-
1
-
-
69949111703
-
The core gut microbiome, energy balance and obesity
-
doi:10.1113/jphysiol.2009.174136
-
Turnbaugh PJ, Gordon JI, (2009) The core gut microbiome, energy balance and obesity. J Physiol 587: 4153-4158. doi:10.1113/jphysiol.2009.174136. PubMed: 19491241.
-
(2009)
J Physiol
, vol.587
, pp. 4153-4158
-
-
Turnbaugh, P.J.1
Gordon, J.I.2
-
2
-
-
77952158672
-
Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins
-
doi:10.1073/pnas.1002355107
-
Turnbaugh PJ, Quince C, Faith JJ, McHardy AC, Yatsunenko T, et al. (2010) Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins. Proc Natl Acad Sci USA 107(16):: 7503-7508. doi:10.1073/pnas.1002355107. PubMed: 20363958.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 7503-7508
-
-
Turnbaugh, P.J.1
Quince, C.2
Faith, J.J.3
McHardy, A.C.4
Yatsunenko, T.5
-
3
-
-
79951811014
-
Unveiling an abundant core microbiota in the human adult colon by a phylogroup-independent searching approach
-
doi:10.1038/ismej.2010.129
-
Sekelja M, Berget I, Næs T, Rudi K, (2011) Unveiling an abundant core microbiota in the human adult colon by a phylogroup-independent searching approach. ISME J 5: 519-531. doi:10.1038/ismej.2010.129. PubMed: 20740026.
-
(2011)
ISME J
, vol.5
, pp. 519-531
-
-
Sekelja, M.1
Berget, I.2
Næs, T.3
Rudi, K.4
-
4
-
-
79960854386
-
Intestinal microbiota in healthy adults: Temporal analysis reveals individual and common core and relation to intestinal symptoms
-
doi:10.1371/journal.pone.0023035
-
Jalanka-Tuovinen J, Salonen A, Nikkilä J, Immonen O, Kekkonen R, et al. (2011) Intestinal microbiota in healthy adults: Temporal analysis reveals individual and common core and relation to intestinal symptoms. PLOS ONE 6(7):: e23035. doi:10.1371/journal.pone.0023035. PubMed: 21829582.
-
(2011)
PLOS ONE
, vol.6
-
-
Jalanka-Tuovinen, J.1
Salonen, A.2
Nikkilä, J.3
Immonen, O.4
Kekkonen, R.5
-
5
-
-
84855294263
-
Beyond the venn diagram: the hunt for a core microbiome
-
doi:10.1111/j.1462-2920.2011.02585.x
-
Shade A, Handelsman J, (2012) Beyond the venn diagram: the hunt for a core microbiome. Environ Microbiol 14(1):: 4-12. doi:10.1111/j.1462-2920.2011.02585.x. PubMed: 22004523.
-
(2012)
Environ Microbiol
, vol.14
, pp. 4-12
-
-
Shade, A.1
Handelsman, J.2
-
6
-
-
67649945513
-
Development and application of the human intestinal tract chip, a phylogenetic microarray: analysis of universally conserved phylotypes in the abundant microbiota of young and elderly adults
-
doi:10.1111/j.1462-2920.2009.01900.x
-
Rajilić-Stojanović M, Heilig HGHJ, Molenaar D, Kajander K, Surakka A, (2009) Development and application of the human intestinal tract chip, a phylogenetic microarray: analysis of universally conserved phylotypes in the abundant microbiota of young and elderly adults. Environ Microbiol 11: 1736-1751. doi:10.1111/j.1462-2920.2009.01900.x. PubMed: 19508560.
-
(2009)
Environ Microbiol
, vol.11
, pp. 1736-1751
-
-
Rajilić-Stojanović, M.1
Heilig, H.G.H.J.2
Molenaar, D.3
Kajander, K.4
Surakka, A.5
-
7
-
-
0031684010
-
Temperature gradient gel electrophoresis analysis of 16S rRNA from human fecal samples reveals stable and host-specific communities of active bacteria
-
Zoetendal EG, Akkermans,. ADL, De Vos WM (1998) Temperature gradient gel electrophoresis analysis of 16S rRNA from human fecal samples reveals stable and host-specific communities of active bacteria. Appl Environ Microbiol 64: 3854-3859.
-
(1998)
Appl Environ Microbiol
, vol.64
, pp. 3854-3859
-
-
Zoetendal, E.G.1
Akkermans, A.D.L.2
De Vos, W.M.3
-
8
-
-
32944466887
-
Ecological and evolutionary forces shaping bacterial diversity in the human intestine
-
doi:10.1016/j.cell.2006.02.017
-
Ley RE, Peterson DA, Gordon JI, (2006) Ecological and evolutionary forces shaping bacterial diversity in the human intestine. Cell 124: 837-848. doi:10.1016/j.cell.2006.02.017. PubMed: 16497592.
-
(2006)
Cell
, vol.124
, pp. 837-848
-
-
Ley, R.E.1
Peterson, D.A.2
Gordon, J.I.3
-
9
-
-
84877914081
-
Bacterial colonisation of the equine gut; Comparison of mare and foal pairs by PCR-DGGE
-
doi:10.4236/aim.2012.22010
-
Earing JE, Durig AC, Gellin GL, Lawrence LM, Flythe MD, (2012) Bacterial colonisation of the equine gut; Comparison of mare and foal pairs by PCR-DGGE. Adv Microbiol 2: 79-86. doi:10.4236/aim.2012.22010.
-
(2012)
Adv Microbiol
, vol.2
, pp. 79-86
-
-
Earing, J.E.1
Durig, A.C.2
Gellin, G.L.3
Lawrence, L.M.4
Flythe, M.D.5
-
10
-
-
84886306785
-
Strong stability and host specific bacterial community in faeces of ponies
-
doi:10.1371/journal.pone.0075079
-
Blackmore TM, Dugdale A, Argo McG Curtis G, Pinloche E, Harris PAet al. (2013) Strong stability and host specific bacterial community in faeces of ponies. PLOS ONE, vol 8No. 9:: e75079. doi:10.1371/journal.pone.0075079. PubMed: 24040388.
-
(2013)
PLOS ONE
, vol.8
-
-
Blackmore, T.M.1
Dugdale, A.2
-
11
-
-
4444336776
-
Partial and total apparent digestibility of dietary carbohydrates in horses as affected by the diet
-
Varoud M, de Fombelle A, Goachet AG, Drogoul C, Julliand V, (2004) Partial and total apparent digestibility of dietary carbohydrates in horses as affected by the diet. Anim Sci 79: 61-71.
-
(2004)
Anim Sci
, vol.79
, pp. 61-71
-
-
Varoud, M.1
de Fombelle, A.2
Goachet, A.G.3
Drogoul, C.4
Julliand, V.5
-
12
-
-
0016224977
-
Sites of organic acid production and absorption in the equine gastrointestinal tract
-
Argenzio RA, Southworth M, Stevens CE, (1974) Sites of organic acid production and absorption in the equine gastrointestinal tract. Am J Physiol 226: 1043-1050. PubMed: 4824856.
-
(1974)
Am J Physiol
, vol.226
, pp. 1043-1050
-
-
Argenzio, R.A.1
Southworth, M.2
Stevens, C.E.3
-
13
-
-
0025321505
-
Energy contributions of volatile fatty acids from the gastrointestinal tract in various species
-
Bergman EN, (1990) Energy contributions of volatile fatty acids from the gastrointestinal tract in various species. Physiol Rev 70: 567-590. PubMed: 2181501.
-
(1990)
Physiol Rev
, vol.70
, pp. 567-590
-
-
Bergman, E.N.1
-
14
-
-
0028401954
-
Studies on the transport in vitro of lysine, histidine, arginine and ammonia across the mucosa of the equine colon
-
doi:10.1111/j.2042-3306.1994.tb04351.x
-
Bochröder B, Schubert R, Bödeker D, (1994) Studies on the transport in vitro of lysine, histidine, arginine and ammonia across the mucosa of the equine colon. Equine Vet J 26: 131-133. doi:10.1111/j.2042-3306.1994.tb04351.x. PubMed: 8575375.
-
(1994)
Equine Vet J
, vol.26
, pp. 131-133
-
-
Bochröder, B.1
Schubert, R.2
Bödeker, D.3
-
15
-
-
0035891738
-
Feeding practices associated with colic in horses
-
doi:10.2460/javma.2001.219.1419
-
Hudson JM, Cohen ND, Gibbs PG, Thompson JA, (2001) Feeding practices associated with colic in horses. J Am Vet Med Assoc 219(10):: 1419-1425. doi:10.2460/javma.2001.219.1419. PubMed: 11724182.
-
(2001)
J Am Vet Med Assoc
, vol.219
, pp. 1419-1425
-
-
Hudson, J.M.1
Cohen, N.D.2
Gibbs, P.G.3
Thompson, J.A.4
-
16
-
-
0029266846
-
Case-control study of the association between various management factors and development of colic in horses. Texas Equine Colic Study Group
-
Cohen ND, Matejka PL, Honnas CM, Hooper RN, (1995) Case-control study of the association between various management factors and development of colic in horses. Texas Equine Colic Study Group. J Am Vet Med Assoc 206(5):: 667-673. PubMed: 7744689.
-
(1995)
J Am Vet Med Assoc
, vol.206
, pp. 667-673
-
-
Cohen, N.D.1
Matejka, P.L.2
Honnas, C.M.3
Hooper, R.N.4
-
17
-
-
0035409314
-
A cross-sectional study of colic in horses on thoroughbred training premises in the British Isles in 1997
-
Hillyer MH, Taylor FG, French NP, (2001) A cross-sectional study of colic in horses on thoroughbred training premises in the British Isles in 1997. Equine Vet J 33(4):: 380-385. PubMed: 11469771.
-
(2001)
Equine Vet J
, vol.33
, pp. 380-385
-
-
Hillyer, M.H.1
Taylor, F.G.2
French, N.P.3
-
18
-
-
84886309664
-
Highlights of equine 2005 part 1: Baseline reference of equine health and management, 2005
-
USDA
-
USDA (2006) Highlights of equine 2005 part 1: Baseline reference of equine health and management, 2005. APHIS Info Sheet.
-
(2006)
APHIS Info Sheet
-
-
-
19
-
-
79952253836
-
Epidemiological study of pasture-associated laminitis and concurrent risk factors in the South of England
-
doi:10.1136/vr.c5177
-
Menzies-Gow NJ, Katz LM, Barker KJ, Elliott J, de Brauwere MN, et al. (2010) Epidemiological study of pasture-associated laminitis and concurrent risk factors in the South of England. Vet Rec 167: 690-694. doi:10.1136/vr.c5177. PubMed: 21257484.
-
(2010)
Vet Rec
, vol.167
, pp. 690-694
-
-
Menzies-Gow, N.J.1
Katz, L.M.2
Barker, K.J.3
Elliott, J.4
de Brauwere, M.N.5
-
20
-
-
84885474378
-
A cohort study of equine laminitis in Great Britain 2009-2011: estimation of disease frequency and description of clinical signs in 577 cases
-
doi:10.1111/evj.12047
-
Wylie CE, Collins SN, Verheyen KLP, Newton R, (2013) A cohort study of equine laminitis in Great Britain 2009-2011: estimation of disease frequency and description of clinical signs in 577 cases. Equine Vet J. doi:10.1111/evj.12047.
-
(2013)
Equine Vet J
-
-
Wylie, C.E.1
Collins, S.N.2
Verheyen, K.L.P.3
Newton, R.4
-
21
-
-
45849128996
-
Molecular insights into dietary induced colic in the horse
-
doi:10.2746/042516408X314075
-
Shirazi-Beechey SP, (2008) Molecular insights into dietary induced colic in the horse. Equine Vet J 40(4):: 414-421. doi:10.2746/042516408X314075. PubMed: 18487108.
-
(2008)
Equine Vet J
, vol.40
, pp. 414-421
-
-
Shirazi-Beechey, S.P.1
-
22
-
-
0035599716
-
Feeding and microbial disorders in horse: 1 Effects of an abrupt incorporation of two levels of barley in a hay diet on microbial profile and activites
-
doi:10.1016/S0737-0806(01)70018-4
-
de Fombelle A, Julliand V, Drogoul C, Jacotot E, (2001) Feeding and microbial disorders in horse: 1 Effects of an abrupt incorporation of two levels of barley in a hay diet on microbial profile and activites. J Equine Vet Sci 21: 439-445. doi:10.1016/S0737-0806(01)70018-4.
-
(2001)
J Equine Vet Sci
, vol.21
, pp. 439-445
-
-
de Fombelle, A.1
Julliand, V.2
Drogoul, C.3
Jacotot, E.4
-
23
-
-
55549113889
-
Microbial ecology of the equine hindgut during oligofructose-induced laminitis
-
doi:10.1038/ismej.2008.67
-
Milinovich GJ, Burrell PC, Pollitt CC, Klieve AV, Blackall LL, et al. (2008) Microbial ecology of the equine hindgut during oligofructose-induced laminitis. ISME J 2: 1089-1100. doi:10.1038/ismej.2008.67. PubMed: 18580970.
-
(2008)
ISME J
, vol.2
, pp. 1089-1100
-
-
Milinovich, G.J.1
Burrell, P.C.2
Pollitt, C.C.3
Klieve, A.V.4
Blackall, L.L.5
-
24
-
-
0035622171
-
Feeding and microbial disorders in horses: 2: Effect of three hay:grain ratios on digesta passage rate and digestibility in ponies
-
doi:10.1016/S0737-0806(01)70211-0
-
Drogoul C, de Fombelle A, Julliand V, (2001) Feeding and microbial disorders in horses: 2: Effect of three hay:grain ratios on digesta passage rate and digestibility in ponies. J Equine Vet Sci 21(10):: 487-491. doi:10.1016/S0737-0806(01)70211-0.
-
(2001)
J Equine Vet Sci
, vol.21
, pp. 487-491
-
-
Drogoul, C.1
de Fombelle, A.2
Julliand, V.3
-
25
-
-
0036780537
-
Production of amines in an in vitro model of carbohydrate overload
-
Bailey SR, Rycroft AN, Elliott J, (2002) Production of amines in an in vitro model of carbohydrate overload. J Anim Sci 80: 2656-2662. PubMed: 12413088.
-
(2002)
J Anim Sci
, vol.80
, pp. 2656-2662
-
-
Bailey, S.R.1
Rycroft, A.N.2
Elliott, J.3
-
26
-
-
3042578165
-
Effects of feeding large amounts of grain on colonic contents and feces in horses
-
doi:10.2460/ajvr.2004.65.687
-
Lopes MAF, White NA, [!(surname)!], Crisman MV, Ward DL, (2004) Effects of feeding large amounts of grain on colonic contents and feces in horses. Am J Vet Res 65(5):: 687-694. doi:10.2460/ajvr.2004.65.687. PubMed: 15141892.
-
(2004)
Am J Vet Res
, vol.65
, pp. 687-694
-
-
Lopes, M.A.F.1
White, N.A.2
Crisman, M.V.3
Ward, D.L.4
-
27
-
-
64749088636
-
Plasma concentrations of endotoxin and platelet activation in the developmental stage of oligofructose-induced laminitis
-
doi:10.1016/j.vetimm.2008.11.009
-
Bailey SR, Adair HS, Reinemeyer CR, Morgan SJ, Brooks AC, Longhofer SL, et al. (2009) Plasma concentrations of endotoxin and platelet activation in the developmental stage of oligofructose-induced laminitis. Vet Immunol Immunolpathol 129: 167-173. doi:10.1016/j.vetimm.2008.11.009. PubMed: 19091426.
-
(2009)
Vet Immunol Immunolpathol
, vol.129
, pp. 167-173
-
-
Bailey, S.R.1
Adair, H.S.2
Reinemeyer, C.R.3
Morgan, S.J.4
Brooks, A.C.5
Longhofer, S.L.6
-
28
-
-
84869863835
-
Pyrosequencing of 16S rRNA genes in fecal samples reveals high diversity of hindgut microflora in horses and potential links to chronic laminitis
-
Steelman SM, Chowdhary BP, Dowd S, Suchodoiski J, Janečka JE, (2012) Pyrosequencing of 16S rRNA genes in fecal samples reveals high diversity of hindgut microflora in horses and potential links to chronic laminitis. BMC. Vet Res 8: 231.
-
(2012)
BMC Vet Res
, vol.8
, pp. 231
-
-
Steelman, S.M.1
Chowdhary, B.P.2
Dowd, S.3
Suchodoiski, J.4
Janečka, J.E.5
-
29
-
-
84864444221
-
Comparison of the fecal microbiota of healthy horses and horses with colitis by high throughput sequencing of the V3-V5 region of the 16S rRNA gene
-
doi:10.1371/journal.pone.0041484
-
Costa MC, Arroyo LG, Allen-Vercoe E, Stämpfli HR, Kim PT, et al. (2012) Comparison of the fecal microbiota of healthy horses and horses with colitis by high throughput sequencing of the V3-V5 region of the 16S rRNA gene. PLOS ONE 7: e41484. doi:10.1371/journal.pone.0041484. PubMed: 22859989.
-
(2012)
PLOS ONE
, vol.7
-
-
Costa, M.C.1
Arroyo, L.G.2
Allen-Vercoe, E.3
Stämpfli, H.R.4
Kim, P.T.5
-
30
-
-
77955587624
-
Changes in the bacterial community of the caecum and stomach of the rabbit in response to addition of dietary caprylic acid
-
doi:10.1016/j.vetmic.2010.01.013
-
Skrivanová E, Worgan HJ, Pinloche E, Marounek M, Newbold CJ, et al. (2010) Changes in the bacterial community of the caecum and stomach of the rabbit in response to addition of dietary caprylic acid. Vet Microbiol 144: 334-339. doi:10.1016/j.vetmic.2010.01.013. PubMed: 20181443.
-
(2010)
Vet Microbiol
, vol.144
, pp. 334-339
-
-
Skrivanová, E.1
Worgan, H.J.2
Pinloche, E.3
Marounek, M.4
Newbold, C.J.5
-
31
-
-
35549007148
-
Short pyrosequencing reads suffice for accurate microbial community analysis
-
doi:10.1093/nar/gkm541
-
Liu Z, Lozupone C, Hamady M, Bushman FD, Knight R, (2007) Short pyrosequencing reads suffice for accurate microbial community analysis. Nucleic Acids Res 35: e120. doi:10.1093/nar/gkm541. PubMed: 17881377.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Liu, Z.1
Lozupone, C.2
Hamady, M.3
Bushman, F.D.4
Knight, R.5
-
32
-
-
72949107142
-
Introducing mothur: Open-Source, Platform-Independent,Community-Supported Software for Describing and Comparing Microbial Communities
-
doi:10.1128/AEM.01541-09
-
Schloss PD, Westcott SL, Ryabin T, Hall JR, Hartmann M, et al. (2009) Introducing mothur: Open-Source, Platform-Independent,Community-Supported Software for Describing and Comparing Microbial Communities. Appl Environ Microbiol 75(23):: 7537-7541. doi:10.1128/AEM.01541-09. PubMed: 19801464.
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 7537-7541
-
-
Schloss, P.D.1
Westcott, S.L.2
Ryabin, T.3
Hall, J.R.4
Hartmann, M.5
-
33
-
-
84870027011
-
Ultrafast clustering algorithms for metagenomic sequence analysis
-
doi:10.1093/bib/bbs035
-
Li W, Fu L, Niu B, Wu S, Wooley J, (2012) Ultrafast clustering algorithms for metagenomic sequence analysis. Brief Bioinform 13(6):: 656-668. doi:10.1093/bib/bbs035. PubMed: 22772836.
-
(2012)
Brief Bioinform
, vol.13
, pp. 656-668
-
-
Li, W.1
Fu, L.2
Niu, B.3
Wu, S.4
Wooley, J.5
-
34
-
-
34548293679
-
Naïve Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
-
doi:10.1128/AEM.00062-07
-
Wang Q, Garrity GM, Tiedje JM, Cole JR, (2007) Naïve Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl Environ Microbiol 73: 5261-5267. doi:10.1128/AEM.00062-07. PubMed: 17586664.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 5261-5267
-
-
Wang, Q.1
Garrity, G.M.2
Tiedje, J.M.3
Cole, J.R.4
-
35
-
-
84856563821
-
massively parallel rRNA gene sequencing exacerbates the potential for biased community diversity comparisons due to variable library sizes
-
doi:10.1111/j.1462-2920.2011.02550.x
-
Gihring TM, Green SJ, Schadt CW, (2012) massively parallel rRNA gene sequencing exacerbates the potential for biased community diversity comparisons due to variable library sizes. Environ Microbiol 14(2):: 285-290. doi:10.1111/j.1462-2920.2011.02550.x. PubMed: 21923700.
-
(2012)
Environ Microbiol
, vol.14
, pp. 285-290
-
-
Gihring, T.M.1
Green, S.J.2
Schadt, C.W.3
-
36
-
-
10744219802
-
Quantitative real-time PCR using TaqMan and SYBR Green for Actinobacillus actinomycetemcomitans, Porphyromonas gingivalis, Prevotella intermedia, tetQ gene and total bacteria
-
doi:10.1016/S0928-8244(03)00224-4
-
Maeda H, Fujimoto C, Haruki Y, Maeda T, Kokeguchi S, et al. (2003) Quantitative real-time PCR using TaqMan and SYBR Green for Actinobacillus actinomycetemcomitans, Porphyromonas gingivalis, Prevotella intermedia, tetQ gene and total bacteria. FEMS Immunol Med Microbiol 39: 81-86. doi:10.1016/S0928-8244(03)00224-4. PubMed: 14557000.
-
(2003)
FEMS Immunol Med Microbiol
, vol.39
, pp. 81-86
-
-
Maeda, H.1
Fujimoto, C.2
Haruki, Y.3
Maeda, T.4
Kokeguchi, S.5
-
37
-
-
84869875590
-
a comparison of the microbiome and the metabolome of different regions of the equine hindgut
-
doi:10.1111/j.1574-6941.2012.01441.x
-
Dougal K, Harris PA, Edwards A, Pachebat JA, Blackmore TM, et al. (2012) a comparison of the microbiome and the metabolome of different regions of the equine hindgut. FEMS Microbiol Ecol 82: 642-652. doi:10.1111/j.1574-6941.2012.01441.x. PubMed: 22757649.
-
(2012)
FEMS Microbiol Ecol
, vol.82
, pp. 642-652
-
-
Dougal, K.1
Harris, P.A.2
Edwards, A.3
Pachebat, J.A.4
Blackmore, T.M.5
-
38
-
-
15544369658
-
Host-Bacterial mutualism in the human intestine
-
doi:10.1126/science.1104816
-
Bäckhed F, Ley RE, Sonnenburg JL, Peterson DA, Gordon JI, (2005) Host-Bacterial mutualism in the human intestine. Science 307: 1915-1920. doi:10.1126/science.1104816. PubMed: 15790844.
-
(2005)
Science
, vol.307
, pp. 1915-1920
-
-
Bäckhed, F.1
Ley, R.E.2
Sonnenburg, J.L.3
Peterson, D.A.4
Gordon, J.I.5
-
39
-
-
46249085739
-
Evolution of mammals and their gut microbes
-
doi:10.1126/science.1155725
-
Ley RE, Hamady M, Lozupone CA, Turnbaugh PJ, Ramey RR, et al. (2008) Evolution of mammals and their gut microbes. Science 320: 1647-1651. doi:10.1126/science.1155725. PubMed: 18497261.
-
(2008)
Science
, vol.320
, pp. 1647-1651
-
-
Ley, R.E.1
Hamady, M.2
Lozupone, C.A.3
Turnbaugh, P.J.4
Ramey, R.R.5
-
40
-
-
78650408264
-
Diet, gut microbiota and immune responses
-
doi:10.1038/nri3148
-
Maslowski KM, Mackay CR, (2011) Diet, gut microbiota and immune responses. Nat Immunol 12: 5-9. doi:10.1038/nri3148. PubMed: 21169997.
-
(2011)
Nat Immunol
, vol.12
, pp. 5-9
-
-
Maslowski, K.M.1
Mackay, C.R.2
-
41
-
-
0035605249
-
Feeding and microbial disorders in horses: part 3 - effects of three hay: grain ratios on microbial profile and activities
-
doi:10.1016/S0737-0806(01)70159-1
-
Julliand V, de Fombelle A, Drogoul C, Jacotot E, (2001) Feeding and microbial disorders in horses: part 3- effects of three hay: grain ratios on microbial profile and activities. J Equine Vet Sci 21: 543-546. doi:10.1016/S0737-0806(01)70159-1.
-
(2001)
J Equine Vet Sci
, vol.21
, pp. 543-546
-
-
Julliand, V.1
de Fombelle, A.2
Drogoul, C.3
Jacotot, E.4
-
42
-
-
0036782879
-
Effect of a preparation of Saccharomyces cerevisiae on microbial profiles and fermentation patterns in the large intestine of horses fed a high fibre or a high starch diet
-
Medina B, Girard ID, Jacotot E, Julliand V, (2002) Effect of a preparation of Saccharomyces cerevisiae on microbial profiles and fermentation patterns in the large intestine of horses fed a high fibre or a high starch diet. J Anim Sci 80: 2600-2609. PubMed: 12413082.
-
(2002)
J Anim Sci
, vol.80
, pp. 2600-2609
-
-
Medina, B.1
Girard, I.D.2
Jacotot, E.3
Julliand, V.4
-
43
-
-
0033940312
-
Functional morphology of the equine pelvic flexure and its role in disease. A review
-
Lopes MA, Pfeiffer CJ, (2000) Functional morphology of the equine pelvic flexure and its role in disease. A review. Histol Histopathol 15(3):: 983-991. PubMed: 10963140.
-
(2000)
Histol Histopathol
, vol.15
, pp. 983-991
-
-
Lopes, M.A.1
Pfeiffer, C.J.2
-
44
-
-
0026832085
-
A two year, prospective survey of equine colic in general practice
-
doi:10.1111/j.2042-3306.1992.tb02789.x
-
Proudman CJ, (1992) A two year, prospective survey of equine colic in general practice. Equine Vet J 24(2):: 90-93. doi:10.1111/j.2042-3306.1992.tb02789.x. PubMed: 1582399.
-
(1992)
Equine Vet J
, vol.24
, pp. 90-93
-
-
Proudman, C.J.1
-
45
-
-
77956648022
-
high temporal and inter-individual variation detected in the human ileal microbiota
-
doi:10.1111/j.1462-2920.2010.02294.x
-
Booijink CCGM, El-Aidy S, Rajilić-Stojanović M, Heilig HGHJ, Troost FJ, et al. (2010) high temporal and inter-individual variation detected in the human ileal microbiota. Environ Microbiol 12(12):: 3213-3227. doi:10.1111/j.1462-2920.2010.02294.x. PubMed: 20626454.
-
(2010)
Environ Microbiol
, vol.12
, pp. 3213-3227
-
-
Booijink, C.C.G.M.1
El-Aidy, S.2
Rajilić-Stojanović, M.3
Heilig, H.G.H.J.4
Troost, F.J.5
-
46
-
-
20544444045
-
Diversity of the human intestinal microbial flora
-
doi:10.1126/science.1110591
-
Eckburg PB, Bik EM, Bernstein CN, Purdom E, Dethlefsen L, et al. (2005) Diversity of the human intestinal microbial flora. Science. 308(5728):: 1635-1638. doi:10.1126/science.1110591. PubMed: 15831718.
-
(2005)
Science
, vol.308
, pp. 1635-1638
-
-
Eckburg, P.B.1
Bik, E.M.2
Bernstein, C.N.3
Purdom, E.4
Dethlefsen, L.5
-
47
-
-
33744804299
-
Metagenomic analysis of the human distal gut microbiome
-
doi:10.1126/science.1124234
-
Gill SR, Pop M, DeBoy RT, Eckburg PB, Turnbaugh PJ, et al. (2006) Metagenomic analysis of the human distal gut microbiome. Science 312: 1355-1359. doi:10.1126/science.1124234. PubMed: 16741115.
-
(2006)
Science
, vol.312
, pp. 1355-1359
-
-
Gill, S.R.1
Pop, M.2
DeBoy, R.T.3
Eckburg, P.B.4
Turnbaugh, P.J.5
-
48
-
-
33845874101
-
An obesity-associated gut microbiome with increased capacity for energy harvest
-
doi:10.1038/nature05414
-
Turnbaugh PJ, Ley RE, Mahowald MA, Magrini V, Mardis ER, et al. (2006) An obesity-associated gut microbiome with increased capacity for energy harvest. Nature 444: 1027-1031. doi:10.1038/nature05414. PubMed: 17183312.
-
(2006)
Nature
, vol.444
, pp. 1027-1031
-
-
Turnbaugh, P.J.1
Ley, R.E.2
Mahowald, M.A.3
Magrini, V.4
Mardis, E.R.5
-
49
-
-
35348857386
-
Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases
-
doi:10.1073/pnas.0706625104
-
Frank DN, Amand St AL, Feldman RA, Boedeker EC, Harpaz N, et al. (2007) Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases. Proc Natl Acad Sci USA 104(34):: 13780-13785. doi:10.1073/pnas.0706625104. PubMed: 17699621.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 13780-13785
-
-
Frank, D.N.1
Amand St, A.L.2
Feldman, R.A.3
Boedeker, E.C.4
Harpaz, N.5
-
50
-
-
84855915896
-
Comparative metaproteomics and diversity analysis of human intestinal microbiota testifies for its temporal stability and expression of core functions
-
Kolmeder CA, de Been M, Nikkilä J, Ritamo I, Mätto J, et al. (2012) Comparative metaproteomics and diversity analysis of human intestinal microbiota testifies for its temporal stability and expression of core functions. PLoS one 7(1):: e29913.
-
(2012)
PLoS One
, vol.7
-
-
Kolmeder, C.A.1
de Been, M.2
Nikkilä, J.3
Ritamo, I.4
Mätto, J.5
-
51
-
-
70349233883
-
Towards the human intestinal phylogenetic core
-
doi:10.1111/j.1462-2920.2009.01982.x
-
Tap J, Mondot S, Levenez F, Pelletier E, Caron C, et al. (2009) Towards the human intestinal phylogenetic core. Environ Microbiol 11: 2574-2584. doi:10.1111/j.1462-2920.2009.01982.x. PubMed: 19601958.
-
(2009)
Environ Microbiol
, vol.11
, pp. 2574-2584
-
-
Tap, J.1
Mondot, S.2
Levenez, F.3
Pelletier, E.4
Caron, C.5
-
52
-
-
83055186550
-
Characterization of the fecal bacteria communities of forage-fed horses by pyrosequencing of 16S rRNA V4 gene amplicons
-
doi:10.1111/j.1574-6968.2011.02434.x
-
Shepherd ML, Swecker WS, Jensen RV, Ponder MA, (2012) Characterization of the fecal bacteria communities of forage-fed horses by pyrosequencing of 16S rRNA V4 gene amplicons. FEMS Microbiol Lett 326(1):: 62-62. doi:10.1111/j.1574-6968.2011.02434.x. PubMed: 22092776.
-
(2012)
FEMS Microbiol Lett
, vol.326
, pp. 62
-
-
Shepherd, M.L.1
Swecker, W.S.2
Jensen, R.V.3
Ponder, M.A.4
-
53
-
-
0035956608
-
Bacterial diversity within the equine large intestine as revealed by molecular analysis of cloned 16S rRNA genes
-
doi:10.1111/j.1574-6941.2001.tb00892.x
-
Daly K, Stewart CS, Flint HJ, Shirazi-Beechey SP, (2001) Bacterial diversity within the equine large intestine as revealed by molecular analysis of cloned 16S rRNA genes. FEMS Microbiol Ecol 38: 141-151. doi:10.1111/j.1574-6941.2001.tb00892.x.
-
(2001)
FEMS Microbiol Ecol
, vol.38
, pp. 141-151
-
-
Daly, K.1
Stewart, C.S.2
Flint, H.J.3
Shirazi-Beechey, S.P.4
-
54
-
-
0037447855
-
Design and evaluation of group-specific oligonucleotide probes for quantitative analysis of intestinal ecosystems: their application to assessment of equine colonic microflora
-
doi:10.1016/S0168-6496(03)00032-1
-
Daly K, Shirazi-Beechey SP, (2003) Design and evaluation of group-specific oligonucleotide probes for quantitative analysis of intestinal ecosystems: their application to assessment of equine colonic microflora. FEMS Microbiol Ecol 44: 243-252. doi:10.1016/S0168-6496(03)00032-1. PubMed: 19719641.
-
(2003)
FEMS Microbiol Ecol
, vol.44
, pp. 243-252
-
-
Daly, K.1
Shirazi-Beechey, S.P.2
-
55
-
-
40249101777
-
Phylogenetic analysis of hindgut microbiota in Hokkaido native horses compared to light horses
-
doi:10.1111/j.1740-0929.2008.00522.x
-
Yamano H, Koike S, Kobayashi Y, Hata H, (2008) Phylogenetic analysis of hindgut microbiota in Hokkaido native horses compared to light horses. Anim Sci J 79: 234-242. doi:10.1111/j.1740-0929.2008.00522.x.
-
(2008)
Anim Sci J
, vol.79
, pp. 234-242
-
-
Yamano, H.1
Koike, S.2
Kobayashi, Y.3
Hata, H.4
-
56
-
-
77951928531
-
Changes in faecal bacteria associated with concentrate and forage-only diets fed to horses in training
-
Willing B, V?r?s A, Roos S, Jones C, Jansson Aet al (2009) Changes in faecal bacteria associated with concentrate and forage-only diets fed to horses in training. Equine Vet J 41(9):: 904-914. PubMed: 20383990.
-
(2009)
Equine Vet J
, vol.41
, pp. 904-914
-
-
Willing, B.1
-
57
-
-
27644574002
-
Molecular analysis of jejuna, ileal, caecal and recto-sigmoidal human colonic microbiota using 16S rRNA gene libraries and terminal restriction fragment length polymorphism
-
doi:10.1099/jmm.0.45935-0
-
Hayashi H, Takahashi R, Nishi T, Sakamoto M, Benno Y, (2005) Molecular analysis of jejuna, ileal, caecal and recto-sigmoidal human colonic microbiota using 16S rRNA gene libraries and terminal restriction fragment length polymorphism. J Med Microbiol 54: 1093-1101. doi:10.1099/jmm.0.45935-0. PubMed: 16192442.
-
(2005)
J Med Microbiol
, vol.54
, pp. 1093-1101
-
-
Hayashi, H.1
Takahashi, R.2
Nishi, T.3
Sakamoto, M.4
Benno, Y.5
-
58
-
-
84861139654
-
Equine stomachs harbour an abundant and diverse mucosal microbiota
-
doi:10.1128/AEM.06252-11
-
Perkins GA, den Bakker HC, Burton AJ, Erb HN, McDonough PL, et al. (2012) Equine stomachs harbour an abundant and diverse mucosal microbiota. Appl Environ Microbiol 78(8):: 2522-2532. doi:10.1128/AEM.06252-11. PubMed: 22307294.
-
(2012)
Appl Environ Microbiol
, vol.78
, pp. 2522-2532
-
-
Perkins, G.A.1
den Bakker, H.C.2
Burton, A.J.3
Erb, H.N.4
McDonough, P.L.5
-
59
-
-
67650021209
-
Microbial community profiling for human microbiome projects: Tools, techniques and challenges
-
doi:10.1101/gr.085464.108
-
Hamady M, Knight R, (2009) Microbial community profiling for human microbiome projects: Tools, techniques and challenges. Genome Res 19: 1141-1152. doi:10.1101/gr.085464.108. PubMed: 19383763.
-
(2009)
Genome Res
, vol.19
, pp. 1141-1152
-
-
Hamady, M.1
Knight, R.2
-
60
-
-
77950251400
-
A human gut microbial gene catalogue established by metagenomic sequencing
-
doi:10.1038/nature08821
-
Qin J, Li R, Raes J, Arumugam M, Solvsten Burgdorf K, Manichanh C, et al. (2010) A human gut microbial gene catalogue established by metagenomic sequencing. Nature 464: 59-67. doi:10.1038/nature08821. PubMed: 20203603.
-
(2010)
Nature
, vol.464
, pp. 59-67
-
-
Qin, J.1
Li, R.2
Raes, J.3
Arumugam, M.4
Solvsten Burgdorf, K.5
Manichanh, C.6
-
61
-
-
68949203136
-
The family Lachnospiraceae, including the genera Butyrivibrio, Lachnospira and Roseburia
-
Cotta M, Forster R, (2006) The family Lachnospiraceae, including the genera Butyrivibrio, Lachnospira and Roseburia. Prokaryotes 4: 1002-1021.
-
(2006)
Prokaryotes
, vol.4
, pp. 1002-1021
-
-
Cotta, M.1
Forster, R.2
-
62
-
-
0037126667
-
Microbiol Butyrate Formation Hum Colon FEMS
-
Pryde SE, Duncan SH, Hold GL, Stewart CS, Flint HJ, (2002) Microbiol Butyrate Formation Hum Colon FEMS Microb Lett 217: 133-139.
-
(2002)
Microb Lett
, vol.217
, pp. 133-139
-
-
Pryde, S.E.1
Duncan, S.H.2
Hold, G.L.3
Stewart, C.S.4
Flint, H.J.5
-
63
-
-
80054722148
-
Gut microbiome metagenomis analysis suggests a functional model for the development of autoimmunity for Type 1 Diabetes
-
doi:10.1371/journal.pone.0025792
-
Brown CT, Davis-Richardson AG, Giongo A, Gano KA, Crabb DB, et al. (2011) Gut microbiome metagenomis analysis suggests a functional model for the development of autoimmunity for Type 1 Diabetes. PLOS ONE 6(10):: e25792. doi:10.1371/journal.pone.0025792. PubMed: 22043294.
-
(2011)
PLOS ONE
, vol.6
-
-
Brown, C.T.1
Davis-Richardson, A.G.2
Giongo, A.3
Gano, K.A.4
Crabb, D.B.5
-
64
-
-
77954730922
-
Animal-to-animal variation in fecal microbial diversity among beef cattle
-
doi:10.1128/AEM.00207-10
-
Durso LM, Harhay GP, Smith TPL, Bono JL, DeSantis TZ, et al. (2010) Animal-to-animal variation in fecal microbial diversity among beef cattle. Appl Environ Microbiol 76(14):: 4858-4862. doi:10.1128/AEM.00207-10. PubMed: 20472731.
-
(2010)
Appl Environ Microbiol
, vol.76
, pp. 4858-4862
-
-
Durso, L.M.1
Harhay, G.P.2
Smith, T.P.L.3
Bono, J.L.4
DeSantis, T.Z.5
-
65
-
-
84858185944
-
Composition and similarity of bovine rumen microbiota across individual animals
-
doi:10.1371/journal.pone.0033306
-
Jami E, Mizrahi I, (2012) Composition and similarity of bovine rumen microbiota across individual animals. PLOS ONE 7(3):: e33306. doi:10.1371/journal.pone.0033306. PubMed: 22432013.
-
(2012)
PLOS ONE
, vol.7
-
-
Jami, E.1
Mizrahi, I.2
-
66
-
-
74949134895
-
Defining the healthy "core microbiome" of oral microbial communities
-
doi:10.1186/1471-2180-9-259
-
Zaura E, Keijser BJF, Huse SM, Crielaard W, (2009) Defining the healthy "core microbiome" of oral microbial communities. BMC Microbiol 9: 259. doi:10.1186/1471-2180-9-259. PubMed: 20003481.
-
(2009)
BMC Microbiol
, vol.9
, pp. 259
-
-
Zaura, E.1
Keijser, B.J.F.2
Huse, S.M.3
Crielaard, W.4
-
67
-
-
84872502334
-
Metagenomic analysis of the canine oral cavity as revealed by high-throughput pyrosequencing of the 16S rRNA gene
-
doi:10.1016/j.vetmic.2012.11.018
-
Sturgeon A, Stull JW, Costa MC, Weese JS, (2013) Metagenomic analysis of the canine oral cavity as revealed by high-throughput pyrosequencing of the 16S rRNA gene. Vet Microbiol 162: 891-898. doi:10.1016/j.vetmic.2012.11.018. PubMed: 23228621.
-
(2013)
Vet Microbiol
, vol.162
, pp. 891-898
-
-
Sturgeon, A.1
Stull, J.W.2
Costa, M.C.3
Weese, J.S.4
-
68
-
-
84856577137
-
Defining the "core microbiome" of the microbial communities in the tonsils of healthy pigs
-
doi:10.1186/1471-2180-12-20
-
Lowe BA, Marsh TL, Isaacs-Cosgrove N, Kirkwood RN, Kiupel M, et al. (2012) Defining the "core microbiome" of the microbial communities in the tonsils of healthy pigs. BMC Microbiol 12: 20. doi:10.1186/1471-2180-12-20. PubMed: 22313693.
-
(2012)
BMC Microbiol
, vol.12
, pp. 20
-
-
Lowe, B.A.1
Marsh, T.L.2
Isaacs-Cosgrove, N.3
Kirkwood, R.N.4
Kiupel, M.5
|