Stable isotope-free relative and absolute quantitation of protein phosphorylation stoichiometry by MS

Proceedings of the National Academy of Sciences of the United States of America

Volumn 102, Issue 11, 2005, Pages 3948-3953

  Steen, Hanno ^a   Jebanathirajah, Judith A ^a   Springer, Michael ^a   Kirschner, Marc W ^a  

^a HARVARD MEDICAL SCHOOL   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

PHOSPHOPEPTIDE; PROTEINASE; STABLE ISOTOPE; TRANSCRIPTION FACTOR;

ARTICLE; ION CURRENT; IONIZATION; MASS SPECTROMETRY; MATHEMATICAL ANALYSIS; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN DEGRADATION; PROTEIN DEPHOSPHORYLATION; PROTEIN MODIFICATION; PROTEIN PHOSPHORYLATION; PROTEIN VARIANT; QUALITATIVE ANALYSIS; QUANTITATIVE ANALYSIS; SIGNAL TRANSDUCTION; STOICHIOMETRY; TRANSCRIPTION INITIATION; YEAST;

CHEMISTRY, ANALYTICAL; DNA-BINDING PROTEINS; MASS SPECTROMETRY; PEPTIDE FRAGMENTS; PHOSPHORYLATION; PROTEINS; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS; TIME FACTORS; TRANSCRIPTION FACTORS;

EID: 15344341157     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.0409536102     Document Type: Article

References (27)

1. Yan, J., Packer, N., Gooley, A. & Williams, K. (1998) J. Chromatogr. 808, 23-41.
2. Hunter, T. (1998) Philos. Trans. R. Soc. London B 353, 583-605.
3. Campbell, D. & Morrice, N. (2002) J. Biomol. Tech. 13, 119-130.
4. Posewitz, M. C. & Tempst, P. (1999) Anal. Chem. 71, 2883-2892.
5. Nuhse, T. S., Stensballe, A., Jensen, O. N. & Peck, S. C. (2003) Mol. Cell Proteomics 2, 1234-1243.
6. Beausoleil, S. A., Jedrychowski, M., Schwartz, D., Elias, J. E., Villen, J., Li, J., Cohn, M. A., Cantley, L. C. & Gygi, S. P. (2004) Proc. Natl. Acad. Sci. USA 101, 12130-12135.
7. Carr, S. A., Huddleston, M. J. & Annan, R. S. (1996) Anal. Biochem. 239, 180-192.
8. Neubauer, G. & Mann, M. (1997) J. Mass Spectrom. 32, 94-98.
9. Steen, H., Kuster, B., Fernandez, M., Pandey, A. & Mann, M. (2001) Anal. Chem. 73, 1440-1448.
10. Oda, Y., Huang, K., Cross, F. R., Cowburn, D. & Chait, B. T. (1999) Proc. Natl. Acad. Sci. USA 96, 6591-6596.
11. Ibarrola, N., Kalume, D. E., Gronborg, N., Iwahori, A. & Pandey, A. (2003) Anal. Chem. 75, 6043-6049.
12. Bonenfant, D., Schmelzle, T., Jacinto, E., Crespo, J. L., Mini, T., Hall, M. N. & Jenoe, P. (2003) Proc. Natl. Acad. Sci. USA 100, 880-885.
13. Weckwerth, W., Willmitzer, L. & Fiehn, O. (2000) Rapid Commun. Mass Spectrom. 14, 1677-1681.
14. Goshe, M. B., Conrads, T. P., Panisko, E. A., Angell, N. H., Veenstra, T. D. & Smith, R. D. (2001) Anal. Chem. 73, 2578-2586.
15. Qian, W. J., Goshe, M. B., Camp, D. G., 2nd, Yu, L. R., Tang, K. & Smith, R. D. (2003) Anal. Chem. 75, 5441-5450.
16. Zhang, X., Jin, Q. K., Carr, S. A. & Annan, R. S. (2002) Rapid Commun. Mass Spectrom. 16, 2325-2332.
17. Hegeman, A. D., Harms, A. C., Sussman, M. R., Bunner, A. E. & Harper, J. F. (2004) J. Am. Soc. Mass Spectrom. 15, 647-653.
18. Gerber, S. A., Rush, J., Stemman, O., Kirschner, M. W. & Gygi, S. P. (2003) Proc. Natl. Acad. Sci. USA 100, 6940-6945.
19. Jeffery, D. A., Springer, M., King, D. S. & O'Shea, E. K. (2001) J. Mol. Biol. 306, 997-1010.
20. Shevchenko, A., Wilm, M., Vorm, O. & Mann, M. (1996) Anal. Chem. 68, 850-858.
21. Rappsilber, J., Ishihama, Y. & Mann, M. (2003) Anal. Chem. 75, 663-670.
22. Bondarenko, P. V., Chelius, D. & Shaler, T. A. (2002) Anal. Chem. 74, 4741-4749.
23. Wang, W., Zhou, H., Lin, H., Roy, S., Shaler, T. A., Hill, L. R., Norton, S., Kumar, P., Anderle, M. & Becker, C. H. (2003) Anal. Chem. 75, 4818-4826.
24. Chelius, D., Zhang, T., Wang, G. & Shen, R. F. (2003) Anal. Chem. 75, 6658-6665.
25. Ruse, C. I., Willard, B., Jin, J. P., Haas, T., Kinter, M. & Bond, M. (2002) Anal. Chem. 74, 1658-1664.
26. Willard, B. B., Ruse, C. I., Keightley, J. A., Bond, M. & Kinter, M. (2003) Anal. Chem. 75, 2370-2376.
27. Andersen, J. S., Wilkinson, C. J., Mayor, T., Mortensen, P., Nigg, E. A. & Mann, M. (2003) Nature 426, 570-574.