메뉴 건너뛰기




Volumn 5, Issue 2, 1999, Pages 221-234

Genome-wide bioinformatic and molecular analysis of introns in Saccharomyces cerevisiae

Author keywords

Branchpoint; Hidden Markov model; Intron database; Intron display; Splice site; Splicing

Indexed keywords

MESSENGER RNA PRECURSOR; RIBOSOME PROTEIN;

EID: 0033034668     PISSN: 13558382     EISSN: None     Source Type: Journal    
DOI: 10.1017/S1355838299981682     Document Type: Article
Times cited : (240)

References (89)
  • 1
    • 0029167994 scopus 로고
    • Rearrangement of snRNA structure during assembly and function of the spliceosome
    • Ares M Jr, Weiser B. 1995. Rearrangement of snRNA structure during assembly and function of the spliceosome. Prog Nucleic Acid Res Mol Bio 50:131-159.
    • (1995) Prog Nucleic Acid Res Mol Bio , vol.50 , pp. 131-159
    • Ares M., Jr.1    Weiser, B.2
  • 3
    • 0025043097 scopus 로고
    • Ribosomal protein L30 is dispensable in the yeast Saccharomyces cerevisiae
    • Baronas-Lowell DM, Warner JR. 1990. Ribosomal protein L30 is dispensable in the yeast Saccharomyces cerevisiae. Mol Cell Biol 10:5235-5243.
    • (1990) . Mol Cell Biol , vol.10 , pp. 5235-5243
    • Baronas-Lowell, D.M.1    Warner, J.R.2
  • 4
    • 0029162673 scopus 로고
    • Autoregulation of expression of the yeast Dbp2p 'DEAD-box' protein is mediated by sequences in the conserved DBP2 intron
    • Barta I, Iggo R. 1995. Autoregulation of expression of the yeast Dbp2p 'DEAD-box' protein is mediated by sequences in the conserved DBP2 intron. EMBO J 14:3800-3808.
    • (1995) EMBO J , vol.14 , pp. 3800-3808
    • Barta, I.1    Iggo, R.2
  • 5
    • 0030696675 scopus 로고    scopus 로고
    • The splicing factor BBP interacts specifically with the pre-mRNA branchpoint sequence UACUAAC
    • Berglund JA, Chua K, Abovich N, Reed R, Rosbash M. 1997. The splicing factor BBP interacts specifically with the pre-mRNA branchpoint sequence UACUAAC. Cell 89:781-787.
    • (1997) Cell , vol.89 , pp. 781-787
    • Berglund, J.A.1    Chua, K.2    Abovich, N.3    Reed, R.4    Rosbash, M.5
  • 6
    • 0029949595 scopus 로고    scopus 로고
    • Requirement for SLU7 in yeast pre-mRNA splicing is dictated by the distance between the branchpoint and the 3′ splice site
    • Brys A, Schwer B. 1996. Requirement for SLU7 in yeast pre-mRNA splicing is dictated by the distance between the branchpoint and the 3′ splice site. RNA 2:707-717.
    • (1996) RNA , vol.2 , pp. 707-717
    • Brys, A.1    Schwer, B.2
  • 7
    • 0025755924 scopus 로고
    • Isolation and characterization of the gene encoding yeast debranching enzyme
    • Chapman KB, Boeke JD. 1991. Isolation and characterization of the gene encoding yeast debranching enzyme. Cell 65:483-492.
    • (1991) Cell , vol.65 , pp. 483-492
    • Chapman, K.B.1    Boeke, J.D.2
  • 8
    • 0029959408 scopus 로고    scopus 로고
    • Intramolecular structure in yeast introns aids the early steps of in vitro spliceosome assembly
    • Charpentier B, Rosbash M. 1996. Intramolecular structure in yeast introns aids the early steps of in vitro spliceosome assembly. RNA 2:509-522.
    • (1996) RNA , vol.2 , pp. 509-522
    • Charpentier, B.1    Rosbash, M.2
  • 9
    • 0028934876 scopus 로고
    • Identification and characterization of genes that are required for the accelerated degradation of mRNAs containing a premature translational termination codon
    • Cui Y, Hagan KW, Zhang S, Peltz SW. 1995. Identification and characterization of genes that are required for the accelerated degradation of mRNAs containing a premature translational termination codon. Genes & Dev 9:423-436.
    • (1995) Genes & Dev , vol.9 , pp. 423-436
    • Cui, Y.1    Hagan, K.W.2    Zhang, S.3    Peltz, S.W.4
  • 10
    • 0344300033 scopus 로고
    • Unexpected point mutations activate cryptic 3′ splice sites by perturbing a natural secondary structure within a yeast intron
    • Deshler JO, Rossi JJ. 1991. Unexpected point mutations activate cryptic 3′ splice sites by perturbing a natural secondary structure within a yeast intron. Genes & Dev 1:445-455.
    • (1991) Genes & Dev , vol.1 , pp. 445-455
    • Deshler, J.O.1    Rossi, J.J.2
  • 11
    • 0029960125 scopus 로고    scopus 로고
    • Molecular and genetic characterization of SLC1, a putative Saccharomyces cerevisiae homolog of the mammalian cytoplasmic dynein light chain 1
    • Dick T, Surana U, Chia W. 1996. Molecular and genetic characterization of SLC1, a putative Saccharomyces cerevisiae homolog of the mammalian cytoplasmic dynein light chain 1. Mol Gen Genet 251:38-43.
    • (1996) Mol Gen Genet , vol.251 , pp. 38-43
    • Dick, T.1    Surana, U.2    Chia, W.3
  • 12
    • 0029894792 scopus 로고    scopus 로고
    • The yeast genome project: What did we learn?
    • Dujon B. 1996. The yeast genome project: What did we learn? Trends Genet 12:263-270.
    • (1996) Trends Genet , vol.12 , pp. 263-270
    • Dujon, B.1
  • 13
    • 0345594514 scopus 로고
    • Pseudogenes in yeast
    • Fink GR. 1987. Pseudogenes in yeast. Cell 42:355-367.
    • (1987) Cell , vol.42 , pp. 355-367
    • Fink, G.R.1
  • 14
    • 0022519436 scopus 로고
    • Mutations in a yeast intron demonstrate the importance of specific conserved nucleotides for the two stages of nuclear mRNA splicing
    • Fouser LA, Friesen JD. 1986. Mutations in a yeast intron demonstrate the importance of specific conserved nucleotides for the two stages of nuclear mRNA splicing. Cell 45:81-93.
    • (1986) Cell , vol.45 , pp. 81-93
    • Fouser, L.A.1    Friesen, J.D.2
  • 15
    • 0023078349 scopus 로고
    • Effects on mRNA splicing of mutations in the 3′ region of the Saccharomyces cerevisiae actin intron
    • Fouser LA, Friesen JD. 1987. Effects on mRNA splicing of mutations in the 3′ region of the Saccharomyces cerevisiae actin intron. Mol Cell Biol 7:225-230.
    • (1987) Mol Cell Biol , vol.7 , pp. 225-230
    • Fouser, L.A.1    Friesen, J.D.2
  • 16
    • 0026440183 scopus 로고
    • An essential splicing factor, SLU7, mediates 3′ splice site choice in yeast
    • Frank D, Guthrie C. 1992. An essential splicing factor, SLU7, mediates 3′ splice site choice in yeast. Genes & Dev 6:2112-2124.
    • (1992) Genes & Dev , vol.6 , pp. 2112-2124
    • Frank, D.1    Guthrie, C.2
  • 18
    • 0027514174 scopus 로고
    • Splice site choice and splicing efficiency are positively influenced by pre-mRNA intramolecular base pairing in yeast
    • Goguel V, Rosbash M. 1993. Splice site choice and splicing efficiency are positively influenced by pre-mRNA intramolecular base pairing in yeast. Cell 72:893-901.
    • (1993) Cell , vol.72 , pp. 893-901
    • Goguel, V.1    Rosbash, M.2
  • 19
    • 0025762363 scopus 로고
    • Extended N-terminal sequencing of proteins of the large ribosomal subunit from yeast mitochondria
    • Grohmann L, Graack H, Kruft V, Choli T, Goldschmidt-Reisin S, Kitakawa M. 1991. Extended N-terminal sequencing of proteins of the large ribosomal subunit from yeast mitochondria. FEBS Lett 284:51-56.
    • (1991) FEBS Lett , vol.284 , pp. 51-56
    • Grohmann, L.1    Graack, H.2    Kruft, V.3    Choli, T.4    Goldschmidt-Reisin, S.5    Kitakawa, M.6
  • 20
    • 0023685544 scopus 로고
    • A survey on intron and exon lengths
    • Hawkins JD. 1988. A survey on intron and exon lengths. Nucleic Acids Res 16:9893-9908.
    • (1988) Nucleic Acids Res , vol.16 , pp. 9893-9908
    • Hawkins, J.D.1
  • 21
    • 0030773773 scopus 로고    scopus 로고
    • Intron self-complementarity enforces exon inclusion in a yeast pre-mRNA
    • Howe KJ, Ares M Jr. 1997. Intron self-complementarity enforces exon inclusion in a yeast pre-mRNA. Proc Natl Acad Sci USA 94:12467-12472.
    • (1997) Proc Natl Acad Sci USA , vol.94 , pp. 12467-12472
    • Howe, K.J.1    Ares M., Jr.2
  • 22
    • 0029887381 scopus 로고    scopus 로고
    • Hidden Markov models for sequence analysis: Extension and analysis of the basic method
    • Hughey R, Krogh A. 1996. Hidden Markov models for sequence analysis: Extension and analysis of the basic method. Cabios 12:95-107.
    • (1996) Cabios , vol.12 , pp. 95-107
    • Hughey, R.1    Krogh, A.2
  • 23
    • 0022348855 scopus 로고
    • A quantitative analysis of the effects of 5′ junction and TACTAAC box mutants and mutant combinations on yeast mRNA splicing
    • Jacquier A, Rodriguez JR, Rosbash M. 1985. A quantitative analysis of the effects of 5′ junction and TACTAAC box mutants and mutant combinations on yeast mRNA splicing. Cell 43: 423-430.
    • (1985) Cell , vol.43 , pp. 423-430
    • Jacquier, A.1    Rodriguez, J.R.2    Rosbash, M.3
  • 24
    • 0022524414 scopus 로고
    • RNA splicing and intron turnover are greatly diminished by a mutant yeast branchpoint
    • Jacquier A, Rosbash M. 1986. RNA splicing and intron turnover are greatly diminished by a mutant yeast branchpoint. Proc Natl Acad Sci USA 83:5835-5839.
    • (1986) Proc Natl Acad Sci USA , vol.83 , pp. 5835-5839
    • Jacquier, A.1    Rosbash, M.2
  • 26
    • 0029011462 scopus 로고
    • Automatic intron detection in nuclear DNA sequences of Saccharomyces cerevisiae
    • Kalogeropoulos A. 1995. Automatic intron detection in nuclear DNA sequences of Saccharomyces cerevisiae. Yeast 11:555-565.
    • (1995) Yeast , vol.11 , pp. 555-565
    • Kalogeropoulos, A.1
  • 27
    • 0027923620 scopus 로고
    • Role of U6 snRNA in 5′ splice site selection
    • Kandels-Lewis S, Seraphin B. 1993. Role of U6 snRNA in 5′ splice site selection. Science 262:2035-2039.
    • (1993) Science , vol.262 , pp. 2035-2039
    • Kandels-Lewis, S.1    Seraphin, B.2
  • 29
    • 0023806397 scopus 로고
    • Splicing and spliceosome formation of the yeast MATa1 transcript require a minimum distance from the 5′ splice site to the internal branch acceptor site
    • Kohrer K, Domdey H. 1988. Splicing and spliceosome formation of the yeast MATa1 transcript require a minimum distance from the 5′ splice site to the internal branch acceptor site. Nucleic Acids Res 16:9457-9475.
    • (1988) Nucleic Acids Res , vol.16 , pp. 9457-9475
    • Kohrer, K.1    Domdey, H.2
  • 30
    • 0025886782 scopus 로고
    • Similarities in RNA helicases
    • Koonin EV. 1991. Similarities in RNA helicases. Nature 352:290-293.
    • (1991) Nature , vol.352 , pp. 290-293
    • Koonin, E.V.1
  • 31
    • 0028181441 scopus 로고
    • Hidden Markov models in computational biology. Applications to protein modeling
    • Krogh A, Brown M, Mian IS, Sjolander K, Haussler D. 1994. Hidden Markov models in computational biology. Applications to protein modeling. J Mol Biol 235:1501-1531.
    • (1994) J Mol Biol , vol.235 , pp. 1501-1531
    • Krogh, A.1    Brown, M.2    Mian, I.S.3    Sjolander, K.4    Haussler, D.5
  • 32
    • 0027516055 scopus 로고
    • Mutational analysis of pre-mRNA splicing in Saccharomyces cerevisiae using a sensitive new reporter gene, CUP1
    • Lesser CF, Guthrie C. 1993a. Mutational analysis of pre-mRNA splicing in Saccharomyces cerevisiae using a sensitive new reporter gene, CUP1. Genetics 133:851-863.
    • (1993) Genetics , vol.133 , pp. 851-863
    • Lesser, C.F.1    Guthrie, C.2
  • 33
    • 0027739852 scopus 로고
    • Mutations in U6 snRNA that alter splice site specificity: Implications for the active site
    • Lesser CF, Guthrie C. 1993b. Mutations in U6 snRNA that alter splice site specificity: Implications for the active site. Science 262:1982-1988.
    • (1993) Science , vol.262 , pp. 1982-1988
    • Lesser, C.F.1    Guthrie, C.2
  • 34
    • 0029965321 scopus 로고    scopus 로고
    • An RNA structure involved in the feedback regulation of splicing and of translation is critical for biological fitness
    • Li B, Vilardell J, Warner JR. 1996. An RNA structure involved in the feedback regulation of splicing and of translation is critical for biological fitness. Proc Natl Acad Sci USA 93:1596-1600.
    • (1996) Proc Natl Acad Sci USA , vol.93 , pp. 1596-1600
    • Li, B.1    Vilardell, J.2    Warner, J.R.3
  • 35
    • 0029312150 scopus 로고
    • RNA structural patterns and splicing: Molecular basis for an RNA-based enhancer
    • Libri D, Stutz F, McCarthy T, Rosbash M. 1995. RNA structural patterns and splicing: Molecular basis for an RNA-based enhancer. RNA 1:425-436.
    • (1995) RNA , vol.1 , pp. 425-436
    • Libri, D.1    Stutz, F.2    McCarthy, T.3    Rosbash, M.4
  • 36
    • 0029974008 scopus 로고    scopus 로고
    • Removal of an intron with a unique 3′ branch site creates an amino-terminal protein sequence directing the scERV1 gene product to mitochondria
    • Lisowsky T. 1996. Removal of an intron with a unique 3′ branch site creates an amino-terminal protein sequence directing the scERV1 gene product to mitochondria. Yeast 12:1501-1510.
    • (1996) Yeast , vol.12 , pp. 1501-1510
    • Lisowsky, T.1
  • 37
    • 0027953888 scopus 로고
    • The two genes encoding yeast ribosomal protein s8 reside on different chromosomes, and are closely linked to the hsp70 stress protein genes SSA3 and SSA4
    • Logghe M, Molemans F, Fiers W, Contreras R. 1994. The two genes encoding yeast ribosomal protein S8 reside on different chromosomes, and are closely linked to the hsp70 stress protein genes SSA3 and SSA4. Yeast 10:1093-1100.
    • (1994) Yeast , vol.10 , pp. 1093-1100
    • Logghe, M.1    Molemans, F.2    Fiers, W.3    Contreras, R.4
  • 38
    • 0031565867 scopus 로고    scopus 로고
    • The yeast splice site revisited: New exon consensus from genomic analysis
    • Long M, de Souza SJ, Gilbert W. 1998. The yeast splice site revisited: New exon consensus from genomic analysis. Cell 91:739-740.
    • (1998) Cell , vol.91 , pp. 739-740
    • Long, M.1    De Souza, S.J.2    Gilbert, W.3
  • 39
    • 0026719621 scopus 로고
    • The structure and function of subtelomeric Y′ repeats in Saccharomyces cerevisiae
    • Louis EJ, Haber JE. 1992. The structure and function of subtelomeric Y′ repeats in Saccharomyces cerevisiae. Genetics 133:559-574.
    • (1992) . Genetics , vol.133 , pp. 559-574
    • Louis, E.J.1    Haber, J.E.2
  • 40
    • 0031909440 scopus 로고    scopus 로고
    • MOB1, an essential yeast gene required for completion of mitosis and maintenance of ploidy
    • Luca FC, Winey M. 1998. MOB1, an essential yeast gene required for completion of mitosis and maintenance of ploidy. Mol Biol Cell 9:29-46.
    • (1998) Mol Biol Cell , vol.9 , pp. 29-46
    • Luca, F.C.1    Winey, M.2
  • 41
    • 1842330298 scopus 로고    scopus 로고
    • The role of branchpoint-3′ splice site spacing and interaction between intron terminal nucleotides in 3′ splice site selection in saccharomyces cerevisiae
    • Luukkonen BGM, Seraphin B. 1997. The role of branchpoint-3′ splice site spacing and interaction between intron terminal nucleotides in 3′ splice site selection in Saccharomyces cerevisiae. EMBO J 16:779-792.
    • (1997) . EMBO J , vol.16 , pp. 779-792
    • Luukkonen, B.G.M.1    Seraphin, B.2
  • 42
    • 0030929421 scopus 로고    scopus 로고
    • Examination of the intron in the meiosis-specific recombination gene REC114 in Saccharomyces
    • Malone RE, Pittman DL, Nau JJ. 1997. Examination of the intron in the meiosis-specific recombination gene REC114 in Saccharomyces. Mol Gen Genet 255:410-419.
    • (1997) Mol Gen Genet , vol.255 , pp. 410-419
    • Malone, R.E.1    Pittman, D.L.2    Nau, J.J.3
  • 44
    • 0021429861 scopus 로고
    • The yeast MATa1 gene contains two introns
    • Miller AM. 1984. The yeast MATa1 gene contains two introns. EMBO J 3:1061-1065.
    • (1984) EMBO J , vol.3 , pp. 1061-1065
    • Miller, A.M.1
  • 45
    • 0021230316 scopus 로고
    • A yeast ribosomal protein gene whose intron is in the 5′ leader
    • Mitra G, Warner JR. 1984. A yeast ribosomal protein gene whose intron is in the 5′ leader. J Biol Chem 259:9218-9224.
    • (1984) J Biol Chem , vol.259 , pp. 9218-9224
    • Mitra, G.1    Warner, J.R.2
  • 46
    • 0026533349 scopus 로고
    • Yeast ribosomal proteins: XIII. Saccharomyces cerevisiae YL8A gene, interrupted with two introns, encodes a homolog of mammalian L7
    • Mizuta K, Hashimoto T, Otaka E. 1992. Yeast ribosomal proteins: XIII. Saccharomyces cerevisiae YL8A gene, interrupted with two introns, encodes a homolog of mammalian L7. Nucleic Acids Res 20:1011-1016.
    • (1992) Nucleic Acids Res , vol.20 , pp. 1011-1016
    • Mizuta, K.1    Hashimoto, T.2    Otaka, E.3
  • 47
    • 0029075601 scopus 로고
    • The evolutionary relationships between homologs of ribosomal YL8 protein and YL8-like proteins
    • Mizuta K, Hashimoto T, Otaka E. 1995. The evolutionary relationships between homologs of ribosomal YL8 protein and YL8-like proteins. Curr Genet 28:19-25.
    • (1995) Curr Genet , vol.28 , pp. 19-25
    • Mizuta, K.1    Hashimoto, T.2    Otaka, E.3
  • 48
    • 0025274019 scopus 로고
    • An intron in the genes for U3 small nucleolar RNAs of the yeast Saccharomyces cerevisiae
    • Myslinski E, Segault V, Branlant C. 1990. An intron in the genes for U3 small nucleolar RNAs of the yeast Saccharomyces cerevisiae. Science 247:1213-1216.
    • (1990) Science , vol.247 , pp. 1213-1216
    • Myslinski, E.1    Segault, V.2    Branlant, C.3
  • 50
    • 0023481389 scopus 로고
    • Specific accessory sequences in Saccharomyces cerevisiae introns control the assembly of pre-mRNAs into spliceosomes
    • Newman A. 1989. Specific accessory sequences in Saccharomyces cerevisiae introns control the assembly of pre-mRNAs into spliceosomes. EMBO J 6:3833-3839.
    • (1989) EMBO J , vol.6 , pp. 3833-3839
    • Newman, A.1
  • 52
    • 0030598839 scopus 로고    scopus 로고
    • The invariant U5 snRNA loop 1 sequence is dispensable for the first catalytic step of pre-mRNA splicing in yeast
    • O'Keefe RT, Norman C, Newman AJ. 1996. The invariant U5 snRNA loop 1 sequence is dispensable for the first catalytic step of pre-mRNA splicing in yeast. Cell 86:679-689.
    • (1996) Cell , vol.86 , pp. 679-689
    • O'Keefe, R.T.1    Norman, C.2    Newman, A.J.3
  • 53
    • 0021868427 scopus 로고
    • A point mutation in the conserved hexa-nucleotide at a yeast 5′ splice junction uncouples recognition, cleavage, and ligation
    • Parker R, Guthrie C. 1985. A point mutation in the conserved hexa-nucleotide at a yeast 5′ splice junction uncouples recognition, cleavage, and ligation. Cell 41:107-118.
    • (1985) Cell , vol.41 , pp. 107-118
    • Parker, R.1    Guthrie, C.2
  • 54
    • 0003736129 scopus 로고
    • Architecture of fungal introns: Implications for spliceosome assembly
    • Dudock B, Inouye M, eds. New York: Academic Press
    • Parker R, Patterson B. 1987. Architecture of fungal introns: Implications for spliceosome assembly. In: Dudock B, Inouye M, eds. Molecular biology of RNA, new perspectives. New York: Academic Press, pp 133-149.
    • (1987) Molecular Biology of RNA, New Perspectives , pp. 133-149
    • Parker, R.1    Patterson, B.2
  • 55
    • 0345162531 scopus 로고
    • Recognition of the TAC TAAC box during mRNA splicing in yeast involves base pairing to the U2-like snRNA
    • Parker R, Siliciano PG, Guthrie C. 1987. Recognition of the TAC TAAC box during mRNA splicing in yeast involves base pairing to the U2-like snRNA. Cell 41:107-118.
    • (1987) Cell , vol.41 , pp. 107-118
    • Parker, R.1    Siliciano, P.G.2    Guthrie, C.3
  • 56
    • 0026030643 scopus 로고
    • A U-rich tract enhances usage of an alternative 3′ splice site in yeast
    • Patterson B, Guthrie C. 1991. A U-rich tract enhances usage of an alternative 3′ splice site in yeast. Cell 64:181-187.
    • (1991) Cell , vol.64 , pp. 181-187
    • Patterson, B.1    Guthrie, C.2
  • 58
    • 0030912154 scopus 로고    scopus 로고
    • YRA1, an essential Saccharomyces cerevisiae gene, encodes a novel nuclear protein with RNA annealing activity
    • Portman DS, O'Connor JP, Dreyfuss G. 1997. YRA1, an essential Saccharomyces cerevisiae gene, encodes a novel nuclear protein with RNA annealing activity. RNA 3:527-537.
    • (1997) RNA , vol.3 , pp. 527-537
    • Portman, D.S.1    O'Connor, J.P.2    Dreyfuss, G.3
  • 60
    • 0030934772 scopus 로고    scopus 로고
    • In vivo commitment to splicing in yeast involves the nucleotide upstream from the branch site conserved sequence and the mud2 protein
    • Rain J-C, Legrain P. 1997. In vivo commitment to splicing in yeast involves the nucleotide upstream from the branch site conserved sequence and the Mud2 protein. EMBO J 16:1759-1771.
    • (1997) EMBO J , vol.16 , pp. 1759-1771
    • Rain, J.-C.1    Legrain, P.2
  • 61
    • 0030962027 scopus 로고    scopus 로고
    • A specific screen for oligosaccharyltransferase mutations identifies the 9 kDa OST5 protein required for optimal activity in vivo and in vitro
    • Reiss G, te Heesen S, Gilmore R, Zufferey R, Aebi M. 1997. A specific screen for oligosaccharyltransferase mutations identifies the 9 kDa OST5 protein required for optimal activity in vivo and in vitro. EMBO J 16:1164-1172.
    • (1997) EMBO J , vol.16 , pp. 1164-1172
    • Reiss, G.1    Te Heesen, S.2    Gilmore, R.3    Zufferey, R.4    Aebi, M.5
  • 62
    • 0028246944 scopus 로고
    • Prevalence and distribution of introns in non-ribosomal protein genes of yeast
    • Rodriguez-Medina JR, Rymond BC. 1994. Prevalence and distribution of introns in non-ribosomal protein genes of yeast. Mol Gen Genet 243:532-539.
    • (1994) Mol Gen Genet , vol.243 , pp. 532-539
    • Rodriguez-Medina, J.R.1    Rymond, B.C.2
  • 63
    • 0025979877 scopus 로고
    • Targeting, disruption, replacement, and allele rescue: Integrative DNA transformation in yeast
    • Rothstein R. 1991. Targeting, disruption, replacement, and allele rescue: Integrative DNA transformation in yeast. Methods Enzymol 194:281-301.
    • (1991) Methods Enzymol , vol.194 , pp. 281-301
    • Rothstein, R.1
  • 64
    • 0022424110 scopus 로고
    • An RNA processing activity that debranches lariats
    • Ruskin B, Green MR. 1985. An RNA processing activity that debranches lariats. Science 229:135-140.
    • (1985) Science , vol.229 , pp. 135-140
    • Ruskin, B.1    Green, M.R.2
  • 65
    • 0025285045 scopus 로고
    • RNA lariat debranching enzyme as a tool for analyzing RNA structure
    • Ruskin B, Green MR. 1990. RNA lariat debranching enzyme as a tool for analyzing RNA structure. Methods Enzymol 181:180-188.
    • (1990) Methods Enzymol , vol.181 , pp. 180-188
    • Ruskin, B.1    Green, M.R.2
  • 66
    • 0000520650 scopus 로고
    • Yeast pre-mRNA splicing
    • Broach JR, Pringle J, Jones EW, eds. Cold Spring Harbor, New York: Cold Spring Harbor Laboratory Press
    • Rymond B, Rosbash M. 1992. Yeast pre-mRNA splicing. In: Broach JR, Pringle J, Jones EW, eds. The molecular and cellular biology of the yeast Saccharomyces cerevisiae, Vol. 2. Cold Spring Harbor, New York: Cold Spring Harbor Laboratory Press, pp 143-192.
    • (1992) The Molecular and Cellular Biology of the Yeast Saccharomyces Cerevisiae , vol.2 , pp. 143-192
    • Rymond, B.1    Rosbash, M.2
  • 70
    • 0023663450 scopus 로고
    • The untranslated leader of nuclear COX4 gene of Saccharomyces cerevisiae contains an intron
    • Schneider JC, Guarente L. 1987. The untranslated leader of nuclear COX4 gene of Saccharomyces cerevisiae contains an intron. Nucleic Acids Res 15:3515-3529.
    • (1987) Nucleic Acids Res , vol.15 , pp. 3515-3529
    • Schneider, J.C.1    Guarente, L.2
  • 71
    • 0024062611 scopus 로고
    • A U1 snRNA:Pre-mRNA base pairing interaction is required early in yeast spliceosome assembly but does not uniquely define the 5′ cleavage site
    • Seraphin B, Kretzner L, Rosbash M. 1988. A U1 snRNA:pre-mRNA base pairing interaction is required early in yeast spliceosome assembly but does not uniquely define the 5′ cleavage site. EMBO J 7:2533-2538.
    • (1988) EMBO J , vol.7 , pp. 2533-2538
    • Seraphin, B.1    Kretzner, L.2    Rosbash, M.3
  • 72
    • 0024434426 scopus 로고
    • Mutational analysis of the interactions between U1 small nuclear RNA and pre-mRNA of yeast
    • Seraphin B, Rosbash M. 1989. Mutational analysis of the interactions between U1 small nuclear RNA and pre-mRNA of yeast. Gene 82:145-151.
    • (1989) Gene , vol.82 , pp. 145-151
    • Seraphin, B.1    Rosbash, M.2
  • 73
    • 0025087346 scopus 로고
    • Exon mutations uncouple 5′ splice site selection from U1 snRNA pairing
    • Seraphin B, Rosbash M. 1990. Exon mutations uncouple 5′ splice site selection from U1 snRNA pairing. Cell 63:619-629.
    • (1990) Cell , vol.63 , pp. 619-629
    • Seraphin, B.1    Rosbash, M.2
  • 74
    • 0024100924 scopus 로고
    • 5′ splice site selection in yeast: Genetic alterations in base-pairing with U1 reveal additional requirements
    • Siliciano PG, Guthrie C. 1988. 5′ splice site selection in yeast: Genetic alterations in base-pairing with U1 reveal additional requirements. Genes & Dev 2:1258-1267.
    • (1988) Genes & Dev , vol.2 , pp. 1258-1267
    • Siliciano, P.G.1    Guthrie, C.2
  • 75
    • 0027214101 scopus 로고
    • Scanning and competition between AGs are involved in 3′ splice site selection in mammalian introns
    • Smith CW, Chu TT, Nadal-Ginard B. 1993. Scanning and competition between AGs are involved in 3′ splice site selection in mammalian introns. Mol Cell Biol 13:4939-4952.
    • (1993) Mol Cell Biol , vol.13 , pp. 4939-4952
    • Smith, C.W.1    Chu, T.T.2    Nadal-Ginard, B.3
  • 76
    • 0032489021 scopus 로고    scopus 로고
    • Mechanical devices of the spliceosome: Motors, clocks, springs, and things
    • Staley JP, Guthrie C. 1998. Mechanical devices of the spliceosome: Motors, clocks, springs, and things. Cell 92:315-326.
    • (1998) Cell , vol.92 , pp. 315-326
    • Staley, J.P.1    Guthrie, C.2
  • 77
    • 0025057481 scopus 로고
    • Yeast mutants sensitive to antimicrotubule drugs define three genes that affect microtubule function
    • Stearns T, Hoyt MA, Botstein D. 1990. Yeast mutants sensitive to antimicrotubule drugs define three genes that affect microtubule function. Genetics 124:251-262.
    • (1990) Genetics , vol.124 , pp. 251-262
    • Stearns, T.1    Hoyt, M.A.2    Botstein, D.3
  • 78
    • 0029031713 scopus 로고
    • Extensive interactions of PRP8 protein with the 5′ and 3′ splice sites during splicing suggests a role in stabilization of exon alignment by U5 snRNA
    • Teigelkamp S, Newman AJ, Beggs JD. 1995. Extensive interactions of PRP8 protein with the 5′ and 3′ splice sites during splicing suggests a role in stabilization of exon alignment by U5 snRNA. EMBO J 14:2602-2612.
    • (1995) Embo J , vol.14 , pp. 2602-2612
    • Teigelkamp, S.1    Newman, A.J.2    Beggs, J.D.3
  • 79
    • 0023446833 scopus 로고
    • Yeast pre-mRNA splicing requires a minimum distance between the 5′ splice site and the internal branch acceptor site
    • Thompson-Jager S, Domdey H. 1987. Yeast pre-mRNA splicing requires a minimum distance between the 5′ splice site and the internal branch acceptor site. Mol Cell Biol 7:4010-4016.
    • (1987) Mol Cell Biol , vol.7 , pp. 4010-4016
    • Thompson-Jager, S.1    Domdey, H.2
  • 80
    • 0028046420 scopus 로고
    • The GCR1 gene of Saccharomyces cerevisiae is a split gene with an unusually long intron
    • Tornow J, Santangelo G. 1994. The GCR1 gene of Saccharomyces cerevisiae is a split gene with an unusually long intron. Genetics 138:493-505.
    • (1994) Genetics , vol.138 , pp. 493-505
    • Tornow, J.1    Santangelo, G.2
  • 81
    • 0029939182 scopus 로고    scopus 로고
    • Mutations in GCR3, a gene involved in the expression of glycolytic genes in Saccharomyces cerevisiae, suppress the temperature-sensitive growth of hpr1 mutants
    • Uemura H, Pandit S, Jigami Y, Sternglanz R. 1996. Mutations in GCR3, a gene involved in the expression of glycolytic genes in Saccharomyces cerevisiae, suppress the temperature-sensitive growth of hpr1 mutants. Genetics 142:1095-1013.
    • (1996) Genetics , vol.142 , pp. 1095-11013
    • Uemura, H.1    Pandit, S.2    Jigami, Y.3    Sternglanz, R.4
  • 82
    • 0029397324 scopus 로고
    • The second catalytic step of pre-mRNA splicing
    • Umen JG, Guthrie C. 1995. The second catalytic step of pre-mRNA splicing. RNA 1:869-885.
    • (1995) RNA , vol.1 , pp. 869-885
    • Umen, J.G.1    Guthrie, C.2
  • 83
    • 0031000833 scopus 로고    scopus 로고
    • Ribosomal protein l32 of saccharomyces cerevisiae influences both the splicing of its own transcript and the processing of rRNA
    • Vilardell J, Warner J. 1997. Ribosomal protein L32 of Saccharomyces cerevisiae influences both the splicing of its own transcript and the processing of rRNA. Mol Cell Biol 17:1959-1965.
    • (1997) Mol Cell Biol , vol.17 , pp. 1959-1965
    • Vilardell, J.1    Warner, J.2
  • 84
    • 0031814309 scopus 로고    scopus 로고
    • Processing of the intron-encoded U18 small nucleolar RNA in the yeast Saccharomyces cerevisiae relies on both exo-and endonucleolytic activities
    • Villa T, Ceradini F, Presutti C, Bozzoni I. 1998. Processing of the intron-encoded U18 small nucleolar RNA in the yeast Saccharomyces cerevisiae relies on both exo-and endonucleolytic activities. Mol Cell Biol 18:3376-3383.
    • (1998) Mol Cell Biol , vol.18 , pp. 3376-3383
    • Villa, T.1    Ceradini, F.2    Presutti, C.3    Bozzoni, I.4
  • 85
    • 0026660693 scopus 로고
    • The yeast omnipotent suppressor SUP46 encodes a ribosomal protein which is a functional and structural homolog of the Escherichia coli s4 ram protein
    • Vincent A, Liebman SW. 1992. The yeast omnipotent suppressor SUP46 encodes a ribosomal protein which is a functional and structural homolog of the Escherichia coli S4 ram protein. Genetics 132:375-386.
    • (1992) Genetics , vol.132 , pp. 375-386
    • Vincent, A.1    Liebman, S.W.2
  • 86
    • 0023047019 scopus 로고
    • Expression strategies of the yeast retrotransposon ty: A short sequence directs ribosomal frameshifting
    • Wilson W, Malim MH, Mellor J, Kingsman AJ, Kingsman SM. 1986. Expression strategies of the yeast retrotransposon Ty: A short sequence directs ribosomal frameshifting. Nucleic Acids Res 14:7001-7016
    • (1986) Nucleic Acids Res , vol.14 , pp. 7001-7016
    • Wilson, W.1    Malim, M.H.2    Mellor, J.3    Kingsman, A.J.4    Kingsman, S.M.5
  • 87
    • 0024763496 scopus 로고
    • Nuclear pre-mRNA splicing in yeast
    • Woolford JL Jr. 1989. Nuclear pre-mRNA splicing in yeast. Yeast 5:439-457.
    • (1989) Yeast , vol.5 , pp. 439-457
    • Woolford J.L., Jr.1
  • 88
    • 0026308783 scopus 로고
    • Efficient association of U2 snRNPs with pre-mRNA requires an essential U2 RNA structural element. Genes &
    • Zavanelli MI, Ares M Jr. 1991. Efficient association of U2 snRNPs with pre-mRNA requires an essential U2 RNA structural element. Genes & Dev 5:2521-2533.
    • (1991) Dev , vol.5 , pp. 2521-2533
    • Zavanelli, M.I.1    Ares M., Jr.2
  • 89
    • 0030742465 scopus 로고    scopus 로고
    • Functional and physical interaction between the yeast splicing factors Slu7 and Prp18
    • Zhang X, Schwer B. 1997. Functional and physical interaction between the yeast splicing factors Slu7 and Prp18. Nucleic Acids Res 25:2146-2152.
    • (1997) Nucleic Acids Res , vol.25 , pp. 2146-2152
    • Zhang, X.1    Schwer, B.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.