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Volumn 5, Issue , 2015, Pages

Massive expansion and functional divergence of innate immune genes in a protostome

Author keywords

[No Author keywords available]

Indexed keywords

TOLL LIKE RECEPTOR; TRANSCRIPTOME;

EID: 84930010431     PISSN: None     EISSN: 20452322     Source Type: Journal    
DOI: 10.1038/srep08693     Document Type: Article
Times cited : (260)

References (63)
  • 1
    • 32944477673 scopus 로고    scopus 로고
    • The evolution of adaptive immunity
    • Pancer, Z. & Cooper, M. D. The evolution of adaptive immunity. Annu Rev Immunol 24, 497-518 (2006).
    • (2006) Annu Rev Immunol , vol.24 , pp. 497-518
    • Pancer, Z.1    Cooper, M.D.2
  • 2
    • 72849115174 scopus 로고    scopus 로고
    • Origin and evolution of the adaptive immune system: Genetic events and selective pressures
    • Flajnik, M. F. & Kasahara, M. Origin and evolution of the adaptive immune system: genetic events and selective pressures. Nat Rev Genet 11, 47-59 (2009).
    • (2009) Nat Rev Genet , vol.11 , pp. 47-59
    • Flajnik, M.F.1    Kasahara, M.2
  • 3
    • 32944464648 scopus 로고    scopus 로고
    • Pathogen recognition and innate immunity
    • Akira, S., Uematsu, S. & Takeuchi, O. Pathogen recognition and innate immunity. Cell 124, 783-801 (2006).
    • (2006) Cell , vol.124 , pp. 783-801
    • Akira, S.1    Uematsu, S.2    Takeuchi, O.3
  • 4
    • 3142724031 scopus 로고    scopus 로고
    • Toll-like receptor signalling
    • Akira, S. & Takeda, K. Toll-like receptor signalling. Nat Rev Immunol 4, 499-511 (2004).
    • (2004) Nat Rev Immunol , vol.4 , pp. 499-511
    • Akira, S.1    Takeda, K.2
  • 5
    • 0034625260 scopus 로고    scopus 로고
    • Drosophila Dscam is an Axon Guidance Receptor Exhibiting Extraordinary Molecular Diversity
    • Schmucker, D. et al. Drosophila Dscam Is an Axon Guidance Receptor Exhibiting Extraordinary Molecular Diversity. Cell 101, 671-684 (2000).
    • (2000) Cell , vol.101 , pp. 671-684
    • Schmucker, D.1
  • 6
    • 3042802389 scopus 로고    scopus 로고
    • Diversification of Ig superfamily genes in an invertebrate
    • Zhang, S. M., Adema, C. M., Kepler, T. B. & Loker, E. S. Diversification of Ig superfamily genes in an invertebrate. Science 305, 251-254 (2004).
    • (2004) Science , vol.305 , pp. 251-254
    • Zhang, S.M.1    Adema, C.M.2    Kepler, T.B.3    Loker, E.S.4
  • 7
    • 0036915521 scopus 로고    scopus 로고
    • Identification of diversified genes that contain immunoglobulin-like variable regions in a protochordate
    • Cannon, J. P., Haire, R. N. & Litman, G.W. Identification of diversified genes that contain immunoglobulin-like variable regions in a protochordate. Nat Immunol 3, 1200-1207 (2002).
    • (2002) Nat Immunol , vol.3 , pp. 1200-1207
    • Cannon, J.P.1    Haire, R.N.2    Litman, G.W.3
  • 8
    • 33750980112 scopus 로고    scopus 로고
    • Genomic insights into the immune system of the sea urchin
    • Rast, J. P., Smith, L. C., Loza-Coll, M., Hibino, T. & Litman, G. W. Genomic insights into the immune system of the sea urchin. Science 314, 952-956 (2006).
    • (2006) Science , vol.314 , pp. 952-956
    • Rast, J.P.1    Smith, L.C.2    Loza-Coll, M.3    Hibino, T.4    Litman, G.W.5
  • 9
    • 46449138598 scopus 로고    scopus 로고
    • Genomic analysis of the immune gene repertoire of amphioxus reveals extraordinary innate complexity and diversity
    • Huang, S. et al. Genomic analysis of the immune gene repertoire of amphioxus reveals extraordinary innate complexity and diversity. Genome Res 18, 1112-1126 (2008).
    • (2008) Genome Res , vol.18 , pp. 1112-1126
    • Huang, S.1
  • 10
    • 0036167107 scopus 로고    scopus 로고
    • Drosophila innate immunity: An evolutionary perspective
    • Hoffmann, J. A. & Reichhart, J.-M. Drosophila innate immunity: an evolutionary perspective. Nat Immunol 3, 121-126 (2002).
    • (2002) Nat Immunol , vol.3 , pp. 121-126
    • Hoffmann, J.A.1    Reichhart, J.-M.2
  • 11
    • 0034955671 scopus 로고    scopus 로고
    • Social stress in laboratory rats: Behavior, immune function, and tumor metastasis
    • Stefanski, V. Social stress in laboratory rats: behavior, immune function, and tumor metastasis. Physiol Behav 73, 385-391 (2001).
    • (2001) Physiol Behav , vol.73 , pp. 385-391
    • Stefanski, V.1
  • 12
    • 68949125076 scopus 로고    scopus 로고
    • Nutritional stress affects the tsetse fly's immune gene expression
    • Akoda, K. et al. Nutritional stress affects the tsetse fly's immune gene expression. Med Vet Entomol 23, 195-201 (2009).
    • (2009) Med Vet Entomol , vol.23 , pp. 195-201
    • Akoda, K.1
  • 13
    • 84862788378 scopus 로고    scopus 로고
    • Temperature stress affects the expression of immune response genes in the alfalfa leafcutting bee, Megachile rotundata
    • Xu, J.&James, R. R. Temperature stress affects the expression of immune response genes in the alfalfa leafcutting bee, Megachile rotundata. Insect Mol Biol 21, 269-280 (2012).
    • (2012) Insect Mol Biol , vol.21 , pp. 269-280
    • Xu, J.1    James, R.R.2
  • 14
    • 84867088834 scopus 로고    scopus 로고
    • The oyster genome reveals stress adaptation and complexity of shell formation
    • Zhang, G. et al. The oyster genome reveals stress adaptation and complexity of shell formation. Nature 490, 49-54 (2012).
    • (2012) Nature , vol.490 , pp. 49-54
    • Zhang, G.1
  • 15
    • 84858009742 scopus 로고    scopus 로고
    • Specific versus non-specific immune responses in an invertebrate species evidenced by a comparative de novo sequencing study
    • Deleury, E. et al. Specific versus non-specific immune responses in an invertebrate species evidenced by a comparative de novo sequencing study. PLoS One 7, e32512 (2012).
    • (2012) PLoS One , vol.7
    • Deleury, E.1
  • 16
    • 0027250364 scopus 로고
    • Recognition DNA sequences of interferon regulatory factor 1 (IRF-1) and IRF-2, regulators of cell growth and the interferon system
    • Tanaka, N., Kawakami, T. & Taniguchi, T. Recognition DNA sequences of interferon regulatory factor 1 (IRF-1) and IRF-2, regulators of cell growth and the interferon system. Mol Cell Biol 13, 4531-4538 (1993).
    • (1993) Mol Cell Biol , vol.13 , pp. 4531-4538
    • Tanaka, N.1    Kawakami, T.2    Taniguchi, T.3
  • 17
    • 0032133278 scopus 로고    scopus 로고
    • My D88 is an adaptor protein in the hToll/IL-1 receptor family signaling pathways
    • Medzhitov, R. et al.MyD88 is an adaptor protein in the hToll/IL-1 receptor family signaling pathways. Mol Cell 2, 253-258 (1998).
    • (1998) Mol Cell , vol.2 , pp. 253-258
    • Medzhitov, R.1
  • 18
    • 34247566510 scopus 로고    scopus 로고
    • The family of five: TIR-domain-containing adaptors in Toll-like receptor signalling
    • O'Neill, L. A. J. & Bowie, A. G. The family of five: TIR-domain-containing adaptors in Toll-like receptor signalling. Nature Reviews Immunology 7, 353-364 (2007).
    • (2007) Nature Reviews Immunology , vol.7 , pp. 353-364
    • O'neill, L.A.J.1    Bowie, A.G.2
  • 19
    • 3242813113 scopus 로고    scopus 로고
    • The RNA helicase RIG-I has an essential function in doublestranded RNA-induced innate antiviral responses
    • Yoneyama, M. et al. The RNA helicase RIG-I has an essential function in doublestranded RNA-induced innate antiviral responses. Nat Immunol 5, 730-737, doi:10.1038/ni1087 (2004).
    • (2004) Nat Immunol , vol.5 , pp. 730-737
    • Yoneyama, M.1
  • 20
    • 0035936797 scopus 로고    scopus 로고
    • The TNF and TNF receptor superfamilies: Integrating mammalian biology
    • Locksley, R. M., Killeen, N. & Lenardo, M. J. The TNF and TNF receptor superfamilies: integrating mammalian biology. Cell 104, 487 (2001).
    • (2001) Cell , vol.104 , pp. 487
    • Locksley, R.M.1    Killeen, N.2    Lenardo, M.J.3
  • 21
    • 79959630000 scopus 로고    scopus 로고
    • Expanding TRAF function: TRAF3 as a trifaced immune regulator
    • Häcker, H., Tseng, P. H. & Karin, M. Expanding TRAF function: TRAF3 as a trifaced immune regulator. Nat Rev Immunol 11, 457-468 (2011).
    • (2011) Nat Rev Immunol , vol.11 , pp. 457-468
    • Häcker, H.1    Tseng, P.H.2    Karin, M.3
  • 22
    • 0035139914 scopus 로고    scopus 로고
    • Evolution of the complement system
    • Nonaka, M. Evolution of the complement system. Curr Opin Immunol 13, 69-73 (2001).
    • (2001) Curr Opin Immunol , vol.13 , pp. 69-73
    • Nonaka, M.1
  • 23
    • 77952882630 scopus 로고    scopus 로고
    • TheC1q domain containing proteins: Where do they come from and what do they do?
    • Carland, T. M.&Gerwick, L. TheC1q domain containing proteins: Where do they come from and what do they do? Dev Comp Immunol 34, 785-790 (2010).
    • (2010) Dev Comp Immunol , vol.34 , pp. 785-790
    • Carland, T.M.1    Gerwick, L.2
  • 24
    • 84912059102 scopus 로고    scopus 로고
    • The genome of the Pacific oyster Crassostrea gigas brings new insights on the massive expansion of the C1q gene family in Bivalvia
    • Gerdol, M., Venier, P. & Pallavicini, A. The genome of the Pacific oyster Crassostrea gigas brings new insights on the massive expansion of the C1q gene family in Bivalvia. Developmental & Comparative Immunology 49, 59-71 (2014).
    • (2014) Developmental & Comparative Immunology , vol.49 , pp. 59-71
    • Gerdol, M.1    Venier, P.2    Pallavicini, A.3
  • 25
    • 78650510022 scopus 로고    scopus 로고
    • The primary role of fibrinogen-related proteins in invertebrates is defense, not coagulation
    • Hanington, P.C.&Zhang, S. M. The primary role of fibrinogen-related proteins in invertebrates is defense, not coagulation. J Innate Immun 3, 17-27 (2011).
    • (2011) J Innate Immun , vol.3 , pp. 17-27
    • Hanington, P.C.1    Zhang, S.M.2
  • 26
    • 0742324860 scopus 로고    scopus 로고
    • TLR signaling pathways
    • Takeda, K. & Akira, S. TLR signaling pathways. Semin Immunol 16, 3-9 (2004).
    • (2004) Semin Immunol , vol.16 , pp. 3-9
    • Takeda, K.1    Akira, S.2
  • 27
    • 0037066464 scopus 로고    scopus 로고
    • Requirement for a peptidoglycan recognition protein (PGRP) in Relish activation and antibacterial immune responses in Drosophila
    • Choe, K.-M., Werner, T., Stöven, S., Hultmark,D.&Anderson, K.V. Requirement for a peptidoglycan recognition protein (PGRP) in Relish activation and antibacterial immune responses in Drosophila. Science 296, 359-362 (2002).
    • (2002) Science , vol.296 , pp. 359-362
    • Choe, K.-M.1    Werner, T.2    Stöven, S.3    Hultmark, D.4    Anderson, K.V.5
  • 28
    • 0019518404 scopus 로고
    • Role of oxygen metabolites in immune complex injury of lung
    • Johnson, K. J.&Ward, P. Role of oxygen metabolites in immune complex injury of lung. The Journal of Immunology 126, 2365-2369 (1981).
    • (1981) The Journal of Immunology , vol.126 , pp. 2365-2369
    • Johnson, K.J.1    Ward, P.2
  • 29
    • 0026705772 scopus 로고
    • The catalase - peroxidase gene and isoniazid resistance of Mycobacterium tuberculosis
    • Zhang, Y., Heym, B., Allen, B., Young, D.&Cole, S. The catalase - peroxidase gene and isoniazid resistance of Mycobacterium tuberculosis. Nature 358, 591-593 (1992).
    • (1992) Nature , vol.358 , pp. 591-593
    • Zhang, Y.1    Heym, B.2    Allen, B.3    Young, D.4    Cole, S.5
  • 30
    • 0141799911 scopus 로고    scopus 로고
    • Defensins: Antimicrobial peptides of innate immunity
    • Ganz, T. Defensins: antimicrobial peptides of innate immunity. Nature Reviews Immunology 3, 710-720 (2003).
    • (2003) Nature Reviews Immunology , vol.3 , pp. 710-720
    • Ganz, T.1
  • 31
    • 34548670476 scopus 로고    scopus 로고
    • Structure of C8a-MACPF reveals mechanism of membrane attack in complement immune defense
    • Hadders, M. A., Beringer, D. X. & Gros, P. Structure of C8a-MACPF reveals mechanism of membrane attack in complement immune defense. Science 317, 1552-1554 (2007).
    • (2007) Science , vol.317 , pp. 1552-1554
    • Hadders, M.A.1    Beringer, D.X.2    Gros, P.3
  • 32
    • 84876358616 scopus 로고    scopus 로고
    • Toll-like receptors and MyD88 adaptors in Mytilus: Complete cds and gene expression levels
    • Toubiana, M. et al. Toll-like receptors and MyD88 adaptors in Mytilus: Complete cds and gene expression levels. Developmental & Comparative Immunology 40, 158-166 (2013).
    • (2013) Developmental & Comparative Immunology , vol.40 , pp. 158-166
    • Toubiana, M.1
  • 33
    • 79951846199 scopus 로고    scopus 로고
    • The evolution and regulation of the mucosal immune complexity in the basal chordate amphioxus
    • Huang, S. et al. The evolution and regulation of the mucosal immune complexity in the basal chordate amphioxus. J Immunol 186, 2042-2055 (2011).
    • (2011) J Immunol , vol.186 , pp. 2042-2055
    • Huang, S.1
  • 34
    • 36549088118 scopus 로고    scopus 로고
    • Dynamic evolution of the innate immune system in Drosophila
    • Sackton, T. B. et al. Dynamic evolution of the innate immune system in Drosophila. Nat Genet 39, 1461-1468 (2007).
    • (2007) Nat Genet , vol.39 , pp. 1461-1468
    • Sackton, T.B.1
  • 35
    • 34250860637 scopus 로고    scopus 로고
    • Evolutionary dynamics of immune-related genes and pathways in disease-vector mosquitoes
    • Waterhouse, R. M. et al. Evolutionary dynamics of immune-related genes and pathways in disease-vector mosquitoes. Science Signaling 316, 1738 (2007).
    • (2007) Science Signaling , vol.316 , pp. 1738
    • Waterhouse, R.M.1
  • 36
    • 77949273867 scopus 로고    scopus 로고
    • Highly diversified innate receptor systems and new forms of animal immunity
    • Messier-Solek, C., Buckley, K. M. & Rast, J. P. Highly diversified innate receptor systems and new forms of animal immunity. Semin Immunol 22, 39-47 (2010).
    • (2010) Semin Immunol , vol.22 , pp. 39-47
    • Messier-Solek, C.1    Buckley, K.M.2    Rast, J.P.3
  • 37
    • 33751549306 scopus 로고    scopus 로고
    • The immune gene repertoire encoded in the purple sea urchin genome
    • Hibino, T. et al. The immune gene repertoire encoded in the purple sea urchin genome. Dev Biol 300, 349-365 (2006).
    • (2006) Dev Biol , vol.300 , pp. 349-365
    • Hibino, T.1
  • 38
    • 0030595339 scopus 로고    scopus 로고
    • The Dorsoventral Regulatory Gene Cassette spätzle/Toll/cactus Controls the Potent Antifungal Response in Drosophila Adults
    • Lemaitre, B., Nicolas, E., Michaut, L., Reichhart, J.-M. & Hoffmann, J. A. The Dorsoventral Regulatory Gene Cassette spätzle/Toll/cactus Controls the Potent Antifungal Response in Drosophila Adults. Cell 86, 973-983 (1996).
    • (1996) Cell , vol.86 , pp. 973-983
    • Lemaitre, B.1    Nicolas, E.2    Michaut, L.3    Reichhart, J.-M.4    Hoffmann, J.A.5
  • 39
    • 78650141540 scopus 로고    scopus 로고
    • A phylogenetically based transcriptome age index mirrors ontogenetic divergence patterns
    • Domazet-Loso, T. & Tautz, D. A phylogenetically based transcriptome age index mirrors ontogenetic divergence patterns. Nature 468, 815-818 (2010).
    • (2010) Nature , vol.468 , pp. 815-818
    • Domazet-Loso, T.1    Tautz, D.2
  • 40
    • 75549087305 scopus 로고    scopus 로고
    • The evolution of gene duplications: Classifying and distinguishing between models
    • Innan, H. & Kondrashov, F. The evolution of gene duplications: classifying and distinguishing between models. Nat Rev Genet 11, 97-108 (2010).
    • (2010) Nat Rev Genet , vol.11 , pp. 97-108
    • Innan, H.1    Kondrashov, F.2
  • 41
    • 27944477670 scopus 로고    scopus 로고
    • Concerted and birth-and-death evolution of multigene families
    • Nei, M. & Rooney, A. P. Concerted and birth-and-death evolution of multigene families. Annu Rev Genet 39, 121 (2005).
    • (2005) Annu Rev Genet , vol.39 , pp. 121
    • Nei, M.1    Rooney, A.P.2
  • 42
    • 57749085421 scopus 로고    scopus 로고
    • Importance of lineage-specific expansion of plant tandem duplicates in the adaptive response to environmental stimuli
    • Hanada, K., Zou, C., Lehti-Shiu, M. D., Shinozaki, K. & Shiu, S. H. Importance of lineage-specific expansion of plant tandem duplicates in the adaptive response to environmental stimuli. Plant Physiol 148, 993-1003 (2008).
    • (2008) Plant Physiol , vol.148 , pp. 993-1003
    • Hanada, K.1    Zou, C.2    Lehti-Shiu, M.D.3    Shinozaki, K.4    Shiu, S.H.5
  • 43
    • 0030791307 scopus 로고    scopus 로고
    • Evolution by the birth-and-death process in multigene families of the vertebrate immune system
    • Nei, M., Gu, X. & Sitnikova, T. Evolution by the birth-and-death process in multigene families of the vertebrate immune system. Proceedings of the National Academy of Sciences 94, 7799 (1997).
    • (1997) Proceedings of the National Academy of Sciences , vol.94 , pp. 7799
    • Nei, M.1    Gu, X.2    Sitnikova, T.3
  • 44
    • 78650424339 scopus 로고    scopus 로고
    • Role for a somatically diversified lectin in resistance of an invertebrate to parasite infection
    • Hanington, P. C. et al. Role for a somatically diversified lectin in resistance of an invertebrate to parasite infection. Proceedings of the National Academy of Sciences 107, 21087-21092 (2010).
    • (2010) Proceedings of the National Academy of Sciences , vol.107 , pp. 21087-21092
    • Hanington, P.C.1
  • 45
    • 22144452520 scopus 로고    scopus 로고
    • The evolution of vertebrate Toll-like receptors
    • Roach, J. C. et al. The evolution of vertebrate Toll-like receptors. P Natl Acad Sci USA 102, 9577-9582 (2005).
    • (2005) P Natl Acad Sci USA , vol.102 , pp. 9577-9582
    • Roach, J.C.1
  • 46
    • 70350464185 scopus 로고    scopus 로고
    • Toll-like Receptors of the Ascidian Ciona intestinalis: Prototypes with hybrid functionalities of vertebrate Toll-like receptors
    • Sasaki, N., Ogasawara, M., Sekiguchi, T., Kusumoto, S. & Satake, H. Toll-like Receptors of the Ascidian Ciona intestinalis: prototypes with hybrid functionalities of vertebrate Toll-like receptors. J Biol Chem 284, 27336-27343 (2009).
    • (2009) J Biol Chem , vol.284 , pp. 27336-27343
    • Sasaki, N.1    Ogasawara, M.2    Sekiguchi, T.3    Kusumoto, S.4    Satake, H.5
  • 47
    • 18944374801 scopus 로고    scopus 로고
    • Loss of ancestral genes in the genomic evolution of Ciona intestinalis
    • Hughes, A. L. & Friedman, R. Loss of ancestral genes in the genomic evolution of Ciona intestinalis. Evol Dev 7, 196-200 (2005).
    • (2005) Evol Dev , vol.7 , pp. 196-200
    • Hughes, A.L.1    Friedman, R.2
  • 48
    • 56549119570 scopus 로고    scopus 로고
    • Turning a hobby into a job: How duplicated genes find new functions
    • Conant, G. C. & Wolfe, K. H. Turning a hobby into a job: how duplicated genes find new functions. Nat Rev Genet 9, 938-950 (2008).
    • (2008) Nat Rev Genet , vol.9 , pp. 938-950
    • Conant, G.C.1    Wolfe, K.H.2
  • 49
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with Burrows-Wheeler transform
    • Li,H.&Durbin, R. Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25, 1754-1760 (2009).
    • (2009) Bioinformatics , vol.25 , pp. 1754-1760
    • Li, H.1    Durbin, R.2
  • 50
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • Edgar, R. C. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32, 1792-1797 (2004).
    • (2004) Nucleic Acids Res , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 51
    • 67650757433 scopus 로고    scopus 로고
    • TrimAl: A tool for automated alignment trimming in large-scale phylogenetic analyses
    • Capella-Gutiérrez, S., Silla-Martínez, J. M. & Gabaldón, T. trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses. Bioinformatics 25, 1972-1973 (2009).
    • (2009) Bioinformatics , vol.25 , pp. 1972-1973
    • Capella-Gutiérrez, S.1    Silla-Martínez, J.M.2    Gabaldón, T.3
  • 52
    • 18744382506 scopus 로고    scopus 로고
    • ProtTest: Selection of best-fit models of protein evolution
    • Abascal, F., Zardoya, R. & Posada, D. ProtTest: selection of best-fit models of protein evolution. Bioinformatics 21, 2104-2105 (2005).
    • (2005) Bioinformatics , vol.21 , pp. 2104-2105
    • Abascal, F.1    Zardoya, R.2    Posada, D.3
  • 53
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0
    • Tamura, K., Dudley, J., Nei, M. & Kumar, S. MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24, 1596-1599 (2007).
    • (2007) Mol Biol Evol , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 54
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
    • Guindon, S. & Gascuel, O. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52, 696-704 (2003).
    • (2003) Syst Biol , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 55
    • 34547803197 scopus 로고    scopus 로고
    • PAML 4: Phylogenetic analysis by maximum likelihood
    • Yang, Z.PAML 4: phylogenetic analysis by maximum likelihood. Mol Biol Evol 24, 1586-1591 (2007).
    • (2007) Mol Biol Evol , vol.24 , pp. 1586-1591
    • Yang, Z.1
  • 56
    • 79551646855 scopus 로고    scopus 로고
    • A Crassostrea gigas Toll-like receptor and comparative analysis of TLR pathway in invertebrates
    • Zhang, L., Li, L. & Zhang, G. A Crassostrea gigas Toll-like receptor and comparative analysis of TLR pathway in invertebrates. Fish Shellfish Immunol 30, 653-660 (2011).
    • (2011) Fish Shellfish Immunol , vol.30 , pp. 653-660
    • Zhang, L.1    Li, L.2    Zhang, G.3
  • 57
    • 0033869614 scopus 로고    scopus 로고
    • Development of a PCR procedure for the detection of a herpes-like virus infecting oysters in France
    • Renault, T., Le Deuff, R.-M., Lipart, C. & Delsert, C. Development of a PCR procedure for the detection of a herpes-like virus infecting oysters in France. J Virol Methods 88, 41-50 (2000).
    • (2000) J Virol Methods , vol.88 , pp. 41-50
    • Renault, T.1    Le Deuff, R.-M.2    Lipart, C.3    Delsert, C.4
  • 58
    • 84880695105 scopus 로고    scopus 로고
    • Validation of housekeeping genes as internal controls for studying gene expression during Pacific oyster (Crassostrea gigas) development by quantitative real-time PCR
    • Du, Y. et al. Validation of housekeeping genes as internal controls for studying gene expression during Pacific oyster (Crassostrea gigas) development by quantitative real-time PCR. Fish & Shellfish Immunology 34, 939-945 (2013).
    • (2013) Fish & Shellfish Immunology , vol.34 , pp. 939-945
    • Du, Y.1
  • 59
    • 65449136284 scopus 로고    scopus 로고
    • TopHat: Discovering splice junctionswith RNA-Seq
    • Trapnell, C., Pachter, L.&Salzberg, S. L. TopHat: discovering splice junctionswith RNA-Seq. Bioinformatics 25, 1105-1111 (2009).
    • (2009) Bioinformatics , vol.25 , pp. 1105-1111
    • Trapnell, C.1    Pachter, L.2    Salzberg, S.L.3
  • 60
    • 77953176036 scopus 로고    scopus 로고
    • A scaling normalization method for differential expression analysis of RNA-seq data
    • Robinson, M. D. & Oshlack, A. A scaling normalization method for differential expression analysis of RNA-seq data. Genome Biol 11, R25 (2010).
    • (2010) Genome Biol , vol.11 , pp. R25
    • Robinson, M.D.1    Oshlack, A.2
  • 61
    • 78651249577 scopus 로고    scopus 로고
    • De novo analysis of transcriptome dynamics in themigratory locust during the development of phase traits
    • Chen, S. et al. De novo analysis of transcriptome dynamics in themigratory locust during the development of phase traits. PLoS One 5, e15633 (2010).
    • (2010) PLoS One , vol.5
    • Chen, S.1
  • 62
    • 33751381461 scopus 로고    scopus 로고
    • TimeTree: A public knowledge-base of divergence times among organisms
    • Hedges, S. B., Dudley, J. & Kumar, S. TimeTree: a public knowledge-base of divergence times among organisms. Bioinformatics 22, 2971-2972 (2006).
    • (2006) Bioinformatics , vol.22 , pp. 2971-2972
    • Hedges, S.B.1    Dudley, J.2    Kumar, S.3
  • 63
    • 84872893458 scopus 로고    scopus 로고
    • Insights into bilaterian evolution from three spiralian genomes
    • Simakov, O. et al. Insights into bilaterian evolution from three spiralian genomes. Nature 493, 526-531 (2012).
    • (2012) Nature , vol.493 , pp. 526-531
    • Simakov, O.1


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