-
1
-
-
84863986133
-
Functions of dna methylation: Islands, start sites, gene bodies and beyond
-
Jones, P. A. Functions of DNA methylation: islands, start sites, gene bodies and beyond. Nat. Rev. Genet. 13, 484-492 (2012).
-
(2012)
Nat. Rev. Genet.
, vol.13
, pp. 484-492
-
-
Jones, P.A.1
-
2
-
-
84865790047
-
An integrated encyclopedia of dna elements in the human genome
-
Consortium, E. P. et al. An integrated encyclopedia of DNA elements in the human genome. Nature 489, 57-74 (2012).
-
(2012)
Nature
, vol.489
, pp. 57-74
-
-
Consortium, E.P.1
-
3
-
-
84890172667
-
Global analysis of dna methylation variation in adipose tissue from twins reveals links to disease-Associated variants in distal regulatory elements
-
Grundberg, E. et al. Global analysis of DNA methylation variation in adipose tissue from twins reveals links to disease-Associated variants in distal regulatory elements. Am. J. Hum. Genet. 93, 876-890 (2013).
-
(2013)
Am. J. Hum. Genet.
, vol.93
, pp. 876-890
-
-
Grundberg, E.1
-
4
-
-
79953706343
-
Tobaccosmoking-related differential dna methylation: 27k discovery and replication
-
Breitling, L. P., Yang, R., Korn, B., Burwinkel, B., & Brenner, H. Tobaccosmoking-related differential DNA methylation: 27K discovery and replication. Am. J. Hum. Genet. 88, 450-457 (2011).
-
(2011)
Am. J. Hum. Genet.
, vol.88
, pp. 450-457
-
-
Breitling, L.P.1
Yang, R.2
Korn, B.3
Burwinkel, B.4
Brenner, H.5
-
5
-
-
84897489039
-
The relationship between dna methylation, genetic and expression inter-individual variation in untransformed human fibroblasts
-
Wagner, J. R. et al. The relationship between DNA methylation, genetic and expression inter-individual variation in untransformed human fibroblasts. Genome Biol. 15, R37 (2014).
-
(2014)
Genome Biol.
, vol.15
, pp. R37
-
-
Wagner, J.R.1
-
6
-
-
84897452599
-
Genome-wide dna methylation analysis of human pancreatic islets from type 2 diabetic and non-diabetic donors identifies candidate genes that influence insulin secretion
-
Dayeh, T. et al. Genome-wide DNA methylation analysis of human pancreatic islets from type 2 diabetic and non-diabetic donors identifies candidate genes that influence insulin secretion. PLoS Genet. 10, -1004160 (2014).
-
(2014)
PLoS Genet.
, vol.10
, pp. 1004160
-
-
Dayeh, T.1
-
7
-
-
84873576566
-
Epigenome-wide association data implicate dna methylation as an intermediary of genetic risk in rheumatoid arthritis
-
Liu, Y. et al. Epigenome-wide association data implicate DNA methylation as an intermediary of genetic risk in rheumatoid arthritis. Nat. Biotechnol. 31, 142-147 (2013).
-
(2013)
Nat. Biotechnol.
, vol.31
, pp. 142-147
-
-
Liu, Y.1
-
8
-
-
84921316380
-
Dna methylation and body-mass index: A genome-wide analysis
-
Dick, K. J. et al. DNA methylation and body-mass index: a genome-wide analysis. Lancet 383, 1990-1998 (2014).
-
(2014)
Lancet
, vol.383
, pp. 1990-1998
-
-
Dick, K.J.1
-
9
-
-
84865822182
-
Systematic localization of common disease-Associated variation in regulatory dna
-
Maurano, M. T. et al. Systematic localization of common disease-Associated variation in regulatory DNA. Science 337, 1190-1195 (2012).
-
(2012)
Science
, vol.337
, pp. 1190-1195
-
-
Maurano, M.T.1
-
10
-
-
79955583542
-
Mapping and analysis of chromatin state dynamics in nine human cell types
-
Ernst, J. et al. Mapping and analysis of chromatin state dynamics in nine human cell types. Nature 473, 43-49 (2011).
-
(2011)
Nature
, vol.473
, pp. 43-49
-
-
Ernst, J.1
-
11
-
-
84882884517
-
Charting a dynamic dna methylation landscape of the human genome
-
Ziller, M. J. et al. Charting a dynamic DNA methylation landscape of the human genome. Nature 500, 477-481 (2013).
-
(2013)
Nature
, vol.500
, pp. 477-481
-
-
Ziller, M.J.1
-
12
-
-
69749092741
-
High definition profiling of mammalian dna methylation by array capture and single molecule bisulfite sequencing
-
Hodges, E. et al. High definition profiling of mammalian DNA methylation by array capture and single molecule bisulfite sequencing. Genome Res. 19, 1593-1605 (2009).
-
(2009)
Genome Res.
, vol.19
, pp. 1593-1605
-
-
Hodges, E.1
-
13
-
-
67649884743
-
Fast and accurate short read alignment with burrows-wheeler transform
-
Li, H., & Durbin, R. Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25, 1754-1760 (2009).
-
(2009)
Bioinformatics
, vol.25
, pp. 1754-1760
-
-
Li, H.1
Durbin, R.2
-
14
-
-
58249088335
-
Duodenal switch improved standard biliopancreatic diversion: A retrospective study
-
Marceau, P. et al. Duodenal switch improved standard biliopancreatic diversion: a retrospective study. Surg. Obes. Relat. Dis. 5, 43-47 (2009).
-
(2009)
Surg. Obes. Relat. Dis.
, vol.5
, pp. 43-47
-
-
Marceau, P.1
-
15
-
-
0035897696
-
Expert panel on detection, e. Executive summary of the third report of the national cholesterol education program (ncep) expert panel on detection, evaluation, and treatment of high blood cholesterol in adults adult treatment panel iii)
-
Expert Panel on Detection, E. Executive summary of the third report of the National Cholesterol Education Program (NCEP) expert panel on Detection, Evaluation, and Treatment of high blood cholesterol in adults (Adult Treatment Panel III). JAMA 285, 2486 (2001).
-
(2001)
JAMA
, vol.285
, pp. 2486
-
-
-
16
-
-
84886834154
-
Identification of active regulatory regions from dna methylation data
-
Burger, L., Gaidatzis, D., Schübeler, D., & Stadler, M. B. Identification of active regulatory regions from DNA methylation data. Nucleic Acids Res. 41, -155-155 (2013).
-
(2013)
Nucleic Acids Res.
, vol.41
, pp. 155-155
-
-
Burger, L.1
Gaidatzis, D.2
Schübeler, D.3
Stadler, M.B.4
-
17
-
-
84990924267
-
Functional normalization of 450k methylation array data improves replication in large cancer studies
-
Fortin, J.-P. et al. Functional normalization of 450k methylation array data improves replication in large cancer studies. bioRxiv 15, 503 (2014).
-
(2014)
BioRxiv
, vol.15
, pp. 503
-
-
Fortin, J.-P.1
-
19
-
-
0035670640
-
Are twins and singletons comparable? A study of disease-related and lifestyle characteristics in adult women
-
Andrew, T. et al. Are twins and singletons comparable? A study of disease-related and lifestyle characteristics in adult women. Twin Res. 4, 464-477 (2001).
-
(2001)
Twin Res.
, vol.4
, pp. 464-477
-
-
Andrew, T.1
-
20
-
-
84888877924
-
Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin dna-binding proteins and nucleosome position
-
Buenrostro, J. D., Giresi, P. G., Zaba, L. C., Chang, H. Y., & Greenleaf, W. J. Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position. Nat. Methods 10, 1213-1218 (2013).
-
(2013)
Nat. Methods
, vol.10
, pp. 1213-1218
-
-
Buenrostro, J.D.1
Giresi, P.G.2
Zaba, L.C.3
Chang, H.Y.4
Greenleaf, W.J.5
-
21
-
-
67649216515
-
Cd36, a scavenger receptor involved in immunity, metabolism, angiogenesis, and behavior
-
Silverstein, R. L., & Febbraio, M. CD36, a scavenger receptor involved in immunity, metabolism, angiogenesis, and behavior. Sci. Signal. 2, r-3 (2009).
-
(2009)
Sci. Signal.
, vol.2
, pp. r-3
-
-
Silverstein, R.L.1
Febbraio, M.2
-
23
-
-
34547451564
-
Molecular basis of human cd36 gene mutations
-
Rać, M. E., Safranow, K., & Poncyljusz, W. Molecular basis of human CD36 gene mutations. Mol. Med. 13, 288 (2007).
-
(2007)
Mol. Med.
, vol.13
, pp. 288
-
-
Rać, M.E.1
Safranow, K.2
Poncyljusz, W.3
-
24
-
-
84902257688
-
Circulating scd36 is associated with unhealthy fat distribution and elevated circulating triglycerides in morbidly obese individuals
-
Knøsgaard, L., Thomsen, S., Støckel, M., Vestergaard, H., & Handberg, A. Circulating sCD36 is associated with unhealthy fat distribution and elevated circulating triglycerides in morbidly obese individuals. Nutr. Diabetes 4, -114 (2014).
-
(2014)
Nutr. Diabetes
, vol.4
, pp. 114
-
-
Knøsgaard, L.1
Thomsen, S.2
Støckel, M.3
Vestergaard, H.4
Handberg, A.5
-
25
-
-
84878828157
-
Genome-wide characterization of shared and distinct genetic components that influence blood lipid levels in ethnically diverse human populations
-
Coram, M. A. et al. Genome-wide characterization of shared and distinct genetic components that influence blood lipid levels in ethnically diverse human populations. Am. J. Hum. Genet. 92, 904-916 (2013).
-
(2013)
Am. J. Hum. Genet.
, vol.92
, pp. 904-916
-
-
Coram, M.A.1
-
26
-
-
79960556965
-
Epigenome-wide association studies for common human diseases
-
Rakyan, V. K., Down, T. A., Balding, D. J., & Beck, S. Epigenome-wide association studies for common human diseases. Nat. Rev. Genet. 12, 529-541 (2011).
-
(2011)
Nat. Rev. Genet.
, vol.12
, pp. 529-541
-
-
Rakyan, V.K.1
Down, T.A.2
Balding, D.J.3
Beck, S.4
-
27
-
-
84880561329
-
The origin of circulating cd36 in type 2 diabetes
-
Alkhatatbeh, M., Enjeti, A., Acharya, S., Thorne, R., & Lincz, L. The origin of circulating CD36 in type 2 diabetes. Nutr. Diabetes 3, -59 (2013).
-
(2013)
Nutr. Diabetes
, vol.3
, pp. 59
-
-
Alkhatatbeh, M.1
Enjeti, A.2
Acharya, S.3
Thorne, R.4
Lincz, L.5
-
28
-
-
84864462544
-
A map of the cis-regulatory sequences in the mouse genome
-
Shen, Y. et al. A map of the cis-regulatory sequences in the mouse genome. Nature 488, 116-120 (2012).
-
(2012)
Nature
, vol.488
, pp. 116-120
-
-
Shen, Y.1
-
29
-
-
84868134071
-
Single nucleotide analysis of cytosine methylation by whole-genome shotgun bisulfite sequencing
-
21.23. 21-21.23.
-
Johnson, M. D., Mueller, M., Game, L., & Aitman, T. J. Single nucleotide analysis of cytosine methylation by whole-genome shotgun bisulfite sequencing. Curr. Protoc. Mol. Biol. 21.23. 21-21.23. 28 (2012).
-
(2012)
Curr. Protoc. Mol. Biol.
, pp. 28
-
-
Johnson, M.D.1
Mueller, M.2
Game, L.3
Aitman, T.J.4
-
30
-
-
0031826757
-
Biliopancreatic diversion with duodenal switch
-
Marceau, P. et al. Biliopancreatic diversion with duodenal switch. World. J. Surg. 22, 947-954 (1998).
-
(1998)
World. J. Surg.
, vol.22
, pp. 947-954
-
-
Marceau, P.1
-
31
-
-
6344260341
-
A survey of genes differentially expressed in subcutaneous and visceral adipose tissue in men
-
Vohl, M. C. et al. A survey of genes differentially expressed in subcutaneous and visceral adipose tissue in men. Obes. Res. 12, 1217-1222 (2004).
-
(2004)
Obes. Res.
, vol.12
, pp. 1217-1222
-
-
Vohl, M.C.1
-
32
-
-
0015058419
-
Determination of plasma glucose by hexokinase-glucose-6-phosphate dehydrogenase method
-
Richterich, R., & Dauwalder, H. [Determination of plasma glucose by hexokinase-glucose-6-phosphate dehydrogenase method]. Schweiz. Med. Wochenschr. 101, 615-618 (1971).
-
(1971)
Schweiz. Med. Wochenschr.
, vol.101
, pp. 615-618
-
-
Richterich, R.1
Dauwalder, H.2
-
33
-
-
84863565553
-
Bis-snp: Combined dna methylation and snp calling for bisulfite-seq data
-
Liu, Y., Siegmund, K. D., Laird, P. W., & Berman, B. P. Bis-SNP: combined DNA METHYLATION and SNP calling for bisulfite-seq data. Genome Biol. 13, R61 (2012).
-
(2012)
Genome Biol.
, vol.13
, pp. R61
-
-
Liu, Y.1
Siegmund, K.D.2
Laird, P.W.3
Berman, B.P.4
-
34
-
-
33745297228
-
Regional differences in adipose tissue metabolism in women minor effect of obesity and body fat distribution
-
Tchernof, A. et al. Regional differences in adipose tissue metabolism in women minor effect of obesity and body fat distribution. Diabetes 55, 1353-1360 (2006).
-
(2006)
Diabetes
, vol.55
, pp. 1353-1360
-
-
Tchernof, A.1
-
35
-
-
84864483625
-
Robina: A user-friendly, integrated software solution for rna-seq-based transcriptomics
-
Lohse, M. et al. RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics. Nucleic Acids Res. 40, W622-W627 (2012).
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. W622-W627
-
-
Lohse, M.1
-
36
-
-
84866127830
-
Identifying chip-seq enrichment using macs
-
Feng, J., Liu, T., Qin, B., Zhang, Y., & Liu, X. S. Identifying ChIP-seq enrichment using MACS. Nat. Protoc. 7, 1728-1740 (2012).
-
(2012)
Nat. Protoc.
, vol.7
, pp. 1728-1740
-
-
Feng, J.1
Liu, T.2
Qin, B.3
Zhang, Y.4
Liu, X.S.5
-
37
-
-
84866742598
-
Association of lipa gene polymorphisms with obesityrelated metabolic complications among severely obese patients
-
Guenard, F. et al. Association of LIPA gene polymorphisms with obesityrelated metabolic complications among severely obese patients. Obesity 20, 2075-2082 (2012).
-
(2012)
Obesity
, vol.20
, pp. 2075-2082
-
-
Guenard, F.1
-
38
-
-
84887129039
-
Line-1 methylation in visceral adipose tissue of severely obese individuals is associated with metabolic syndrome status and related phenotypes
-
Turcot, V. et al. LINE-1 methylation in visceral adipose tissue of severely obese individuals is associated with metabolic syndrome status and related phenotypes. Clin. Epigenet. 4, 10 (2012).
-
(2012)
Clin. Epigenet.
, vol.4
, pp. 10
-
-
Turcot, V.1
-
39
-
-
65449136284
-
Tophat: Discovering splice junctions with rna-seq
-
Trapnell, C., Pachter, L., & Salzberg, S. L. TopHat: discovering splice junctions with RNA-Seq. Bioinformatics 25, 1105-1111 (2009).
-
(2009)
Bioinformatics
, vol.25
, pp. 1105-1111
-
-
Trapnell, C.1
Pachter, L.2
Salzberg, S.L.3
-
40
-
-
62349130698
-
Ultrafast and memory-efficient alignment of short dna sequences to the human genome
-
Langmead, B., Trapnell, C., Pop, M., & Salzberg, S. L. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol. 10, R25 (2009).
-
(2009)
Genome Biol.
, vol.10
, pp. R25
-
-
Langmead, B.1
Trapnell, C.2
Pop, M.3
Salzberg, S.L.4
-
41
-
-
77958471357
-
Differential expression analysis for sequence count data
-
Anders, S., & Huber, W. Differential expression analysis for sequence count data. Genome Biol. 11, R106 (2010).
-
(2010)
Genome Biol.
, vol.11
, pp. R106
-
-
Anders, S.1
Huber, W.2
|