메뉴 건너뛰기




Volumn 24, Issue 12, 2008, Pages 590-594

Co-evolution of the branch site and SR proteins in eukaryotes

Author keywords

[No Author keywords available]

Indexed keywords

ARGININE; SERINE;

EID: 56349150399     PISSN: 01689525     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.tig.2008.10.004     Document Type: Short Survey
Times cited : (33)

References (24)
  • 1
    • 0037440652 scopus 로고    scopus 로고
    • Molecular evolution of eukaryotic genomes: hemiascomycetous yeast spliceosomal introns
    • Bon E., et al. Molecular evolution of eukaryotic genomes: hemiascomycetous yeast spliceosomal introns. Nucleic Acids Res. 31 (2003) 1121-1135
    • (2003) Nucleic Acids Res. , vol.31 , pp. 1121-1135
    • Bon, E.1
  • 2
    • 6344229798 scopus 로고    scopus 로고
    • Introns and splicing elements of five diverse fungi
    • Kupfer D.M., et al. Introns and splicing elements of five diverse fungi. Eukaryot. Cell 3 (2004) 1088-1100
    • (2004) Eukaryot. Cell , vol.3 , pp. 1088-1100
    • Kupfer, D.M.1
  • 3
    • 16344385067 scopus 로고    scopus 로고
    • Complex spliceosomal organization ancestral to extant eukaryotes
    • Collins L., and Penny D. Complex spliceosomal organization ancestral to extant eukaryotes. Mol. Biol. Evol. 22 (2005) 1053-1066
    • (2005) Mol. Biol. Evol. , vol.22 , pp. 1053-1066
    • Collins, L.1    Penny, D.2
  • 4
    • 34250707188 scopus 로고    scopus 로고
    • Coevolution of genomic intron number and splice sites
    • Irimia M., et al. Coevolution of genomic intron number and splice sites. Trends Genet. 23 (2007) 321-325
    • (2007) Trends Genet. , vol.23 , pp. 321-325
    • Irimia, M.1
  • 5
    • 38049029652 scopus 로고    scopus 로고
    • Large-scale comparative analysis of splicing signals and their corresponding splicing factors in eukaryotes
    • Schwartz S.H., et al. Large-scale comparative analysis of splicing signals and their corresponding splicing factors in eukaryotes. Genome Res. 18 (2008) 88-103
    • (2008) Genome Res. , vol.18 , pp. 88-103
    • Schwartz, S.H.1
  • 6
    • 0013394889 scopus 로고    scopus 로고
    • Mechanisms of alternative pre-messenger RNA splicing
    • Black D.L. Mechanisms of alternative pre-messenger RNA splicing. Annu. Rev. Biochem. 72 (2003) 291-336
    • (2003) Annu. Rev. Biochem. , vol.72 , pp. 291-336
    • Black, D.L.1
  • 7
    • 0030595187 scopus 로고    scopus 로고
    • Interaction of U2AF65 RS region with pre-mRNA branch point and promotion of base pairing with U2 snRNA
    • Valcarcel J., et al. Interaction of U2AF65 RS region with pre-mRNA branch point and promotion of base pairing with U2 snRNA. Science 273 (1996) 1706-1709
    • (1996) Science , vol.273 , pp. 1706-1709
    • Valcarcel, J.1
  • 8
    • 33745618668 scopus 로고    scopus 로고
    • A simple principle to explain the evolution of pre-mRNA splicing
    • Izquierdo J.M., and Valcarcel J. A simple principle to explain the evolution of pre-mRNA splicing. Genes Dev. 20 (2006) 1679-1684
    • (2006) Genes Dev. , vol.20 , pp. 1679-1684
    • Izquierdo, J.M.1    Valcarcel, J.2
  • 9
    • 1242316952 scopus 로고    scopus 로고
    • Arginine-serine-rich domains bound at splicing enhancers contact the branchpoint to promote prespliceosome assembly
    • Shen H., et al. Arginine-serine-rich domains bound at splicing enhancers contact the branchpoint to promote prespliceosome assembly. Mol. Cell 13 (2004) 367-376
    • (2004) Mol. Cell , vol.13 , pp. 367-376
    • Shen, H.1
  • 10
    • 8644268780 scopus 로고    scopus 로고
    • A pathway of sequential arginine-serine-rich domain-splicing signal interactions during mammalian spliceosome assembly
    • Shen H., and Green M.R. A pathway of sequential arginine-serine-rich domain-splicing signal interactions during mammalian spliceosome assembly. Mol. Cell 16 (2004) 363-373
    • (2004) Mol. Cell , vol.16 , pp. 363-373
    • Shen, H.1    Green, M.R.2
  • 11
    • 33745609509 scopus 로고    scopus 로고
    • RS domains contact splicing signals and promote splicing by a common mechanism in yeast through humans
    • Shen H., and Green M.R. RS domains contact splicing signals and promote splicing by a common mechanism in yeast through humans. Genes Dev. 20 (2006) 1755-1765
    • (2006) Genes Dev. , vol.20 , pp. 1755-1765
    • Shen, H.1    Green, M.R.2
  • 12
    • 0032054851 scopus 로고    scopus 로고
    • A coactivator of pre-mRNA splicing
    • Blencowe B.J., et al. A coactivator of pre-mRNA splicing. Genes Dev. 12 (1998) 996-1009
    • (1998) Genes Dev. , vol.12 , pp. 996-1009
    • Blencowe, B.J.1
  • 13
    • 0032478506 scopus 로고    scopus 로고
    • Human Tra2 proteins are sequence-specific activators of pre-mRNA splicing
    • Tacke R., et al. Human Tra2 proteins are sequence-specific activators of pre-mRNA splicing. Cell 93 (1998) 139-148
    • (1998) Cell , vol.93 , pp. 139-148
    • Tacke, R.1
  • 14
    • 30044435456 scopus 로고    scopus 로고
    • Systematic genome-wide annotation of spliceosomal proteins reveals differential gene family expansion
    • Barbosa-Morais N.L., et al. Systematic genome-wide annotation of spliceosomal proteins reveals differential gene family expansion. Genome Res. 16 (2006) 66-77
    • (2006) Genome Res. , vol.16 , pp. 66-77
    • Barbosa-Morais, N.L.1
  • 15
    • 12144252038 scopus 로고    scopus 로고
    • Exonic splicing enhancers in fission yeast: functional conservation demonstrates an early evolutionary origin
    • Webb C.J., et al. Exonic splicing enhancers in fission yeast: functional conservation demonstrates an early evolutionary origin. Genes Dev. 19 (2005) 242-254
    • (2005) Genes Dev. , vol.19 , pp. 242-254
    • Webb, C.J.1
  • 16
    • 0032800842 scopus 로고    scopus 로고
    • Characterization of a SR protein from Trypanosoma brucei with homology to RNA-binding cis-splicing proteins
    • Ismaili N., et al. Characterization of a SR protein from Trypanosoma brucei with homology to RNA-binding cis-splicing proteins. Mol. Biochem. Parasitol. 102 (1999) 103-115
    • (1999) Mol. Biochem. Parasitol. , vol.102 , pp. 103-115
    • Ismaili, N.1
  • 17
    • 0036009859 scopus 로고    scopus 로고
    • Defining a 5′ splice site by functional selection in the presence and absence of U1 snRNA 5′ end
    • Lund M., and Kjems J. Defining a 5′ splice site by functional selection in the presence and absence of U1 snRNA 5′ end. RNA 8 (2002) 166-179
    • (2002) RNA , vol.8 , pp. 166-179
    • Lund, M.1    Kjems, J.2
  • 18
    • 0032128255 scopus 로고    scopus 로고
    • Identification of functional exonic splicing enhancer motifs recognized by individual SR proteins
    • Liu H.X., et al. Identification of functional exonic splicing enhancer motifs recognized by individual SR proteins. Genes Dev. 12 (1998) 1998-2012
    • (1998) Genes Dev. , vol.12 , pp. 1998-2012
    • Liu, H.X.1
  • 19
    • 33751361304 scopus 로고    scopus 로고
    • Inference of splicing regulatory activities by sequence neighborhood analysis
    • Stadler M.B., et al. Inference of splicing regulatory activities by sequence neighborhood analysis. PLoS Genet. 2 (2006) e191
    • (2006) PLoS Genet. , vol.2
    • Stadler, M.B.1
  • 20
    • 0345099646 scopus 로고    scopus 로고
    • Arginine/serine repeats are sufficient to constitute a splicing activation domain
    • Philipps D., et al. Arginine/serine repeats are sufficient to constitute a splicing activation domain. Nucleic Acids Res. 31 (2003) 6502-6508
    • (2003) Nucleic Acids Res. , vol.31 , pp. 6502-6508
    • Philipps, D.1
  • 21
    • 0032827418 scopus 로고    scopus 로고
    • The protein kinase Clk/Sty directly modulates SR protein activity: both hyper- and hypophosphorylation inhibit splicing
    • Prasad J., et al. The protein kinase Clk/Sty directly modulates SR protein activity: both hyper- and hypophosphorylation inhibit splicing. Mol. Cell. Biol. 19 (1999) 6991-7000
    • (1999) Mol. Cell. Biol. , vol.19 , pp. 6991-7000
    • Prasad, J.1
  • 22
    • 29444439485 scopus 로고    scopus 로고
    • The biology of intron gain and loss
    • Jeffares D.C., et al. The biology of intron gain and loss. Trends Genet. 22 (2006) 16-22
    • (2006) Trends Genet. , vol.22 , pp. 16-22
    • Jeffares, D.C.1
  • 23
    • 5044222204 scopus 로고    scopus 로고
    • How did alternative splicing evolve?
    • Ast G. How did alternative splicing evolve?. Nat. Rev. Genet. 5 (2004) 773-782
    • (2004) Nat. Rev. Genet. , vol.5 , pp. 773-782
    • Ast, G.1
  • 24
    • 33845657405 scopus 로고    scopus 로고
    • SR proteins: a foot on the exon before the transition from intron to exon definition
    • Ram O., and Ast G. SR proteins: a foot on the exon before the transition from intron to exon definition. Trends Genet. 23 (2007) 5-7
    • (2007) Trends Genet. , vol.23 , pp. 5-7
    • Ram, O.1    Ast, G.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.