메뉴 건너뛰기




Volumn 41, Issue 16, 2013, Pages

Identification of active regulatory regions from DNA methylation data

Author keywords

[No Author keywords available]

Indexed keywords

DNA;

EID: 84886834154     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkt599     Document Type: Article
Times cited : (155)

References (29)
  • 6
    • 78650747491 scopus 로고    scopus 로고
    • Discovery and characterization of chromatin states for systematic annotation of the human genome
    • Ernst,J. and Kellis,M. (2010) Discovery and characterization of chromatin states for systematic annotation of the human genome. Nat. Biotechnol., 28, 817-825.
    • (2010) Nat. Biotechnol. , vol.28 , pp. 817-825
    • Ernst, J.1    Kellis, M.2
  • 7
    • 51649129596 scopus 로고    scopus 로고
    • Lineage-specific polycomb targets and de novo DNA methylation define restriction and potential of neuronal progenitors
    • Mohn,F., Weber,M., Rebhan,M., Roloff,T.C., Richter,J., Stadler,M.B., Bibel,M. and Schubeler,D. (2008) Lineage-specific polycomb targets and de novo DNA methylation define restriction and potential of neuronal progenitors. Mol. Cell, 30, 755-766.
    • (2008) Mol. Cell , vol.30 , pp. 755-766
    • Mohn, F.1    Weber, M.2    Rebhan, M.3    Roloff, T.C.4    Richter, J.5    Stadler, M.B.6    Bibel, M.7    Schubeler, D.8
  • 12
    • 80052937538 scopus 로고    scopus 로고
    • Sperm methylation profiles reveal features of epigenetic inheritance and evolution in primates
    • Molaro,A., Hodges,E., Fang,F., Song,Q., McCombie,W.R., Hannon,G.J. and Smith,A.D. (2011) Sperm methylation profiles reveal features of epigenetic inheritance and evolution in primates. Cell, 146, 1029-1041.
    • (2011) Cell , vol.146 , pp. 1029-1041
    • Molaro, A.1    Hodges, E.2    Fang, F.3    Song, Q.4    McCombie, W.R.5    Hannon, G.J.6    Smith, A.D.7
  • 13
    • 79952970127 scopus 로고    scopus 로고
    • Hidden semi Markov models for multiple observation sequences: The mhsmm package for R
    • O'connell,J. and Hojsgaard,S. (2011) Hidden semi Markov models for multiple observation sequences: the mhsmm package for R. J. Stat. Softw., 39, 1-22.
    • (2011) J. Stat. Softw. , vol.39 , pp. 1-22
    • O'connell, J.1    Hojsgaard, S.2
  • 15
    • 84856498057 scopus 로고    scopus 로고
    • DNA methylome analysis using short bisulfite sequencing data
    • Krueger,F., Kreck,B., Franke,A. and Andrews,S.R. (2012) DNA methylome analysis using short bisulfite sequencing data. Nat. Methods, 9, 145-151.
    • (2012) Nat. Methods , vol.9 , pp. 145-151
    • Krueger, F.1    Kreck, B.2    Franke, A.3    Andrews, S.R.4
  • 16
    • 0024342297 scopus 로고
    • Cytosine methylation and the fate of CpG dinucleotides in vertebrate genomes
    • Cooper,D.N. and Krawczak,M. (1989) Cytosine methylation and the fate of CpG dinucleotides in vertebrate genomes. Hum. Genet., 83, 181-188.
    • (1989) Hum. Genet. , vol.83 , pp. 181-188
    • Cooper, D.N.1    Krawczak, M.2
  • 17
    • 84863565553 scopus 로고    scopus 로고
    • Bis-SNP: Combined DNA methylation and SNP calling for Bisulfite-seq data
    • Liu,Y., Siegmund,K.D., Laird,P.W. and Berman,B.P. (2012) Bis-SNP: combined DNA methylation and SNP calling for Bisulfite-seq data. Genome Biol., 13, R61.
    • (2012) Genome Biol. , vol.13
    • Liu, Y.1    Siegmund, K.D.2    Laird, P.W.3    Berman, B.P.4
  • 22
    • 80052918929 scopus 로고    scopus 로고
    • Directional DNA methylation changes and complex intermediate states accompany lineage specificity in the adult hematopoietic compartment
    • Hodges,E., Molaro,A., Dos Santos,C.O., Thekkat,P., Song,Q., Uren,P.J., Park,J., Butler,J., Rafii,S., McCombie,W.R. et al. (2011) Directional DNA methylation changes and complex intermediate states accompany lineage specificity in the adult hematopoietic compartment. Mol. Cell, 44, 17-28.
    • (2011) Mol. Cell , vol.44 , pp. 17-28
    • Hodges, E.1    Molaro, A.2    Dos Santos, C.O.3    Thekkat, P.4    Song, Q.5    Uren, P.J.6    Park, J.7    Butler, J.8    Rafii, S.9    McCombie, W.R.10
  • 24
    • 69649084228 scopus 로고    scopus 로고
    • The transcriptional foundation of pluripotency
    • Chambers,I. and Tomlinson,S.R. (2009) The transcriptional foundation of pluripotency. Development, 136, 2311-2322.
    • (2009) Development , vol.136 , pp. 2311-2322
    • Chambers, I.1    Tomlinson, S.R.2
  • 27
    • 0028136726 scopus 로고
    • Requirement of transcription factor PU.1 in the development of multiple hematopoietic lineages
    • Scott,E.W., Simon,M.C., Anastasi,J. and Singh,H. (1994) Requirement of transcription factor PU.1 in the development of multiple hematopoietic lineages. Science, 265, 1573-1577.
    • (1994) Science , vol.265 , pp. 1573-1577
    • Scott, E.W.1    Simon, M.C.2    Anastasi, J.3    Singh, H.4
  • 29
    • 67649837030 scopus 로고    scopus 로고
    • Rtracklayer: An R package for interfacing with genome browsers
    • Lawrence,M., Gentleman,R. and Carey,V. (2009) rtracklayer: an R package for interfacing with genome browsers. Bioinformatics, 25, 1841-1842.
    • (2009) Bioinformatics , vol.25 , pp. 1841-1842
    • Lawrence, M.1    Gentleman, R.2    Carey, V.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.