메뉴 건너뛰기




Volumn 43, Issue 7, 2015, Pages 3712-3725

An Lnc RNA (GAS5)/SnoRNA-derived piRNA induces activation of TRAIL gene by site-specifically recruiting MLL/COMPASS-like complexes

Author keywords

[No Author keywords available]

Indexed keywords

DEATH RECEPTOR 4; DEATH RECEPTOR 5; DOXORUBICIN; LONG UNTRANSLATED RNA; MEMBRANE PROTEIN; PIWI INTERACTING RNA; PROTEIN GAS5; PROTEIN MLL3; PROTEIN PIWIL1; PROTEIN PIWIL2; PROTEIN PIWIL3; PROTEIN PIWIL4; PROTEIN UTX; SMALL NUCLEOLAR RNA; SMALL UNTRANSLATED RNA; TUMOR NECROSIS FACTOR RELATED APOPTOSIS INDUCING LIGAND; UNCLASSIFIED DRUG; GAS5 LONG NON-CODING RNA, HUMAN; HISTONE LYSINE METHYLTRANSFERASE; MIXED LINEAGE LEUKEMIA PROTEIN; MLL PROTEIN, HUMAN; SMALL INTERFERING RNA; TNFSF10 PROTEIN, HUMAN;

EID: 84930503350     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkv214     Document Type: Article
Times cited : (111)

References (61)
  • 1
    • 84880917068 scopus 로고    scopus 로고
    • PIWI-interacting RNAs: From generation to transgenerational epigenetics
    • Luteijn, M.J. and Ketting, R.F. (2013) PIWI-interacting RNAs: from generation to transgenerational epigenetics. Nat. Rev. Genet., 14, 523-534.
    • (2013) Nat. Rev. Genet. , vol.14 , pp. 523-534
    • Luteijn, M.J.1    Ketting, R.F.2
  • 2
    • 33745336617 scopus 로고    scopus 로고
    • A germline-specifc class of small RNAs binds mammalian Piwi proteins
    • Girard, A., Sachidanandam, R., Hannon, G.J. and Carmell, M.A. (2006) A germline-specifc class of small RNAs binds mammalian Piwi proteins. Nature, 442, 199-202.
    • (2006) Nature , vol.442 , pp. 199-202
    • Girard, A.1    Sachidanandam, R.2    Hannon, G.J.3    Carmell, M.A.4
  • 3
    • 33947273235 scopus 로고    scopus 로고
    • Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila
    • Brennecke, J., Aravin, A.A., Stark, A., Dus, M., Kellis, M., Sachidanandam, R. and Hannon, G.J. (2007) Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila. Cell, 128, 1089-1103.
    • (2007) Cell , vol.128 , pp. 1089-1103
    • Brennecke, J.1    Aravin, A.A.2    Stark, A.3    Dus, M.4    Kellis, M.5    Sachidanandam, R.6    Hannon, G.J.7
  • 5
    • 0033966406 scopus 로고    scopus 로고
    • Piwi encodes a nucleoplasmic factor whose activity modulates the number and division rate of germline stem cells
    • Cox, D.N., Chao, A. and Lin, H.F. (2000) piwi encodes a nucleoplasmic factor whose activity modulates the number and division rate of germline stem cells. Development, 127, 503-514.
    • (2000) Development , vol.127 , pp. 503-514
    • Cox, D.N.1    Chao, A.2    Lin, H.F.3
  • 6
    • 0030755562 scopus 로고    scopus 로고
    • A novel group of pumilio mutations affects the asymmetric division of germline stem cells in the Drosophila ovary
    • Lin, H. and Spradling, A.C. (1997) A novel group of pumilio mutations affects the asymmetric division of germline stem cells in the Drosophila ovary. Development, 124, 2463-2476.
    • (1997) Development , vol.124 , pp. 2463-2476
    • Lin, H.1    Spradling, A.C.2
  • 9
    • 84870060785 scopus 로고    scopus 로고
    • Transcriptional silencing of transposons by Piwi and maelstrom and its impact on chromatin state and gene expression
    • Sienski, G., Donertas, D. and Brennecke, J. (2012) Transcriptional silencing of transposons by Piwi and maelstrom and its impact on chromatin state and gene expression. Cell, 151, 964-980.
    • (2012) Cell , vol.151 , pp. 964-980
    • Sienski, G.1    Donertas, D.2    Brennecke, J.3
  • 10
    • 84860320656 scopus 로고    scopus 로고
    • A role for neuronal piRNAs in the epigenetic control of memory-related synaptic plasticity
    • Rajasethupathy, P., Antonov, I., Sheridan, R., Frey, S., Sander, C, Tuschl, T and Kandel, E.R. (2012) A role for neuronal piRNAs in the epigenetic control of memory-related synaptic plasticity. Cell, 149, 693-707.
    • (2012) Cell , vol.149 , pp. 693-707
    • Rajasethupathy, P.1    Antonov, I.2    Sheridan, R.3    Frey, S.4    Sander, C.5    Tuschl, T.6    Kandel, E.R.7
  • 12
    • 84892599690 scopus 로고    scopus 로고
    • PIWI proteins and PIWI-interacting RNAs in the soma
    • Ross, R.J., Weiner, M.M. and Lin, H. (2014) PIWI proteins and PIWI-interacting RNAs in the soma. Nature, 505, 353-359.
    • (2014) Nature , vol.505 , pp. 353-359
    • Ross, R.J.1    Weiner, M.M.2    Lin, H.3
  • 13
    • 34248160438 scopus 로고    scopus 로고
    • Developmentally regulated piRNA clusters implicate MILI in transposon control
    • Aravin, A.A., Sachidanandam, R., Girard, A., Fejes-Toth, K. and Hannon, G. J. (2007) Developmentally regulated piRNA clusters implicate MILI in transposon control. Science, 316, 744-747.
    • (2007) Science , vol.316 , pp. 744-747
    • Aravin, A.A.1    Sachidanandam, R.2    Girard, A.3    Fejes-Toth, K.4    Hannon, G.J.5
  • 14
    • 84863631177 scopus 로고    scopus 로고
    • PiRNAs initiate an epigenetic memory of nonself RNA in the C elegans germline
    • Shirayama, M., Seth, M., Lee, H.C, Gu, W., Ishidate, T, Conte, D. Jr and Mello, C.C. (2012) piRNAs initiate an epigenetic memory of nonself RNA in the C. elegans germline. Cell, 150, 65-77.
    • (2012) Cell , vol.150 , pp. 65-77
    • Shirayama, M.1    Seth, M.2    Lee, H.C.3    Gu, W.4    Ishidate, T.5    Conte, Jr.D.6    Mello, C.C.7
  • 16
    • 36048937264 scopus 로고    scopus 로고
    • An epigenetic activation role of Piwi and a Piwi-associated piRNA in Drosophila melanogaster
    • Yin, H. and Lin, H. (2007) An epigenetic activation role of Piwi and a Piwi-associated piRNA in Drosophila melanogaster. Nature, 450, 304-308.
    • (2007) Nature , vol.450 , pp. 304-308
    • Yin, H.1    Lin, H.2
  • 17
    • 81955161868 scopus 로고    scopus 로고
    • PiR-823, a novel non-coding small RNA, demonstrates in vitro and in vivo tumor suppressive activity in human gastric cancer cells
    • Cheng, J., Deng, H., Xiao, B., Zhou, H., Zhou, F., Shen, Z. and Guo, J. (2012) piR-823, a novel non-coding small RNA, demonstrates in vitro and in vivo tumor suppressive activity in human gastric cancer cells. Cancer Lett., 315, 12-17.
    • (2012) Cancer Lett. , vol.315 , pp. 12-17
    • Cheng, J.1    Deng, H.2    Xiao, B.3    Zhou, H.4    Zhou, F.5    Shen, Z.6    Guo, J.7
  • 18
  • 19
    • 39549110203 scopus 로고    scopus 로고
    • MicroRNA detection by northern blotting using locked nucleic acid probes
    • Varallyay, E., Burgyan, J. and Havelda, Z. (2008) MicroRNA detection by northern blotting using locked nucleic acid probes. Nat. Protoc., 3, 190-196.
    • (2008) Nat. Protoc. , vol.3 , pp. 190-196
    • Varallyay, E.1    Burgyan, J.2    Havelda, Z.3
  • 20
    • 84865473920 scopus 로고    scopus 로고
    • APOBEC3G inhibits microRNA-mediated repression of translation by interfering with the interaction between Argonaute-2 and MOV10
    • Liu, C, Zhang, X., Huang, F., Yang, B., Li, J., Liu, B., Luo, H., Zhang, P and Zhang, H. (2012) APOBEC3G inhibits microRNA-mediated repression of translation by interfering with the interaction between Argonaute-2 and MOV10. J. Biol. Chem., 287, 29373-29383.
    • (2012) J. Biol. Chem. , vol.287 , pp. 29373-29383
    • Liu, C.1    Zhang, X.2    Huang, F.3    Yang, B.4    Li, J.5    Liu, B.6    Luo, H.7    Zhang, P.8    Zhang, H.9
  • 21
    • 84869025816 scopus 로고    scopus 로고
    • RTL-P: A sensitive approach for detecting sites of 2'-O-methylation in RNA molecules
    • Dong, Z.W., Shao, P, Diao, L.T, Zhou, H., Yu, C.H. and Qu, L.H. (2012) RTL-P: a sensitive approach for detecting sites of 2'-O-methylation in RNA molecules. Nucleic Acids Res., 40, e157.
    • (2012) Nucleic Acids Res. , vol.40 , pp. e157
    • Dong, Z.W.1    Shao, P.2    Diao, L.T.3    Zhou, H.4    Yu, C.H.5    Qu, L.H.6
  • 24
    • 58249098615 scopus 로고    scopus 로고
    • GAS5, a non-protein-coding RNA, controls apoptosis and is downregulated in breast cancer
    • Mourtada-Maarabouni, M., Pickard, M.R., Hedge, V.L., Farzaneh, F. and Williams, GT (2009) GAS5, a non-protein-coding RNA, controls apoptosis and is downregulated in breast cancer. Oncogene, 28, 195-208.
    • (2009) Oncogene , vol.28 , pp. 195-208
    • Mourtada-Maarabouni, M.1    Pickard, M.R.2    Hedge, V.L.3    Farzaneh, F.4    Williams, G.T.5
  • 25
    • 0031756336 scopus 로고    scopus 로고
    • Classifcation of gas5 as a Multi-Small-Nucleolar-RNA (snoRNA) Host Gene and a Member of the 5'-Terminal Oligopyrimidine Gene Family Reveals Common Features of snoRNA Host Genes
    • Smith, C.M. and Steitz, J.A. (1998) Classifcation of gas5 as a Multi-Small-Nucleolar-RNA (snoRNA) Host Gene and a Member of the 5'-Terminal Oligopyrimidine Gene Family Reveals Common Features of snoRNA Host Genes. Mol. Cell Biol., 18, 6897-6909.
    • (1998) Mol. Cell Biol. , vol.18 , pp. 6897-6909
    • Smith, C.M.1    Steitz, J.A.2
  • 26
    • 33847187076 scopus 로고    scopus 로고
    • Non-coding RNAs: Lessons from the small nuclear and small nucleolar RNAs
    • Matera, A.G, Terns, R.M. and Terns, M.P (2007) Non-coding RNAs: lessons from the small nuclear and small nucleolar RNAs. Nat. Rev. Mol. Cell Biol., 8, 209-220.
    • (2007) Nat. Rev. Mol. Cell Biol. , vol.8 , pp. 209-220
    • Matera, A.G.1    Terns, R.M.2    Terns, M.P.3
  • 27
    • 84870975709 scopus 로고    scopus 로고
    • Processing of snoRNAs as a new source of regulatory non-coding RNAs: SnoRNA fragments form a new class of functional RNAs
    • Falaleeva, M. and Stamm, S. (2013) Processing of snoRNAs as a new source of regulatory non-coding RNAs: snoRNA fragments form a new class of functional RNAs. Bioessays, 35, 46-54.
    • (2013) Bioessays , vol.35 , pp. 46-54
    • Falaleeva, M.1    Stamm, S.2
  • 28
    • 30844442607 scopus 로고    scopus 로고
    • The snoRNA HBII-52 regulates alternative splicing of the serotonin receptor 2C
    • Kishore, S. and Stamm, S. (2006) The snoRNA HBII-52 regulates alternative splicing of the serotonin receptor 2C. Science, 311, 230-232.
    • (2006) Science , vol.311 , pp. 230-232
    • Kishore, S.1    Stamm, S.2
  • 29
    • 52649109068 scopus 로고    scopus 로고
    • The TRAIL apoptotic pathway in cancer onset, progression and therapy
    • Johnstone, R.W., Frew, A.J. and Smyth, M.J. (2008) The TRAIL apoptotic pathway in cancer onset, progression and therapy. Nat. Rev. Cancer, 8, 782-798.
    • (2008) Nat. Rev. Cancer , vol.8 , pp. 782-798
    • Johnstone, R.W.1    Frew, A.J.2    Smyth, M.J.3
  • 31
    • 34247259831 scopus 로고    scopus 로고
    • Mouse Piwi-interacting RNAs are 2'-O-methylated at their 3' termini
    • Kirino, Y. and Mourelatos, Z. (2007) Mouse Piwi-interacting RNAs are 2'-O-methylated at their 3' termini. Nat. Struct. Mol Biol, 14, 347-348.
    • (2007) Nat. Struct. Mol Biol , vol.14 , pp. 347-348
    • Kirino, Y.1    Mourelatos, Z.2
  • 32
    • 0037133942 scopus 로고    scopus 로고
    • Small nucleolar RNAs: An abundant group of noncoding RNAs with diverse cellular functions
    • Kiss, T. (2002) Small nucleolar RNAs: an abundant group of noncoding RNAs with diverse cellular functions. Cell, 109, 145-148.
    • (2002) Cell , vol.109 , pp. 145-148
    • Kiss, T.1
  • 33
    • 40349094597 scopus 로고    scopus 로고
    • MicroRNA-373 induces expression of genes with complementary promoter sequences
    • Place, R.F., Li, L.C, Pookot, D., Noonan, E.J. and Dahiya, R. (2008) MicroRNA-373 induces expression of genes with complementary promoter sequences. Proc. Natl. Acad. Sci. U.S.A., 105, 1608-1613.
    • (2008) Proc. Natl. Acad. Sci. U.S.A. , vol.105 , pp. 1608-1613
    • Place, R.F.1    Li, L.C.2    Pookot, D.3    Noonan, E.J.4    Dahiya, R.5
  • 36
    • 84875256553 scopus 로고    scopus 로고
    • A major epigenetic programming mechanism guided by piRNAs
    • Huang, X.A., Yin, H., Sweeney, S., Raha, D., Snyder, M. and Lin, H. (2013) A major epigenetic programming mechanism guided by piRNAs. Dev. Cell, 24, 502-516.
    • (2013) Dev. Cell , vol.24 , pp. 502-516
    • Huang, X.A.1    Yin, H.2    Sweeney, S.3    Raha, D.4    Snyder, M.5    Lin, H.6
  • 37
    • 4644237189 scopus 로고    scopus 로고
    • Fast and effective prediction of microRNA/target duplexes
    • Rehmsmeier, M., Steffen, P, Hochsmann, M. and Giegerich, R. (2004) Fast and effective prediction of microRNA/target duplexes. RNA, 10, 1507-1517.
    • (2004) RNA , vol.10 , pp. 1507-1517
    • Rehmsmeier, M.1    Steffen, P.2    Hochsmann, M.3    Giegerich, R.4
  • 38
    • 84859893371 scopus 로고    scopus 로고
    • Histone methylation: A dynamic mark in health, disease and inheritance
    • Greer, E.L. and Shi, Y (2012) Histone methylation: a dynamic mark in health, disease and inheritance. Nat. Rev. Genet., 13, 343-357.
    • (2012) Nat. Rev. Genet. , vol.13 , pp. 343-357
    • Greer, E.L.1    Shi, Y.2
  • 39
    • 84861870951 scopus 로고    scopus 로고
    • The COMPASS family of histone H3K4 methylases: Mechanisms of regulation in development and disease pathogenesis
    • Shilatifard, A. (2012) The COMPASS family of histone H3K4 methylases: mechanisms of regulation in development and disease pathogenesis. Annu. Rev. Biochem., 81, 65-95.
    • (2012) Annu. Rev. Biochem. , vol.81 , pp. 65-95
    • Shilatifard, A.1
  • 40
    • 39449088247 scopus 로고    scopus 로고
    • Human CpG binding protein interacts with MLL1, MLL2 and hSet1 and regulates Hox gene expression
    • Ansari, K.I., Mishra, B.P and Mandal, S.S. (2008) Human CpG binding protein interacts with MLL1, MLL2 and hSet1 and regulates Hox gene expression. Biochim. Biophys. Acta, 1779, 66-73.
    • (2008) Biochim. Biophys. Acta , vol.1779 , pp. 66-73
    • Ansari, K.I.1    Mishra, B.P.2    Mandal, S.S.3
  • 46
    • 0141705424 scopus 로고    scopus 로고
    • Synergistic interactions of chemotherapeutic drugs and tumor necrosis factor-related apoptosis-inducing ligand/Apo-2 ligand on apoptosis and on regression of breast carcinoma in vivo
    • Singh, TR., Shankar, S., Chen, X., Asim, M. and Srivastava, R.K (2003) Synergistic interactions of chemotherapeutic drugs and tumor necrosis factor-related apoptosis-inducing ligand/Apo-2 ligand on apoptosis and on regression of breast carcinoma in vivo. Cancer Res., 63, 5390-5400.
    • (2003) Cancer Res. , vol.63 , pp. 5390-5400
    • Singh, T.R.1    Shankar, S.2    Chen, X.3    Asim, M.4    Srivastava, R.K.5
  • 47
    • 20444417108 scopus 로고    scopus 로고
    • WDR5 associates with histone H3 methylated at K4 and is essential for H3 K4 methylation and vertebrate development
    • Wysocka, J., Swigut, T., Milne, T.A., Dou, Y., Zhang, X., Burlingame, A.L., Roeder, R.G., Brivanlou, A.H. and Allis, C.D. (2005) WDR5 associates with histone H3 methylated at K4 and is essential for H3 K4 methylation and vertebrate development. Cell, 121, 859-872.
    • (2005) Cell , vol.121 , pp. 859-872
    • Wysocka, J.1    Swigut, T.2    Milne, T.A.3    Dou, Y.4    Zhang, X.5    Burlingame, A.L.6    Roeder, R.G.7    Brivanlou, A.H.8    Allis, C.D.9
  • 48
    • 79952804747 scopus 로고    scopus 로고
    • A novel non-SET domain multi-subunit methyltransferase required for sequential nucleosomal histone H3 methylation by the mixed lineage leukemia protein-1 (MLL1) core complex
    • Patel, A., Vought, V.E., Dharmarajan, V. and Cosgrove, M.S. (2011) A novel non-SET domain multi-subunit methyltransferase required for sequential nucleosomal histone H3 methylation by the mixed lineage leukemia protein-1 (MLL1) core complex. J. Biol. Chem., 286, 3359-3369.
    • (2011) J. Biol. Chem. , vol.286 , pp. 3359-3369
    • Patel, A.1    Vought, V.E.2    Dharmarajan, V.3    Cosgrove, M.S.4
  • 49
    • 84872533627 scopus 로고    scopus 로고
    • RNA interference in the nucleus: Roles for small RNAs in transcription, epigenetics and beyond
    • Castel, S.E. and Martienssen, R.A. (2013) RNA interference in the nucleus: roles for small RNAs in transcription, epigenetics and beyond. Nat. Rev. Genet., 14, 100-112.
    • (2013) Nat. Rev. Genet. , vol.14 , pp. 100-112
    • Castel, S.E.1    Martienssen, R.A.2
  • 50
    • 0023765743 scopus 로고
    • Genes specifcally expressed at growth arrest of mammalian cells
    • Schneider, C., King, R.M. and Philipson, L. (1988) Genes specifcally expressed at growth arrest of mammalian cells. Cell, 54, 787-793.
    • (1988) Cell , vol.54 , pp. 787-793
    • Schneider, C.1    King, R.M.2    Philipson, L.3
  • 54
    • 78650582970 scopus 로고    scopus 로고
    • Histone lysine methylation and demethylation pathways in cancer
    • Varier, R.A. and Timmers, H.T. (2011) Histone lysine methylation and demethylation pathways in cancer. Biochim. Bbiophys. Acta, 1815, 75-89.
    • (2011) Biochim. Bbiophys. Acta , vol.1815 , pp. 75-89
    • Varier, R.A.1    Timmers, H.T.2
  • 56
    • 84864869260 scopus 로고    scopus 로고
    • Sequencing histone-modifying enzymes identifes UTX mutations in acute lymphoblastic leukemia
    • Mar, B., Bullinger, L., Basu, E., Schlis, K., Silverman, L., Döhner, K. and Armstrong, S. (2012) Sequencing histone-modifying enzymes identifes UTX mutations in acute lymphoblastic leukemia. Leukemia, 26, 1881-1883.
    • (2012) Leukemia , vol.26 , pp. 1881-1883
    • Mar, B.1    Bullinger, L.2    Basu, E.3    Schlis, K.4    Silverman, L.5    Döhner, K.6    Armstrong, S.7
  • 58
    • 0037028488 scopus 로고    scopus 로고
    • MLL3, a new human member of the TRX/MLL gene family, maps to 7q36, a chromosome region frequently deleted in myeloid leukaemia
    • Ruault, M., Brun, M.E., Ventura, M., Roizes, G. and De Sario, A. (2002) MLL3, a new human member of the TRX/MLL gene family, maps to 7q36, a chromosome region frequently deleted in myeloid leukaemia. Gene, 284, 73-81.
    • (2002) Gene , vol.284 , pp. 73-81
    • Ruault, M.1    Brun, M.E.2    Ventura, M.3    Roizes, G.4    De Sario, A.5
  • 59
    • 66649120472 scopus 로고    scopus 로고
    • A tumor suppressive coactivator complex of p53 containing ASC-2 and histone H3-lysine-4 methyltransferase MLL3 or its paralogue MLL4
    • Lee, J., Kim, D.H., Lee, S., Yang, Q.H., Lee, D.K., Lee, S.K., Roeder, R.G. and Lee, J.W. (2009) A tumor suppressive coactivator complex of p53 containing ASC-2 and histone H3-lysine-4 methyltransferase MLL3 or its paralogue MLL4. Proce. Natl. Acad. Sci. U.S.A., 106, 8513-8518.
    • (2009) Proce. Natl. Acad. Sci. U.S.A. , vol.106 , pp. 8513-8518
    • Lee, J.1    Kim, D.H.2    Lee, S.3    Yang, Q.H.4    Lee, D.K.5    Lee, S.K.6    Roeder, R.G.7    Lee, J.W.8
  • 61
    • 84876433321 scopus 로고    scopus 로고
    • Drosophila SETs its sights on cancer: Trr/MLL3/4 COMPASS-like complexes in development and disease
    • Morgan, M.A. and Shilatifard, A. (2013) Drosophila SETs its sights on cancer: Trr/MLL3/4 COMPASS-like complexes in development and disease. Mol. Cell. Biol., 33, 1698-1701.
    • (2013) Mol. Cell. Biol. , vol.33 , pp. 1698-1701
    • Morgan, M.A.1    Shilatifard, A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.