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Volumn 11, Issue 1, 2015, Pages

Changes in the equine fecal microbiota associated with the use of systemic antimicrobial drugs

Author keywords

Antibiotics; Antimicrobial associated diarrhea; Horses; Intestinal bacteria; Intestinal microbiota; Microbiome

Indexed keywords

BACTERIA (MICROORGANISMS); EQUIDAE; VERRUCOMICROBIA;

EID: 84924228298     PISSN: None     EISSN: 17466148     Source Type: Journal    
DOI: 10.1186/s12917-015-0335-7     Document Type: Article
Times cited : (126)

References (40)
  • 1
    • 70449703996 scopus 로고    scopus 로고
    • What are the consequences of the disappearing human microbiota?
    • Blaser MJ, Falkow S. What are the consequences of the disappearing human microbiota? Nat Publishing Group. 2009;7:887-94.
    • (2009) Nat Publishing Group , vol.7 , pp. 887-894
    • Blaser, M.J.1    Falkow, S.2
  • 2
    • 0016970150 scopus 로고
    • Measurement of volatile fatty acid production rates in the cecum of the pony
    • Glinsky MJ, Smith RM, Spires HR, Davis CL. Measurement of volatile fatty acid production rates in the cecum of the pony. J Anim Sci. 1976;42:1465-70.
    • (1976) J Anim Sci , vol.42 , pp. 1465-1470
    • Glinsky, M.J.1    Smith, R.M.2    Spires, H.R.3    Davis, C.L.4
  • 3
    • 67649544341 scopus 로고    scopus 로고
    • The bacterial community of the horse gastrointestinal tract and its relation to fermentative acidosis, laminitis, colic, and stomach ulcers
    • Jassim Al RAM, Andrews FM. The bacterial community of the horse gastrointestinal tract and its relation to fermentative acidosis, laminitis, colic, and stomach ulcers. Vet Clin North Am Equine Pract. 2009;25:199-215.
    • (2009) Vet Clin North Am Equine Pract , vol.25 , pp. 199-215
    • Jassim Al, R.A.M.1    Andrews, F.M.2
  • 4
    • 84879033845 scopus 로고    scopus 로고
    • Effects of administration of live or inactivated virulent Rhodococccus equi and Age on the fecal microbiome of neonatal foals
    • Bordin AI, Suchodolski JS, Markel ME, Weaver KB, Steiner JM, Dowd SE, et al. Effects of administration of live or inactivated virulent Rhodococccus equi and Age on the fecal microbiome of neonatal foals. PLoS One. 2013;8:e66640.
    • (2013) PLoS One , vol.8 , pp. e66640
    • Bordin, A.I.1    Suchodolski, J.S.2    Markel, M.E.3    Weaver, K.B.4    Steiner, J.M.5    Dowd, S.E.6
  • 5
    • 84864444221 scopus 로고    scopus 로고
    • Comparison of the fecal microbiota of healthy horses and horses with colitis by high throughput sequencing of the V3-V5 region of the 16S rRNA gene
    • Costa MC, Arroyo LG, Allen-Vercoe E, Stampfli HR, Kim PT, Sturgeon A, et al. Comparison of the fecal microbiota of healthy horses and horses with colitis by high throughput sequencing of the V3-V5 region of the 16S rRNA gene. PLoS One. 2012;7:e41484.
    • (2012) PLoS One , vol.7 , pp. e41484
    • Costa, M.C.1    Arroyo, L.G.2    Allen-Vercoe, E.3    Stampfli, H.R.4    Kim, P.T.5    Sturgeon, A.6
  • 8
    • 83055186550 scopus 로고    scopus 로고
    • Characterization of the fecal bacteria communities of forage-fed horses by pyrosequencing of 16S rRNA V4 gene amplicons
    • Shepherd ML, Swecker WSJ, Jensen RV, Ponder MA. Characterization of the fecal bacteria communities of forage-fed horses by pyrosequencing of 16S rRNA V4 gene amplicons. FEMS Microbiol Lett. 2012;326:62-8.
    • (2012) FEMS Microbiol Lett , vol.326 , pp. 62-68
    • Shepherd, M.L.1    Swecker, W.S.J.2    Jensen, R.V.3    Ponder, M.A.4
  • 9
    • 84869863835 scopus 로고    scopus 로고
    • Pyrosequencing of 16S rRNA genes in fecal samples reveals high diversity of hindgut microflora in horses and potential links to chronic laminitis
    • Steelman SM, Chowdhary BP, Dowd S, Suchodolski J, Janecka JE. Pyrosequencing of 16S rRNA genes in fecal samples reveals high diversity of hindgut microflora in horses and potential links to chronic laminitis. BMC Vet Res. 2012;8:1-1.
    • (2012) BMC Vet Res , vol.8 , pp. 1-1
    • Steelman, S.M.1    Chowdhary, B.P.2    Dowd, S.3    Suchodolski, J.4    Janecka, J.E.5
  • 10
    • 77951928531 scopus 로고    scopus 로고
    • Changes in faecal bacteria associated with concentrate and forage-only diets fed to horses in training
    • Willing BP, Voros A, Roos S, Jones C, Jansson A, Lindberg JE. Changes in faecal bacteria associated with concentrate and forage-only diets fed to horses in training. Equine Vet J. 2009;41:908-14.
    • (2009) Equine Vet J , vol.41 , pp. 908-914
    • Willing, B.P.1    Voros, A.2    Roos, S.3    Jones, C.4    Jansson, A.5    Lindberg, J.E.6
  • 11
    • 84863561745 scopus 로고    scopus 로고
    • Alterations in microbiota and fermentation products in equine large intestine in response to dietary variation and intestinal disease
    • Daly K, Proudman CJ, Duncan SH, Flint HJ, Dyer J, Shirazi-Beechey SP. Alterations in microbiota and fermentation products in equine large intestine in response to dietary variation and intestinal disease. Br J Nutr. 2012;107:989-95.
    • (2012) Br J Nutr , vol.107 , pp. 989-995
    • Daly, K.1    Proudman, C.J.2    Duncan, S.H.3    Flint, H.J.4    Dyer, J.5    Shirazi-Beechey, S.P.6
  • 12
  • 14
    • 84876275720 scopus 로고    scopus 로고
    • Effect of transportation on fecal bacterial communities and fermentative activities in horses: Impact of Saccharomyces cerevisiae CNCM I-1077 supplementation
    • Faubladier C, Chaucheyras-Durand F, da Veiga L, Julliand V. Effect of transportation on fecal bacterial communities and fermentative activities in horses: Impact of Saccharomyces cerevisiae CNCM I-1077 supplementation. J Anim Sci. 2013;91:1736-44.
    • (2013) J Anim Sci , vol.91 , pp. 1736-1744
    • Faubladier, C.1    Chaucheyras-Durand, F.2    Veiga, L.3    Julliand, V.4
  • 15
    • 84880509996 scopus 로고    scopus 로고
    • Diarrhea-associated pathogens, lactobacilli and cellulolytic bacteria in equine feces: Responses to antibiotic challenge
    • Harlow BE, Lawrence LM, Flythe MD. Diarrhea-associated pathogens, lactobacilli and cellulolytic bacteria in equine feces: Responses to antibiotic challenge. Vet Microbiol. 2013;166:225-32.
    • (2013) Vet Microbiol , vol.166 , pp. 225-232
    • Harlow, B.E.1    Lawrence, L.M.2    Flythe, M.D.3
  • 16
    • 67649547621 scopus 로고    scopus 로고
    • Acute diarrhea in hospitalized horses
    • Chapman AM. Acute diarrhea in hospitalized horses. Vet Clin North Am Equine Pract. 2009;25:363-80.
    • (2009) Vet Clin North Am Equine Pract , vol.25 , pp. 363-380
    • Chapman, A.M.1
  • 18
    • 0033073075 scopus 로고    scopus 로고
    • Characteristics and risk factors for failure of horses with acute diarrhea to survive: 122 cases (1990-1996)
    • Cohen ND, Woods AM. Characteristics and risk factors for failure of horses with acute diarrhea to survive: 122 cases (1990-1996). J Am Vet Med Assoc. 1999;214:382-90.
    • (1999) J Am Vet Med Assoc , vol.214 , pp. 382-390
    • Cohen, N.D.1    Woods, A.M.2
  • 19
    • 51349099975 scopus 로고    scopus 로고
    • Effect of antibiotic therapy on human fecal microbiota and the relation to the development of Clostridium difficile
    • Cochetière MF, Durand T, Lalande V, Petit JC, Potel G, Beaugerie L. Effect of antibiotic therapy on human fecal microbiota and the relation to the development of Clostridium difficile. Microb Ecol. 2008;56:395-402.
    • (2008) Microb Ecol , vol.56 , pp. 395-402
    • Cochetière, M.F.1    Durand, T.2    Lalande, V.3    Petit, J.C.4    Potel, G.5    Beaugerie, L.6
  • 20
    • 79952756960 scopus 로고    scopus 로고
    • Incomplete recovery and individualized responses of the human distal gut microbiota to repeated antibiotic perturbation
    • Dethlefsen L, Relman DA. Incomplete recovery and individualized responses of the human distal gut microbiota to repeated antibiotic perturbation. Proc Natl Acad Sci U S A. 2011;108 Suppl 1:4554-61.
    • (2011) Proc Natl Acad Sci U S A , vol.108 , pp. 4554-4561
    • Dethlefsen, L.1    Relman, D.A.2
  • 21
    • 34249947608 scopus 로고    scopus 로고
    • Parenteral long-acting amoxicillin reduces intestinal bacterial community diversity in piglets even 5 weeks after the administration
    • Janczyk P, Pieper R, Souffrant WB, Bimczok D, Rothkötter H-J, Smidt H. Parenteral long-acting amoxicillin reduces intestinal bacterial community diversity in piglets even 5 weeks after the administration. ISME J. 2007;1:180-3.
    • (2007) ISME J , vol.1 , pp. 180-183
    • Janczyk, P.1    Pieper, R.2    Souffrant, W.B.3    Bimczok, D.4    Rothkötter, H.-J.5    Smidt, H.6
  • 24
    • 0020374343 scopus 로고
    • Comparative effects of oral administration of trimethoprim/sulphadiazine or oxytetracycline on the faecal flora of horses
    • White G, Prior SD. Comparative effects of oral administration of trimethoprim/sulphadiazine or oxytetracycline on the faecal flora of horses. Vet Rec. 1982;111:316-8.
    • (1982) Vet Rec , vol.111 , pp. 316-318
    • White, G.1    Prior, S.D.2
  • 25
    • 0033037458 scopus 로고    scopus 로고
    • Repeated administration of trimethoprim/sulfadiazine in the horse-pharmacokinetics, plasma protein binding and influence on the intestinal microflora
    • Gustafsson A, Baverud V, Franklin A, Gunnarsson A, Ogren G, Ingvast-Larsson C. Repeated administration of trimethoprim/sulfadiazine in the horse-pharmacokinetics, plasma protein binding and influence on the intestinal microflora. J Vet Pharmacol Ther. 1999;22:20-6.
    • (1999) J Vet Pharmacol Ther , vol.22 , pp. 20-26
    • Gustafsson, A.1    Baverud, V.2    Franklin, A.3    Gunnarsson, A.4    Ogren, G.5    Ingvast-Larsson, C.6
  • 29
    • 84885425150 scopus 로고    scopus 로고
    • Pharmacokinetic/pharmacodynamic assessment of the effects of parenteral administration of a fluoroquinolone on the intestinal microbiota: comparison of bactericidal activity at the gut versus the systemic level in a pig model
    • Ferran AA, Bibbal D, Pellet T, Laurentie M, Gicquel-Bruneau M, Sanders P, et al. Pharmacokinetic/pharmacodynamic assessment of the effects of parenteral administration of a fluoroquinolone on the intestinal microbiota: comparison of bactericidal activity at the gut versus the systemic level in a pig model. Int J Antimicrob Agents. 2013;42:429-35.
    • (2013) Int J Antimicrob Agents , vol.42 , pp. 429-435
    • Ferran, A.A.1    Bibbal, D.2    Pellet, T.3    Laurentie, M.4    Gicquel-Bruneau, M.5    Sanders, P.6
  • 30
    • 0019131541 scopus 로고
    • Metabolic fate of SCE-1365, a new broad-spectrum cephalosporin, after parenteral administration to rats and dogs
    • Tanayama S, Yoshida K, Adachi K, Kondo T. Metabolic fate of SCE-1365, a new broad-spectrum cephalosporin, after parenteral administration to rats and dogs. Antimicrob Agents Chemother. 1980;18:511-8.
    • (1980) Antimicrob Agents Chemother , vol.18 , pp. 511-518
    • Tanayama, S.1    Yoshida, K.2    Adachi, K.3    Kondo, T.4
  • 31
  • 32
    • 79952759738 scopus 로고    scopus 로고
    • Antibiotic administration alters the community structure of the gastrointestinal micobiota
    • Robinson CJ, Young VB. Antibiotic administration alters the community structure of the gastrointestinal micobiota. Gut Microbes. 2010;1:279-84.
    • (2010) Gut Microbes , vol.1 , pp. 279-284
    • Robinson, C.J.1    Young, V.B.2
  • 33
    • 79960289551 scopus 로고    scopus 로고
    • Evaluation of intestinal microbiotas of healthy Japanese adults and effect of antibiotics using the 16S ribosomal RNA gene based clone library method
    • Morotomi N, Fukuda K, Nakano M, Ichihara S, Oono T, Yamazaki T, et al. Evaluation of intestinal microbiotas of healthy Japanese adults and effect of antibiotics using the 16S ribosomal RNA gene based clone library method. Biol Pharm Bull. 2011;34:1011-20.
    • (2011) Biol Pharm Bull , vol.34 , pp. 1011-1020
    • Morotomi, N.1    Fukuda, K.2    Nakano, M.3    Ichihara, S.4    Oono, T.5    Yamazaki, T.6
  • 34
    • 84871808499 scopus 로고    scopus 로고
    • Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies
    • Klindworth A, Pruesse E, Schweer T, Peplies J, Quast C, Horn M, et al. Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies. Nucleic Acids Res. 2013;41:e1.
    • (2013) Nucleic Acids Res , vol.41 , pp. e1
    • Klindworth, A.1    Pruesse, E.2    Schweer, T.3    Peplies, J.4    Quast, C.5    Horn, M.6
  • 35
    • 72949107142 scopus 로고    scopus 로고
    • Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities
    • Schloss PD, Westcott SL, Ryabin T, Hall JR, Hartmann M, Hollister EB, et al. Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl Environ Microbiol. 2009;75:7537-41.
    • (2009) Appl Environ Microbiol , vol.75 , pp. 7537-7541
    • Schloss, P.D.1    Westcott, S.L.2    Ryabin, T.3    Hall, J.R.4    Hartmann, M.5    Hollister, E.B.6
  • 36
    • 84884251320 scopus 로고    scopus 로고
    • Development of a dual-index sequencing strategy and curation pipeline for analyzing amplicon sequence data on the MiSeq illumina sequencing platform
    • Kozich JJ, Westcott SL, Baxter NT, Highlander SK, Schloss PD. Development of a dual-index sequencing strategy and curation pipeline for analyzing amplicon sequence data on the MiSeq illumina sequencing platform. Appl Environ Microbiol. 2013;79:5112-20.
    • (2013) Appl Environ Microbiol , vol.79 , pp. 5112-5120
    • Kozich, J.J.1    Westcott, S.L.2    Baxter, N.T.3    Highlander, S.K.4    Schloss, P.D.5
  • 37
    • 84873739311 scopus 로고    scopus 로고
    • The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
    • Quast C, Pruesse E, Yilmaz P, Gerken J, Schweer T, Yarza P, et al. The SILVA ribosomal RNA gene database project: improved data processing and web-based tools. Nucleic Acids Res. 2013;41:D590-6.
    • (2013) Nucleic Acids Res , vol.41 , pp. D590-D596
    • Quast, C.1    Pruesse, E.2    Yilmaz, P.3    Gerken, J.4    Schweer, T.5    Yarza, P.6
  • 39
    • 84891787231 scopus 로고    scopus 로고
    • Ribosomal database Project: data and tools for high throughput rRNA analysis
    • Cole JR, Wang Q, Fish JA, Chai B, McGarrell DM, Sun Y, et al. Ribosomal database Project: data and tools for high throughput rRNA analysis. Nucleic Acids Res. 2014;42:D633-42.
    • (2014) Nucleic Acids Res , vol.42 , pp. D633-D642
    • Cole, J.R.1    Wang, Q.2    Fish, J.A.3    Chai, B.4    McGarrell, D.M.5    Sun, Y.6
  • 40
    • 84872944584 scopus 로고    scopus 로고
    • Estimating the number of species with CatchAll.
    • Bunge J: Estimating the number of species with CatchAll. Pac Symp Biocomput 2011:121-130.
    • (2011) Pac Symp Biocomput , pp. 121-130
    • Bunge, J.1


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