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Volumn 1306, Issue , 2015, Pages 71-79

Phosphopeptide profiling of receptor kinase mutants

(2)  Wu, Xu Na a   Schulze, Waltraud X a  

a NONE

Author keywords

Label free quantitation; Mass spectrometry; Microsome; Phosphopeptide enrichment

Indexed keywords

PHOSPHOPEPTIDE; PROTEIN KINASE; RECEPTOR LIKE KINASE; UNCLASSIFIED DRUG; VEGETABLE PROTEIN; ARABIDOPSIS PROTEIN;

EID: 84928664322     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-4939-2648-0_5     Document Type: Article
Times cited : (6)

References (32)
  • 1
    • 84903412261 scopus 로고    scopus 로고
    • The Arabidopsis Kinome: Phylogeny and evolutionary insights into functional diversification
    • Zulawski M, Schulze G, Braginets R, Hartmann S, Schulze WX (2014) The Arabidopsis Kinome: phylogeny and evolutionary insights into functional diversification. BMC Genomics 15:548
    • (2014) BMC Genomics , vol.15 , pp. 548
    • Zulawski, M.1    Schulze, G.2    Braginets, R.3    Hartmann, S.4    Schulze, W.X.5
  • 2
    • 0037178776 scopus 로고    scopus 로고
    • BAK1, an Arabidopsis LRR receptor-like protein kinase, interacts with BRI1 and modulates brassinosteroid signaling
    • Li J, Wen J, Lease KA, Doke JT, Tax FE, Walker JC (2002) BAK1, an Arabidopsis LRR receptor-like protein kinase, interacts with BRI1 and modulates brassinosteroid signaling. Cell 110(2):213-222
    • (2002) Cell , vol.110 , Issue.2 , pp. 213-222
    • Li, J.1    Wen, J.2    Lease, K.A.3    Doke, J.T.4    Tax, F.E.5    Walker, J.C.6
  • 4
    • 0033101715 scopus 로고    scopus 로고
    • The CLAVATA1 receptor-like kinase requires CLAVATA3 for its assembly into a signaling complex that includes KAPP and a Rho-related protein
    • Trotochaud AE, Hao T, Wu G, Yang Z, Clark SE (1999) The CLAVATA1 receptor-like kinase requires CLAVATA3 for its assembly into a signaling complex that includes KAPP and a Rho-related protein. Plant Cell 11(3): 393-406
    • (1999) Plant Cell , vol.11 , Issue.3 , pp. 393-406
    • Trotochaud, A.E.1    Hao, T.2    Wu, G.3    Yang, Z.4    Clark, S.E.5
  • 5
    • 48549096822 scopus 로고    scopus 로고
    • Sequential transphosphorylation of the BRI1/ BAK1 receptor kinase complex impacts early events in brassinosteroid signaling
    • Wang X, Kota U, He K, Blackburn K, Li J, Goshe MB, Huber SC, Clouse SD (2008) Sequential transphosphorylation of the BRI1/ BAK1 receptor kinase complex impacts early events in brassinosteroid signaling. Dev Cell 15(2):220-235
    • (2008) Dev Cell , vol.15 , Issue.2 , pp. 220-235
    • Wang, X.1    Kota, U.2    He, K.3    Blackburn, K.4    Li, J.5    Goshe, M.B.6    Huber, S.C.7    Clouse, S.D.8
  • 6
    • 84890677480 scopus 로고    scopus 로고
    • Stable isotope metabolic labeling-based quantitative phosphoproteomic analysis of Arabidopsis mutants reveals ethylene-regulated time-dependent phosphoproteins and putative substrates of constitutive triple response 1 kinase
    • Yang Z, Guo G, Zhang M, Liu CY, Hu Q, Lam H, Cheng H, Xue Y, Li J, Li N (2013) Stable isotope metabolic labeling-based quantitative phosphoproteomic analysis of Arabidopsis mutants reveals ethylene-regulated time-dependent phosphoproteins and putative substrates of constitutive triple response 1 kinase. Mol Cell Proteomics 12(12): 3559-3582
    • (2013) Mol Cell Proteomics , vol.12 , Issue.12 , pp. 3559-3582
    • Yang, Z.1    Guo, G.2    Zhang, M.3    Liu, C.Y.4    Hu, Q.5    Lam, H.6    Cheng, H.7    Xue, Y.8    Li, J.9    Li, N.10
  • 7
    • 84892937619 scopus 로고    scopus 로고
    • A peptide hormone and its receptor protein kinase regulate plant cell expansion
    • Haruta M, Sabat G, Stecker K, Minkoff BB, Sussman MR (2014) A peptide hormone and its receptor protein kinase regulate plant cell expansion. Science 343(6169):408-411
    • (2014) Science , vol.343 , Issue.6169 , pp. 408-411
    • Haruta, M.1    Sabat, G.2    Stecker, K.3    Minkoff, B.B.4    Sussman, M.R.5
  • 8
    • 84859164078 scopus 로고    scopus 로고
    • Nitrate and ammonium lead to distinct global dynamic phosphorylation patterns when resupplied to nitrogen-starved Arabidopsis seedlings
    • Engelsberger WR, Schulze WX (2012) Nitrate and ammonium lead to distinct global dynamic phosphorylation patterns when resupplied to nitrogen-starved Arabidopsis seedlings. Plant J 69(6):978-995
    • (2012) Plant J , vol.69 , Issue.6 , pp. 978-995
    • Engelsberger, W.R.1    Schulze, W.X.2
  • 9
    • 77957682118 scopus 로고    scopus 로고
    • In planta changes in protein phosphorylation induced by the plant hormone abscisic acid
    • Kline KG, Barrett-Wilt GA, Sussman MR (2010) In planta changes in protein phosphorylation induced by the plant hormone abscisic acid. Proc Natl Acad Sci U S A 107(36): 15986-15991
    • (2010) Proc Natl Acad Sci U S A , vol.107 , Issue.36 , pp. 15986-15991
    • Kline, K.G.1    Barrett-Wilt, G.A.2    Sussman, M.R.3
  • 10
    • 35648996970 scopus 로고    scopus 로고
    • Temporal analysis of sucrose-induced phosphorylation changes in plasma membrane proteins of Arabidopsis
    • Niittylä T, Fuglsang AT, Palmgren MG, Frommer WB, Schulze WX (2007) Temporal analysis of sucrose-induced phosphorylation changes in plasma membrane proteins of Arabidopsis. Mol Cell Proteomics 6(10): 1711-1726
    • (2007) Mol Cell Proteomics , vol.6 , Issue.10 , pp. 1711-1726
    • Niittylä, T.1    Fuglsang, A.T.2    Palmgren, M.G.3    Frommer, W.B.4    Schulze, W.X.5
  • 11
    • 77954297255 scopus 로고    scopus 로고
    • Comparative analysis of phytohormone-responsive phosphoproteins in Arabidopsis thaliana using TiO2-phosphopeptide enrichment and mass accuracy precursor alignment
    • Chen Y, Hoehenwarter W, Weckwerth W (2010) Comparative analysis of phytohormone-responsive phosphoproteins in Arabidopsis thaliana using TiO2-phosphopeptide enrichment and mass accuracy precursor alignment. Plant J 63(1):1-17
    • (2010) Plant J , vol.63 , Issue.1 , pp. 1-17
    • Chen, Y.1    Hoehenwarter, W.2    Weckwerth, W.3
  • 13
    • 38549127781 scopus 로고    scopus 로고
    • PhosPhAt: A database of phosphorylation sites in Arabidopsis thaliana and a plant-specific phosphorylation site predictor
    • Heazlewood JL, Durek P, Hummel J, Selbig J, Weckwerth W, Walther D, Schulze WX (2008) PhosPhAt: a database of phosphorylation sites in Arabidopsis thaliana and a plant-specific phosphorylation site predictor. Nucleic Acids Res 36(Database issue):D1015-D1021
    • (2008) Nucleic Acids Res , vol.36 , Issue.DATABASE ISSUE , pp. D1015-D1021
    • Heazlewood, J.L.1    Durek, P.2    Hummel, J.3    Selbig, J.4    Weckwerth, W.5    Walther, D.6    Schulze, W.X.7
  • 14
    • 84901029041 scopus 로고    scopus 로고
    • Reconstruction and analysis of nutrient-induced phosphorylation networks in Arabidopsis thaliana
    • Duan G, Walther D, Schulze WX (2013) Reconstruction and analysis of nutrient-induced phosphorylation networks in Arabidopsis thaliana. Front Plant Sci 4:540
    • (2013) Front Plant Sci , vol.4 , pp. 540
    • Duan, G.1    Walther, D.2    Schulze, W.X.3
  • 16
    • 0030887842 scopus 로고    scopus 로고
    • Engineering unnatural nucleotide specificity for Rous sarcoma virus tyrosine kinase to uniquely label its direct substrates
    • Shah K, Liu Y, Deirmengian C, Shokat KM (1997) Engineering unnatural nucleotide specificity for Rous sarcoma virus tyrosine kinase to uniquely label its direct substrates. Proc Natl Acad Sci U S A 94(8):3565-3570
    • (1997) Proc Natl Acad Sci U S A , vol.94 , Issue.8 , pp. 3565-3570
    • Shah, K.1    Liu, Y.2    Deirmengian, C.3    Shokat, K.M.4
  • 18
    • 55849147636 scopus 로고    scopus 로고
    • Quantitative phosphoproteome analysis of a mouse liver cell line reveals specificity of phosphatase inhibitors
    • Pan C, Gnad F, Olsen JV, Mann M (2008) Quantitative phosphoproteome analysis of a mouse liver cell line reveals specificity of phosphatase inhibitors. Proteomics 8(21): 4534-4546
    • (2008) Proteomics , vol.8 , Issue.21 , pp. 4534-4546
    • Pan, C.1    Gnad, F.2    Olsen, J.V.3    Mann, M.4
  • 22
    • 84857950845 scopus 로고    scopus 로고
    • A comprehensive dataset of genes with a loss-of-function mutant phenotype in Arabidopsis
    • Lloyd J, Meinke D (2012) A comprehensive dataset of genes with a loss-of-function mutant phenotype in Arabidopsis. Plant Physiol 158(3):1115-1129
    • (2012) Plant Physiol , vol.158 , Issue.3 , pp. 1115-1129
    • Lloyd, J.1    Meinke, D.2
  • 23
    • 79952146183 scopus 로고    scopus 로고
    • Arabidopsis decuple mutant reveals the importance of SnRK2 kinases in osmotic stress responses in vivo
    • Fujii H, Verslues PE, Zhu JK (2011) Arabidopsis decuple mutant reveals the importance of SnRK2 kinases in osmotic stress responses in vivo. Proc Natl Acad Sci U S A 108(4):1717-1722
    • (2011) Proc Natl Acad Sci U S A , vol.108 , Issue.4 , pp. 1717-1722
    • Fujii, H.1    Verslues, P.E.2    Zhu, J.K.3
  • 25
    • 84903690777 scopus 로고    scopus 로고
    • A kinase-phosphatase signaling module with BSK8 and BSL2 involved in regulation of sucrose-phosphate synthase
    • Wu X, Sklodowski K, Encke B, Schulze WX (2014) A kinase-phosphatase signaling module with BSK8 and BSL2 involved in regulation of sucrose-phosphate synthase. J Proteome Res 13(7):3397-3409
    • (2014) J Proteome Res , vol.13 , Issue.7 , pp. 3397-3409
    • Wu, X.1    Sklodowski, K.2    Encke, B.3    Schulze, W.X.4
  • 26
    • 0346874342 scopus 로고    scopus 로고
    • Proteomic characterization of the human centrosome by protein correlation profiling
    • Andersen JS, Wilkinson CJ, Mayor T, Mortensen P, Nigg EA, Mann M (2003) Proteomic characterization of the human centrosome by protein correlation profiling. Nature 426(6966):570-574
    • (2003) Nature , vol.426 , Issue.6966 , pp. 570-574
    • Andersen, J.S.1    Wilkinson, C.J.2    Mayor, T.3    Mortensen, P.4    Nigg, E.A.5    Mann, M.6
  • 27
    • 15344341157 scopus 로고    scopus 로고
    • Stable isotope-free relative and absolute quantitation of protein phosphorylation stoichiometry by MS
    • Steen H, Jebanathirajah JA, Springer M, Kirschner MW (2005) Stable isotope-free relative and absolute quantitation of protein phosphorylation stoichiometry by MS. Proc Natl Acad Sci U S A 102(11):3948-3953
    • (2005) Proc Natl Acad Sci U S A , vol.102 , Issue.11 , pp. 3948-3953
    • Steen, H.1    Jebanathirajah, J.A.2    Springer, M.3    Kirschner, M.W.4
  • 28
    • 84859164078 scopus 로고    scopus 로고
    • Nitrate and ammonium lead to distinct global dynamic phosphorylation patterns when resupplied to nitrogen starved Arabidopsis seedlings
    • Engelsberger WR, Schulze WX (2012) Nitrate and ammonium lead to distinct global dynamic phosphorylation patterns when resupplied to nitrogen starved Arabidopsis seedlings. Plant J 69(6):978-995
    • (2012) Plant J , vol.69 , Issue.6 , pp. 978-995
    • Engelsberger, W.R.1    Schulze, W.X.2
  • 29
    • 84886840624 scopus 로고    scopus 로고
    • Metabolic labeling and membrane fractionation for comparative proteomic analysis of Arabidopsis thaliana suspension cell cultures
    • Szymanski WG, Kierszniowska S, Schulze WX (2013) Metabolic labeling and membrane fractionation for comparative proteomic analysis of Arabidopsis thaliana suspension cell cultures. J Vis Exp 79:e50535
    • (2013) J Vis Exp , vol.79
    • Szymanski, W.G.1    Kierszniowska, S.2    Schulze, W.X.3
  • 30
    • 0037317228 scopus 로고    scopus 로고
    • Stop and go extraction tips for matrix-assisted laser desorption/ionization, nanoelectrospray, and LC/MS sample pretreatment in proteomics
    • Rappsilber J, Ishihama Y, Mann M (2003) Stop and go extraction tips for matrix-assisted laser desorption/ionization, nanoelectrospray, and LC/MS sample pretreatment in proteomics. Anal Chem 75(3):663-670
    • (2003) Anal Chem , vol.75 , Issue.3 , pp. 663-670
    • Rappsilber, J.1    Ishihama, Y.2    Mann, M.3
  • 31
    • 57449099865 scopus 로고    scopus 로고
    • MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification
    • Cox J, Mann M (2008) MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification. Nat Biotechnol 26(12):1367-1372
    • (2008) Nat Biotechnol , vol.26 , Issue.12 , pp. 1367-1372
    • Cox, J.1    Mann, M.2


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