-
1
-
-
0032837907
-
The 14-3-3 proteins: Cellular regulators of plant metabolism
-
Chung, H.J., Sehnke, P.C. and Ferl, R.J. (1999) The 14-3-3 proteins: cellular regulators of plant metabolism. Trends Plant Sci., 4 367-371.
-
(1999)
Trends Plant Sci
, vol.4
, pp. 367-371
-
-
Chung, H.J.1
Sehnke, P.C.2
Ferl, R.J.3
-
2
-
-
0036518996
-
Phosphotyrosine-binding domains in signal transduction
-
Yaffe, M.B. (2002) Phosphotyrosine-binding domains in signal transduction. Nat. Rev. Mol. Cell Biol., 3, 177-186.
-
(2002)
Nat. Rev. Mol. Cell Biol
, vol.3
, pp. 177-186
-
-
Yaffe, M.B.1
-
3
-
-
0842346438
-
Specificity in signal transduction: From phosphotyrosine-SH2 domain interactions to complex cellular systems
-
Pawson, T. (2004) Specificity in signal transduction: From phosphotyrosine-SH2 domain interactions to complex cellular systems. Cell, 116, 191-203.
-
(2004)
Cell
, vol.116
, pp. 191-203
-
-
Pawson, T.1
-
4
-
-
0026484261
-
SH2 and SH3 domains: From structure to function
-
Pawson, T. and Gish, G.D. (1992) SH2 and SH3 domains: From structure to function. Cell, 71, 359-362.
-
(1992)
Cell
, vol.71
, pp. 359-362
-
-
Pawson, T.1
Gish, G.D.2
-
5
-
-
0034616224
-
Phosphorylation-dependent interaction between plant plasma membrane H(+)ATPase and 14-3-3 proteins
-
Camoni, L., Iori, V., Marra, M. and Aducci, P. (2000) Phosphorylation-dependent interaction between plant plasma membrane H(+)ATPase and 14-3-3 proteins. J. Biol. Chem., 275, 99919-99923.
-
(2000)
J. Biol. Chem
, vol.275
, pp. 99919-99923
-
-
Camoni, L.1
Iori, V.2
Marra, M.3
Aducci, P.4
-
6
-
-
0038377588
-
The Arabidopsis CDPK-SnRK superfamily of protein kinases
-
Hrabak, E.M., Chan, C.W., Gribskov, M., Harper, J.F., Choi, J.H., Haiford, N., Kudla, J., Luan, S., Nimmo, H.G. et al. (2003) The Arabidopsis CDPK-SnRK superfamily of protein kinases. Plant Physiol. 132, 666-680.
-
(2003)
Plant Physiol
, vol.132
, pp. 666-680
-
-
Hrabak, E.M.1
Chan, C.W.2
Gribskov, M.3
Harper, J.F.4
Choi, J.H.5
Haiford, N.6
Kudla, J.7
Luan, S.8
Nimmo, H.G.9
-
7
-
-
23944457745
-
Identification and functional analysis of in vivo phosphorylation sites of the Arabidopsis Brassinosteroid-insensitive 1 receptor kinase
-
Wang, X., Goshe, M.B., Sonderblom, E.J., Phinney, B.S., Kuchar, J.A., Li, J., Asami, T., Yoshida, S., Huber, S.C. et al. (2005) Identification and functional analysis of in vivo phosphorylation sites of the Arabidopsis Brassinosteroid-insensitive 1 receptor kinase. Plant Cell, 17, 1685-1703.
-
(2005)
Plant Cell
, vol.17
, pp. 1685-1703
-
-
Wang, X.1
Goshe, M.B.2
Sonderblom, E.J.3
Phinney, B.S.4
Kuchar, J.A.5
Li, J.6
Asami, T.7
Yoshida, S.8
Huber, S.C.9
-
8
-
-
15744398710
-
Regulation of plant symbiosis receptor kinase through serine and threonine phosphorylation
-
Yoshida, S. and Pamiske, M. (2005) Regulation of plant symbiosis receptor kinase through serine and threonine phosphorylation. J. Biol. Chem., 280, 9203-9209.
-
(2005)
J. Biol. Chem
, vol.280
, pp. 9203-9209
-
-
Yoshida, S.1
Pamiske, M.2
-
9
-
-
84890499160
-
Combining metal oxide affinity chromatography (MOAC) and selective mass spectrometry for robust identification of in vivo protein phosphorylation sites
-
Wolschin, F. and Weckwerth, W. (2005) Combining metal oxide affinity chromatography (MOAC) and selective mass spectrometry for robust identification of in vivo protein phosphorylation sites. Plant Methods, 1, 1-10.
-
(2005)
Plant Methods
, vol.1
, pp. 1-10
-
-
Wolschin, F.1
Weckwerth, W.2
-
10
-
-
29144521559
-
An integrated strategy for identification and relative quantification of site-specific protein phosphorylation using liquid chromatography coupled to MS2/MS3
-
Wolschin, F., Lehmann, U., Glinski, M. and Weckwerth, W. (2005) An integrated strategy for identification and relative quantification of site-specific protein phosphorylation using liquid chromatography coupled to MS2/MS3. Rapid Commun. Mass Sp., 19, 3626-3632.
-
(2005)
Rapid Commun. Mass Sp
, vol.19
, pp. 3626-3632
-
-
Wolschin, F.1
Lehmann, U.2
Glinski, M.3
Weckwerth, W.4
-
11
-
-
11444263845
-
Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry
-
Nühse, T.S., Stensballe, A., Jensen, O.N. and Peck, J. (2003) Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry. Mol. Cell. Proteomics, 2, 1234-1243.
-
(2003)
Mol. Cell. Proteomics
, vol.2
, pp. 1234-1243
-
-
Nühse, T.S.1
Stensballe, A.2
Jensen, O.N.3
Peck, J.4
-
12
-
-
4544291080
-
Phosphoproteomics of the Arabidopsis plasma membrane and a new phosphorylation site database
-
Nühse, T.S., Stensballe, A., Jensen, O.N. and Peck, S.C. (2004) Phosphoproteomics of the Arabidopsis plasma membrane and a new phosphorylation site database. Plant Cell, 16, 2394-23405.
-
(2004)
Plant Cell
, vol.16
, pp. 2394-23405
-
-
Nühse, T.S.1
Stensballe, A.2
Jensen, O.N.3
Peck, S.C.4
-
13
-
-
34547110110
-
Quantitative phospho-proteomics of early elicitor signalling in Arabidopsis
-
Benschop, J.J., Mohammed, S., O'Flaherty, M., Heck, A.J., Slijper, M. and Menke, F.L. (2007) Quantitative phospho-proteomics of early elicitor signalling in Arabidopsis. Mol. Cell. Proteomics, 6, 1705-1713.
-
(2007)
Mol. Cell. Proteomics
, vol.6
, pp. 1705-1713
-
-
Benschop, J.J.1
Mohammed, S.2
O'Flaherty, M.3
Heck, A.J.4
Slijper, M.5
Menke, F.L.6
-
14
-
-
35648996970
-
Temporal analysis of sucrose-induced phosphorylation changes in plasma membrane proteins of Arabidopsis
-
Niittylä, T., Fuglsang, A.T., Palmgren, M.G., Frommer, W.B. and Schulze, W.X. (2007) Temporal analysis of sucrose-induced phosphorylation changes in plasma membrane proteins of Arabidopsis. Mol. Cell. Proteomics, 6, 1711-1726.
-
(2007)
Mol. Cell. Proteomics
, vol.6
, pp. 1711-1726
-
-
Niittylä, T.1
Fuglsang, A.T.2
Palmgren, M.G.3
Frommer, W.B.4
Schulze, W.X.5
-
15
-
-
33745651889
-
Phosphoproteomics reveals extensive in vivo phosphorylation of Arabidopsis proteins involved in RNA metabolism
-
de la Fuente van Bentem, S., Anrather, D., Roitinger, E., Djamei, A., Hufnagl, T., Barta, A., Csaszar, E., Dohnal, I., Lecourieux, D. et al. (2006) Phosphoproteomics reveals extensive in vivo phosphorylation of Arabidopsis proteins involved in RNA metabolism. Nucleic Acids Res., 34, 3267-3278.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 3267-3278
-
-
de la Fuente van Bentem, S.1
Anrather, D.2
Roitinger, E.3
Djamei, A.4
Hufnagl, T.5
Barta, A.6
Csaszar, E.7
Dohnal, I.8
Lecourieux, D.9
-
16
-
-
33750456519
-
Global, in vivo, and site-specific phosphorylation dynamics in signaling networks
-
Olsen, J.V., Blagoev, B., Gnad, F., Macek, B., Kumar, C., Mortensen, P. and Mann, M. (2006) Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. Cell, 127, 635-648.
-
(2006)
Cell
, vol.127
, pp. 635-648
-
-
Olsen, J.V.1
Blagoev, B.2
Gnad, F.3
Macek, B.4
Kumar, C.5
Mortensen, P.6
Mann, M.7
-
17
-
-
34447637634
-
ProMEX: A mass spectral reference database for proteins and, protein phosphorylation sites
-
Hummel, J., Niemann, M., Wienkoop, S., Schulze, W., Steinhauser, D., Selbig, J., Walther, D. and Weckwerth, W. (2007) ProMEX: A mass spectral reference database for proteins and, protein phosphorylation sites. BMC Bioinformatics, 8, 216.
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 216
-
-
Hummel, J.1
Niemann, M.2
Wienkoop, S.3
Schulze, W.4
Steinhauser, D.5
Selbig, J.6
Walther, D.7
Weckwerth, W.8
-
18
-
-
27644593240
-
Differential multisite phosphorylation of the trehalose-6-phosphate synthase gene family in Arabidopsis thaliana: A mass spectrometry-based process for multiparallel peptide library phosphorylation analysis
-
Glinski, M. and Weckwerth, W. (2005) Differential multisite phosphorylation of the trehalose-6-phosphate synthase gene family in Arabidopsis thaliana: A mass spectrometry-based process for multiparallel peptide library phosphorylation analysis. Mol. Cell. Proteomics, 4, 1614-1625.
-
(2005)
Mol. Cell. Proteomics
, vol.4
, pp. 1614-1625
-
-
Glinski, M.1
Weckwerth, W.2
-
19
-
-
0035180589
-
The Arabidopsis Information Resource (TAIR): A comprehensive database and web-based information retrieval, analysis, and visualization system for a model plant
-
Huala, E., Dickerman, A.W., Garcia-Hernandez, M., Weems, D., Reiser, L., LaFond, F., Hanley, D., Kiphart, D., Zhuang, M. et al. (2001) The Arabidopsis Information Resource (TAIR): A comprehensive database and web-based information retrieval, analysis, and visualization system for a model plant. Nucleic Acids Res., 29, 102-105.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 102-105
-
-
Huala, E.1
Dickerman, A.W.2
Garcia-Hernandez, M.3
Weems, D.4
Reiser, L.5
LaFond, F.6
Hanley, D.7
Kiphart, D.8
Zhuang, M.9
-
20
-
-
0033434080
-
Probability-based protein identification by searching sequence databases using mass spectrometry data
-
Perkins, D.N., Pappin, D.J.C., Creasy, D.M. and Cottrell, J.S. (1999) Probability-based protein identification by searching sequence databases using mass spectrometry data. Electrophoresis, 20, 3551-3567.
-
(1999)
Electrophoresis
, vol.20
, pp. 3551-3567
-
-
Perkins, D.N.1
Pappin, D.J.C.2
Creasy, D.M.3
Cottrell, J.S.4
-
21
-
-
0033579464
-
Sequence- and structure-based prediction of eucaryotic protein phosphorylation sites
-
Blom, N., Gammeltoft, S, and Brunak, S. (1999) Sequence- and structure-based prediction of eucaryotic protein phosphorylation sites. J. Mol. Biol., 294, 1351-1362.
-
(1999)
J. Mol. Biol
, vol.294
, pp. 1351-1362
-
-
Blom, N.1
Gammeltoft, S.2
Brunak, S.3
-
22
-
-
0020524559
-
A method of comparing the areas under receiver operating characteristic curves derived from the same cases
-
Hanley, J.A. and McNeil, B.J. (1983) A method of comparing the areas under receiver operating characteristic curves derived from the same cases. Radiology, 3, 3.
-
(1983)
Radiology
, vol.3
, pp. 3
-
-
Hanley, J.A.1
McNeil, B.J.2
-
23
-
-
0034069495
-
Gene ontology: Tool for the unification of biology. The Gene Ontology Consortium
-
Ashburner, M., Ball, C.A., Blake, J.A., Botstein, D., Butler, H., Cherry, J.M., Davis, A.P., Dolinski, K., Dwight, S.S. et al. (2000) Gene ontology: Tool for the unification of biology. The Gene Ontology Consortium. Nat. Genet., 25, 25-29.
-
(2000)
Nat. Genet
, vol.25
, pp. 25-29
-
-
Ashburner, M.1
Ball, C.A.2
Blake, J.A.3
Botstein, D.4
Butler, H.5
Cherry, J.M.6
Davis, A.P.7
Dolinski, K.8
Dwight, S.S.9
-
24
-
-
0042672578
-
Scoring and identifying organism-specific functional patterns and putative phosphorylation sites in protein sequences using mutual information
-
Weekwerth, W. and Selbig, J. (2003) Scoring and identifying organism-specific functional patterns and putative phosphorylation sites in protein sequences using mutual information. Biochem. Bioph. Res. Co., 307, 516-521.
-
(2003)
Biochem. Bioph. Res. Co
, vol.307
, pp. 516-521
-
-
Weekwerth, W.1
Selbig, J.2
-
25
-
-
0001677717
-
Controlling the false discovery rate: A practical and powerful approach to multiple testing
-
Benjamini, Y. and Hochberg, Y. (1995) Controlling the false discovery rate: A practical and powerful approach to multiple testing. J. Roy. Stat. Soc. B, 57, 289-300.
-
(1995)
J. Roy. Stat. Soc. B
, vol.57
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
|