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Volumn 160, Issue 6, 2015, Pages 1099-1110

Hepatitis C virus RNA functionally sequesters miR-122

Author keywords

[No Author keywords available]

Indexed keywords

ARGONAUTE PROTEIN; MESSENGER RNA; MICRORNA 122; MIRAVIRSEN; VIRUS RNA; EIF2C1 PROTEIN, HUMAN; INITIATION FACTOR; MICRORNA; MIRN122 MICRORNA, HUMAN;

EID: 84924561760     PISSN: 00928674     EISSN: 10974172     Source Type: Journal    
DOI: 10.1016/j.cell.2015.02.025     Document Type: Article
Times cited : (287)

References (65)
  • 1
    • 58249088751 scopus 로고    scopus 로고
    • MicroRNAs: Target recognition and regulatory functions
    • D.P. Bartel MicroRNAs: target recognition and regulatory functions Cell 136 2009 215 233
    • (2009) Cell , vol.136 , pp. 215-233
    • Bartel, D.P.1
  • 3
    • 84880633341 scopus 로고    scopus 로고
    • Different requirements for scavenger receptor class B type i in hepatitis C virus cell-free versus cell-to-cell transmission
    • M.T. Catanese, J. Loureiro, C.T. Jones, M. Dorner, T. von Hahn, and C.M. Rice Different requirements for scavenger receptor class B type I in hepatitis C virus cell-free versus cell-to-cell transmission J. Virol. 87 2013 8282 8293
    • (2013) J. Virol. , vol.87 , pp. 8282-8293
    • Catanese, M.T.1    Loureiro, J.2    Jones, C.T.3    Dorner, M.4    Von Hahn, T.5    Rice, C.M.6
  • 4
    • 77953798171 scopus 로고    scopus 로고
    • Down-regulation of a host microRNA by a Herpesvirus saimiri noncoding RNA
    • D. Cazalla, T. Yario, and J.A. Steitz Down-regulation of a host microRNA by a Herpesvirus saimiri noncoding RNA Science 328 2010 1563 1566
    • (2010) Science , vol.328 , pp. 1563-1566
    • Cazalla, D.1    Yario, T.2    Steitz, J.A.3
  • 5
    • 23844523406 scopus 로고    scopus 로고
    • MiR-122, a mammalian liver-specific microRNA, is processed from hcr mRNA and may downregulate the high affinity cationic amino acid transporter CAT-1
    • J. Chang, E. Nicolas, D. Marks, C. Sander, A. Lerro, M.A. Buendia, C. Xu, W.S. Mason, T. Moloshok, and R. Bort miR-122, a mammalian liver-specific microRNA, is processed from hcr mRNA and may downregulate the high affinity cationic amino acid transporter CAT-1 RNA Biol. 1 2004 106 113
    • (2004) RNA Biol. , vol.1 , pp. 106-113
    • Chang, J.1    Nicolas, E.2    Marks, D.3    Sander, C.4    Lerro, A.5    Buendia, M.A.6    Xu, C.7    Mason, W.S.8    Moloshok, T.9    Bort, R.10
  • 6
    • 67749132423 scopus 로고    scopus 로고
    • Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps
    • S.W. Chi, J.B. Zang, A. Mele, and R.B. Darnell Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps Nature 460 2009 479 486
    • (2009) Nature , vol.460 , pp. 479-486
    • Chi, S.W.1    Zang, J.B.2    Mele, A.3    Darnell, R.B.4
  • 8
    • 84901838697 scopus 로고    scopus 로고
    • Assessing the ceRNA hypothesis with quantitative measurements of miRNA and target abundance
    • R. Denzler, V. Agarwal, J. Stefano, D.P. Bartel, and M. Stoffel Assessing the ceRNA hypothesis with quantitative measurements of miRNA and target abundance Mol. Cell 54 2014 766 776
    • (2014) Mol. Cell , vol.54 , pp. 766-776
    • Denzler, R.1    Agarwal, V.2    Stefano, J.3    Bartel, D.P.4    Stoffel, M.5
  • 11
    • 84866150841 scopus 로고    scopus 로고
    • Ago HITS-CLIP expands understanding of Kaposi's sarcoma-associated herpesvirus miRNA function in primary effusion lymphomas
    • e1002884-e1002884
    • I. Haecker, L.A.L. Gay, Y. Yang, J. Hu, A.M.A. Morse, L.M.L. McIntyre, and R. Renne Ago HITS-CLIP expands understanding of Kaposi's sarcoma-associated herpesvirus miRNA function in primary effusion lymphomas PLoS Pathog. 8 2012 e1002884-e1002884
    • (2012) PLoS Pathog. , vol.8
    • Haecker, I.1    Gay, L.A.L.2    Yang, Y.3    Hu, J.4    Morse, A.M.A.5    McIntyre, L.M.L.6    Renne, R.7
  • 14
    • 84874964101 scopus 로고    scopus 로고
    • Expression of heterologous proteins flanked by NS3-4A cleavage sites within the hepatitis C virus polyprotein
    • J.A. Horwitz, M. Dorner, T. Friling, B.M. Donovan, A. Vogt, J. Loureiro, T. Oh, C.M. Rice, and A. Ploss Expression of heterologous proteins flanked by NS3-4A cleavage sites within the hepatitis C virus polyprotein Virology 439 2013 23 33
    • (2013) Virology , vol.439 , pp. 23-33
    • Horwitz, J.A.1    Dorner, M.2    Friling, T.3    Donovan, B.M.4    Vogt, A.5    Loureiro, J.6    Oh, T.7    Rice, C.M.8    Ploss, A.9
  • 17
    • 24644483623 scopus 로고    scopus 로고
    • Modulation of hepatitis C virus RNA abundance by a liver-specific MicroRNA
    • C.L. Jopling, M. Yi, A.M. Lancaster, S.M. Lemon, and P. Sarnow Modulation of hepatitis C virus RNA abundance by a liver-specific MicroRNA Science 309 2005 1577 1581
    • (2005) Science , vol.309 , pp. 1577-1581
    • Jopling, C.L.1    Yi, M.2    Lancaster, A.M.3    Lemon, S.M.4    Sarnow, P.5
  • 18
    • 46749124698 scopus 로고    scopus 로고
    • Position-dependent function for a tandem microRNA miR-122-binding site located in the hepatitis C virus RNA genome
    • C.L. Jopling, S. Schütz, and P. Sarnow Position-dependent function for a tandem microRNA miR-122-binding site located in the hepatitis C virus RNA genome Cell Host Microbe 4 2008 77 85
    • (2008) Cell Host Microbe , vol.4 , pp. 77-85
    • Jopling, C.L.1    Schütz, S.2    Sarnow, P.3
  • 19
    • 82155182009 scopus 로고    scopus 로고
    • Epigenetic modulation of miR-122 facilitates human embryonic stem cell self-renewal and hepatocellular carcinoma proliferation
    • e27740-e27740
    • C.J.C. Jung, S. Iyengar, K.R.K. Blahnik, T.P.T. Ajuha, J.X.J. Jiang, P.J.P. Farnham, and M. Zern Epigenetic modulation of miR-122 facilitates human embryonic stem cell self-renewal and hepatocellular carcinoma proliferation PLoS ONE 6 2011 e27740-e27740
    • (2011) PLoS ONE , vol.6
    • Jung, C.J.C.1    Iyengar, S.2    Blahnik, K.R.K.3    Ajuha, T.P.T.4    Jiang, J.X.J.5    Farnham, P.J.P.6    Zern, M.7
  • 22
    • 84879126123 scopus 로고    scopus 로고
    • Selective degradation of host MicroRNAs by an intergenic HCMV noncoding RNA accelerates virus production
    • S. Lee, J. Song, S. Kim, J. Kim, Y. Hong, Y. Kim, D. Kim, D. Baek, and K. Ahn Selective degradation of host MicroRNAs by an intergenic HCMV noncoding RNA accelerates virus production Cell Host Microbe 13 2013 678 690
    • (2013) Cell Host Microbe , vol.13 , pp. 678-690
    • Lee, S.1    Song, J.2    Kim, S.3    Kim, J.4    Hong, Y.5    Kim, Y.6    Kim, D.7    Baek, D.8    Ahn, K.9
  • 23
    • 11844278458 scopus 로고    scopus 로고
    • Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets
    • B.P. Lewis, C.B. Burge, and D.P. Bartel Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets Cell 120 2005 15 20
    • (2005) Cell , vol.120 , pp. 15-20
    • Lewis, B.P.1    Burge, C.B.2    Bartel, D.P.3
  • 24
    • 79953201904 scopus 로고    scopus 로고
    • MicroRNA-122 antagonism against hepatitis C virus genotypes 1-6 and reduced efficacy by host RNA insertion or mutations in the HCV 5′ UTR
    • Y.-P. Li, J.M. Gottwein, T.K. Scheel, T.B. Jensen, and J. Bukh MicroRNA-122 antagonism against hepatitis C virus genotypes 1-6 and reduced efficacy by host RNA insertion or mutations in the HCV 5′ UTR Proc. Natl. Acad. Sci. USA 108 2011 4991 4996
    • (2011) Proc. Natl. Acad. Sci. USA , vol.108 , pp. 4991-4996
    • Li, Y.-P.1    Gottwein, J.M.2    Scheel, T.K.3    Jensen, T.B.4    Bukh, J.5
  • 25
    • 84874109529 scopus 로고    scopus 로고
    • MiR-122 regulates collagen production via targeting hepatic stellate cells and suppressing P4HA1 expression
    • J. Li, M. Ghazwani, Y. Zhang, J. Lu, J. Li, J. Fan, C.R. Gandhi, and S. Li miR-122 regulates collagen production via targeting hepatic stellate cells and suppressing P4HA1 expression J. Hepatol. 58 2013 522 528
    • (2013) J. Hepatol. , vol.58 , pp. 522-528
    • Li, J.1    Ghazwani, M.2    Zhang, Y.3    Lu, J.4    Li, J.5    Fan, J.6    Gandhi, C.R.7    Li, S.8
  • 26
    • 84873149944 scopus 로고    scopus 로고
    • Competing and noncompeting activities of miR-122 and the 5′ exonuclease Xrn1 in regulation of hepatitis C virus replication
    • Y. Li, T. Masaki, D. Yamane, D.R. McGivern, and S.M. Lemon Competing and noncompeting activities of miR-122 and the 5′ exonuclease Xrn1 in regulation of hepatitis C virus replication Proc. Natl. Acad. Sci. USA 110 2013 1881 1886
    • (2013) Proc. Natl. Acad. Sci. USA , vol.110 , pp. 1881-1886
    • Li, Y.1    Masaki, T.2    Yamane, D.3    McGivern, D.R.4    Lemon, S.M.5
  • 28
    • 84864020005 scopus 로고    scopus 로고
    • Ptbp2 represses adult-specific splicing to regulate the generation of neuronal precursors in the embryonic brain
    • D.D. Licatalosi, M. Yano, J.J. Fak, A. Mele, S.E. Grabinski, C. Zhang, and R.B. Darnell Ptbp2 represses adult-specific splicing to regulate the generation of neuronal precursors in the embryonic brain Genes Dev. 26 2012 1626 1642
    • (2012) Genes Dev. , vol.26 , pp. 1626-1642
    • Licatalosi, D.D.1    Yano, M.2    Fak, J.J.3    Mele, A.4    Grabinski, S.E.5    Zhang, C.6    Darnell, R.B.7
  • 29
    • 79952768199 scopus 로고    scopus 로고
    • Masking the 5′ terminal nucleotides of the hepatitis C virus genome by an unconventional microRNA-target RNA complex
    • E.S. Machlin, P. Sarnow, and S.M. Sagan Masking the 5′ terminal nucleotides of the hepatitis C virus genome by an unconventional microRNA-target RNA complex Proc. Natl. Acad. Sci. USA 108 2011 3193 3198
    • (2011) Proc. Natl. Acad. Sci. USA , vol.108 , pp. 3193-3198
    • Machlin, E.S.1    Sarnow, P.2    Sagan, S.M.3
  • 32
    • 84893256374 scopus 로고    scopus 로고
    • Mapping Argonaute and conventional RNA-binding protein interactions with RNA at single-nucleotide resolution using HITS-CLIP and CIMS analysis
    • M.J. Moore, C. Zhang, E.C. Gantman, A. Mele, J.C. Darnell, and R.B. Darnell Mapping Argonaute and conventional RNA-binding protein interactions with RNA at single-nucleotide resolution using HITS-CLIP and CIMS analysis Nat. Protoc. 9 2014 263 293
    • (2014) Nat. Protoc. , vol.9 , pp. 263-293
    • Moore, M.J.1    Zhang, C.2    Gantman, E.C.3    Mele, A.4    Darnell, J.C.5    Darnell, R.B.6
  • 34
    • 78751704858 scopus 로고    scopus 로고
    • Competing roles of microRNA-122 recognition elements in hepatitis C virus RNA
    • N. Nasheri, R. Singaravelu, M. Goodmurphy, R.K. Lyn, and J.P. Pezacki Competing roles of microRNA-122 recognition elements in hepatitis C virus RNA Virology 410 2011 336 344
    • (2011) Virology , vol.410 , pp. 336-344
    • Nasheri, N.1    Singaravelu, R.2    Goodmurphy, M.3    Lyn, R.K.4    Pezacki, J.P.5
  • 35
    • 33144475597 scopus 로고    scopus 로고
    • Intrahepatic hepatitis C virus replication correlates with chronic hepatitis C disease severity in vivo
    • S. Pal, M.C. Shuhart, L. Thomassen, S.S. Emerson, T. Su, N. Feuerborn, J. Kae, and D.R. Gretch Intrahepatic hepatitis C virus replication correlates with chronic hepatitis C disease severity in vivo J. Virol. 80 2006 2280 2290
    • (2006) J. Virol. , vol.80 , pp. 2280-2290
    • Pal, S.1    Shuhart, M.C.2    Thomassen, L.3    Emerson, S.S.4    Su, T.5    Feuerborn, N.6    Kae, J.7    Gretch, D.R.8
  • 38
    • 84860539158 scopus 로고    scopus 로고
    • EBV and human microRNAs co-target oncogenic and apoptotic viral and human genes during latency
    • K.J. Riley, G.S. Rabinowitz, T.A. Yario, J.M. Luna, R.B. Darnell, and J.A. Steitz EBV and human microRNAs co-target oncogenic and apoptotic viral and human genes during latency EMBO J. 31 2012 2207 2221
    • (2012) EMBO J. , vol.31 , pp. 2207-2221
    • Riley, K.J.1    Rabinowitz, G.S.2    Yario, T.A.3    Luna, J.M.4    Darnell, R.B.5    Steitz, J.A.6
  • 39
  • 40
    • 79961170994 scopus 로고    scopus 로고
    • A ceRNA hypothesis: The Rosetta Stone of a hidden RNA language?
    • L. Salmena, L. Poliseno, Y. Tay, L. Kats, and P.P. Pandolfi A ceRNA hypothesis: the Rosetta Stone of a hidden RNA language? Cell 146 2011 353 358
    • (2011) Cell , vol.146 , pp. 353-358
    • Salmena, L.1    Poliseno, L.2    Tay, Y.3    Kats, L.4    Pandolfi, P.P.5
  • 41
    • 84920123049 scopus 로고    scopus 로고
    • Hepatitis C virus subverts liver-specific miR-122 to protect the viral genome from exoribonuclease Xrn2
    • C.D. Sedano, and P. Sarnow Hepatitis C virus subverts liver-specific miR-122 to protect the viral genome from exoribonuclease Xrn2 Cell Host Microbe 16 2014 257 264
    • (2014) Cell Host Microbe , vol.16 , pp. 257-264
    • Sedano, C.D.1    Sarnow, P.2
  • 42
    • 84893948746 scopus 로고    scopus 로고
    • Interferon lambda alleles predict innate antiviral immune responses and hepatitis C virus permissiveness
    • T. Sheahan, N. Imanaka, S. Marukian, M. Dorner, P. Liu, A. Ploss, and C.M. Rice Interferon lambda alleles predict innate antiviral immune responses and hepatitis C virus permissiveness Cell Host Microbe 15 2014 190 202
    • (2014) Cell Host Microbe , vol.15 , pp. 190-202
    • Sheahan, T.1    Imanaka, N.2    Marukian, S.3    Dorner, M.4    Liu, P.5    Ploss, A.6    Rice, C.M.7
  • 49
    • 79960230895 scopus 로고    scopus 로고
    • Mapping in vivo protein-RNA interactions at single-nucleotide resolution from HITS-CLIP data
    • C. Zhang, and R.B. Darnell Mapping in vivo protein-RNA interactions at single-nucleotide resolution from HITS-CLIP data Nat. Biotechnol. 29 2011 607 614
    • (2011) Nat. Biotechnol. , vol.29 , pp. 607-614
    • Zhang, C.1    Darnell, R.B.2
  • 50
  • 51
    • 0036893332 scopus 로고    scopus 로고
    • Highly permissive cell lines for subgenomic and genomic hepatitis C virus RNA replication
    • K.J. Blight, J.A. McKeating, and C.M. Rice Highly permissive cell lines for subgenomic and genomic hepatitis C virus RNA replication J. Virol. 76 2002 13001 13014
    • (2002) J. Virol. , vol.76 , pp. 13001-13014
    • Blight, K.J.1    McKeating, J.A.2    Rice, C.M.3
  • 52
    • 51049089025 scopus 로고    scopus 로고
    • The RNAseIII enzyme Drosha is critical in T cells for preventing lethal inflammatory disease
    • M.M.W. Chong, J.P. Rasmussen, A.Y. Rudensky, and D.R. Littman The RNAseIII enzyme Drosha is critical in T cells for preventing lethal inflammatory disease J. Exp. Med. 205 2008 2005 2017
    • (2008) J. Exp. Med. , vol.205 , pp. 2005-2017
    • Chong, M.M.W.1    Rasmussen, J.P.2    Rudensky, A.Y.3    Littman, D.R.4
  • 53
    • 77955801615 scopus 로고    scopus 로고
    • Galaxy: A comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences
    • Galaxy Team
    • J. Goecks, A. Nekrutenko, J. Taylor Galaxy Team Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences Genome Biol. 11 2010 R86
    • (2010) Genome Biol. , vol.11 , pp. R86
    • Goecks, J.1    Nekrutenko, A.2    Taylor, J.3
  • 54
    • 61949320778 scopus 로고    scopus 로고
    • Development and characterization of hepatitis C virus genotype 1-7 cell culture systems: Role of CD81 and scavenger receptor class B type i and effect of antiviral drugs
    • J.M. Gottwein, T.K.H. Scheel, T.B. Jensen, J.B. Lademann, J.C. Prentoe, M.L. Knudsen, A.M. Hoegh, and J. Bukh Development and characterization of hepatitis C virus genotype 1-7 cell culture systems: role of CD81 and scavenger receptor class B type I and effect of antiviral drugs Hepatology 49 2009 364 377
    • (2009) Hepatology , vol.49 , pp. 364-377
    • Gottwein, J.M.1    Scheel, T.K.H.2    Jensen, T.B.3    Lademann, J.B.4    Prentoe, J.C.5    Knudsen, M.L.6    Hoegh, A.M.7    Bukh, J.8
  • 55
    • 62549134121 scopus 로고    scopus 로고
    • Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling
    • N.T. Ingolia, S. Ghaemmaghami, J.R.S. Newman, and J.S. Weissman Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling Science 324 2009 218 223
    • (2009) Science , vol.324 , pp. 218-223
    • Ingolia, N.T.1    Ghaemmaghami, S.2    Newman, J.R.S.3    Weissman, J.S.4
  • 58
    • 62349130698 scopus 로고    scopus 로고
    • Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
    • B. Langmead, C. Trapnell, M. Pop, and S.L. Salzberg Ultrafast and memory-efficient alignment of short DNA sequences to the human genome Genome Biol. 10 2009 R25
    • (2009) Genome Biol. , vol.10 , pp. R25
    • Langmead, B.1    Trapnell, C.2    Pop, M.3    Salzberg, S.L.4
  • 61
    • 74949092081 scopus 로고    scopus 로고
    • Detection of nonneutral substitution rates on mammalian phylogenies
    • K.S. Pollard, M.J. Hubisz, K.R. Rosenbloom, and A. Siepel Detection of nonneutral substitution rates on mammalian phylogenies Genome Res. 20 2010 110 121
    • (2010) Genome Res. , vol.20 , pp. 110-121
    • Pollard, K.S.1    Hubisz, M.J.2    Rosenbloom, K.R.3    Siepel, A.4
  • 64
    • 75249087100 scopus 로고    scopus 로고
    • EdgeR: A Bioconductor package for differential expression analysis of digital gene expression data
    • M.D. Robinson, D.J. McCarthy, and G.K. Smyth edgeR: a Bioconductor package for differential expression analysis of digital gene expression data Bioinformatics 26 2010 139 140
    • (2010) Bioinformatics , vol.26 , pp. 139-140
    • Robinson, M.D.1    McCarthy, D.J.2    Smyth, G.K.3
  • 65
    • 33749838238 scopus 로고    scopus 로고
    • Determination of the hepatocellularity number for human, dog, rabbit, rat and mouse livers from protein concentration measurements
    • A.-K. Sohlenius-Sternbeck Determination of the hepatocellularity number for human, dog, rabbit, rat and mouse livers from protein concentration measurements Toxicol. In Vitro 20 2006 1582 1586
    • (2006) Toxicol. in Vitro , vol.20 , pp. 1582-1586
    • Sohlenius-Sternbeck, A.-K.1


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