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Volumn 6, Issue 13, 2015, Pages 11047-11060

Chronic liver inflammation modifies DNA methylation at the precancerous stage of murine hepatocarcinogenesis

Author keywords

5 hydroxymethylcytosine; DNA methylation; Hepatocellular carcinoma; Mdr2 (Abcb4); mtDNA deletion

Indexed keywords

5 HYDROXYMETHYLCYTOSINE; 5 METHYLCYTOSINE; INTERLEUKIN 1 RECEPTOR ASSOCIATED KINASE 1; SYNAPTOPODIN; MESSENGER RNA; MULTIDRUG RESISTANCE PROTEIN; P-GLYCOPROTEIN 2;

EID: 84929629987     PISSN: None     EISSN: 19492553     Source Type: Journal    
DOI: 10.18632/oncotarget.3567     Document Type: Article
Times cited : (22)

References (64)
  • 1
    • 84867212593 scopus 로고    scopus 로고
    • Chronic inflammation, immune escape, and oncogenesis in the liver: a unique neighborhood for novel intersections
    • Stauffer JK, Scarzello AJ, Jiang Q and Wiltrout RH. Chronic inflammation, immune escape, and oncogenesis in the liver: a unique neighborhood for novel intersections. Hepatology. 2012; 56(4):1567-1574.
    • (2012) Hepatology , vol.56 , Issue.4 , pp. 1567-1574
    • Stauffer, J.K.1    Scarzello, A.J.2    Jiang, Q.3    Wiltrout, R.H.4
  • 2
    • 0030846298 scopus 로고    scopus 로고
    • Tying it all together: epigenetics, genetics, cell cycle, and cancer
    • Baylin SB. Tying it all together: epigenetics, genetics, cell cycle, and cancer. Science. 1997; 277(5334):1948-1949.
    • (1997) Science , vol.277 , Issue.5334 , pp. 1948-1949
    • Baylin, S.B.1
  • 4
    • 67449113768 scopus 로고    scopus 로고
    • Cancer DNA methylation: molecular mechanisms and clinical implications
    • McCabe MT, Brandes JC and Vertino PM. Cancer DNA methylation: molecular mechanisms and clinical implications. Clin Cancer Res. 2009; 15(12):3927-3937.
    • (2009) Clin Cancer Res , vol.15 , Issue.12 , pp. 3927-3937
    • McCabe, M.T.1    Brandes, J.C.2    Vertino, P.M.3
  • 6
    • 40949161396 scopus 로고    scopus 로고
    • Aberrant methylation of multiple tumor suppressor genes in aging liver, chronic hepatitis, and hepatocellular carcinoma
    • Nishida N, Nagasaka T, Nishimura T, Ikai I, Boland CR and Goel A. Aberrant methylation of multiple tumor suppressor genes in aging liver, chronic hepatitis, and hepatocellular carcinoma. Hepatology. 2008; 47(3):908-918.
    • (2008) Hepatology , vol.47 , Issue.3 , pp. 908-918
    • Nishida, N.1    Nagasaka, T.2    Nishimura, T.3    Ikai, I.4    Boland, C.R.5    Goel, A.6
  • 12
    • 71849113808 scopus 로고    scopus 로고
    • Genome-wide DNA methylation profiles in precancerous conditions and cancers
    • Kanai Y. Genome-wide DNA methylation profiles in precancerous conditions and cancers. Cancer Sci. 2010; 101(1):36-45.
    • (2010) Cancer Sci , vol.101 , Issue.1 , pp. 36-45
    • Kanai, Y.1
  • 13
    • 79957485296 scopus 로고    scopus 로고
    • Epigenetic mechanisms in hepatocellular carcinoma: how environmental factors influence the epigenome
    • Herceg Z and Paliwal A. Epigenetic mechanisms in hepatocellular carcinoma: how environmental factors influence the epigenome. Mutat Res. 2011; 727(3):55-61.
    • (2011) Mutat Res , vol.727 , Issue.3 , pp. 55-61
    • Herceg, Z.1    Paliwal, A.2
  • 14
    • 0141648473 scopus 로고    scopus 로고
    • Aberrant CpG island hypermethylation along multistep hepatocarcinogenesis
    • Lee S, Lee HJ, Kim JH, Lee HS, Jang JJ and Kang GH. Aberrant CpG island hypermethylation along multistep hepatocarcinogenesis. Am J Pathol. 2003; 163(4):1371-1378.
    • (2003) Am J Pathol , vol.163 , Issue.4 , pp. 1371-1378
    • Lee, S.1    Lee, H.J.2    Kim, J.H.3    Lee, H.S.4    Jang, J.J.5    Kang, G.H.6
  • 15
    • 79959756667 scopus 로고    scopus 로고
    • Carcinogenetic risk estimation based on quantification of DNA methylation levels in liver tissue at the precancerous stage
    • Nagashio R, Arai E, Ojima H, Kosuge T, Kondo Y and Kanai Y. Carcinogenetic risk estimation based on quantification of DNA methylation levels in liver tissue at the precancerous stage. Int J Cancer. 2011; 129(5):1170-1179.
    • (2011) Int J Cancer , vol.129 , Issue.5 , pp. 1170-1179
    • Nagashio, R.1    Arai, E.2    Ojima, H.3    Kosuge, T.4    Kondo, Y.5    Kanai, Y.6
  • 16
    • 84865543987 scopus 로고    scopus 로고
    • Characteristic patterns of altered DNA methylation predict emergence of human hepatocellular carcinoma
    • Nishida N, Kudo M, Nagasaka T, Ikai I and Goel A. Characteristic patterns of altered DNA methylation predict emergence of human hepatocellular carcinoma. Hepatology. 2012; 56(3):994-1003.
    • (2012) Hepatology , vol.56 , Issue.3 , pp. 994-1003
    • Nishida, N.1    Kudo, M.2    Nagasaka, T.3    Ikai, I.4    Goel, A.5
  • 27
    • 84886860116 scopus 로고    scopus 로고
    • TET enzymes, TDG and the dynamics of DNA demethylation
    • Kohli RM and Zhang Y. TET enzymes, TDG and the dynamics of DNA demethylation. Nature. 2013; 502(7472):472-479.
    • (2013) Nature , vol.502 , Issue.7472 , pp. 472-479
    • Kohli, R.M.1    Zhang, Y.2
  • 29
    • 84879082877 scopus 로고    scopus 로고
    • To divide or not to divide:revisiting liver regeneration
    • Miyaoka Y and Miyajima A. To divide or not to divide:revisiting liver regeneration. Cell Div. 2013; 8(1):8.
    • (2013) Cell Div , vol.8 , Issue.1 , pp. 8
    • Miyaoka, Y.1    Miyajima, A.2
  • 30
    • 55949129628 scopus 로고    scopus 로고
    • Inflammatory signalling as mediator of epigenetic modulation in tissue-specific chronic inflammation
    • Backdahl L, Bushell A and Beck S. Inflammatory signalling as mediator of epigenetic modulation in tissue-specific chronic inflammation. Int J Biochem Cell Biol. 2009; 41(1):176-184.
    • (2009) Int J Biochem Cell Biol , vol.41 , Issue.1 , pp. 176-184
    • Backdahl, L.1    Bushell, A.2    Beck, S.3
  • 31
    • 84856291935 scopus 로고    scopus 로고
    • From hepatitis to hepatocellular carcinoma: a proposed model for cross-talk between inflammation and epigenetic mechanisms
    • Martin M and Herceg Z. From hepatitis to hepatocellular carcinoma: a proposed model for cross-talk between inflammation and epigenetic mechanisms. Genome Med. 2012; 4(1):8.
    • (2012) Genome Med , vol.4 , Issue.1 , pp. 8
    • Martin, M.1    Herceg, Z.2
  • 32
    • 84875129831 scopus 로고    scopus 로고
    • DNA methylation dynamics in health and disease
    • Bergman Y and Cedar H. DNA methylation dynamics in health and disease. Nat Struct Mol Biol. 2013; 20(3):274-281.
    • (2013) Nat Struct Mol Biol , vol.20 , Issue.3 , pp. 274-281
    • Bergman, Y.1    Cedar, H.2
  • 34
    • 79251600254 scopus 로고    scopus 로고
    • Progressive age-dependent DNA methylation changes start before adulthood in mouse tissues
    • Takasugi M. Progressive age-dependent DNA methylation changes start before adulthood in mouse tissues. Mech Ageing Dev. 2011; 132(1-2):65-71.
    • (2011) Mech Ageing Dev , vol.132 , Issue.1-2 , pp. 65-71
    • Takasugi, M.1
  • 35
    • 84864129535 scopus 로고    scopus 로고
    • Distribution of 5-hydroxymethylcytosine in different human tissues
    • Li W and Liu M. Distribution of 5-hydroxymethylcytosine in different human tissues. J Nucleic Acids. 2011; 2011:870726.
    • (2011) J Nucleic Acids , vol.2011 , pp. 870726
    • Li, W.1    Liu, M.2
  • 37
    • 84877336241 scopus 로고    scopus 로고
    • Decrease of 5-hydroxymethylcytosine is associated with progression of hepatocellular carcinoma through downregulation of TET1
    • Liu C, Liu L, Chen X, Shen J, Shan J, Xu Y, Yang Z, Wu L, Xia F, Bie P, Cui Y, Bian XW and Qian C. Decrease of 5-hydroxymethylcytosine is associated with progression of hepatocellular carcinoma through downregulation of TET1. PLoS One. 2013; 8(5):e62828.
    • (2013) PLoS One , vol.8 , Issue.5
    • Liu, C.1    Liu, L.2    Chen, X.3    Shen, J.4    Shan, J.5    Xu, Y.6    Yang, Z.7    Wu, L.8    Xia, F.9    Bie, P.10    Cui, Y.11    Bian, X.W.12    Qian, C.13
  • 38
    • 84928615862 scopus 로고    scopus 로고
    • Induction of chronic oxidative stress, chronic inflammation and aberrant patterns of DNA methylation in the liver of titaniumexposed CBA/CaJ mice
    • Jangiam W, Tungjai M and Rithidech KN. Induction of chronic oxidative stress, chronic inflammation and aberrant patterns of DNA methylation in the liver of titaniumexposed CBA/CaJ mice. Int J Radiat Biol. 2015:1-10.
    • (2015) Int J Radiat Biol , pp. 1-10
    • Jangiam, W.1    Tungjai, M.2    Rithidech, K.N.3
  • 39
    • 85027914740 scopus 로고    scopus 로고
    • Decrease of 5-hydroxymethylcytosine in rat liver with subchronic exposure to genotoxic carcinogens riddelliine and aristolochic acid
    • Lian CG, Xu S, Guo W, Yan J, Frank MY, Liu R, Liu C, Chen Y, Murphy GF and Chen T. Decrease of 5-hydroxymethylcytosine in rat liver with subchronic exposure to genotoxic carcinogens riddelliine and aristolochic acid. Mol Carcinog. 2014.
    • (2014) Mol Carcinog
    • Lian, C.G.1    Xu, S.2    Guo, W.3    Yan, J.4    Frank, M.Y.5    Liu, R.6    Liu, C.7    Chen, Y.8    Murphy, G.F.9    Chen, T.10
  • 40
    • 84883527566 scopus 로고    scopus 로고
    • Transient reduction of 5-methylcytosine and 5-hydroxymethylcytosine is associated with active DNA demethylation during regeneration of zebrafish fin
    • Hirose K, Shimoda N and Kikuchi Y. Transient reduction of 5-methylcytosine and 5-hydroxymethylcytosine is associated with active DNA demethylation during regeneration of zebrafish fin. Epigenetics. 2013; 8(9):899-906.
    • (2013) Epigenetics , vol.8 , Issue.9 , pp. 899-906
    • Hirose, K.1    Shimoda, N.2    Kikuchi, Y.3
  • 42
    • 84929626251 scopus 로고    scopus 로고
    • Aging alters hepatic DNA hydroxymethylation, as measured by liquid chromatography/mass spectrometry
    • Tammen SA, Dolnikowski GG, Ausman LM, Liu Z, Kim KC, Friso S and Choi SW. Aging alters hepatic DNA hydroxymethylation, as measured by liquid chromatography/mass spectrometry. J Cancer Prev. 2014; 19(4):301-308.
    • (2014) J Cancer Prev , vol.19 , Issue.4 , pp. 301-308
    • Tammen, S.A.1    Dolnikowski, G.G.2    Ausman, L.M.3    Liu, Z.4    Kim, K.C.5    Friso, S.6    Choi, S.W.7
  • 43
    • 84899527428 scopus 로고    scopus 로고
    • High expression of 5-hydroxymethylcytosine and isocitrate dehydrogenase 2 is associated with favorable prognosis after curative resection of hepatocellular carcinoma
    • Liu WR, Tian MX, Jin L, Yang LX, Ding ZB, Shen YH, Peng YF, Zhou J, Qiu SJ, Dai Z, Fan J and Shi YH. High expression of 5-hydroxymethylcytosine and isocitrate dehydrogenase 2 is associated with favorable prognosis after curative resection of hepatocellular carcinoma. J Exp Clin Cancer Res. 2014; 33:32.
    • (2014) J Exp Clin Cancer Res , vol.33 , pp. 32
    • Liu, W.R.1    Tian, M.X.2    Jin, L.3    Yang, L.X.4    Ding, Z.B.5    Shen, Y.H.6    Peng, Y.F.7    Zhou, J.8    Qiu, S.J.9    Dai, Z.10    Fan, J.11    Shi, Y.H.12
  • 45
    • 84929628130 scopus 로고    scopus 로고
    • Whole-genome bisulfite sequencing of multiple individuals reveals complementary roles of promoter and gene body methylation in transcriptional regulation
    • Lou S, Lee HM, Qin H, Li JW, Gao Z, Liu X, Chan LL, Lam V, So WY, Wang Y, Lok S, Wang J, Ma R, et al. Whole-genome bisulfite sequencing of multiple individuals reveals complementary roles of promoter and gene body methylation in transcriptional regulation. Genome Biol. 2014; 15(7):408.
    • (2014) Genome Biol , vol.15 , Issue.7 , pp. 408
    • Lou, S.1    Lee, H.M.2    Qin, H.3    Li, J.W.4    Gao, Z.5    Liu, X.6    Chan, L.L.7    Lam, V.8    So, W.Y.9    Wang, Y.10    Lok, S.11    Wang, J.12    Ma, R.13
  • 47
    • 1542345767 scopus 로고    scopus 로고
    • Somatic mutations in the D-loop and decrease in the copy number of mitochondrial DNA in human hepatocellular carcinoma
    • Lee HC, Li SH, Lin JC, Wu CC, Yeh DC and Wei YH. Somatic mutations in the D-loop and decrease in the copy number of mitochondrial DNA in human hepatocellular carcinoma. Mutat Res. 2004; 547(1-2):71-78.
    • (2004) Mutat Res , vol.547 , Issue.1-2 , pp. 71-78
    • Lee, H.C.1    Li, S.H.2    Lin, J.C.3    Wu, C.C.4    Yeh, D.C.5    Wei, Y.H.6
  • 49
    • 0033515783 scopus 로고    scopus 로고
    • Human livers with cirrhosis and hepatocellular carcinoma have less mitochondrial DNA deletion than normal human livers
    • Kotake K, Nonami T, Kurokawa T, Nakao A, Murakami T and Shimomura Y. Human livers with cirrhosis and hepatocellular carcinoma have less mitochondrial DNA deletion than normal human livers. Life Sci. 1999; 64(19):1785-1791.
    • (1999) Life Sci , vol.64 , Issue.19 , pp. 1785-1791
    • Kotake, K.1    Nonami, T.2    Kurokawa, T.3    Nakao, A.4    Murakami, T.5    Shimomura, Y.6
  • 51
    • 84886111619 scopus 로고    scopus 로고
    • DNA methylation age of human tissues and cell types
    • Horvath S. DNA methylation age of human tissues and cell types. Genome Biol. 2013; 14(10):R115.
    • (2013) Genome Biol , vol.14 , Issue.10 , pp. R115
    • Horvath, S.1
  • 52
    • 74549131213 scopus 로고    scopus 로고
    • The assessment of methylated BASP1 and SRD5A2 levels in the detection of early hepatocellular carcinoma
    • Tsunedomi R, Ogawa Y, Iizuka N, Sakamoto K, Tamesa T, Moribe T and Oka M. The assessment of methylated BASP1 and SRD5A2 levels in the detection of early hepatocellular carcinoma. Int J Oncol. 2010; 36(1):205-212.
    • (2010) Int J Oncol , vol.36 , Issue.1 , pp. 205-212
    • Tsunedomi, R.1    Ogawa, Y.2    Iizuka, N.3    Sakamoto, K.4    Tamesa, T.5    Moribe, T.6    Oka, M.7
  • 54
    • 84874266463 scopus 로고    scopus 로고
    • Elucidating the landscape of aberrant DNA methylation in hepatocellular carcinoma
    • Song MA, Tiirikainen M, Kwee S, Okimoto G, Yu H and Wong LL. Elucidating the landscape of aberrant DNA methylation in hepatocellular carcinoma. PLoS One. 2013; 8(2):e55761.
    • (2013) PLoS One , vol.8 , Issue.2
    • Song, M.A.1    Tiirikainen, M.2    Kwee, S.3    Okimoto, G.4    Yu, H.5    Wong, L.L.6
  • 56
    • 67049172488 scopus 로고    scopus 로고
    • Interleukin-1 participates in the progression from liver injury to fibrosis
    • Gieling RG, Wallace K and Han YP. Interleukin-1 participates in the progression from liver injury to fibrosis. Am J Physiol Gastrointest Liver Physiol. 2009; 296(6):G1324-1331.
    • (2009) Am J Physiol Gastrointest Liver Physiol , vol.296 , Issue.6 , pp. G1324-1331
    • Gieling, R.G.1    Wallace, K.2    Han, Y.P.3
  • 58
    • 58649086310 scopus 로고    scopus 로고
    • Down-regulation of the de-ubiquitinating enzyme ubiquitin-specific protease 2 contributes to tumor necrosis factor-alpha-induced hepatocyte survival
    • Haimerl F, Erhardt A, Sass G and Tiegs G. Down-regulation of the de-ubiquitinating enzyme ubiquitin-specific protease 2 contributes to tumor necrosis factor-alpha-induced hepatocyte survival. J Biol Chem. 2009; 284(1):495-504.
    • (2009) J Biol Chem , vol.284 , Issue.1 , pp. 495-504
    • Haimerl, F.1    Erhardt, A.2    Sass, G.3    Tiegs, G.4
  • 59
    • 84255200412 scopus 로고    scopus 로고
    • 5-Hydroxymethylcytosine is strongly depleted in human cancers but its levels do not correlate with IDH1 mutations
    • Jin SG, Jiang Y, Qiu R, Rauch TA, Wang Y, Schackert G, Krex D, Lu Q and Pfeifer GP. 5-Hydroxymethylcytosine is strongly depleted in human cancers but its levels do not correlate with IDH1 mutations. Cancer Res. 2011; 71(24):7360-7365.
    • (2011) Cancer Res , vol.71 , Issue.24 , pp. 7360-7365
    • Jin, S.G.1    Jiang, Y.2    Qiu, R.3    Rauch, T.A.4    Wang, Y.5    Schackert, G.6    Krex, D.7    Lu, Q.8    Pfeifer, G.P.9
  • 60
    • 24044479394 scopus 로고    scopus 로고
    • Estimating the total mouse DNA methylation according to the B1 repetitive elements
    • Jeong KS and Lee S. Estimating the total mouse DNA methylation according to the B1 repetitive elements. Biochem Biophys Res Commun. 2005; 335(4):1211-1216.
    • (2005) Biochem Biophys Res Commun , vol.335 , Issue.4 , pp. 1211-1216
    • Jeong, K.S.1    Lee, S.2
  • 61
    • 0036856355 scopus 로고    scopus 로고
    • MethPrimer: designing primers for methylation PCRs
    • Li LC and Dahiya R. MethPrimer: designing primers for methylation PCRs. Bioinformatics. 2002; 18(11):1427-1431.
    • (2002) Bioinformatics , vol.18 , Issue.11 , pp. 1427-1431
    • Li, L.C.1    Dahiya, R.2


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