Pegas: An R package for population genetics with an integrated-modular approach

Bioinformatics

Volumn 26, Issue 3, 2010, Pages 419-420

  Paradis, Emmanuel ^a  

^a INSTITUT DE RECHERCHE POUR LE DÉVELOPPEMENT   (France)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BIOLOGY; COMPUTER PROGRAM; GENETIC DATABASE; HAPLOTYPE; METHODOLOGY; POPULATION GENETICS;

COMPUTATIONAL BIOLOGY; DATABASES, GENETIC; GENETICS, POPULATION; HAPLOTYPES; SOFTWARE;

EID: 77949527981     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btp696     Document Type: Note

References (9)

1. Chambers, J.M. (2008) Software for Data Analysis: Programming with R. Springer, New York.
2. Excoffier, L. and Heckel, G. (2006) Computer programs for population genetics data analysis: a survival guide. Nat. Rev. Genet., 7, 745-758.
3. Gentleman, R. (2008) R Programming for Bioinformatics. Chapman & Hall/CRC, Boca Raton.
4. Jombart, T. (2008) adegenet: a R package for the multivariate analysis of genetic markers. Bioinformatics, 24, 1403-1405.
5. Murrell, P. (2006) R Graphics. Chapman & Hall/CRC, Boca Raton, FL.
6. Paradis, E. (2006) Analysis of Phylogenetics and Evolution with R. Springer, New York.
7. Paradis, E. et al. (2004) APE: analyses of phylogenetics and evolution in R language. Bioinformatics, 20, 289-290.
8. R Development Core Team (2009) R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing Vienna, Austria.
9. Templeton, A.R. et al. (1992) A cladistic analysis of phenotypic association with haplotypes inferred from restriction endonuclease mapping and DNAsequence data. III. Cladogram estimation. Genetics, 132, 619-635.