The evolution and regulation of the mucosal immune complexity in the basal chordate amphioxus

Journal of Immunology

Volumn 186, Issue 4, 2011, Pages 2042-2055

  Huang, Shengfeng ^a   Wang, Xin ^a   Yan, Qingyu ^a   Guo, Lei ^a   Yuan, Shaochun ^a   Huang, Guangrui ^a   Huang, Huiqing ^a   Li, Jun ^a   Dong, Meiling ^a   Chen, Shangwu ^a   Xu, Anlong ^a  

^a SUN YAT SEN UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

BINDING PROTEIN; CHITIN BINDING PROTEIN; GRAM NEGATIVE BINDING PROTEIN; INTERLEUKIN 1 RECEPTOR; MESSENGER RNA; PEPTIDOGLYCAN RECOGNITION PROTEIN; TOLL LIKE RECEPTOR; TRANSCRIPTOME; TUMOR NECROSIS FACTOR; UNCLASSIFIED DRUG;

APOPTOSIS; ARTICLE; BACTERIAL INFECTION; BRANCHIOSTOMA; BRANCHIOSTOMA BELCHERI; COMPLEMENT SYSTEM; CONTROLLED STUDY; ESCHERICHIA COLI; EVOLUTION; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENE MAPPING; GENETIC ANALYSIS; IMMUNOMODULATION; INNATE IMMUNITY; INVERTEBRATE; MUCOSAL IMMUNITY; NONHUMAN; PHYLOGENY; PRIORITY JOURNAL; QUANTITATIVE ANALYSIS; REAL TIME POLYMERASE CHAIN REACTION; RESPIRATORY BURST; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA SEQUENCE; SIGNAL TRANSDUCTION; STAPHYLOCOCCUS AUREUS; VIBRIO VULNIFICUS;

ANIMALS; CARRIER PROTEINS; CHORDATA, NONVERTEBRATE; DROSOPHILA PROTEINS; ESCHERICHIA COLI INFECTIONS; EVOLUTION, MOLECULAR; EXPRESSED SEQUENCE TAGS; GENE EXPRESSION PROFILING; HUMANS; IMMUNITY, INNATE; IMMUNITY, MUCOSAL; INTESTINAL DISEASES; MULTIGENE FAMILY; STAPHYLOCOCCAL INFECTIONS; VIBRIO INFECTIONS;

EID: 79951846199     PISSN: 00221767     EISSN: 15506606     Source Type: Journal    
DOI: 10.4049/jimmunol.1001824     Document Type: Article

References (53)

1. Pancer, Z., and M. D. Cooper. 2006. The evolution of adaptive immunity. Annu. Rev. Immunol. 24: 497-518.
2. Flajnik, M. F., and M. Kasahara. 2010. Origin and evolution of the adaptive immune system: genetic events and selective pressures. Nat. Rev. Genet. 11: 47-59.
3. Akira, S., S. Uematsu, and O. Takeuchi. 2006. Pathogen recognition and innate immunity. Cell 124: 783-801. (Pubitemid 43261452)
4. Cooper, M. D., and M. N. Alder. 2006. The evolution of adaptive immune systems. Cell 124: 815-822.
5. Slack, E., S. Hapfelmeier, B. Stecher, Y. Velykoredko, M. Stoel, M. A. Lawson, M. B. Geuking, B. Beutler, T. F. Tedder, W. D. Hardt, et al. 2009. Innate and adaptive immunity cooperate flexibly to maintain host-microbiota mutualism. Science 325: 617-620.
6. Iwasaki, A., and R. Medzhitov. 2010. Regulation of adaptive immunity by the innate immune system. Science 327: 291-295.
7. Hoebe, K., E. Janssen, and B. Beutler. 2004. The interface between innate and adaptive immunity. Nat. Immunol. 5: 971-974.
8. Carroll, M. C. 2004. The complement system in regulation of adaptive immunity. Nat. Immunol. 5: 981-986.
9. Lemaitre, B., and J. Hoffmann. 2007. The host defense of Drosophila melanogaster. Annu. Rev. Immunol. 25: 697-743.
10. Huang, S., S. Yuan, L. Guo, Y. Yu, J. Li, T. Wu, T. Liu, M. Yang, K. Wu, H. Liu, et al. 2008. Genomic analysis of the immune gene repertoire of amphioxus reveals extraordinary innate complexity and diversity. Genome Res. 18: 1112-1126. (Pubitemid 351931162)
11. Hibino, T., M. Loza-Coll, C. Messier, A. J. Majeske, A. H. Cohen, D. P. Terwilliger, K. M. Buckley, V. Brockton, S. V. Nair, K. Berney, et al. 2006. The immune gene repertoire encoded in the purple sea urchin genome. Dev. Biol. 300: 349-365.
12. Rast, J. P., L. C. Smith, M. Loza-Coll, T. Hibino, and G. W. Litman. 2006. Genomic insights into the immune system of the sea urchin. Science 314: 952-956.
13. Rast, J. P., and C. Messier-Solek. 2008. Marine invertebrate genome sequences and our evolving understanding of animal immunity. Biol. Bull. 214: 274-283.
14. Yuan, S., Y. Yu, S. Huang, T. Liu, T. Wu, M. Dong, S. Chen, Y. Yu, and A. Xu. 2007. Bbt-TNFR1 and Bbt-TNFR2, two tumor necrosis factor receptors from Chinese amphioxus involve in host defense. Mol. Immunol. 44: 756-762.
15. Yu, Y., Y. Yu, H. Huang, K. Feng, M. Pan, S. Yuan, S. Huang, T. Wu, L. Guo, M. Dong, et al. 2007. A short-form C-type lectin from amphioxus acts as a direct microbial killing protein via interaction with peptidoglycan and glucan. J. Immunol. 179: 8425-8434.
16. Margulies, M., M. Egholm, W. E. Altman, S. Attiya, J. S. Bader, L. A. Bemben, J. Berka, M. S. Braverman, Y. J. Chen, Z. Chen, et al. 2005. Genome sequencing in microfabricated high-density picolitre reactors. Nature 437: 376-380. (Pubitemid 41613494)
17. Romualdi, C., S. Bortoluzzi, F. D'Alessi, and G. A. Danieli. 2003. IDEG6: a web tool for detection of differentially expressed genes in multiple tag sampling experiments. Physiol. Genomics 12: 159-162.
18. Putnam, N. H., T. Butts, D. E. Ferrier, R. F. Furlong, U. Hellsten, T. Kawashima, M. Robinson-Rechavi, E. Shoguchi, A. Terry, J. K. Yu, et al. 2008. The amphioxus genome and the evolution of the chordate karyotype. Nature 453: 1064-1071. (Pubitemid 351888243)
19. Roach, J. C., K. D. Smith, K. L. Strobe, S. M. Nissen, C. D. Haudenschild, D. Zhou, T. J. Vasicek, G. A. Held, G. A. Stolovitzky, L. E. Hood, and A. Aderem. 2007. Transcription factor expression in lipopolysaccharide- activated peripheral-blood-derived mononuclear cells. Proc. Natl. Acad. Sci. USA 104: 16245-16250.
20. De Gregorio, E., P. T. Spellman, G. M. Rubin, and B. Lemaitre. 2001. Genomewide analysis of the Drosophila immune response by using oligonucleotide microarrays. Proc. Natl. Acad. Sci. USA 98: 12590-12595.
21. Irving, P., L. Troxler, T. S. Heuer, M. Belvin, C. Kopczynski, J. M. Reichhart, J. A. Hoffmann, and C. Hetru. 2001. A genome-wide analysis of immune responses in Drosophila. Proc. Natl. Acad. Sci. USA 98: 15119-15124.
22. Gilad, Y., and D. Lancet. 2003. Population differences in the human functional olfactory repertoire. Mol. Biol. Evol. 20: 307-314.
23. Inohara, N., and G. Nuñez. 2003. NODs: intracellular proteins involved in inflammation and apoptosis. Nat. Rev. Immunol. 3: 371-382.
24. Ting, J. P., J. A. Duncan, and Y. Lei. 2010. How the noninflammasome NLRs function in the innate immune system. Science 327: 286-290.
25. Boutros, M., H. Agaisse, and N. Perrimon. 2002. Sequential activation of signaling pathways during innate immune responses in Drosophila. Dev. Cell 3: 711-722. (Pubitemid 35339488)
26. Messier-Solek, C., K. M. Buckley, and J. P. Rast. 2010. Highly diversified innate receptor systems and new forms of animal immunity. Semin. Immunol. 22: 39-47.
27. Yuan, S., T. Liu, S. Huang, T. Wu, L. Huang, H. Liu, X. Tao, M. Yang, K. Wu, Y. Yu, et al. 2009. Genomic and functional uniqueness of the TNF receptor-associated factor gene family in amphioxus, the basal chordate. J. Immunol. 183: 4560-4568.
28. Yuan, S., S. Huang, W. Zhang, T. Wu, M. Dong, Y. Yu, T. Liu, K. Wu, H. Liu, M. Yang, et al. 2009. An amphioxus TLR with dynamic embryonic expression pattern responses to pathogens and activates NF-κB pathway via MyD88. Mol. Immunol. 46: 2348-2356.
29. Yuan, S., H. Liu, M. Gu, L. Xu, S. Huang, Z. Ren, and A. Xu. 2010. Characterization of the extrinsic apoptotic pathway in the basal chordate amphioxus. Sci. Signal. 3: ra66.
30. Yuan, S., K. Wu, M. Yang, L. Xu, L. Huang, H. Liu, X. Tao, S. Huang, and A. Xu. 2010. Amphioxus SARM involved in neural development may function as a suppressor of TLR signaling. J. Immunol. 184: 6874-6881.
31. Sarrias, M. R., J. Grønlund, O. Padilla, J. Madsen, U. Holmskov, and F. Lozano. 2004. The scavenger receptor cysteine-rich (SRCR) domain: an ancient and highly conserved protein module of the innate immune system. Crit. Rev. Immunol. 24: 1-37.
32. Bowdish, D. M., and S. Gordon. 2009. Conserved domains of the class A scavenger receptors: evolution and function. Immunol. Rev. 227: 19-31.
33. Fan, C., S. Zhang, L. Li, and Y. Chao. 2008. Fibrinogen-related protein from amphioxus Branchiostoma belcheri is a multivalent pattern recognition receptor with a bacteriolytic activity. Mol. Immunol. 45: 3338-3346.
34. Yu, Y., H. Huang, Y. Wang, Y. Yu, S. Yuan, S. Huang, M. Pan, K. Feng, and A. Xu. 2008. A novel C1q family member of amphioxus was revealed to have a partial function of vertebrate C1q molecule. J. Immunol. 181: 7024-7032.
35. Sekine, H., A. Kenjo, K. Azumi, G. Ohi, M. Takahashi, R. Kasukawa, N. Ichikawa, M. Nakata, T. Mizuochi, M. Matsushita, et al. 2001. An ancient lectin-dependent complement system in an ascidian: novel lectin isolated from the plasma of the solitary ascidian, Halocynthia roretzi. J. Immunol. 167: 4504-4510. (Pubitemid 32954328)
36. Forman, H. J., and M. Torres. 2002. Reactive oxygen species and cell signaling: respiratory burst in macrophage signaling. Am. J. Respir. Crit. Care Med. 166: S4-S8.
37. Rada, B., and T. L. Leto. 2008. Oxidative innate immune defenses by Nox/Duox family NADPH oxidases. Contrib. Microbiol. 15: 164-187.
38. Leto, T. L., and M. Geiszt. 2006. Role of Nox family NADPH oxidases in host defense. Antioxid. Redox Signal. 8: 1549-1561.
39. Klebanoff, S. J. 2005. Myeloperoxidase: friend and foe. J. Leukoc. Biol. 77: 598-625.
40. Ha, E. M., C. T. Oh, Y. S. Bae, and W. J. Lee. 2005. A direct role for dual oxidase in Drosophila gut immunity. Science 310: 847-850.
41. Royet, J., and R. Dziarski. 2007. Peptidoglycan recognition proteins: pleiotropic sensors and effectors of antimicrobial defences. Nat. Rev. Microbiol. 5: 264-277.
42. Dziarski, R., and D. Gupta. 2006. The peptidoglycan recognition proteins (PGRPs). Genome Biol. 7: 232.
43. Iwanaga, S., and B. L. Lee. 2005. Recent advances in the innate immunity of invertebrate animals. J. Biochem. Mol. Biol. 38: 128-150.
44. Zhang, S. M., Y. Zeng, and E. S. Loker. 2007. Characterization of immune genes from the schistosome host snail Biomphalaria glabrata that encode peptidoglycan recognition proteins and Gram-negative bacteria binding protein. Immunogenetics 59: 883-898.
45. Lee, C. G. 2009. Chitin, chitinases and chitinase-like proteins in allergic inflammation and tissue remodeling. Yonsei Med. J. 50: 22-30.
46. Arakane, Y., and S. Muthukrishnan. 2010. Insect chitinase and chitinase-like proteins. Cell. Mol. Life Sci. 67: 201-216.
47. Du, X. J., J. X. Wang, N. Liu, X. F. Zhao, F. H. Li, and J. H. Xiang. 2006. Identification and molecular characterization of a peritrophin-like protein from fleshy prawn (Fenneropenaeus chinensis). Mol. Immunol. 43: 1633-1644.
48. Loongyai, W., J. C. Avarre, M. Cerutti, E. Lubzens, and W. Chotigeat. 2007. Isolation and functional characterization of a new shrimp ovarian peritrophin with antimicrobial activity from Fenneropenaeus merguiensis. Mar. Biotechnol. 9: 624-637.
49. Cannon, J. P., R. N. Haire, and G. W. Litman. 2002. Identification of diversified genes that contain immunoglobulin-like variable regions in a protochordate. Nat. Immunol. 3: 1200-1207.
50. Miller, D. J., G. Hemmrich, E. E. Ball, D. C. Hayward, K. Khalturin, N. Funayama, K. Agata, and T. C. Bosch. 2007. The innate immune repertoire in cnidaria: ancestral complexity and stochastic gene loss. Genome Biol. 8: R59.
51. Papp, B., C. Pál, and L. D. Hurst. 2003. Dosage sensitivity and the evolution of gene families in yeast. Nature 424: 194-197.
52. Conant, G. C., and K. H. Wolfe. 2008. Turning a hobby into a job: how duplicated genes find new functions. Nat. Rev. Genet. 9: 938-950.
53. Nehyba, J., R. Hrdlicková, and H. R. Bose. 2009. Dynamic evolution of immune system regulators: the history of the interferon regulatory factor family. Mol. Biol. Evol. 26: 2539-2550.