Microbial Forensics: Predicting Phenotypic Characteristics and Environmental Conditions from Large-Scale Gene Expression Profiles

PLoS Computational Biology

Volumn 11, Issue 3, 2015, Pages

  Kim, Minseung ^a,b   Zorraquino, Violeta ^b   Tagkopoulos, Ilias ^a,b  

^a University of California   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ESCHERICHIA COLI; GENE ONTOLOGY; ITERATIVE METHODS;

CELLULAR PHYSIOLOGY; CELLULAR STATE; CONDITION; ENVIRONMENTAL CHARACTERISTIC; ENVIRONMENTAL CONDITIONS; GENE EXPRESSION PROFILES; GENES EXPRESSION; INFORMATION CONTENTS; LARGE-SCALES; PERFORMANCE;

GENE EXPRESSION;

AMPICILLIN; GLUCOSE; GLYCEROL; LACTIC ACID; NORFLOXACIN; OXYGEN; TRANSCRIPTOME; BIOLOGICAL MARKER;

ARTICLE; BACTERIAL GENE; BACTERIAL GROWTH; BACTERIAL STRAIN; BACTERIAL STRUCTURES; BAYESIAN LEARNING; CARBON SOURCE; CLASSIFICATION; CLASSIFIER; COMPUTER ANALYSIS; COMPUTER PREDICTION; CONTROLLED STUDY; DECISION TREE; ESCHERICHIA COLI; EXPERIMENTATION; GENE EXPRESSION; GENE EXPRESSION PROFILING; GENE FUNCTION; GENE ONTOLOGY; GROWTH CURVE; K NEAREST NEIGHBOR; MICROBIOLOGY; NONHUMAN; PHENOTYPE; PREDICTION; RNA SEQUENCE; SUPPORT VECTOR MACHINE; TRANSCRIPTOMICS; ALGORITHM; AREA UNDER THE CURVE; ENVIRONMENT; FORENSIC SCIENCE; GENETICS; METABOLISM; PHYSIOLOGY; PROCEDURES;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI;

ALGORITHMS; AREA UNDER CURVE; BIOMARKERS; ENVIRONMENT; ESCHERICHIA COLI; FORENSIC SCIENCES; GENE EXPRESSION PROFILING; METABOLIC NETWORKS AND PATHWAYS; PHENOTYPE;

EID: 84926315431     PISSN: 1553734X     EISSN: 15537358     Source Type: Journal    
DOI: 10.1371/journal.pcbi.1004127     Document Type: Article

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