-
1
-
-
0004228157
-
-
ASM Press, Washington, DC.
-
Friedberg, E. C., Walker, G. C., Siede, W., Wood, R. D., Schultz, R. A., and Ellenberger, T. (2005) DNA Repair and Mutagenesis, 2 nd ed., ASM Press, Washington, DC.
-
(2005)
DNA Repair and Mutagenesis, 2nd Ed.
-
-
Friedberg, E.C.1
Walker, G.C.2
Siede, W.3
Wood, R.D.4
Schultz, R.A.5
Ellenberger, T.6
-
2
-
-
58249109379
-
DNA damage tolerance: When it's OK to make mistakes
-
Chang, D. J. and Cimprich, K. A. (2009) DNA damage tolerance: When it's OK to make mistakes Nat. Chem. Biol. 5, 82 - 90
-
(2009)
Nat. Chem. Biol.
, vol.5
, pp. 82-90
-
-
Chang, D.J.1
Cimprich, K.A.2
-
3
-
-
36248966246
-
RNF8 Ubiquitylates Histones at DNA Double-Strand Breaks and Promotes Assembly of Repair Proteins
-
Mailand, N., Bekker-Jensen, S., Faustrup, H., Melander, F., Bartek, J., Lukas, C., and Lukas, J. (2007) RNF8 Ubiquitylates Histones at DNA Double-Strand Breaks and Promotes Assembly of Repair Proteins Cell 131, 887 - 900
-
(2007)
Cell
, vol.131
, pp. 887-900
-
-
Mailand, N.1
Bekker-Jensen, S.2
Faustrup, H.3
Melander, F.4
Bartek, J.5
Lukas, C.6
Lukas, J.7
-
4
-
-
41149094512
-
Regulation of DNA repair throughout the cell cycle
-
Branzei, D. and Foiani, M. (2008) Regulation of DNA repair throughout the cell cycle Nat. Rev. Mol. Cell Biol. 9, 297 - 308
-
(2008)
Nat. Rev. Mol. Cell Biol.
, vol.9
, pp. 297-08
-
-
Branzei, D.1
Foiani, M.2
-
5
-
-
63849131910
-
Eukaryotic Translesion Polymerases and Their Roles and Regulation in DNA Damage Tolerance
-
Waters, L. S., Minesinger, B. K., Wiltrout, M. E., D'Souza, S., Woodruff, R. V., and Walker, G. C. (2009) Eukaryotic Translesion Polymerases and Their Roles and Regulation in DNA Damage Tolerance Microbiol. Mol. Biol. Rev. 73, 134 - 154
-
(2009)
Microbiol. Mol. Biol. Rev.
, vol.73
, pp. 134-154
-
-
Waters, L.S.1
Minesinger, B.K.2
Wiltrout, M.E.3
D'Souza, S.4
Woodruff, R.V.5
Walker, G.C.6
-
6
-
-
0037068455
-
RAD6-dependent DNA repair is linked to modification of PCNA by ubiquitin and SUMO
-
Hoege, C., Pfander, B., Moldovan, G.-L., Pyrowolakis, G., and Jentsch, S. (2002) RAD6-dependent DNA repair is linked to modification of PCNA by ubiquitin and SUMO Nature 419, 135 - 141
-
(2002)
Nature
, vol.419
, pp. 135-141
-
-
Hoege, C.1
Pfander, B.2
Moldovan, G.-L.3
Pyrowolakis, G.4
Jentsch, S.5
-
7
-
-
36749022214
-
The DNA Damage Response: Ten Years after
-
Harper, J. W. and Elledge, S. J. (2007) The DNA Damage Response: Ten Years After Mol. Cell 28, 739 - 745
-
(2007)
Mol. Cell
, vol.28
, pp. 739-745
-
-
Harper, J.W.1
Elledge, S.J.2
-
8
-
-
78649336706
-
The DNA Damage Response: Making It Safe to Play with Knives
-
Ciccia, A. and Elledge, S. J. (2010) The DNA Damage Response: Making It Safe to Play with Knives Mol. Cell 40, 179 - 204
-
(2010)
Mol. Cell
, vol.40
, pp. 179-204
-
-
Ciccia, A.1
Elledge, S.J.2
-
9
-
-
8844237615
-
Polyubiquitin chains: Polymeric protein signals
-
Pickart, C. M. and Fushman, D. (2004) Polyubiquitin chains: Polymeric protein signals Curr. Opin. Chem. Biol. 8, 610 - 616
-
(2004)
Curr. Opin. Chem. Biol.
, vol.8
, pp. 610-616
-
-
Pickart, C.M.1
Fushman, D.2
-
10
-
-
63649144413
-
Principles of ubiquitin and SUMO modifications in DNA repair
-
Bergink, S. and Jentsch, S. (2009) Principles of ubiquitin and SUMO modifications in DNA repair Nature 458, 461 - 467
-
(2009)
Nature
, vol.458
, pp. 461-467
-
-
Bergink, S.1
Jentsch, S.2
-
11
-
-
67349168142
-
RAD18 transmits DNA damage signalling to elicit homologous recombination repair
-
Huang, J., Huen, M. S. Y., Kim, H., Leung, C. C. Y., Glover, J. N. M., Yu, X., and Chen, J. (2009) RAD18 transmits DNA damage signalling to elicit homologous recombination repair Nat. Cell Biol. 11, 592 - 603
-
(2009)
Nat. Cell Biol.
, vol.11
, pp. 592-603
-
-
Huang, J.1
Huen, M.S.Y.2
Kim, H.3
Leung, C.C.Y.4
Glover, J.N.M.5
Yu, X.6
Chen, J.7
-
12
-
-
78649492271
-
The ubiquitous role of ubiquitin in the DNA damage response
-
Al-Hakim, A., Escribano-Diaz, C., Landry, M.-C., O'Donnell, L., Panier, S., Szilard, R. K., and Durocher, D. (2010) The ubiquitous role of ubiquitin in the DNA damage response DNA Repair 9, 1229 - 1240
-
(2010)
DNA Repair
, vol.9
, pp. 1229-1240
-
-
Al-Hakim, A.1
Escribano-Diaz, C.2
Landry, M.-C.3
O'Donnell, L.4
Panier, S.5
Szilard, R.K.6
Durocher, D.7
-
13
-
-
33646196532
-
Regulation of DNA repair by ubiquitylation
-
Huang, T. T. and D'Andrea, A. D. (2006) Regulation of DNA repair by ubiquitylation Nat. Rev. Mol. Cell Biol. 7, 323 - 334
-
(2006)
Nat. Rev. Mol. Cell Biol.
, vol.7
, pp. 323-334
-
-
Huang, T.T.1
D'Andrea, A.D.2
-
14
-
-
63049096813
-
Ubiquitin-binding domains and their role in the DNA damage response
-
Hofmann, K. (2009) Ubiquitin-binding domains and their role in the DNA damage response DNA Repair 8, 544 - 556
-
(2009)
DNA Repair
, vol.8
, pp. 544-556
-
-
Hofmann, K.1
-
15
-
-
84857411787
-
Y-family DNA polymerases and their role in tolerance of cellular DNA damage
-
Sale, J. E., Lehmann, A. R., and Woodgate, R. (2012) Y-family DNA polymerases and their role in tolerance of cellular DNA damage Nat. Rev. Mol. Cell Biol. 13, 141 - 152
-
(2012)
Nat. Rev. Mol. Cell Biol.
, vol.13
, pp. 141-152
-
-
Sale, J.E.1
Lehmann, A.R.2
Woodgate, R.3
-
16
-
-
67650429924
-
Y-family DNA polymerases in mammalian cells
-
Guo, C., Kosarek-Stancel, J. N., Tang, T.-S., and Friedberg, E. (2009) Y-family DNA polymerases in mammalian cells Cell. Mol. Life Sci. 66, 2363 - 2381
-
(2009)
Cell. Mol. Life Sci.
, vol.66
, pp. 2363-2381
-
-
Guo, C.1
Kosarek-Stancel, J.N.2
Tang, T.-S.3
Friedberg, E.4
-
17
-
-
0035997344
-
Error-prone Repair DNA Polymerases in Prokaryotes and Eukaryotes
-
Goodman, M. F. (2002) Error-prone Repair DNA Polymerases in Prokaryotes and Eukaryotes Annu. Rev. Biochem. 71, 17 - 50
-
(2002)
Annu. Rev. Biochem.
, vol.71
, pp. 17-50
-
-
Goodman, M.F.1
-
18
-
-
21244506437
-
Eukaryotic Translesion Synthesis DNA Polymermases: Specificity of Structure and Function
-
Prakash, S., Johnson, R. E., and Prakash, L. (2005) Eukaryotic Translesion Synthesis DNA Polymermases: Specificity of Structure and Function Annu. Rev. Biochem. 74, 317 - 353
-
(2005)
Annu. Rev. Biochem.
, vol.74
, pp. 317-353
-
-
Prakash, S.1
Johnson, R.E.2
Prakash, L.3
-
19
-
-
34249941966
-
Translesion synthesis: Y-family polymerases and the polymerase switch
-
Lehmann, A. R., Niimi, A., Ogi, T., Brown, S., Sabbioneda, S., Wing, J. F., Kannouche, P. L., and Green, C. M. (2007) Translesion synthesis: Y-family polymerases and the polymerase switch DNA Repair 6, 891 - 899
-
(2007)
DNA Repair
, vol.6
, pp. 891-899
-
-
Lehmann, A.R.1
Niimi, A.2
Ogi, T.3
Brown, S.4
Sabbioneda, S.5
Wing, J.F.6
Kannouche, P.L.7
Green, C.M.8
-
20
-
-
0034847259
-
Structure of the Catalytic Core of S. cerevisiae DNA Polymerase η: Implications for Translesion DNA Synthesis
-
Trincao, J., Johnson, R. E., Escalante, C. R., Prakash, S., Prakash, L., and Aggarwal, A. K. (2001) Structure of the Catalytic Core of S. cerevisiae DNA Polymerase η: Implications for Translesion DNA Synthesis Mol. Cell 8, 417 - 426
-
(2001)
Mol. Cell
, vol.8
, pp. 417-426
-
-
Trincao, J.1
Johnson, R.E.2
Escalante, C.R.3
Prakash, S.4
Prakash, L.5
Aggarwal, A.K.6
-
21
-
-
2342419732
-
DNA Replication Fidelity
-
Kunkel, T. A. (2004) DNA Replication Fidelity J. Biol. Chem. 279, 16895 - 16898
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 16895-16898
-
-
Kunkel, T.A.1
-
22
-
-
0033899540
-
The Saccharomyces cerevisiae RAD6 Group Is Composed of an Error-Prone and Two Error-Free Postreplication Repair Pathways
-
Xiao, W., Chow, B. L., Broomfield, S., and Hanna, M. (2000) The Saccharomyces cerevisiae RAD6 Group Is Composed of an Error-Prone and Two Error-Free Postreplication Repair Pathways Genetics 155, 1633 - 1641
-
(2000)
Genetics
, vol.155
, pp. 1633-1641
-
-
Xiao, W.1
Chow, B.L.2
Broomfield, S.3
Hanna, M.4
-
23
-
-
34249066085
-
PCNA, the Maestro of the Replication Fork
-
Moldovan, G.-L., Pfander, B., and Jentsch, S. (2007) PCNA, the Maestro of the Replication Fork Cell 129, 665 - 679
-
(2007)
Cell
, vol.129
, pp. 665-679
-
-
Moldovan, G.-L.1
Pfander, B.2
Jentsch, S.3
-
24
-
-
77049127484
-
Role of yeast Rad5 and its human orthologs, HLTF and SHPRH in DNA damage tolerance
-
Unk, I., Hajdú, I., Blastyák, A., and Haracska, L. (2010) Role of yeast Rad5 and its human orthologs, HLTF and SHPRH in DNA damage tolerance DNA Repair 9, 257 - 267
-
(2010)
DNA Repair
, vol.9
, pp. 257-267
-
-
Unk, I.1
Hajdú, I.2
Blastyák, A.3
Haracska, L.4
-
25
-
-
29144499065
-
Ubiquitin-Binding Domains in Y-Family Polymerases Regulate Translesion Synthesis
-
Bienko, M., Green, C. M., Crosetto, N., Rudolf, F., Zapart, G., Coull, B., Kannouche, P., Wider, G., Peter, M., Lehmann, A. R., Hofmann, K., and Dikic, I. (2005) Ubiquitin-Binding Domains in Y-Family Polymerases Regulate Translesion Synthesis Science 310, 1821 - 1824
-
(2005)
Science
, vol.310
, pp. 1821-1824
-
-
Bienko, M.1
Green, C.M.2
Crosetto, N.3
Rudolf, F.4
Zapart, G.5
Coull, B.6
Kannouche, P.7
Wider, G.8
Peter, M.9
Lehmann, A.R.10
Hofmann, K.11
Dikic, I.12
-
26
-
-
70349441058
-
Ubiquitin-binding domains: From structures to functions
-
Dikic, I., Wakatsuki, S., and Walters, K. J. (2009) Ubiquitin-binding domains: From structures to functions Nat. Rev. Mol. Cell Biol. 10, 659 - 671
-
(2009)
Nat. Rev. Mol. Cell Biol.
, vol.10
, pp. 659-671
-
-
Dikic, I.1
Wakatsuki, S.2
Walters, K.J.3
-
27
-
-
34848877881
-
Functional characterization of Rad18 domains for Rad6, ubiquitin, DNA binding and PCNA modification
-
Notenboom, V., Hibbert, R. G., van Rossum-Fikkert, S. E., Olsen, J. V., Mann, M., and Sixma, T. K. (2007) Functional characterization of Rad18 domains for Rad6, ubiquitin, DNA binding and PCNA modification Nucleic Acids Res. 35, 5819 - 5830
-
(2007)
Nucleic Acids Res.
, vol.35
, pp. 5819-5830
-
-
Notenboom, V.1
Hibbert, R.G.2
Van Rossum-Fikkert, S.E.3
Olsen, J.V.4
Mann, M.5
Sixma, T.K.6
-
28
-
-
2442417331
-
Interaction of Human DNA Polymerase η with Monoubiquitinated PCNA: A Possible Mechanism for the Polymerase Switch in Response to DNA Damage
-
Kannouche, P. L., Wing, J., and Lehmann, A. R. (2004) Interaction of Human DNA Polymerase η with Monoubiquitinated PCNA: A Possible Mechanism for the Polymerase Switch in Response to DNA Damage Mol. Cell 14, 491 - 500
-
(2004)
Mol. Cell
, vol.14
, pp. 491-500
-
-
Kannouche, P.L.1
Wing, J.2
Lehmann, A.R.3
-
29
-
-
6344288785
-
Rad18 guides polη to replication stalling sites through physical interaction and PCNA monoubiquitination
-
Watanabe, K., Tateishi, S., Kawasuji, M., Tsurimoto, T., Inoue, H., and Yamaizumi, M. (2004) Rad18 guides polη to replication stalling sites through physical interaction and PCNA monoubiquitination EMBO J. 23, 3886 - 3896
-
(2004)
EMBO J.
, vol.23
, pp. 3886-3896
-
-
Watanabe, K.1
Tateishi, S.2
Kawasuji, M.3
Tsurimoto, T.4
Inoue, H.5
Yamaizumi, M.6
-
30
-
-
12844278716
-
Differential Regulation of Rad18 through Rad6-dependent Mono- and Polyubiquitination
-
Miyase, S., Tateishi, S., Watanabe, K., Tomita, K., Suzuki, K., Inoue, H., and Yamaizumi, M. (2005) Differential Regulation of Rad18 through Rad6-dependent Mono- and Polyubiquitination J. Biol. Chem. 280, 515 - 524
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 515-524
-
-
Miyase, S.1
Tateishi, S.2
Watanabe, K.3
Tomita, K.4
Suzuki, K.5
Inoue, H.6
Yamaizumi, M.7
-
31
-
-
84863139256
-
Asymmetric nature of two subunits of RAD18, a RING-type ubiquitin ligase E3, in the human RAD6A,RAD18 ternary complex
-
Masuda, Y., Suzuki, M., Kawai, H., Suzuki, F., and Kamiya, K. (2012) Asymmetric nature of two subunits of RAD18, a RING-type ubiquitin ligase E3, in the human RAD6A,RAD18 ternary complex Nucleic Acids Res. 40, 1065 - 1076
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. 1065-1076
-
-
Masuda, Y.1
Suzuki, M.2
Kawai, H.3
Suzuki, F.4
Kamiya, K.5
-
32
-
-
65549143757
-
RAD18 promotes DNA double-strand break repair during G1 phase through chromatin retention of 53BP1
-
Watanabe, K., Iwabuchi, K., Sun, J., Tsuji, Y., Tani, T., Tokunaga, K., Date, T., Hashimoto, M., Yamaizumi, M., and Tateishi, S. (2009) RAD18 promotes DNA double-strand break repair during G1 phase through chromatin retention of 53BP1 Nucleic Acids Res. 37, 2176 - 2193
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. 2176-2193
-
-
Watanabe, K.1
Iwabuchi, K.2
Sun, J.3
Tsuji, Y.4
Tani, T.5
Tokunaga, K.6
Date, T.7
Hashimoto, M.8
Yamaizumi, M.9
Tateishi, S.10
-
33
-
-
80051713813
-
Human RAD18 Interacts with Ubiquitylated Chromatin Components and Facilitates RAD9 Recruitment to DNA Double Strand Breaks
-
Inagaki, A., Sleddens-Linkels, E., van Cappellen, W. A., Hibbert, R. G., Sixma, T. K., Hoeijmakers, J. H. J., Grootegoed, J. A., and Baarends, W. M. (2011) Human RAD18 Interacts with Ubiquitylated Chromatin Components and Facilitates RAD9 Recruitment to DNA Double Strand Breaks PLoS One 6, e23155
-
(2011)
PLoS One
, vol.6
, pp. e23155
-
-
Inagaki, A.1
Sleddens-Linkels, E.2
Van Cappellen, W.A.3
Hibbert, R.G.4
Sixma, T.K.5
Hoeijmakers, J.H.J.6
Grootegoed, J.A.7
Baarends, W.M.8
-
34
-
-
58049199509
-
Human Wrnip1 Is Localized in Replication Factories in a Ubiquitin-binding Zinc Finger-dependent Manner
-
Crosetto, N., Bienko, M., Hibbert, R. G., Perica, T., Ambrogio, C., Kensche, T., Hofmann, K., Sixma, T. K., and Dikic, I. (2008) Human Wrnip1 Is Localized in Replication Factories in a Ubiquitin-binding Zinc Finger-dependent Manner J. Biol. Chem. 283, 35173 - 35185
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 35173-35185
-
-
Crosetto, N.1
Bienko, M.2
Hibbert, R.G.3
Perica, T.4
Ambrogio, C.5
Kensche, T.6
Hofmann, K.7
Sixma, T.K.8
Dikic, I.9
-
35
-
-
33847338933
-
Structure of the ubiquitin-binding zinc finger domain of human DNA Y-polymerase η
-
Bomar, M. G., Pai, M.-T., Tzeng, S.-R., Li, S. S.-C., and Zhou, P. (2007) Structure of the ubiquitin-binding zinc finger domain of human DNA Y-polymerase η EMBO Rep. 8, 247 - 251
-
(2007)
EMBO Rep.
, vol.8
, pp. 247-251
-
-
Bomar, M.G.1
Pai, M.-T.2
Tzeng, S.-R.3
Li, S.S.-C.4
Zhou, P.5
-
36
-
-
0024341072
-
Three-dimensional solution structure of a single zinc finger DNA-binding domain
-
Lee, M. S., Gippert, G. P., Soman, K. V., Case, D. A., and Wright, P. E. (1989) Three-dimensional solution structure of a single zinc finger DNA-binding domain Science 245, 635 - 637
-
(1989)
Science
, vol.245
, pp. 635-637
-
-
Lee, M.S.1
Gippert, G.P.2
Soman, K.V.3
Case, D.A.4
Wright, P.E.5
-
37
-
-
33644792262
-
Structural basis for ubiquitin recognition and autoubiquitination by Rabex-5
-
Lee, S., Tsai, Y. C., Mattera, R., Smith, W. J., Kostelansky, M. S., Weissman, A. M., Bonifacino, J. S., and Hurley, J. H. (2006) Structural basis for ubiquitin recognition and autoubiquitination by Rabex-5 Nat. Struct. Mol. Biol. 13, 264 - 271
-
(2006)
Nat. Struct. Mol. Biol.
, vol.13
, pp. 264-271
-
-
Lee, S.1
Tsai, Y.C.2
Mattera, R.3
Smith, W.J.4
Kostelansky, M.S.5
Weissman, A.M.6
Bonifacino, J.S.7
Hurley, J.H.8
-
38
-
-
59149093017
-
The Zinc Finger of NEMO Is a Functional Ubiquitin-binding Domain
-
Cordier, F., Grubisha, O., Traincard, F., Véron, M., Delepierre, M., and Agou, F. (2009) The Zinc Finger of NEMO Is a Functional Ubiquitin-binding Domain J. Biol. Chem. 284, 2902 - 2907
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 2902-2907
-
-
Cordier, F.1
Grubisha, O.2
Traincard, F.3
Véron, M.4
Delepierre, M.5
Agou, F.6
-
39
-
-
0024520745
-
Site-directed mutagenesis by overlap extension using the polymerase chain reaction
-
Ho, S. N., Hunt, H. D., Horton, R. M., Pullen, J. K., and Pease, L. R. (1989) Site-directed mutagenesis by overlap extension using the polymerase chain reaction Gene 77, 51 - 59
-
(1989)
Gene
, vol.77
, pp. 51-59
-
-
Ho, S.N.1
Hunt, H.D.2
Horton, R.M.3
Pullen, J.K.4
Pease, L.R.5
-
40
-
-
0347722841
-
Heteronuclear multidimensional NMR experiments for the structure determination of proteins in solution employing pulsed field gradients
-
Sattler, M., Schleucher, J., and Griesinger, C. (1999) Heteronuclear multidimensional NMR experiments for the structure determination of proteins in solution employing pulsed field gradients Prog. Nucl. Magn. Reson. Spectrosc. 34, 93 - 158
-
(1999)
Prog. Nucl. Magn. Reson. Spectrosc.
, vol.34
, pp. 93-158
-
-
Sattler, M.1
Schleucher, J.2
Griesinger, C.3
-
41
-
-
0030808350
-
Methods for Measurement of Intermolecular NOEs by Multinuclear NMR Spectroscopy: Application to a Bacteriophage λ N-Peptide/boxB RNA Complex
-
Zwahlen, C., Legault, P., Vincent, S. J. F., Greenblatt, J., Konrat, R., and Kay, L. E. (1997) Methods for Measurement of Intermolecular NOEs by Multinuclear NMR Spectroscopy: Application to a Bacteriophage λ N-Peptide/boxB RNA Complex J. Am. Chem. Soc. 119, 6711 - 6721
-
(1997)
J. Am. Chem. Soc.
, vol.119
, pp. 6711-6721
-
-
Zwahlen, C.1
Legault, P.2
Vincent, S.J.F.3
Greenblatt, J.4
Konrat, R.5
Kay, L.E.6
-
42
-
-
0029400480
-
NMRPipe: A multidimensional spectral processing system based on UNIX pipes
-
Delaglio, F., Grzesiek, S., Vuister, G., Zhu, G., Pfeifer, J., and Bax, A. (1995) NMRPipe: A multidimensional spectral processing system based on UNIX pipes J. Biomol. NMR 6, 277 - 293
-
(1995)
J. Biomol. NMR
, vol.6
, pp. 277-293
-
-
Delaglio, F.1
Grzesiek, S.2
Vuister, G.3
Zhu, G.4
Pfeifer, J.5
Bax, A.6
-
43
-
-
19444382397
-
The CCPN data model for NMR spectroscopy: Development of a software pipeline
-
Vranken, W. F., Boucher, W., Stevens, T. J., Fogh, R. H., Pajon, A., Llinas, M., Ulrich, E. L., Markley, J. L., Ionides, J., and Laue, E. D. (2005) The CCPN data model for NMR spectroscopy: Development of a software pipeline Proteins: Struct., Funct., Bioinf. 59, 687 - 696
-
(2005)
Proteins: Struct., Funct., Bioinf.
, vol.59
, pp. 687-696
-
-
Vranken, W.F.1
Boucher, W.2
Stevens, T.J.3
Fogh, R.H.4
Pajon, A.5
Llinas, M.6
Ulrich, E.L.7
Markley, J.L.8
Ionides, J.9
Laue, E.D.10
-
44
-
-
0028282555
-
15N NMR relaxation
-
15N NMR relaxation Biochemistry 33, 5984 - 6003
-
(1994)
Biochemistry
, vol.33
, pp. 5984-6003
-
-
Farrow, N.A.1
Muhandiram, R.2
Singer, A.U.3
Pascal, S.M.4
Kay, C.M.5
Gish, G.6
Shoelson, S.E.7
Pawson, T.8
Forman-Kay, J.D.9
Kay, L.E.10
-
45
-
-
4644340524
-
Automated NMR Structure Calculation with CYANA
-
In (, Ed.) Humana Press, Totowa, NJ.
-
Güntert, P. (2004) Automated NMR Structure Calculation with CYANA. In Protein NMR Techniques (Downing, A. K., Ed.) pp 353 - 378, Humana Press, Totowa, NJ.
-
(2004)
Protein NMR Techniques
, pp. 353-378
-
-
Güntert, P.1
Downing, A.K.2
-
46
-
-
68349093958
-
TALOS+: A hybrid method for predicting protein backbone torsion angles from NMR chemical shifts
-
Shen, Y., Delaglio, F., Cornilescu, G., and Bax, A. (2009) TALOS+: A hybrid method for predicting protein backbone torsion angles from NMR chemical shifts J. Biomol. NMR 44, 213 - 223
-
(2009)
J. Biomol. NMR
, vol.44
, pp. 223-213
-
-
Shen, Y.1
Delaglio, F.2
Cornilescu, G.3
Bax, A.4
-
47
-
-
0032464349
-
Analysis of zinc binding sites in protein crystal structures
-
Alberts, I. L., Nadassy, K., and Wodak, S. J. (1998) Analysis of zinc binding sites in protein crystal structures Protein Sci. 7, 1700 - 1716
-
(1998)
Protein Sci.
, vol.7
, pp. 1700-1716
-
-
Alberts, I.L.1
Nadassy, K.2
Wodak, S.J.3
-
48
-
-
3543012707
-
Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination
-
Brunger, A. T., Adams, P. D., Clore, G. M., DeLano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J.-S., Kuszewski, J., Nilges, M., Pannu, N. S., Read, R. J., Rice, L. M., Simonson, T., and Warren, G. L. (1998) Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination Acta Crystallogr. D54, 905 - 921
-
(1998)
Acta Crystallogr.
, vol.54
, pp. 905-921
-
-
Brunger, A.T.1
Adams, P.D.2
Clore, G.M.3
Delano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
Jiang, J.-S.7
Kuszewski, J.8
Nilges, M.9
Pannu, N.S.10
Read, R.J.11
Rice, L.M.12
Simonson, T.13
Warren, G.L.14
-
50
-
-
84864919890
-
Tandem Protein Interaction Modules Organize the Ubiquitin-Dependent Response to DNA Double-Strand Breaks
-
Panier, S., Ichijima, Y., Fradet-Turcotte, A., Leung, C. C., Kaustov, L., Arrowsmith, C. H., and Durocher, D. (2012) Tandem Protein Interaction Modules Organize the Ubiquitin-Dependent Response to DNA Double-Strand Breaks Mol. Cell 47, 383 - 395
-
(2012)
Mol. Cell
, vol.47
, pp. 383-395
-
-
Panier, S.1
Ichijima, Y.2
Fradet-Turcotte, A.3
Leung, C.C.4
Kaustov, L.5
Arrowsmith, C.H.6
Durocher, D.7
-
51
-
-
79959521141
-
Symmetry and Asymmetry of the RING-RING Dimer of Rad18
-
Huang, A., Hibbert, R. G., de Jong, R. N., Das, D., Sixma, T. K., and Boelens, R. (2011) Symmetry and Asymmetry of the RING-RING Dimer of Rad18 J. Mol. Biol. 410, 424 - 435
-
(2011)
J. Mol. Biol.
, vol.410
, pp. 424-435
-
-
Huang, A.1
Hibbert, R.G.2
De Jong, R.N.3
Das, D.4
Sixma, T.K.5
Boelens, R.6
-
52
-
-
79955027304
-
E3 ligase Rad18 promotes monoubiquitination rather than ubiquitin chain formation by E2 enzyme Rad6
-
Hibbert, R. G., Huang, A., Boelens, R., and Sixma, T. K. (2011) E3 ligase Rad18 promotes monoubiquitination rather than ubiquitin chain formation by E2 enzyme Rad6 Proc. Natl. Acad. Sci. U.S.A. 108, 5590 - 5595
-
(2011)
Proc. Natl. Acad. Sci. U.S.A.
, vol.108
, pp. 5590-5595
-
-
Hibbert, R.G.1
Huang, A.2
Boelens, R.3
Sixma, T.K.4
-
53
-
-
84883455916
-
PHD domain from human SHPRH
-
Machado, L. F., Pustovalova, Y., Kile, A., Pozhidaeva, A., Cimprich, K., Almeida, F. L., Bezsonova, I., and Korzhnev, D. (2013) PHD domain from human SHPRH J. Biomol. NMR 56, 393 - 399
-
(2013)
J. Biomol. NMR
, vol.56
, pp. 393-399
-
-
MacHado, L.F.1
Pustovalova, Y.2
Kile, A.3
Pozhidaeva, A.4
Cimprich, K.5
Almeida, F.L.6
Bezsonova, I.7
Korzhnev, D.8
-
54
-
-
0026013295
-
Zinc is required for folding and binding of a single zinc finger to DNA
-
Lee, M. S., Gottesfeld, J. M., and Wright, P. E. (1991) Zinc is required for folding and binding of a single zinc finger to DNA FEBS Lett. 279, 289 - 294
-
(1991)
FEBS Lett.
, vol.279
, pp. 289-294
-
-
Lee, M.S.1
Gottesfeld, J.M.2
Wright, P.E.3
-
55
-
-
0034671463
-
Structure of the PHD Zinc Finger from Human Williams-Beuren Syndrome Transcription Factor
-
Pascual, J., Martinez-Yamout, M., Dyson, H. J., and Wright, P. E. (2000) Structure of the PHD Zinc Finger from Human Williams-Beuren Syndrome Transcription Factor J. Mol. Biol. 304, 723 - 729
-
(2000)
J. Mol. Biol.
, vol.304
, pp. 723-729
-
-
Pascual, J.1
Martinez-Yamout, M.2
Dyson, H.J.3
Wright, P.E.4
-
56
-
-
37848999781
-
Application of the random coil index to studying protein flexibility
-
Berjanskii, M. V. and Wishart, D. (2008) Application of the random coil index to studying protein flexibility J. Biomol. NMR 40, 31 - 48
-
(2008)
J. Biomol. NMR
, vol.40
, pp. 31-48
-
-
Berjanskii, M.V.1
Wishart, D.2
-
57
-
-
27544456339
-
A Simple Method to Predict Protein Flexibility Using Secondary Chemical Shifts
-
Berjanskii, M. V. and Wishart, D. S. (2005) A Simple Method To Predict Protein Flexibility Using Secondary Chemical Shifts J. Am. Chem. Soc. 127, 14970 - 14971
-
(2005)
J. Am. Chem. Soc.
, vol.127
, pp. 14970-14971
-
-
Berjanskii, M.V.1
Wishart, D.S.2
-
59
-
-
0023644679
-
Structure of ubiquitin refined at 1.8 Å resolution
-
Vijay-Kumar, S., Bugg, C. E., and Cook, W. J. (1987) Structure of ubiquitin refined at 1.8 Å resolution J. Mol. Biol. 194, 531 - 544
-
(1987)
J. Mol. Biol.
, vol.194
, pp. 531-544
-
-
Vijay-Kumar, S.1
Bugg, C.E.2
Cook, W.J.3
-
60
-
-
17144417404
-
Structure of S5a Bound to Monoubiquitin Provides a Model for Polyubiquitin Recognition
-
Wang, Q., Young, P., and Walters, K. J. (2005) Structure of S5a Bound to Monoubiquitin Provides a Model for Polyubiquitin Recognition J. Mol. Biol. 348, 727 - 739
-
(2005)
J. Mol. Biol.
, vol.348
, pp. 727-739
-
-
Wang, Q.1
Young, P.2
Walters, K.J.3
-
61
-
-
33644787880
-
Double-sided ubiquitin binding of Hrs-UIM in endosomal protein sorting
-
Hirano, S., Kawasaki, M., Ura, H., Kato, R., Raiborg, C., Stenmark, H., and Wakatsuki, S. (2006) Double-sided ubiquitin binding of Hrs-UIM in endosomal protein sorting Nat. Struct. Mol. Biol. 13, 272 - 277
-
(2006)
Nat. Struct. Mol. Biol.
, vol.13
, pp. 272-277
-
-
Hirano, S.1
Kawasaki, M.2
Ura, H.3
Kato, R.4
Raiborg, C.5
Stenmark, H.6
Wakatsuki, S.7
-
62
-
-
27344440132
-
Conservation and relative importance of residues across protein-protein interfaces
-
Guharoy, M. and Chakrabarti, P. (2005) Conservation and relative importance of residues across protein-protein interfaces Proc. Natl. Acad. Sci. U.S.A. 102, 15447 - 15452
-
(2005)
Proc. Natl. Acad. Sci. U.S.A.
, vol.102
, pp. 15447-15452
-
-
Guharoy, M.1
Chakrabarti, P.2
-
63
-
-
33745581677
-
Controlling the subcellular localization of DNA polymerases ι and η via interactions with ubiquitin
-
Plosky, B. S., Vidal, A. E., de Henestrosa, A. R. F., McLenigan, M. P., McDonald, J. P., Mead, S., and Woodgate, R. (2006) Controlling the subcellular localization of DNA polymerases ι and η via interactions with ubiquitin EMBO J. 25, 2847 - 2855
-
(2006)
EMBO J.
, vol.25
, pp. 2847-2855
-
-
Plosky, B.S.1
Vidal, A.E.2
De Henestrosa, A.R.F.3
McLenigan, M.P.4
McDonald, J.P.5
Mead, S.6
Woodgate, R.7
-
64
-
-
0031473847
-
SWISS-MODEL and the Swiss-Pdb Viewer: An environment for comparative protein modeling
-
Guex, N. and Peitsch, M. C. (1997) SWISS-MODEL and the Swiss-Pdb Viewer: An environment for comparative protein modeling Electrophoresis 18, 2714 - 2723
-
(1997)
Electrophoresis
, vol.18
, pp. 2714-2723
-
-
Guex, N.1
Peitsch, M.C.2
-
65
-
-
36448991500
-
Clustal W and Clustal X version 2.0
-
Larkin, M. A., Blackshields, G., Brown, N. P., Chenna, R., McGettigan, P. A., McWilliam, H., Valentin, F., Wallace, I. M., Wilm, A., Lopez, R., Thompson, J. D., Gibson, T. J., and Higgins, D. G. (2007) Clustal W and Clustal X version 2.0 Bioinformatics 23, 2947 - 2948
-
(2007)
Bioinformatics
, vol.23
, pp. 2947-2948
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
Chenna, R.4
McGettigan, P.A.5
McWilliam, H.6
Valentin, F.7
Wallace, I.M.8
Wilm, A.9
Lopez, R.10
Thompson, J.D.11
Gibson, T.J.12
Higgins, D.G.13
-
66
-
-
84868207831
-
CING: An integrated residue-based structure validation program suite
-
Doreleijers, J., Sousa da Silva, A., Krieger, E., Nabuurs, S., Spronk, C. E. M., Stevens, T., Vranken, W., Vriend, G., and Vuister, G. (2012) CING: An integrated residue-based structure validation program suite J. Biomol. NMR 54, 267 - 283
-
(2012)
J. Biomol. NMR
, vol.54
, pp. 267-283
-
-
Doreleijers, J.1
Sousa Da Silva, A.2
Krieger, E.3
Nabuurs, S.4
Spronk, C.E.M.5
Stevens, T.6
Vranken, W.7
Vriend, G.8
Vuister, G.9
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