958933 scopus 로고
    • Codon usage and tRNA content in unicellular and multicellular organisms
    • Ikemura T. (1985). Codon usage and tRNA content in unicellular and multicellular organisms. Mol Biol Evol. 2: 13-34
    • (1985) Mol Biol Evol , vol.2 , pp. 13-34
    • Ikemura, T.1
  • 29
    • 44349095887 scopus 로고    scopus 로고
    • Adegenet: A R package for the multivariate analysis of genetic markers
    • Jombart T. (2008). adegenet: a R package for the multivariate analysis of genetic markers. Bioinformatics 24: 1403-1405
    • (2008) Bioinformatics , vol.24 , pp. 1403-1405
    • Jombart, T.1
  • 30
    • 80054949793 scopus 로고    scopus 로고
    • Adegenet 1.3-1: New tools for the analysis of genome-wide SNP data
    • Jombart T, Ahmed I. (2011). adegenet 1.3-1: new tools for the analysis of genome-wide SNP data. Bioinformatics 27: 3070-3071
    • (2011) Bioinformatics , vol.27 , pp. 3070-3071
    • Jombart, T.1    Ahmed, I.2
  • 31
    • 0034821884 scopus 로고    scopus 로고
    • Codon usage and tRNA genes in eukaryotes: Correlation of codon usage diversity with translation efficiency and with CG-dinucleotide usage as assessed by multivariate analysis
    • Kanaya S, Yamada Y, Kinouchi M, Kudo Y, Ikemura T. (2001). Codon usage and tRNA genes in eukaryotes: correlation of codon usage diversity with translation efficiency and with CG-dinucleotide usage as assessed by multivariate analysis. J Mol Evol. 53: 290-298
    • (2001) J Mol Evol , vol.53 , pp. 290-298
    • Kanaya, S.1    Yamada, Y.2    Kinouchi, M.3    Kudo, Y.4    Ikemura, T.5
  • 32
    • 70449629063 scopus 로고    scopus 로고
    • Large introns in relation to alternative splicing and gene evolution: A case study of drosophila bruno-3
    • Kandul NP, Noor MA. (2009). Large introns in relation to alternative splicing and gene evolution: a case study of drosophila bruno-3. BMC Genet. 10: 67
    • (2009) BMC Genet , vol.10 , pp. 67
    • Kandul, N.P.1    Noor, M.A.2
  • 33
    • 84858314394 scopus 로고    scopus 로고
    • BioMart: Driving a paradigm change in biological data managemen
    • Oxford bar049
    • Kasprzyk A. (2011). BioMart: driving a paradigm change in biological data management. Database (Oxford) 2011: bar049
    • (2011) Database , vol.2011
    • Kasprzyk, A.1
  • 35
    • 15744388330 scopus 로고    scopus 로고
    • Evidence for widespread degradation of gene control regions in hominid genomes
    • Keightley PD, Lercher MJ, Eyre-Walker A. (2005). Evidence for widespread degradation of gene control regions in hominid genomes. PLoS Biol. 3: e42
    • (2005) Plos Biol , vol.3 , pp. e42
    • Keightley, P.D.1    Lercher, M.J.2    Eyre-Walker, A.3
  • 36
    • 33646588998 scopus 로고    scopus 로고
    • Correlated asymmetry of sequence and functional divergence between duplicate proteins of saccharomyces cerevisiae
    • Kim S-H, Soojin VY. (2006). Correlated asymmetry of sequence and functional divergence between duplicate proteins of Saccharomyces cerevisiae. Mol Biol Evol. 23: 1068-1075
    • (2006) Mol Biol Evol , vol.23 , pp. 1068-1075
    • Kim, S.-H.1    Soojin, V.Y.2
  • 37
    • 0022423415 scopus 로고
    • Size and position of intervening sequences are critical for the splicing efficiency of pre-mRNA in the yeast saccharomyces cerevisiae
    • Klinz FJ, Gallwitz D. (1985). Size and position of intervening sequences are critical for the splicing efficiency of pre-mRNA in the yeast Saccharomyces cerevisiae. Nucleic Acids Res. 13: 3791-3804
    • (1985) Nucleic Acids Res , vol.13 , pp. 3791-3804
    • Klinz, F.J.1    Gallwitz, D.2
  • 38
    • 84870450672 scopus 로고    scopus 로고
    • Mega-cc: Computing core of molecular evolutionary genetics analysis program for automated and iterative data analysis
    • Kumar S, Stecher G, Peterson D, Tamura K. (2012). MEGA-CC: computing core of molecular evolutionary genetics analysis program for automated and iterative data analysis. Bioinformatics 28: 2685-2686
    • (2012) Bioinformatics , vol.28 , pp. 2685-2686
    • Kumar, S.1    Stecher, G.2    Peterson, D.3    Tamura, K.4
  • 39
    • 84878486976 scopus 로고    scopus 로고
    • Strong purifying selection at synonymous sites in D melanogaster
    • Lawrie DS, Messer PW, Hershberg R, Petrov DA. (2013). Strong purifying selection at synonymous sites in D. melanogaster. PLoS Genet. 9: e1003527
    • (2013) Plos Genet , vol.9 , pp. e1003527
    • Lawrie, D.S.1    Messer, P.W.2    Hershberg, R.3    Petrov, D.A.4
  • 40
    • 65649117685 scopus 로고    scopus 로고
    • DnaSP v5: A software for comprehensive analysis of DNA polymorphism data
    • Librado P, Rozas J. (2009). DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25: 1451-1452
    • (2009) Bioinformatics , vol.25 , pp. 1451-1452
    • Librado, P.1    Rozas, J.2
  • 41
    • 79960594889 scopus 로고    scopus 로고
    • Using positional distribution to identify splicing elements and predict premRNA processing defects in human genes
    • Lim KH, Ferraris L, Filloux ME, Raphael BJ, Fairbrother WG. (2011). Using positional distribution to identify splicing elements and predict premRNA processing defects in human genes. Proc Natl Acad Sci USA. 108: 11093-11098
    • (2011) Proc Natl Acad Sci USA , vol.108 , pp. 11093-11098
    • Lim, K.H.1    Ferraris, L.2    Filloux, M.E.3    Raphael, B.J.4    Fairbrother, W.G.5
  • 42
    • 0035949674 scopus 로고    scopus 로고
    • A computational analysis of sequence features involved in recognition of short introns
    • Lim LP, Burge CB. (2001). A computational analysis of sequence features involved in recognition of short introns. Proc Natl Acad Sci USA. 98: 11193-11198
    • (2001) Proc Natl Acad Sci USA , vol.98 , pp. 11193-11198
    • Lim, L.P.1    Burge, C.B.2
  • 43
    • 0026661101 scopus 로고
    • Insertion of non-intron sequence into maize introns interferes with splicing
    • Luehrsen KR, Walbot V. (1992). Insertion of non-intron sequence into maize introns interferes with splicing. Nucleic Acids Res. 20: 5181-5187
    • (1992) Nucleic Acids Res , vol.20 , pp. 5181-5187
    • Luehrsen, K.R.1    Walbot, V.2
  • 44
    • 34250709215 scopus 로고    scopus 로고
    • Sunderland (MA): Sinauer Associates; Basingstoke: Palgrave [distributor
    • Lynch M. (2007). The origins of genome architecture. Sunderland (MA): Sinauer Associates; Basingstoke: Palgrave [distributor
    • (2007) The Origins of Genome Architecture
    • Lynch, M.1
  • 45
    • 0345306751 scopus 로고    scopus 로고
    • The origins of genome complexity
    • Lynch M, Conery JS. (2003). The origins of genome complexity. Science 302: 1401-1404
    • (2003) Science , vol.302 , pp. 1401-1404
    • Lynch, M.1    Conery, J.S.2
  • 47
    • 0015722319 scopus 로고
    • Slightly deleterious mutant substitutions in evolution
    • Ohta T. (1973). Slightly deleterious mutant substitutions in evolution. Nature 246: 96-98
    • (1973) Nature , vol.246 , pp. 96-98
    • Ohta, T.1
  • 48
    • 0027020232 scopus 로고
    • The nearly neutral theory of molecular evolution
    • Ohta T. (1992). The nearly neutral theory of molecular evolution. Annu Rev Ecol Syst. 23: 263-286
    • (1992) Annu Rev Ecol Syst , vol.23 , pp. 263-286
    • Ohta, T.1
  • 49
    • 0030218056 scopus 로고    scopus 로고
    • The current significance and standing of neutral and neutral theories
    • discussion 683
    • Ohta T. (1996). The current significance and standing of neutral and neutral theories. Bioessays 18: 673-677; discussion 683
    • (1996) Bioessays , vol.18 , pp. 673-677
    • Ohta, T.1
  • 50
    • 0033613376 scopus 로고    scopus 로고
    • Inferring the historical patterns of biological evolution
    • Pagel M. (1999). Inferring the historical patterns of biological evolution. Nature 401: 877-884
    • (1999) Nature , vol.401 , pp. 877-884
    • Pagel, M.1
  • 51
    • 77949527981 scopus 로고    scopus 로고
    • Pegas: An R package for population genetics with an integrated-modular approach
    • Paradis E. (2010). pegas: an R package for population genetics with an integrated-modular approach. Bioinformatics 26: 419-420
    • (2010) Bioinformatics , vol.26 , pp. 419-420
    • Paradis, E.1
  • 52
    • 1042304216 scopus 로고    scopus 로고
    • APE: Analyses of Phylogenetics and Evolution in R language
    • Paradis E, Claude J, Strimmer K. (2004). APE: Analyses of Phylogenetics and Evolution in R language. Bioinformatics 20: 289-290
    • (2004) Bioinformatics , vol.20 , pp. 289-290
    • Paradis, E.1    Claude, J.2    Strimmer, K.3
  • 53
    • 30744469841 scopus 로고    scopus 로고
    • Evidence for purifying selection against synonymous mutations in mammalian exonic splicing enhancers
    • Parmley JL, Chamary JV, Hurst LD. (2006). Evidence for purifying selection against synonymous mutations in mammalian exonic splicing enhancers. Mol Biol Evol. 23: 301-309
    • (2006) Mol Biol Evol , vol.23 , pp. 301-309
    • Parmley, J.L.1    Chamary, J.V.2    Hurst, L.D.3
  • 54
    • 34547709593 scopus 로고    scopus 로고
    • Exonic splicing regulatory elements skew synonymous codon usage near intron-exon boundaries in mammals
    • Parmley JL, Hurst LD. (2007). Exonic splicing regulatory elements skew synonymous codon usage near intron-exon boundaries in mammals. Mol Biol Evol. 24: 1600-1603
    • (2007) Mol Biol Evol , vol.24 , pp. 1600-1603
    • Parmley, J.L.1    Hurst, L.D.2
  • 56
    • 84903744597 scopus 로고    scopus 로고
    • PopGenome: An efficient swiss army knife for population genomic analyses in R
    • Pfeifer B, Wittelsburger U, Ramos-Onsins SE, Lercher MJ. (2014). PopGenome: an efficient swiss army knife for population genomic analyses in R. Mol Biol Evol. 31: 1929-1936
    • (2014) Mol Biol Evol , vol.31 , pp. 1929-1936
    • Pfeifer, B.1    Wittelsburger, U.2    Ramos-Onsins, S.E.3    Lercher, M.J.4
  • 57
    • 78650689920 scopus 로고    scopus 로고
    • Noisy splicing drives mRNA isoform diversity in human cells
    • Pickrell JK, Pai AA, Gilad Y, Pritchard JK. (2010). Noisy splicing drives mRNA isoform diversity in human cells. PLoS Genet. 6: e1001236
    • (2010) Plos Genet , vol.6 , pp. e1001236
    • Pickrell, J.K.1    Pai, A.A.2    Gilad, Y.3    Pritchard, J.K.4
  • 58
    • 56349150399 scopus 로고    scopus 로고
    • Co-evolution of the branch site and SR proteins in eukaryotes
    • Plass M, Agirre E, Reyes D, Camara F, Eyras E. (2008). Co-evolution of the branch site and SR proteins in eukaryotes. Trends Genet. 24: 590-594
    • (2008) Trends Genet , vol.24 , pp. 590-594
    • Plass, M.1    Agirre, E.2    Reyes, D.3    Camara, F.4    Eyras, E.5
  • 60
    • 0029594594 scopus 로고
    • DNA SP, DNA sequence polymorphism: An interactive program for estimating population genetics parameters from DNA sequence data
    • Rozas J, Rozas R. (1995). Dna SP, DNA sequence polymorphism: an interactive program for estimating population genetics parameters from DNA sequence data. Comput Appl Biosci. 11: 621-625
    • (1995) Comput Appl Biosci , vol.11 , pp. 621-625
    • Rozas, J.1    Rozas, R.2
  • 62
    • 33645517835 scopus 로고    scopus 로고
    • An intronic insertion in KPL2 results in aberrant splicing and causes the immotile short-tail sperm defect in the pig
    • Sironen A, Thomsen B, Andersson M, Ahola V, Vilkki J. (2006). An intronic insertion in KPL2 results in aberrant splicing and causes the immotile short-tail sperm defect in the pig. Proc Natl Acad Sci USA. 103: 5006-5011
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 5006-5011
    • Sironen, A.1    Thomsen, B.2    Andersson, M.3    Ahola, V.4    Vilkki, J.5
  • 63
    • 0033034668 scopus 로고    scopus 로고
    • Genome-wide bioinformatic and molecular analysis of introns in saccharomyces cerevisiae
    • Spingola M, Grate L, Haussler D, Ares M Jr. (1999). Genome-wide bioinformatic and molecular analysis of introns in Saccharomyces cerevisiae. RNA 5: 221-234
    • (1999) RNA , vol.5 , pp. 221-234
    • Spingola, M.1    Grate, L.2    Haussler, D.3    Ares, M.4
  • 64
    • 34547489084 scopus 로고    scopus 로고
    • Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments
    • Talavera G, Castresana J. (2007). Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments. Syst Biol. 56: 564-577
    • (2007) Syst Biol , vol.56 , pp. 564-577
    • Talavera, G.1    Castresana, J.2
  • 67
    • 84901855485 scopus 로고    scopus 로고
    • Rate of elongation by RNA polymerase II is associated with specific gene features and epigenetic modifications
    • Veloso A, Kirkconnell KS, Magnuson B, Biewen B, Paulsen MT, Wilson TE, Ljungman M. (2014). Rate of elongation by RNA polymerase II is associated with specific gene features and epigenetic modifications. Genome Res. 24: 896-905
    • (2014) Genome Res , vol.24 , pp. 896-905
    • Veloso, A.1    Kirkconnell, K.S.2    Magnuson, B.3    Biewen, B.4    Paulsen, M.T.5    Wilson, T.E.6    Ljungman, M.7
  • 68
    • 43549084386 scopus 로고    scopus 로고
    • Finding exonic islands in a sea of non-coding sequence: Splicing related constraints on protein composition and evolution are common in intron-rich genomes
    • Warnecke T, Parmley JL, Hurst LD. (2008). Finding exonic islands in a sea of non-coding sequence: splicing related constraints on protein composition and evolution are common in intron-rich genomes. Genome Biol. 9: R29
    • (2008) Genome Biol , vol.9 , pp. R29
    • Warnecke, T.1    Parmley, J.L.2    Hurst, L.D.3
  • 69
    • 77957326306 scopus 로고    scopus 로고
    • Did genetic drift drive increases in genome complexity?
    • Whitney KD, Garland T Jr. (2010). Did genetic drift drive increases in genome complexity?. PLoS Genet. 6: e1001080
    • (2010) Plos Genet , vol.6 , pp. e1001080
    • Whitney, K.D.1    Garland, T.2
  • 70
    • 84892511438 scopus 로고    scopus 로고
    • Evidence for deep phylogenetic conservation of exonic splice-related constraints: Splice-related skews at exonic ends in the brown alga ectocarpus are common and resemble those seen in humans
    • Wu X, Tronholm A, Cáceres EF, Tovar-Corona JM, Chen L, Urrutia AO, Hurst LD. (2013). Evidence for deep phylogenetic conservation of exonic splice-related constraints: splice-related skews at exonic ends in the brown alga Ectocarpus are common and resemble those seen in humans. Genome Biol Evol. 5: 1731-1745
    • (2013) Genome Biol Evol , vol.5 , pp. 1731-1745
    • Wu, X.1    Tronholm, A.2    Cáceres, E.F.3    Tovar-Corona, J.M.4    Chen, L.5    Urrutia, A.O.6    Hurst, L.D.7
  • 71
    • 34547803197 scopus 로고    scopus 로고
    • Paml 4: Phylogenetic analysis by maximum likelihood
    • Yang Z. (2007). PAML 4: phylogenetic analysis by maximum likelihood. Mol Biol Evol. 24: 1586-1591
    • (2007) Mol Biol Evol , vol.24 , pp. 1586-1591
    • Yang, Z.1


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