-
1
-
-
84877801967
-
RNA decay machines: Deadenylation by the Ccr4-not and Pan2-Pan3 complexes
-
Wahle, E., and Winkler, G. S. (2013) RNA decay machines: deadenylation by the Ccr4-not and Pan2-Pan3 complexes. Biochim. Biophys. Acta. 1829, 561-570
-
(2013)
Biochim. Biophys. Acta.
, vol.1829
, pp. 561-570
-
-
Wahle, E.1
Winkler, G.S.2
-
2
-
-
84155195139
-
The Ccr4-Not complex
-
Collart, M. A., and Panasenko, O. O. (2012) The Ccr4-Not complex. Gene 492, 42-53
-
(2012)
Gene
, vol.492
, pp. 42-53
-
-
Collart, M.A.1
Panasenko, O.O.2
-
3
-
-
84862685172
-
Ccr4-Not complex: The control freak of eukaryotic cells
-
Miller, J. E., and Reese, J. C. (2012) Ccr4-Not complex: the control freak of eukaryotic cells. Crit. Rev. Biochem. Mol. Biol. 47, 315-333
-
(2012)
Crit. Rev. Biochem. Mol. Biol.
, vol.47
, pp. 315-333
-
-
Miller, J.E.1
Reese, J.C.2
-
4
-
-
84868094761
-
Architecture of the nuclease module of the yeast Ccr4-not complex: The Not1-Caf1-Ccr4 interaction
-
Basquin, J., Roudko, V. V., Rode, M., Basquin, C., Séraphin, B., and Conti, E. (2012) Architecture of the nuclease module of the yeast Ccr4-not complex: the Not1-Caf1-Ccr4 interaction. Mol. Cell 48, 207-218
-
(2012)
Mol. Cell
, vol.48
, pp. 207-218
-
-
Basquin, J.1
Roudko, V.V.2
Rode, M.3
Basquin, C.4
Séraphin, B.5
Conti, E.6
-
5
-
-
84870622730
-
The structural basis for the interaction between the CAF1 nuclease and the NOT1 scaffold of the human CCR4-NOT deadenylase complex
-
Petit, A. P., Wohlbold, L., Bawankar, P., Huntzinger, E., Schmidt, S., Izaurralde, E., and Weichenrieder, O. (2012) The structural basis for the interaction between the CAF1 nuclease and the NOT1 scaffold of the human CCR4-NOT deadenylase complex. Nucleic Acids Res. 40, 11058-11072
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. 11058-11072
-
-
Petit, A.P.1
Wohlbold, L.2
Bawankar, P.3
Huntzinger, E.4
Schmidt, S.5
Izaurralde, E.6
Weichenrieder, O.7
-
6
-
-
84863869059
-
RNA degradation in Saccharomyces cerevisae
-
Parker, R. (2012) RNA degradation in Saccharomyces cerevisae. Genetics 191, 671-702
-
(2012)
Genetics
, vol.191
, pp. 671-702
-
-
Parker, R.1
-
8
-
-
0037169544
-
Interaction between Not1p, a component of the Ccr4-not complex, a global regulator of transcription, and Dhh1p, a putative RNA helicase
-
Maillet, L., and Collart, M. A. (2002) Interaction between Not1p, a component of the Ccr4-not complex, a global regulator of transcription, and Dhh1p, a putative RNA helicase. J. Biol. Chem. 277, 2835-2842
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 2835-2842
-
-
Maillet, L.1
Collart, M.A.2
-
9
-
-
77956642517
-
Human Pat1b connects deadenylation with mRNA decapping and controls the assembly of processing bodies
-
Ozgur, S., Chekulaeva, M., and Stoecklin, G. (2010) Human Pat1b connects deadenylation with mRNA decapping and controls the assembly of processing bodies. Mol. Cell Biol. 30, 4308-4323
-
(2010)
Mol. Cell Biol.
, vol.30
, pp. 4308-4323
-
-
Ozgur, S.1
Chekulaeva, M.2
Stoecklin, G.3
-
10
-
-
77951199701
-
HPat provides a link between deadenylation and decapping in metazoa
-
Haas, G., Braun, J. E., Igreja, C., Tritschler, F., Nishihara, T., and Izaurralde, E. (2010) HPat provides a link between deadenylation and decapping in metazoa. J. Cell Biol. 189, 289-302
-
(2010)
J. Cell Biol.
, vol.189
, pp. 289-302
-
-
Haas, G.1
Braun, J.E.2
Igreja, C.3
Tritschler, F.4
Nishihara, T.5
Izaurralde, E.6
-
11
-
-
84901940130
-
Structural and biochemical insights to the role of the CCR4-NOT complex and DDX6 ATPase in microRNA repression
-
Mathys, H., Basquin, J., Ozgur, S., Czarnocki-Cieciura, M., Bonneau, F., Aartse, A., Dziembowski, A., Nowotny, M., Conti, E., and Filipowicz, W. (2014) Structural and biochemical insights to the role of the CCR4-NOT complex and DDX6 ATPase in microRNA repression. Mol. Cell 54, 751-765
-
(2014)
Mol. Cell
, vol.54
, pp. 751-765
-
-
Mathys, H.1
Basquin, J.2
Ozgur, S.3
Czarnocki-Cieciura, M.4
Bonneau, F.5
Aartse, A.6
Dziembowski, A.7
Nowotny, M.8
Conti, E.9
Filipowicz, W.10
-
12
-
-
84901911674
-
A DDX6-CNOT1 complex and W-binding pockets in CNOT9 reveal direct links between miRNA target recognition and silencing
-
Chen, Y., Boland, A., Kuzuoʇlu-Öztürk, D., Bawankar, P., Loh, B., Chang, C. T., Weichenrieder, O., and Izaurralde, E. (2014) A DDX6-CNOT1 complex and W-binding pockets in CNOT9 reveal direct links between miRNA target recognition and silencing. Mol. Cell 54, 737-750
-
(2014)
Mol. Cell
, vol.54
, pp. 737-750
-
-
Chen, Y.1
Boland, A.2
Kuzuoʇlu-Öztürk, D.3
Bawankar, P.4
Loh, B.5
Chang, C.T.6
Weichenrieder, O.7
Izaurralde, E.8
-
13
-
-
76049117054
-
DCP1 forms asymmetric trimers to assemble into active mRNA decapping complexes in metazoa
-
Tritschler, F., Braun, J. E., Motz, C., Igreja, C., Haas, G., Truffault, V., Izaurralde, E., and Weichenrieder, O. (2009) DCP1 forms asymmetric trimers to assemble into active mRNA decapping complexes in metazoa. Proc. Natl. Acad. Sci. U.S.A. 106, 21591-21596
-
(2009)
Proc. Natl. Acad. Sci. U.S.A.
, vol.106
, pp. 21591-21596
-
-
Tritschler, F.1
Braun, J.E.2
Motz, C.3
Igreja, C.4
Haas, G.5
Truffault, V.6
Izaurralde, E.7
Weichenrieder, O.8
-
14
-
-
55449123348
-
Similar modes of interaction enable Trailer Hitch and EDC3 to associate with DCP1 and Me31B in distinct protein complexes
-
Tritschler, F., Eulalio, A., Helms, S., Schmidt, S., Coles, M., Weichenrieder, O., Izaurralde, E., and Truffault, V. (2008) Similar modes of interaction enable Trailer Hitch and EDC3 to associate with DCP1 and Me31B in distinct protein complexes. Mol. Cell Biol. 28, 6695-6708
-
(2008)
Mol. Cell Biol.
, vol.28
, pp. 6695-6708
-
-
Tritschler, F.1
Eulalio, A.2
Helms, S.3
Schmidt, S.4
Coles, M.5
Weichenrieder, O.6
Izaurralde, E.7
Truffault, V.8
-
15
-
-
25144482816
-
General translational repression by activators of mRNA decapping
-
Coller, J., and Parker, R. (2005) General translational repression by activators of mRNA decapping. Cell 122, 875-886
-
(2005)
Cell
, vol.122
, pp. 875-886
-
-
Coller, J.1
Parker, R.2
-
16
-
-
0035671046
-
A conserved role of a DEAD box helicase in mRNA masking
-
Minshall, N., Thom, G., and Standart, N. (2001) A conserved role of a DEAD box helicase in mRNA masking. RNA 7, 1728-1742
-
(2001)
RNA
, vol.7
, pp. 1728-1742
-
-
Minshall, N.1
Thom, G.2
Standart, N.3
-
17
-
-
0034800019
-
Me31B silences translation of oocyte-localizing RNAs through the formation of cytoplasmic RNP complex during Drosophila oogenesis
-
Nakamura, A., Amikura, R., Hanyu, K., and Kobayashi, S. (2001) Me31B silences translation of oocyte-localizing RNAs through the formation of cytoplasmic RNP complex during Drosophila oogenesis. Development 128, 3233-3242
-
(2001)
Development
, vol.128
, pp. 3233-3242
-
-
Nakamura, A.1
Amikura, R.2
Hanyu, K.3
Kobayashi, S.4
-
18
-
-
0006895405
-
RNA turnover: The helicase story unwinds
-
Anderson, J. S., and Parker, R. (1996) RNA turnover: the helicase story unwinds. Curr. Biol. 6, 780-782
-
(1996)
Curr. Biol.
, vol.6
, pp. 780-782
-
-
Anderson, J.S.1
Parker, R.2
-
19
-
-
65649125183
-
Role of p54 RNA helicase activity and its C-terminal domain in translational repression, P-body localization and assembly
-
Minshall, N., Kress, M., Weil, D., and Standart, N. (2009) Role of p54 RNA helicase activity and its C-terminal domain in translational repression, P-body localization and assembly. Mol. Biol. Cell 20, 2464-2472
-
(2009)
Mol. Biol. Cell
, vol.20
, pp. 2464-2472
-
-
Minshall, N.1
Kress, M.2
Weil, D.3
Standart, N.4
-
20
-
-
77953629046
-
Regulation of mRNA translation and stability by microRNAs
-
Fabian, M. R., Sonenberg, N., and Filipowicz, W. (2010) Regulation of mRNA translation and stability by microRNAs. Annu. Rev. Biochem. 79, 351-379
-
(2010)
Annu. Rev. Biochem.
, vol.79
, pp. 351-379
-
-
Fabian, M.R.1
Sonenberg, N.2
Filipowicz, W.3
-
21
-
-
13944282215
-
Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs
-
Lim, L. P., Lau, N. C., Garrett-Engele, P., Grimson, A., Schelter, J. M., Castle, J., Bartel, D. P., Linsley, P. S., and Johnson, J. M. (2005) Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs. Nature 433, 769-773
-
(2005)
Nature
, vol.433
, pp. 769-773
-
-
Lim, L.P.1
Lau, N.C.2
Garrett-Engele, P.3
Grimson, A.4
Schelter, J.M.5
Castle, J.6
Bartel, D.P.7
Linsley, P.S.8
Johnson, J.M.9
-
22
-
-
33645124258
-
Zebrafish MiR-430 promotes deadenylation and clearance of maternal mRNAs
-
Giraldez, A. J., Mishima, Y., Rihel, J., Grocock, R. J., Van Dongen, S., Inoue, K., Enright, A. J., and Schier, A. F. (2006) Zebrafish MiR-430 promotes deadenylation and clearance of maternal mRNAs. Science 312, 75-79
-
(2006)
Science
, vol.312
, pp. 75-79
-
-
Giraldez, A.J.1
Mishima, Y.2
Rihel, J.3
Grocock, R.J.4
Van Dongen, S.5
Inoue, K.6
Enright, A.J.7
Schier, A.F.8
-
23
-
-
33750619546
-
Differential regulation of germline mRNAs in soma and germ cells by zebrafish miR-430
-
Mishima, Y., Giraldez, A. J., Takeda, Y., Fujiwara, T., Sakamoto, H., Schier, A. F., and Inoue, K. (2006) Differential regulation of germline mRNAs in soma and germ cells by zebrafish miR-430. Curr. Biol. 16, 2135-2142
-
(2006)
Curr. Biol.
, vol.16
, pp. 2135-2142
-
-
Mishima, Y.1
Giraldez, A.J.2
Takeda, Y.3
Fujiwara, T.4
Sakamoto, H.5
Schier, A.F.6
Inoue, K.7
-
24
-
-
33645119514
-
MicroRNAs direct rapid deadenylation of mRNA
-
Wu, L., Fan, J., and Belasco, J. G. (2006) MicroRNAs direct rapid deadenylation of mRNA. Proc. Natl. Acad. Sci. U.S.A. 103, 4034-4039
-
(2006)
Proc. Natl. Acad. Sci. U.S.A.
, vol.103
, pp. 4034-4039
-
-
Wu, L.1
Fan, J.2
Belasco, J.G.3
-
25
-
-
33746055678
-
MRNA degradation by miRNAs and GW182 requires both CCR4:NOT deadenylase and DCP1:DCP2 decapping complexes
-
Behm-Ansmant, I., Rehwinkel, J., Doerks, T., Stark, A., Bork, P., and Izaurralde, E. (2006) mRNA degradation by miRNAs and GW182 requires both CCR4:NOT deadenylase and DCP1:DCP2 decapping complexes. Genes Dev. 20, 1885-1898
-
(2006)
Genes Dev.
, vol.20
, pp. 1885-1898
-
-
Behm-Ansmant, I.1
Rehwinkel, J.2
Doerks, T.3
Stark, A.4
Bork, P.5
Izaurralde, E.6
-
26
-
-
58149103297
-
Deadenylation is a widespread effect of miRNA regulation
-
Eulalio, A., Huntzinger, E., Nishihara, T., Rehwinkel, J., Fauser, M., and Izaurralde, E. (2009) Deadenylation is a widespread effect of miRNA regulation. RNA 15, 21-32
-
(2009)
RNA
, vol.15
, pp. 21-32
-
-
Eulalio, A.1
Huntzinger, E.2
Nishihara, T.3
Rehwinkel, J.4
Fauser, M.5
Izaurralde, E.6
-
27
-
-
78751477191
-
Gene silencing by microRNAs: Contributions of translational repression and mRNA decay
-
Huntzinger, E., and Izaurralde, E. (2011) Gene silencing by microRNAs: contributions of translational repression and mRNA decay. Nat. Rev. Genet. 12, 99-110
-
(2011)
Nat. Rev. Genet.
, vol.12
, pp. 99-110
-
-
Huntzinger, E.1
Izaurralde, E.2
-
28
-
-
25844442472
-
A crucial role for GW182 and the DCP1:DCP2 decapping complex in miRNA-mediated gene silencing
-
Rehwinkel, J., Behm-Ansmant, I., Gatfield, D., and Izaurralde, E. (2005) A crucial role for GW182 and the DCP1:DCP2 decapping complex in miRNA-mediated gene silencing. RNA 11, 1640-1647
-
(2005)
RNA
, vol.11
, pp. 1640-1647
-
-
Rehwinkel, J.1
Behm-Ansmant, I.2
Gatfield, D.3
Izaurralde, E.4
-
29
-
-
35348962568
-
Targetspecific requirements for enhancers of decapping in miRNA-mediated gene silencing
-
Eulalio, A., Rehwinkel, J., Stricker, M., Huntzinger, E., Yang, S. F., Doerks, T., Dorner, S., Bork, P., Boutros, M., and Izaurralde, E. (2007) Targetspecific requirements for enhancers of decapping in miRNA-mediated gene silencing. Genes Dev. 21, 2558-2570
-
(2007)
Genes Dev.
, vol.21
, pp. 2558-2570
-
-
Eulalio, A.1
Rehwinkel, J.2
Stricker, M.3
Huntzinger, E.4
Yang, S.F.5
Doerks, T.6
Dorner, S.7
Bork, P.8
Boutros, M.9
Izaurralde, E.10
-
30
-
-
84879414849
-
Argonaute proteins: Functional insights and emerging roles
-
Meister, G. (2013) Argonaute proteins: functional insights and emerging roles. Nat. Rev. Genet 14, 447-459
-
(2013)
Nat. Rev. Genet
, vol.14
, pp. 447-459
-
-
Meister, G.1
-
31
-
-
66449124170
-
A C-terminal silencing domain in GW182 is essential for miRNA function
-
Eulalio, A., Helms, S., Fritzsch, C., Fauser, M., and Izaurralde, E. (2009) A C-terminal silencing domain in GW182 is essential for miRNA function. RNA 15, 1067-1077
-
(2009)
RNA
, vol.15
, pp. 1067-1077
-
-
Eulalio, A.1
Helms, S.2
Fritzsch, C.3
Fauser, M.4
Izaurralde, E.5
-
32
-
-
34948851405
-
A conserved motif in Argonaute-interacting proteins mediates functional interactions through the Argonaute PIWI domain
-
Till, S., Lejeune, E., Thermann, R., Bortfeld, M., Hothorn, M., Enderle, D., Heinrich, C., Hentze, M. W., and Ladurner, A. G. (2007) A conserved motif in Argonaute-interacting proteins mediates functional interactions through the Argonaute PIWI domain. Nat. Struct. Mol. Biol. 14, 897-903
-
(2007)
Nat. Struct. Mol. Biol.
, vol.14
, pp. 897-903
-
-
Till, S.1
Lejeune, E.2
Thermann, R.3
Bortfeld, M.4
Hothorn, M.5
Enderle, D.6
Heinrich, C.7
Hentze, M.W.8
Ladurner, A.G.9
-
33
-
-
80555150587
-
MiRNA-mediated deadenylation is orchestrated by GW182 through two conserved motifs that interact with CCR4-NOT
-
Fabian, M. R., Cieplak, M. K., Frank, F., Morita, M., Green, J., Srikumar, T., Nagar, B., Yamamoto, T., Raught, B., Duchaine, T. F., and Sonenberg, N. (2011) miRNA-mediated deadenylation is orchestrated by GW182 through two conserved motifs that interact with CCR4-NOT. Nat. Struct. Mol. Biol. 18, 1211-1217
-
(2011)
Nat. Struct. Mol. Biol.
, vol.18
, pp. 1211-1217
-
-
Fabian, M.R.1
Cieplak, M.K.2
Frank, F.3
Morita, M.4
Green, J.5
Srikumar, T.6
Nagar, B.7
Yamamoto, T.8
Raught, B.9
Duchaine, T.F.10
Sonenberg, N.11
-
34
-
-
80555131046
-
MiRNA repression involves GW182-mediated recruitment ofCCR4-NOTthrough conserved W-containing motifs
-
Chekulaeva, M., Mathys, H., Zipprich, J. T., Attig, J., Colic, M., Parker, R., and Filipowicz, W. (2011) miRNA repression involves GW182-mediated recruitment ofCCR4-NOTthrough conserved W-containing motifs. Nat. Struct. Mol. Biol. 18, 1218-1226
-
(2011)
Nat. Struct. Mol. Biol.
, vol.18
, pp. 1218-1226
-
-
Chekulaeva, M.1
Mathys, H.2
Zipprich, J.T.3
Attig, J.4
Colic, M.5
Parker, R.6
Filipowicz, W.7
-
35
-
-
80053580757
-
GW182 proteins directly recruit cytoplasmic deadenylase complexes to miRNA targets
-
Braun, J. E., Huntzinger, E., Fauser, M., and Izaurralde, E. (2011) GW182 proteins directly recruit cytoplasmic deadenylase complexes to miRNA targets. Mol. Cell 44, 120-133
-
(2011)
Mol. Cell
, vol.44
, pp. 120-133
-
-
Braun, J.E.1
Huntzinger, E.2
Fauser, M.3
Izaurralde, E.4
-
36
-
-
84881497030
-
Structure of the PAN3 pseudokinase reveals the basis for interactions with the PAN2 deadenylase and the GW182 proteins
-
Christie, M., Boland, A., Huntzinger, E., Weichenrieder, O., and Izaurralde, E. (2013) Structure of the PAN3 pseudokinase reveals the basis for interactions with the PAN2 deadenylase and the GW182 proteins. Mol. Cell 51, 360-373
-
(2013)
Mol. Cell
, vol.51
, pp. 360-373
-
-
Christie, M.1
Boland, A.2
Huntzinger, E.3
Weichenrieder, O.4
Izaurralde, E.5
-
37
-
-
70349177026
-
Mammalian miRNA RISC recruits CAF1 and PABP to affect PABP-dependent deadenylation
-
Fabian, M. R., Mathonnet, G., Sundermeier, T., Mathys, H., Zipprich, J. T., Svitkin, Y. V., Rivas, F., Jinek, M., Wohlschlegel, J., Doudna, J. A., Chen, C. Y., Shyu, A. B., Yates, J. R., 3rd, Hannon, G. J., Filipowicz, W., Duchaine, T. F., and Sonenberg, N. (2009) Mammalian miRNA RISC recruits CAF1 and PABP to affect PABP-dependent deadenylation. Mol. Cell 35, 868-880
-
(2009)
Mol. Cell
, vol.35
, pp. 868-880
-
-
Fabian, M.R.1
Mathonnet, G.2
Sundermeier, T.3
Mathys, H.4
Zipprich, J.T.5
Svitkin, Y.V.6
Rivas, F.7
Jinek, M.8
Wohlschlegel, J.9
Doudna, J.A.10
Chen, C.Y.11
Shyu, A.B.12
Yates, J.R.13
Hannon, G.J.14
Filipowicz, W.15
Duchaine, T.F.16
Sonenberg, N.17
-
38
-
-
84885911691
-
MiRISC recruits decapping factors to miRNA targets to enhance their degradation
-
Nishihara, T., Zekri, L., Braun, J. E., and Izaurralde, E. (2013) miRISC recruits decapping factors to miRNA targets to enhance their degradation. Nucleic Acids Res. 41, 8692-8705
-
(2013)
Nucleic Acids Res.
, vol.41
, pp. 8692-8705
-
-
Nishihara, T.1
Zekri, L.2
Braun, J.E.3
Izaurralde, E.4
-
39
-
-
84871681585
-
MicroRNAs mediate gene silencing via multiple different pathways in drosophila
-
Fukaya, T., and Tomari, Y. (2012) MicroRNAs mediate gene silencing via multiple different pathways in drosophila. Mol. Cell 48, 825-836
-
(2012)
Mol. Cell
, vol.48
, pp. 825-836
-
-
Fukaya, T.1
Tomari, Y.2
-
40
-
-
84856375470
-
Translational inhibition by deadenylation-independent mechanisms is central to microRNA-mediated silencing in zebrafish
-
Mishima, Y., Fukao, A., Kishimoto, T., Sakamoto, H., Fujiwara, T., and Inoue, K. (2012) Translational inhibition by deadenylation-independent mechanisms is central to microRNA-mediated silencing in zebrafish. Proc. Natl. Acad. Sci. U.S.A. 109, 1104-1109
-
(2012)
Proc. Natl. Acad. Sci. U.S.A.
, vol.109
, pp. 1104-1109
-
-
Mishima, Y.1
Fukao, A.2
Kishimoto, T.3
Sakamoto, H.4
Fujiwara, T.5
Inoue, K.6
-
41
-
-
83555161676
-
PABP is not essential for microRNAmediated translational repression and deadenylation in vitro
-
Fukaya, T., and Tomari, Y. (2011) PABP is not essential for microRNAmediated translational repression and deadenylation in vitro. EMBO. J. 30, 4998-5009
-
(2011)
EMBO. J.
, vol.30
, pp. 4998-5009
-
-
Fukaya, T.1
Tomari, Y.2
-
42
-
-
84874586399
-
NOT10 and C2orf29/NOT11 form a conserved module of the CCR4- NOT complex that docks onto the NOT1 N-terminal domain
-
Bawankar, P., Loh, B., Wohlbold, L., Schmidt, S., and Izaurralde, E. (2013) NOT10 and C2orf29/NOT11 form a conserved module of the CCR4- NOT complex that docks onto the NOT1 N-terminal domain. RNA. Biol. 10, 228-244
-
(2013)
RNA. Biol.
, vol.10
, pp. 228-244
-
-
Bawankar, P.1
Loh, B.2
Wohlbold, L.3
Schmidt, S.4
Izaurralde, E.5
-
43
-
-
84906874947
-
Human DDX6 effects miRNA-mediated gene silencing via direct binding to CNOT1
-
Rouya, C., Siddiqui, N., Morita, M., Duchaine, T. F., Fabian, M. R., and Sonenberg, N. (2014) Human DDX6 effects miRNA-mediated gene silencing via direct binding to CNOT1. RNA 20, 1398-1409
-
(2014)
RNA
, vol.20
, pp. 1398-1409
-
-
Rouya, C.1
Siddiqui, N.2
Morita, M.3
Duchaine, T.F.4
Fabian, M.R.5
Sonenberg, N.6
-
44
-
-
33846954393
-
PUF protein-mediated deadenylation is catalyzed by Ccr4p
-
Goldstrohm, A. C., Seay, D. J., Hook, B. A., and Wickens, M. (2007) PUF protein-mediated deadenylation is catalyzed by Ccr4p. J. Biol. Chem. 282, 109-114
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 109-114
-
-
Goldstrohm, A.C.1
Seay, D.J.2
Hook, B.A.3
Wickens, M.4
-
45
-
-
33744946810
-
PUF proteins bind Pop2p to regulate messenger RNAs
-
Goldstrohm, A. C., Hook, B. A., Seay, D. J., and Wickens, M. (2006) PUF proteins bind Pop2p to regulate messenger RNAs. Nat. Struct. Mol. Biol. 13, 533-539
-
(2006)
Nat. Struct. Mol. Biol.
, vol.13
, pp. 533-539
-
-
Goldstrohm, A.C.1
Hook, B.A.2
Seay, D.J.3
Wickens, M.4
-
46
-
-
70350510820
-
RNAi in budding yeast
-
Drinnenberg, I. A., Weinberg, D. E., Xie, K. T., Mower, J. P., Wolfe, K. H., Fink, G. R., and Bartel, D. P. (2009) RNAi in budding yeast. Science 326, 544-550
-
(2009)
Science
, vol.326
, pp. 544-550
-
-
Drinnenberg, I.A.1
Weinberg, D.E.2
Xie, K.T.3
Mower, J.P.4
Wolfe, K.H.5
Fink, G.R.6
Bartel, D.P.7
-
47
-
-
79954616114
-
Reconstitution of human RNA interference in budding yeast
-
Suk, K., Choi, J., Suzuki, Y., Ozturk, S. B., Mellor, J. C., Wong, K. H., MacKay, J. L., Gregory, R. I., and Roth, F. P. (2011) Reconstitution of human RNA interference in budding yeast. Nucleic Acids Res. 39, e43
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. e43
-
-
Suk, K.1
Choi, J.2
Suzuki, Y.3
Ozturk, S.B.4
Mellor, J.C.5
Wong, K.H.6
Mackay, J.L.7
Gregory, R.I.8
Roth, F.P.9
-
48
-
-
18444393975
-
Translation of aberrant mRNAs lacking a termination codon or with a shortened 3′-UTR is repressed after initiation in yeast
-
Inada, T., and Aiba, H. (2005) Translation of aberrant mRNAs lacking a termination codon or with a shortened 3′-UTR is repressed after initiation in yeast. EMBO J. 24, 1584-1595
-
(2005)
EMBO J.
, vol.24
, pp. 1584-1595
-
-
Inada, T.1
Aiba, H.2
-
49
-
-
77958607457
-
Tethering of poly(A)-binding protein interferes with non-translated mRNA decay from the 5′ end in yeast
-
Tsuboi, T., and Inada, T. (2010) Tethering of poly(A)-binding protein interferes with non-translated mRNA decay from the 5′ end in yeast. J. Biol. Chem. 285, 33589-33601
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 33589-33601
-
-
Tsuboi, T.1
Inada, T.2
-
50
-
-
0028586017
-
Regulatable promoters of Saccharomyces cerevisiae: Comparison of transcriptional activity and their use for heterologous expression
-
Mumberg, D., Müller, R., and Funk, M. (1994) Regulatable promoters of Saccharomyces cerevisiae: comparison of transcriptional activity and their use for heterologous expression. Nucleic Acids Res. 22, 5767-5768
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 5767-5768
-
-
Mumberg, D.1
Müller, R.2
Funk, M.3
-
51
-
-
65249161794
-
Multiple independent domains of dGW182 function in miRNA-mediated repression in Drosophila
-
Chekulaeva, M., Filipowicz, W., and Parker, R. (2009) Multiple independent domains of dGW182 function in miRNA-mediated repression in Drosophila. RNA 15, 794-803
-
(2009)
RNA
, vol.15
, pp. 794-803
-
-
Chekulaeva, M.1
Filipowicz, W.2
Parker, R.3
-
52
-
-
84862778053
-
Ribosome profiling shows that miR-430 reduces translation before causing mRNA decay in zebrafish
-
Bazzini, A. A., Lee, M. T., and Giraldez, A. J. (2012) Ribosome profiling shows that miR-430 reduces translation before causing mRNA decay in zebrafish. Science 336, 233-237
-
(2012)
Science
, vol.336
, pp. 233-237
-
-
Bazzini, A.A.1
Lee, M.T.2
Giraldez, A.J.3
-
53
-
-
66849122924
-
Decapping is preceded by 3′ uridylation in a novel pathway of bulk mRNA turnover
-
Rissland, O. S., and Norbury, C. J. (2009) Decapping is preceded by 3′ uridylation in a novel pathway of bulk mRNA turnover. Nat. Struct. Mol. Biol. 16, 616-623
-
(2009)
Nat. Struct. Mol. Biol.
, vol.16
, pp. 616-623
-
-
Rissland, O.S.1
Norbury, C.J.2
-
54
-
-
84870790194
-
A direct interaction between DCP1 and XRN1 couples mRNA decapping to 5′ exonucleolytic degradation
-
Braun, J. E., Truffault, V., Boland, A., Huntzinger, E., Chang, C. T., Haas, G., Weichenrieder, O., Coles, M., and Izaurralde, E. (2012) A direct interaction between DCP1 and XRN1 couples mRNA decapping to 5′ exonucleolytic degradation. Nat. Struct. Mol. Biol. 19, 1324-1331
-
(2012)
Nat. Struct. Mol. Biol.
, vol.19
, pp. 1324-1331
-
-
Braun, J.E.1
Truffault, V.2
Boland, A.3
Huntzinger, E.4
Chang, C.T.5
Haas, G.6
Weichenrieder, O.7
Coles, M.8
Izaurralde, E.9
-
55
-
-
80051555960
-
Zebrafish mRNA sequencing deciphers novelties in transcriptome dynamics during maternal to zygotic transition
-
Aanes, H., Winata, C. L., Lin, C. H., Chen, J. P., Srinivasan, K. G., Lee, S. G., Lim, A. Y., Hajan, H. S., Collas, P., Bourque, G., Gong, Z., Korzh, V., Aleström, P., and Mathavan, S. (2011) Zebrafish mRNA sequencing deciphers novelties in transcriptome dynamics during maternal to zygotic transition. Genome Res. 21, 1328-1338
-
(2011)
Genome Res.
, vol.21
, pp. 1328-1338
-
-
Aanes, H.1
Winata, C.L.2
Lin, C.H.3
Chen, J.P.4
Srinivasan, K.G.5
Lee, S.G.6
Lim, A.Y.7
Hajan, H.S.8
Collas, P.9
Bourque, G.10
Gong, Z.11
Korzh, V.12
Aleström, P.13
Mathavan, S.14
-
56
-
-
0037121926
-
Human Dcp2: A catalytically active mRNA decapping enzyme located in specific cytoplasmic structures
-
van Dijk, E., Cougot, N., Meyer, S., Babajko, S., Wahle, E., and Séraphin, B. (2002) Human Dcp2: a catalytically active mRNA decapping enzyme located in specific cytoplasmic structures. EMBO. J. 21, 6915-6924
-
(2002)
EMBO. J.
, vol.21
, pp. 6915-6924
-
-
Van Dijk, E.1
Cougot, N.2
Meyer, S.3
Babajko, S.4
Wahle, E.5
Séraphin, B.6
-
57
-
-
85011942152
-
The decapping activator HPat a novel factor co-purifying with GW182 from Drosophila cells
-
Jäger, E., and Dorner, S. (2010) The decapping activator HPat a novel factor co-purifying with GW182 from Drosophila cells. RNA Biol. 7, 381-385
-
(2010)
RNA Biol.
, vol.7
, pp. 381-385
-
-
Jäger, E.1
Dorner, S.2
-
58
-
-
84890699455
-
HPat a decapping activator interacting with the miRNA effector complex
-
Barišić-Jäger, E., Krecioch, I., Hosiner, S., Antic, S., and Dorner, S. (2013) HPat a decapping activator interacting with the miRNA effector complex. PLoS One 8, e71860
-
(2013)
PLoS One
, vol.8
, pp. e71860
-
-
Barišić-Jäger, E.1
Krecioch, I.2
Hosiner, S.3
Antic, S.4
Dorner, S.5
-
59
-
-
33745894330
-
Translation repression in human cells by microRNA-induced gene silencing requires RCK/p54
-
Chu, C. Y., and Rana, T. M. (2006) Translation repression in human cells by microRNA-induced gene silencing requires RCK/p54. PLoS Biol. 4, e210
-
(2006)
PLoS Biol.
, vol.4
, pp. e210
-
-
Chu, C.Y.1
Rana, T.M.2
-
60
-
-
70350780068
-
Ago-TNRC6 triggers microRNA-mediated decay by promoting two deadenylation steps
-
Chen, C. Y., Zheng, D., Xia, Z., and Shyu, A. B. (2009) Ago-TNRC6 triggers microRNA-mediated decay by promoting two deadenylation steps. Nat. Struct. Mol. Biol. 16, 1160-1166
-
(2009)
Nat. Struct. Mol. Biol.
, vol.16
, pp. 1160-1166
-
-
Chen, C.Y.1
Zheng, D.2
Xia, Z.3
Shyu, A.B.4
-
61
-
-
70349189317
-
Drosophila miR2 primarily targets the m7GpppN cap structure for translational repression
-
Zdanowicz, A., Thermann, R., Kowalska, J., Jemielity, J., Duncan, K., Preiss, T., Darzynkiewicz, E., and Hentze, M. W. (2009) Drosophila miR2 primarily targets the m7GpppN cap structure for translational repression. Mol. Cell 35, 881-888
-
(2009)
Mol. Cell
, vol.35
, pp. 881-888
-
-
Zdanowicz, A.1
Thermann, R.2
Kowalska, J.3
Jemielity, J.4
Duncan, K.5
Preiss, T.6
Darzynkiewicz, E.7
Hentze, M.W.8
-
62
-
-
34249282243
-
Drosophila miR2 induces pseudo- polysomes and inhibits translation initiation
-
Thermann, R., and Hentze, M. W. (2007) Drosophila miR2 induces pseudo- polysomes and inhibits translation initiation. Nature 447, 875-878
-
(2007)
Nature
, vol.447
, pp. 875-878
-
-
Thermann, R.1
Hentze, M.W.2
-
63
-
-
34547944309
-
MicroRNA inhibition of translation initiation in vitro by targeting the cap-binding complex eIF4F
-
Mathonnet, G., Fabian, M. R., Svitkin, Y. V., Parsyan, A., Huck, L., Murata, T., Biffo, S., Merrick, W. C., Darzynkiewicz, E., Pillai, R. S., Filipowicz, W., Duchaine, T. F., and Sonenberg, N. (2007) MicroRNA inhibition of translation initiation in vitro by targeting the cap-binding complex eIF4F. Science 317, 1764-1767
-
(2007)
Science
, vol.317
, pp. 1764-1767
-
-
Mathonnet, G.1
Fabian, M.R.2
Svitkin, Y.V.3
Parsyan, A.4
Huck, L.5
Murata, T.6
Biffo, S.7
Merrick, W.C.8
Darzynkiewicz, E.9
Pillai, R.S.10
Filipowicz, W.11
Duchaine, T.F.12
Sonenberg, N.13
-
64
-
-
84876318702
-
Translational repression and eIF4A2 activity are critical for microRNA-mediated gene regulation
-
Meijer, H. A., Kong, Y. W., Lu, W. T., Wilczynska, A., Spriggs, R. V., Robinson, S. W., Godfrey, J. D., Willis, A. E., and Bushell, M. (2013) Translational repression and eIF4A2 activity are critical for microRNA-mediated gene regulation. Science 340, 82-85
-
(2013)
Science
, vol.340
, pp. 82-85
-
-
Meijer, H.A.1
Kong, Y.W.2
Lu, W.T.3
Wilczynska, A.4
Spriggs, R.V.5
Robinson, S.W.6
Godfrey, J.D.7
Willis, A.E.8
Bushell, M.9
-
65
-
-
84922394977
-
MicroRNAs trigger dissociation of eIF4AI and eIF4AII from target mRNAs in humans
-
Fukao, A., Mishima, Y., Takizawa, N., Oka, S., Imataka, H., Pelletier, J., Sonenberg, N., Thoma, C., and Fujiwara, T. (2014) MicroRNAs trigger dissociation of eIF4AI and eIF4AII from target mRNAs in humans. Mol. Cell 56, 79-89
-
(2014)
Mol. Cell
, vol.56
, pp. 79-89
-
-
Fukao, A.1
Mishima, Y.2
Takizawa, N.3
Oka, S.4
Imataka, H.5
Pelletier, J.6
Sonenberg, N.7
Thoma, C.8
Fujiwara, T.9
-
66
-
-
84922394010
-
MicroRNAs block assembly of eIF4F translation initiation complex in Drosophila
-
Fukaya, T., Iwakawa, H. O., and Tomari, Y. (2014) MicroRNAs block assembly of eIF4F translation initiation complex in Drosophila. Mol. Cell 56, 67-78
-
(2014)
Mol. Cell
, vol.56
, pp. 67-78
-
-
Fukaya, T.1
Iwakawa, H.O.2
Tomari, Y.3
-
67
-
-
70449108123
-
Upf1 stimulates degradation of the product derived from aberrant messenger RNA containing a specific nonsense mutation by the proteasome
-
Kuroha, K., Tatematsu, T., and Inada, T. (2009) Upf1 stimulates degradation of the product derived from aberrant messenger RNA containing a specific nonsense mutation by the proteasome. EMBO Rep. 10, 1265-1271
-
(2009)
EMBO Rep.
, vol.10
, pp. 1265-1271
-
-
Kuroha, K.1
Tatematsu, T.2
Inada, T.3
|