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Volumn 10, Issue 2, 2015, Pages

Pathway-based analysis of genome-wide siRNA screens reveals the regulatory landscape of app processing

Author keywords

[No Author keywords available]

Indexed keywords

AMYLOID BETA PROTEIN[1-40]; AMYLOID BETA PROTEIN[1-42]; AMYLOID PRECURSOR PROTEIN; SMALL INTERFERING RNA; AMYLOID BETA PROTEIN; AMYLOID BETA-PROTEIN (1-42); PEPTIDE FRAGMENT; SERUM AMYLOID A;

EID: 84923820249     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0115369     Document Type: Article
Times cited : (16)

References (74)
  • 1
    • 3943092621 scopus 로고    scopus 로고
    • Pathways towards and away from Alzheimer's disease
    • PMID: 15295589
    • Mattson MP (2004) Pathways towards and away from Alzheimer's disease. Nature 430: 631-639. PMID: 15295589
    • (2004) Nature , vol.430 , pp. 631-639
    • Mattson, M.P.1
  • 2
    • 0037135111 scopus 로고    scopus 로고
    • The amyloid hypothesis of Alzheimer's disease: Progress and problems on the road to therapeutics
    • PMID: 12130773
    • Hardy J, Selkoe DJ (2002) The amyloid hypothesis of Alzheimer's disease: progress and problems on the road to therapeutics. Science 297: 353-356. PMID: 12130773
    • (2002) Science , vol.297 , pp. 353-356
    • Hardy, J.1    Selkoe, D.J.2
  • 3
    • 0036833437 scopus 로고    scopus 로고
    • Therapeutic strategies for Alzheimer's disease
    • PMID: 12415246
    • Wolfe MS (2002) Therapeutic strategies for Alzheimer's disease. Nat Rev Drug Discov 1: 859-866. PMID: 12415246
    • (2002) Nat Rev Drug Discov , vol.1 , pp. 859-866
    • Wolfe, M.S.1
  • 4
    • 27744480831 scopus 로고    scopus 로고
    • Protease inhibitors as potential disease-modifying therapeutics for Alzheimer's disease
    • PMID: 16255678
    • Beher D, Graham SL (2005) Protease inhibitors as potential disease-modifying therapeutics for Alzheimer's disease. Expert Opin Investig Drugs 14: 1385-1409. PMID: 16255678
    • (2005) Expert Opin Investig Drugs , vol.14 , pp. 1385-1409
    • Beher, D.1    Graham, S.L.2
  • 5
    • 33847021476 scopus 로고    scopus 로고
    • Presenilin diversifies its portfolio
    • PMID: 17280736
    • Parks AL, Curtis D (2007) Presenilin diversifies its portfolio. Trends Genet 23: 140-150. PMID: 17280736
    • (2007) Trends Genet , vol.23 , pp. 140-150
    • Parks, A.L.1    Curtis, D.2
  • 6
    • 33846451755 scopus 로고    scopus 로고
    • The novel gamma secretase inhibitor N-[cis-4-[(4-chlorophenyl)sulfonyl]-4-(2,5-difluorophenyl)cyclohexyl]-1,1, 1-trifluoromethanesulfonamide (MRK-560) reduces amyloid plaque deposition without evidence of notch-related pathology in the Tg2576 mouse
    • PMID: 17099072
    • Best JD, Smith DW, Reilly MA, O'Donnell R, Lewis HD, et al. (2007) The novel gamma secretase inhibitor N-[cis-4-[(4-chlorophenyl)sulfonyl]-4-(2,5-difluorophenyl)cyclohexyl]-1,1, 1-trifluoromethanesulfonamide (MRK-560) reduces amyloid plaque deposition without evidence of notch-related pathology in the Tg2576 mouse. J Pharmacol Exp Ther 320: 552-558. PMID: 17099072
    • (2007) J Pharmacol Exp Ther , vol.320 , pp. 552-558
    • Best, J.D.1    Smith, D.W.2    Reilly, M.A.3    O'Donnell, R.4    Lewis, H.D.5
  • 7
    • 79960377584 scopus 로고    scopus 로고
    • Drugs: A tangled web of targets
    • PMID: 21760583
    • Gravitz L (2011) Drugs: a tangled web of targets. Nature 475: S9-11. doi: 10.1038/475S9a PMID: 21760583
    • (2011) Nature , vol.475 , pp. S9-S11
    • Gravitz, L.1
  • 8
    • 84864471159 scopus 로고    scopus 로고
    • A mutation in APP protects against Alzheimer's disease and age-related cognitive decline
    • PMID: 22801501
    • Jonsson T, Atwal JK, Steinberg S, Snaedal J, Jonsson PV, et al. (2012) A mutation in APP protects against Alzheimer's disease and age-related cognitive decline. Nature 488: 96-99. doi: 10.1038/nature11283 PMID: 22801501
    • (2012) Nature , vol.488 , pp. 96-99
    • Jonsson, T.1    Atwal, J.K.2    Steinberg, S.3    Snaedal, J.4    Jonsson, P.V.5
  • 9
    • 33947288917 scopus 로고    scopus 로고
    • Regulation of gamma-secretase activity in Alzheimer's disease
    • PMID: 17298085
    • Zhou S, Zhou H, Walian PJ, Jap BK (2007) Regulation of gamma-secretase activity in Alzheimer's disease. Biochemistry 46: 2553-2563. PMID: 17298085
    • (2007) Biochemistry , vol.46 , pp. 2553-2563
    • Zhou, S.1    Zhou, H.2    Walian, P.J.3    Jap, B.K.4
  • 10
  • 11
    • 35848929692 scopus 로고    scopus 로고
    • A probability-based approach for the analysis of large-scale RNAi screens
    • PMID: 17828270
    • Konig R, Chiang CY, Tu BP, Yan SF, DeJesus PD, et al. (2007) A probability-based approach for the analysis of large-scale RNAi screens. Nat Methods 4: 847-849. PMID: 17828270
    • (2007) Nat Methods , vol.4 , pp. 847-849
    • Konig, R.1    Chiang, C.Y.2    Tu, B.P.3    Yan, S.F.4    DeJesus, P.D.5
  • 12
    • 39049097168 scopus 로고    scopus 로고
    • Median absolute deviation to improve hit selection for genome-scale RNAi screens
    • PMID: 18216396
    • Chung N, Zhang XD, Kreamer A, Locco L, Kuan PF, et al.(2008) Median absolute deviation to improve hit selection for genome-scale RNAi screens. J Biomol Screen 13: 149-158. doi: 10.1177/ 1087057107312035 PMID: 18216396
    • (2008) J Biomol Screen , vol.13 , pp. 149-158
    • Chung, N.1    Zhang, X.D.2    Kreamer, A.3    Locco, L.4    Kuan, P.F.5
  • 13
    • 67249143012 scopus 로고    scopus 로고
    • Host cell factors in HIV replication: Meta-analysis of genome-wide studies
    • PMID: 19478882
    • Bushman FD, Malani N, Fernandes J, D'Orso I, Cagney G, et al. (2009) Host cell factors in HIV replication: meta-analysis of genome-wide studies. PLoS Pathog 5: e1000437. doi: 10.1371/journal.ppat. 1000437 PMID: 19478882
    • (2009) PLoS Pathog , vol.5 , pp. e1000437
    • Bushman, F.D.1    Malani, N.2    Fernandes, J.3    D'Orso, I.4    Cagney, G.5
  • 14
    • 67649601037 scopus 로고    scopus 로고
    • RNAiCut: Automated detection of significant genes from functional genomic screens
    • PMID: 19564846
    • Kaplow IM, Singh R, Friedman A, Bakal C, Perrimon N, et al. (2009) RNAiCut: automated detection of significant genes from functional genomic screens. Nat Methods 6: 476-477. doi: 10.1038/nmeth0709-476 PMID: 19564846
    • (2009) Nat Methods , vol.6 , pp. 476-477
    • Kaplow, I.M.1    Singh, R.2    Friedman, A.3    Bakal, C.4    Perrimon, N.5
  • 15
    • 58149521944 scopus 로고    scopus 로고
    • Highly parallel identification of essential genes in cancer cells
    • PMID: 19091943
    • Luo B, Cheung HW, Subramanian A, Sharifnia T, Okamoto M, et al. (2008) Highly parallel identification of essential genes in cancer cells. Proc Natl Acad Sci U S A 105: 20380-20385. doi: 10.1073/pnas.0810485105 PMID: 19091943
    • (2008) Proc Natl Acad Sci U S A , vol.105 , pp. 20380-20385
    • Luo, B.1    Cheung, H.W.2    Subramanian, A.3    Sharifnia, T.4    Okamoto, M.5
  • 16
    • 80053971297 scopus 로고    scopus 로고
    • cSSMD: Assessing collective activity for addressing off-target effects in genome-scale RNA interference screens
    • PMID: 21846737
    • Zhang XD, Santini F, Lacson R, Marine SD, Wu Q, et al. (2011) cSSMD: assessing collective activity for addressing off-target effects in genome-scale RNA interference screens. Bioinformatics 27: 2775-2781. doi: 10.1093/bioinformatics/btr474 PMID: 21846737
    • (2011) Bioinformatics , vol.27 , pp. 2775-2781
    • Zhang, X.D.1    Santini, F.2    Lacson, R.3    Marine, S.D.4    Wu, Q.5
  • 17
    • 27344435774 scopus 로고    scopus 로고
    • Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
    • PMID: 16199517
    • Subramanian A, Tamayo P, Mootha VK, Mukherjee S, Ebert BL, et al. (2005) Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proc Natl Acad Sci U S A 102: 15545-15550. PMID: 16199517
    • (2005) Proc Natl Acad Sci U S A , vol.102 , pp. 15545-15550
    • Subramanian, A.1    Tamayo, P.2    Mootha, V.K.3    Mukherjee, S.4    Ebert, B.L.5
  • 18
    • 33845412897 scopus 로고    scopus 로고
    • Pathway and gene-set activation measurement from mRNA expression data: The tissue distribution of human pathways
    • PMID: 17044931
    • Levine DM, Haynor DR, Castle JC, Stepaniants SB, Pellegrini M, et al. (2006) Pathway and gene-set activation measurement from mRNA expression data: the tissue distribution of human pathways. Genome Biol 7: R93. PMID: 17044931
    • (2006) Genome Biol , vol.7 , pp. R93
    • Levine, D.M.1    Haynor, D.R.2    Castle, J.C.3    Stepaniants, S.B.4    Pellegrini, M.5
  • 19
    • 0036372454 scopus 로고    scopus 로고
    • Exploring gene expression data with class scores
    • PMID: 11928500
    • Pavlidis P, Lewis DP, Noble WS (2002) Exploring gene expression data with class scores. Pac Symp Biocomput 474-485. PMID: 11928500
    • (2002) Pac Symp Biocomput , pp. 474-485
    • Pavlidis, P.1    Lewis, D.P.2    Noble, W.S.3
  • 20
    • 33845202373 scopus 로고    scopus 로고
    • LRRTM3 promotes processing of amyloid- precursor protein by BACE1 and is a positional candidate gene for late-onset Alzheimer's disease
    • PMID: 17098871
    • Majercak J, Ray WJ, Espeseth A, Simon A, Shi XP, et al. (2006) LRRTM3 promotes processing of amyloid- precursor protein by BACE1 and is a positional candidate gene for late-onset Alzheimer's disease. Proc Natl Acad Sci U S A 103: 17967-17972. PMID: 17098871
    • (2006) Proc Natl Acad Sci U S A , vol.103 , pp. 17967-17972
    • Majercak, J.1    Ray, W.J.2    Espeseth, A.3    Simon, A.4    Shi, X.P.5
  • 21
    • 70349558522 scopus 로고    scopus 로고
    • Genome-wide association study identifies variants at CLU and PICALM associated with Alzheimer's disease
    • PMID: 19734902
    • Harold D, Abraham R, Hollingworth P, Sims R, Gerrish A, et al. (2009) Genome-wide association study identifies variants at CLU and PICALM associated with Alzheimer's disease. Nat Genet 41: 1088-1093. doi: 10.1038/ng.440 PMID: 19734902
    • (2009) Nat Genet , vol.41 , pp. 1088-1093
    • Harold, D.1    Abraham, R.2    Hollingworth, P.3    Sims, R.4    Gerrish, A.5
  • 22
    • 78549264026 scopus 로고    scopus 로고
    • Genome-wide association study identifies variants at CLU and CR1 associated with Alzheimer's disease
    • PMID: 19734903
    • Lambert JC, Heath S, Even G, Campion D, Sleegers K, et al. (2009) Genome-wide association study identifies variants at CLU and CR1 associated with Alzheimer's disease. Nat Genet 41: 1094-1099. doi: 10.1038/ng.439 PMID: 19734903
    • (2009) Nat Genet , vol.41 , pp. 1094-1099
    • Lambert, J.C.1    Heath, S.2    Even, G.3    Campion, D.4    Sleegers, K.5
  • 23
    • 77954122221 scopus 로고    scopus 로고
    • Genome-wide association studies: The key to unlocking neurodegeneration?
    • PMID: 20581814
    • Gandhi S, Wood NW (2010) Genome-wide association studies: the key to unlocking neurodegeneration?Nat Neurosci 13: 789-794. doi: 10.1038/nn.2584 PMID: 20581814
    • (2010) Nat Neurosci , vol.13 , pp. 789-794
    • Gandhi, S.1    Wood, N.W.2
  • 24
    • 78650403081 scopus 로고    scopus 로고
    • Reimagining Alzheimer's Disease-Age-Based Hypothesis
    • PMID: 21159946
    • Herrup K (2010) Reimagining Alzheimer's Disease-Age-Based Hypothesis. The Journal of Neuroscience 30: 16755-16762. doi: 10.1523/JNEUROSCI.4521-10.2010 PMID: 21159946
    • (2010) The Journal of Neuroscience , vol.30 , pp. 16755-16762
    • Herrup, K.1
  • 25
    • 84888317489 scopus 로고    scopus 로고
    • Meta-analysis of 74,046 individuals identifies 11 new susceptibility loci for Alzheimer's disease
    • ng.2802 [pii] PMID: 24162737
    • Lambert JC, Ibrahim-Verbaas CA, Harold D, Naj AC, Sims R, et al. (2013) Meta-analysis of 74,046 individuals identifies 11 new susceptibility loci for Alzheimer's disease. Nat Genet 45: 1452-1458. ng.2802 [pii]; doi: 10.1038/ng.2802 PMID: 24162737
    • (2013) Nat Genet , vol.45 , pp. 1452-1458
    • Lambert, J.C.1    Ibrahim-Verbaas, C.A.2    Harold, D.3    Naj, A.C.4    Sims, R.5
  • 26
    • 0037805576 scopus 로고    scopus 로고
    • The KEGG database
    • PMID: 12539951
    • Kanehisa M (2002) The KEGG database. Novartis Found Symp 247: 91-101. PMID: 12539951
    • (2002) Novartis Found Symp , vol.247 , pp. 91-101
    • Kanehisa, M.1
  • 27
    • 42149125510 scopus 로고    scopus 로고
    • Amyloid-degrading enzymes as therapeutic targets in Alzheimer's disease
    • PMID: 18393806
    • Nalivaeva NN, Fisk LR, Belyaev ND, Turner AJ (2008) Amyloid-degrading enzymes as therapeutic targets in Alzheimer's disease. Curr Alzheimer Res 5: 212-224. PMID: 18393806
    • (2008) Curr Alzheimer Res , vol.5 , pp. 212-224
    • Nalivaeva, N.N.1    Fisk, L.R.2    Belyaev, N.D.3    Turner, A.J.4
  • 28
    • 84878156206 scopus 로고    scopus 로고
    • Adhesion molecule L1 binds to amyloid beta and reduces Alzheimer's disease pathology in mice
    • PMID: 23639788
    • Djogo N, Jakovcevski I, Muller C, Lee HJ, Xu JC, et al. (2013) Adhesion molecule L1 binds to amyloid beta and reduces Alzheimer's disease pathology in mice. Neurobiol Dis 56: 104-115. S0969-9961(13) 00128-9 [pii]; doi: 10.1016/j.nbd.2013.04.014 PMID: 23639788
    • (2013) Neurobiol Dis , vol.56 , pp. 104-115
    • Djogo, N.1    Jakovcevski, I.2    Muller, C.3    Lee, H.J.4    Xu, J.C.5
  • 29
    • 46149126877 scopus 로고    scopus 로고
    • Secreted APP regulates the function of full-length APP in neurite outgrowth through interaction with integrin beta1
    • 1749-8104-3-15 [pii] PMID: 18573216
    • Young-Pearse TL, Chen AC, Chang R, Marquez C, Selkoe DJ (2008) Secreted APP regulates the function of full-length APP in neurite outgrowth through interaction with integrin beta1. Neural Dev 3: 15. 1749-8104-3-15 [pii]; doi: 10.1186/1749-8104-3-15 PMID: 18573216
    • (2008) Neural Dev , vol.3 , pp. 15
    • Young-Pearse, T.L.1    Chen, A.C.2    Chang, R.3    Marquez, C.4    Selkoe, D.J.5
  • 30
    • 84878842182 scopus 로고    scopus 로고
    • Slow excitotoxicity in Alzheimer's disease
    • 6L16301T37224412 [pii] PMID: 23481689
    • Ong WY, Tanaka K, Dawe GS, Ittner LM, Farooqui AA (2013) Slow excitotoxicity in Alzheimer's disease. J Alzheimers Dis 35: 643-668. 6L16301T37224412 [pii]; doi: 10.3233/JAD-121990 PMID: 23481689
    • (2013) J Alzheimers Dis , vol.35 , pp. 643-668
    • Ong, W.Y.1    Tanaka, K.2    Dawe, G.S.3    Ittner, L.M.4    Farooqui, A.A.5
  • 31
    • 79959396151 scopus 로고    scopus 로고
    • The three new pathways leading to Alzheimer's disease
    • PMID: 21486313
    • Morgan K (2011) The three new pathways leading to Alzheimer's disease. Neuropathol Appl Neurobiol 37: 353-357. doi: 10.1111/j.1365-2990.2011.01181.x PMID: 21486313
    • (2011) Neuropathol Appl Neurobiol , vol.37 , pp. 353-357
    • Morgan, K.1
  • 32
    • 80052448797 scopus 로고    scopus 로고
    • Pre-aggregated Abeta(25-35) alters arginine metabolism in the rat hippocampus and prefrontal cortex
    • PMID: 21807072
    • Liu P, Jing Y, Collie ND, Campbell SA, Zhang H (2011) Pre-aggregated Abeta(25-35) alters arginine metabolism in the rat hippocampus and prefrontal cortex. Neuroscience 193: 269-282. S0306-4522 (11)00879-7 [pii]; doi: 10.1016/j.neuroscience.2011.07.054 PMID: 21807072
    • (2011) Neuroscience , vol.193 , pp. 269-282
    • Liu, P.1    Jing, Y.2    Collie, N.D.3    Campbell, S.A.4    Zhang, H.5
  • 33
    • 0035081701 scopus 로고    scopus 로고
    • Arginine metabolism and the synthesis of nitric oxide in the nervous system
    • PMID: 11275358
    • Wiesinger H (2001) Arginine metabolism and the synthesis of nitric oxide in the nervous system. Prog Neurobiol 64: 365-391. S0301-0082(00)00056-3 [pii]. PMID: 11275358
    • (2001) Prog Neurobiol , vol.64 , pp. 365-391
    • Wiesinger, H.1
  • 34
    • 84902112745 scopus 로고    scopus 로고
    • Altered arginine metabolism in Alzheimer's disease brains
    • PMID: 24746363
    • Liu P, Fleete MS, Jing Y, Collie ND, Curtis MA, et al. (2014) Altered arginine metabolism in Alzheimer's disease brains. Neurobiol Aging 35: 1992-2003. S0197-4580(14)00267-X [pii]; doi: 10.1016/j.neurobiolaging.2014.03.013 PMID: 24746363
    • (2014) Neurobiol Aging , vol.35 , pp. 1992-2003
    • Liu, P.1    Fleete, M.S.2    Jing, Y.3    Collie, N.D.4    Curtis, M.A.5
  • 35
    • 84900298588 scopus 로고    scopus 로고
    • Secreted type of amyloid precursor protein induces glial differentiation by stimulating the BMP/Smad signaling pathway
    • PMID: 24727450
    • Kwak YD, Hendrix BJ, Sugaya K (2014) Secreted type of amyloid precursor protein induces glial differentiation by stimulating the BMP/Smad signaling pathway. Biochem Biophys Res Commun 447: 394-399. S0006-291X(14)00599-3 [pii]; doi: 10.1016/j.bbrc.2014.03.139 PMID: 24727450
    • (2014) Biochem Biophys Res Commun , vol.447 , pp. 394-399
    • Kwak, Y.D.1    Hendrix, B.J.2    Sugaya, K.3
  • 36
    • 84923809480 scopus 로고    scopus 로고
    • Disruption of axonal transport perturbs bone morphogenetic protein (BMP)-signaling and contributes to synaptic abnormalities in two neurodegenerative diseases
    • PMID: 25127478
    • Kang MJ, Hansen TJ, Mickiewicz M, Kaczynski TJ, Fye S, et al.(2014) Disruption of axonal transport perturbs bone morphogenetic protein (BMP)-signaling and contributes to synaptic abnormalities in two neurodegenerative diseases. PLoS One 9: e104617. doi: 10.1371/journal.pone.0104617 PMID: 25127478
    • (2014) PLoS One , vol.9 , pp. e104617
    • Kang, M.J.1    Hansen, T.J.2    Mickiewicz, M.3    Kaczynski, T.J.4    Fye, S.5
  • 37
    • 77949490327 scopus 로고    scopus 로고
    • Purine derivatives as potent gamma-secretase modulators
    • PMID: 20207146
    • Rivkin A, Ahearn SP, Chichetti SM, Hamblett CL, Garcia Y, et al. (2010) Purine derivatives as potent gamma-secretase modulators. Bioorg Med Chem Lett 20: 2279-2282. doi: 10.1016/j.bmcl.2010.02.008 PMID: 20207146
    • (2010) Bioorg Med Chem Lett , vol.20 , pp. 2279-2282
    • Rivkin, A.1    Ahearn, S.P.2    Chichetti, S.M.3    Hamblett, C.L.4    Garcia, Y.5
  • 38
    • 33646369950 scopus 로고    scopus 로고
    • TMP21 is a presenilin complex component that modulates gamma-secretase but not epsilon-secretase activity
    • PMID: 16641999
    • Chen F, Hasegawa H, Schmitt-Ulms G, Kawarai T, Bohm C, et al.(2006) TMP21 is a presenilin complex component that modulates gamma-secretase but not epsilon-secretase activity. Nature 440: 1208-1212. PMID: 16641999
    • (2006) Nature , vol.440 , pp. 1208-1212
    • Chen, F.1    Hasegawa, H.2    Schmitt-Ulms, G.3    Kawarai, T.4    Bohm, C.5
  • 39
    • 29144487182 scopus 로고    scopus 로고
    • Synaptic activity regulates interstitial fluid amyloid-beta levels in vivo
    • PMID: 16364896
    • Cirrito JR, Yamada KA, Finn MB, Sloviter RS, Bales KR, et al.(2005) Synaptic activity regulates interstitial fluid amyloid-beta levels in vivo. Neuron 48: 913-922. PMID: 16364896
    • (2005) Neuron , vol.48 , pp. 913-922
    • Cirrito, J.R.1    Yamada, K.A.2    Finn, M.B.3    Sloviter, R.S.4    Bales, K.R.5
  • 40
    • 70449523262 scopus 로고    scopus 로고
    • Analysis of the gamma-secretase interactome and validation of its association with tetraspanin-enriched microdomains
    • PMID: 19838174
    • Wakabayashi T, Craessaerts K, Bammens L, Bentahir M, Borgions F, et al.(2009) Analysis of the gamma-secretase interactome and validation of its association with tetraspanin-enriched microdomains. Nat Cell Biol 11: 1340-1346. doi: 10.1038/ncb1978 PMID: 19838174
    • (2009) Nat Cell Biol , vol.11 , pp. 1340-1346
    • Wakabayashi, T.1    Craessaerts, K.2    Bammens, L.3    Bentahir, M.4    Borgions, F.5
  • 41
    • 57649221135 scopus 로고    scopus 로고
    • Amyloid precursor protein trafficking, processing, and function
    • PMID: 18650430
    • Thinakaran G, Koo EH (2008) Amyloid precursor protein trafficking, processing, and function. J Biol Chem 283: 29615-29619. doi: 10.1074/jbc.R800019200 PMID: 18650430
    • (2008) J Biol Chem , vol.283 , pp. 29615-29619
    • Thinakaran, G.1    Koo, E.H.2
  • 42
    • 0037221379 scopus 로고    scopus 로고
    • The role of insulin resistance in the pathogenesis of Alzheimer's disease: Implications for treatment
    • PMID: 12467491
    • Watson GS, Craft S (2003) The role of insulin resistance in the pathogenesis of Alzheimer's disease: implications for treatment. CNS Drugs 17: 27-45. PMID: 12467491
    • (2003) CNS Drugs , vol.17 , pp. 27-45
    • Watson, G.S.1    Craft, S.2
  • 44
    • 33645299025 scopus 로고    scopus 로고
    • Ageing and neuronal vulnerability
    • PMID: 16552414
    • Mattson MP, Magnus T (2006) Ageing and neuronal vulnerability. Nat Rev Neurosci 7: 278-294. PMID: 16552414
    • (2006) Nat Rev Neurosci , vol.7 , pp. 278-294
    • Mattson, M.P.1    Magnus, T.2
  • 46
    • 44949173099 scopus 로고    scopus 로고
    • Blocking TGF-beta-Smad2/3 innate immune signaling mitigates Alzheimer-like pathology
    • PMID: 18516051
    • Town T, Laouar Y, Pittenger C, Mori T, Szekely CA, et al. (2008) Blocking TGF-beta-Smad2/3 innate immune signaling mitigates Alzheimer-like pathology. Nat Med 14: 681-687. doi: 10.1038/nm1781 PMID: 18516051
    • (2008) Nat Med , vol.14 , pp. 681-687
    • Town, T.1    Laouar, Y.2    Pittenger, C.3    Mori, T.4    Szekely, C.A.5
  • 48
    • 84869179307 scopus 로고    scopus 로고
    • Diabetes Exacerbates Amyloid and Neurovascular Pathology in Aging-accelerated Mice
    • Currais A, Prior M, Lo D, Jolivalt C, Schubert D, et al. (2012) Diabetes exacerbates amyloid and neurovascular pathology in aging-accelerated mice. Aging Cell.
    • (2012) Aging Cell
    • Currais, A.1    Prior, M.2    Lo, D.3    Jolivalt, C.4    Schubert, D.5
  • 49
    • 84870023505 scopus 로고    scopus 로고
    • Cognitive Enhancement with Rosiglitazone Links the Hippocampal PPARgamma and ERK MAPK Signaling Pathways
    • PMID: 23175826
    • Denner LA, Rodriguez-Rivera J, Haidacher SJ, Jahrling JB, Carmical JR, et al. (2012) Cognitive Enhancement with Rosiglitazone Links the Hippocampal PPARgamma and ERK MAPK Signaling Pathways. J Neurosci 32: 16725-16735. doi: 10.1523/JNEUROSCI.2153-12.2012 PMID: 23175826
    • (2012) J Neurosci , vol.32 , pp. 16725-16735
    • Denner, L.A.1    Rodriguez-Rivera, J.2    Haidacher, S.J.3    Jahrling, J.B.4    Carmical, J.R.5
  • 50
    • 78650122129 scopus 로고    scopus 로고
    • Metabolic-cognitive syndrome: A cross-talk between metabolic syndrome and Alzheimer's disease
    • PMID: 20444434
    • Frisardi V, Solfrizzi V, Seripa D, Capurso C, Santamato A, et al. (2010) Metabolic-cognitive syndrome: A cross-talk between metabolic syndrome and Alzheimer's disease. Ageing Research Reviews 9: 399-417. doi: 10.1016/j.arr.2010.04.007 PMID: 20444434
    • (2010) Ageing Research Reviews , vol.9 , pp. 399-417
    • Frisardi, V.1    Solfrizzi, V.2    Seripa, D.3    Capurso, C.4    Santamato, A.5
  • 51
    • 78650373804 scopus 로고    scopus 로고
    • Network medicine: A network-based approach to human disease
    • nrg2918 [pii] PMID: 21164525
    • Barabasi AL, Gulbahce N, Loscalzo J (2011) Network medicine: a network-based approach to human disease. Nat Rev Genet 12: 56-68. nrg2918 [pii]; doi: 10.1038/nrg2918 PMID: 21164525
    • (2011) Nat Rev Genet , vol.12 , pp. 56-68
    • Barabasi, A.L.1    Gulbahce, N.2    Loscalzo, J.3
  • 52
    • 84906987763 scopus 로고    scopus 로고
    • Altered Expression of Diabetes-Related Genes in Alzheimer's Disease Brains: The Hisayama Study
    • bht101 [pii]
    • Hokama M, Oka S, Leon J, Ninomiya T, Honda H, et al.(2013) Altered Expression of Diabetes-Related Genes in Alzheimer's Disease Brains: The Hisayama Study. Cereb Cortex. bht101 [pii]; doi: 10.1093/cercor/bht101
    • (2013) Cereb Cortex
    • Hokama, M.1    Oka, S.2    Leon, J.3    Ninomiya, T.4    Honda, H.5
  • 53
    • 0033955566 scopus 로고    scopus 로고
    • Transcription factors involved in pancreatic islet development
    • PMID: 10644886
    • Huang HP, Tsai MJ (2000) Transcription factors involved in pancreatic islet development. J Biomed Sci 7: 27-34. PMID: 10644886
    • (2000) J Biomed Sci , vol.7 , pp. 27-34
    • Huang, H.P.1    Tsai, M.J.2
  • 54
    • 0031843386 scopus 로고    scopus 로고
    • Mice lacking the homeodomain transcription factor Nkx2.2 have diabetes due to arrested differentiation of pancreatic beta cells
    • PMID: 9584121
    • Sussel L, Kalamaras J, Hartigan-O'Connor DJ, Meneses JJ, Pedersen RA, et al. (1998) Mice lacking the homeodomain transcription factor Nkx2.2 have diabetes due to arrested differentiation of pancreatic beta cells. Development 125: 2213-2221. PMID: 9584121
    • (1998) Development , vol.125 , pp. 2213-2221
    • Sussel, L.1    Kalamaras, J.2    Hartigan-O'Connor, D.J.3    Meneses, J.J.4    Pedersen, R.A.5
  • 55
    • 67349139275 scopus 로고    scopus 로고
    • Assessing the potential of glucokinase activators in diabetes therapy
    • PMID: 19373249
    • Matschinsky FM (2009) Assessing the potential of glucokinase activators in diabetes therapy. Nat Rev Drug Discov 8: 399-416. doi: 10.1038/nrd2850 PMID: 19373249
    • (2009) Nat Rev Drug Discov , vol.8 , pp. 399-416
    • Matschinsky, F.M.1
  • 56
    • 79955758359 scopus 로고    scopus 로고
    • Glucokinase inhibitor glucosamine stimulates feeding and activates hypothalamic neuropeptide Y and orexin neurons
    • PMID: 21440571
    • Zhou L, Yueh CY, Lam DD, Shaw J, Osundiji M, et al. (2011) Glucokinase inhibitor glucosamine stimulates feeding and activates hypothalamic neuropeptide Y and orexin neurons. Behavioural Brain Research 222: 274-278. doi: 10.1016/j.bbr.2011.03.043 PMID: 21440571
    • (2011) Behavioural Brain Research , vol.222 , pp. 274-278
    • Zhou, L.1    Yueh, C.Y.2    Lam, D.D.3    Shaw, J.4    Osundiji, M.5
  • 57
    • 79251469386 scopus 로고    scopus 로고
    • Vigilance and validation: Keys to success in RNAi screening
    • PMID: 21142076
    • Sigoillot FD, King RW (2011) Vigilance and validation: Keys to success in RNAi screening. ACS Chem Biol 6: 47-60. doi: 10.1021/cb100358f PMID: 21142076
    • (2011) ACS Chem Biol , vol.6 , pp. 47-60
    • Sigoillot, F.D.1    King, R.W.2
  • 58
    • 84859218649 scopus 로고    scopus 로고
    • A bioinformatics method identifies prominent off-targeted transcripts in RNAi screens
    • nmeth.1898 [pii] PMID: 22343343
    • Sigoillot FD, Lyman S, Huckins JF, Adamson B, Chung E, et al. (2012) A bioinformatics method identifies prominent off-targeted transcripts in RNAi screens. Nat Methods 9: 363-366. nmeth.1898 [pii]; doi: 10.1038/nmeth.1898 PMID: 22343343
    • (2012) Nat Methods , vol.9 , pp. 363-366
    • Sigoillot, F.D.1    Lyman, S.2    Huckins, J.F.3    Adamson, B.4    Chung, E.5
  • 59
    • 84859065278 scopus 로고    scopus 로고
    • Common seed analysis to identify off-target effects in siRNA screens
    • 1087057111427348 [pii] PMID: 22086724
    • Marine S, Bahl A, Ferrer M, Buehler E (2012) Common seed analysis to identify off-target effects in siRNA screens. J Biomol Screen 17: 370-378. 1087057111427348 [pii]; doi: 10.1177/1087057111427348 PMID: 22086724
    • (2012) J Biomol Screen , vol.17 , pp. 370-378
    • Marine, S.1    Bahl, A.2    Ferrer, M.3    Buehler, E.4
  • 60
    • 84861752176 scopus 로고    scopus 로고
    • siRNA off-target effects in genomewide screens identify signaling pathway members
    • PMID: 22645644
    • Buehler E, Khan AA, Marine S, Rajaram M, Bahl A, et al. (2012) siRNA off-target effects in genomewide screens identify signaling pathway members. Sci Rep 2: 428. doi: 10.1038/srep00428 PMID: 22645644
    • (2012) Sci Rep , vol.2 , pp. 428
    • Buehler, E.1    Khan, A.A.2    Marine, S.3    Rajaram, M.4    Bahl, A.5
  • 61
    • 84871265164 scopus 로고    scopus 로고
    • C911: A bench-level control for sequence specific siRNA off-target effects
    • PMID: 23251657
    • Buehler E, Chen YC, Martin S (2012) C911: A bench-level control for sequence specific siRNA off-target effects. PLoS One 7: e51942. doi: 10.1371/journal.pone.0051942 PMID: 23251657
    • (2012) PLoS One , vol.7 , pp. e51942
    • Buehler, E.1    Chen, Y.C.2    Martin, S.3
  • 62
    • 58149186477 scopus 로고    scopus 로고
    • PID: The Pathway Interaction Database
    • PMID: 18832364
    • Schaefer CF, Anthony K, Krupa S, Buchoff J, Day M, et al. (2009) PID: the Pathway Interaction Database. Nucleic Acids Res 37: D674-D679. doi: 10.1093/nar/gkn653 PMID: 18832364
    • (2009) Nucleic Acids Res , vol.37 , pp. D674-D679
    • Schaefer, C.F.1    Anthony, K.2    Krupa, S.3    Buchoff, J.4    Day, M.5
  • 63
    • 34250191844 scopus 로고    scopus 로고
    • Reactome: A knowledge base of biologic pathways and processes
    • PMID: 17367534
    • Vastrik I, D'Eustachio P, Schmidt E, Gopinath G, Croft D, et al. (2007) Reactome: a knowledge base of biologic pathways and processes. Genome Biol 8: R39. PMID: 17367534
    • (2007) Genome Biol , vol.8 , pp. R39
    • Vastrik, I.1    D'Eustachio, P.2    Schmidt, E.3    Gopinath, G.4    Croft, D.5
  • 64
    • 13444312083 scopus 로고    scopus 로고
    • The PANTHER database of protein families, subfamilies, functions and pathways
    • PMID: 15608197
    • Mi H, Lazareva-Ulitsky B, Loo R, Kejariwal A, Vandergriff J, et al. (2005) The PANTHER database of protein families, subfamilies, functions and pathways. Nucleic Acids Res 33: D284-D288. PMID: 15608197
    • (2005) Nucleic Acids Res , vol.33 , pp. D284-D288
    • Mi, H.1    Lazareva-Ulitsky, B.2    Loo, R.3    Kejariwal, A.4    Vandergriff, J.5
  • 65
    • 0034069495 scopus 로고    scopus 로고
    • Gene ontology: Tool for the unification of biology. The Gene Ontology Consortium
    • PMID: 10802651
    • Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, et al. (2000) Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet 25: 25-29. PMID: 10802651
    • (2000) Nat Genet , vol.25 , pp. 25-29
    • Ashburner, M.1    Ball, C.A.2    Blake, J.A.3    Botstein, D.4    Butler, H.5
  • 66
    • 33751435209 scopus 로고    scopus 로고
    • cPath: Open source software for collecting, storing, and querying biological pathways
    • PMID: 17101041
    • Cerami EG, Bader GD, Gross BE, Sander C (2006) cPath: open source software for collecting, storing, and querying biological pathways. BMC Bioinformatics 7: 497. PMID: 17101041
    • (2006) BMC Bioinformatics , vol.7 , pp. 497
    • Cerami, E.G.1    Bader, G.D.2    Gross, B.E.3    Sander, C.4
  • 67
    • 79952392088 scopus 로고    scopus 로고
    • TargetMine, an integrated data warehouse for candidate gene prioritisation and target discovery
    • PMID: 21408081
    • Chen YA, Tripathi LP, Mizuguchi K (2011) TargetMine, an integrated data warehouse for candidate gene prioritisation and target discovery. PLoS One 6: e17844. doi: 10.1371/journal.pone.0017844 PMID: 21408081
    • (2011) PLoS One , vol.6 , pp. e17844
    • Chen, Y.A.1    Tripathi, L.P.2    Mizuguchi, K.3
  • 68
    • 0037199968 scopus 로고    scopus 로고
    • Hierarchical organization of modularity in metabolic networks
    • PMID: 12202830
    • Ravasz E, Somera AL, Mongru DA, Oltvai ZN, Barabasi AL (2002) Hierarchical organization of modularity in metabolic networks. Science 297: 1551-1555. PMID: 12202830
    • (2002) Science , vol.297 , pp. 1551-1555
    • Ravasz, E.1    Somera, A.L.2    Mongru, D.A.3    Oltvai, Z.N.4    Barabasi, A.L.5
  • 69
    • 0037428479 scopus 로고    scopus 로고
    • Transcription factor occupancy of the insulin gene in vivo. Evidence for direct regulation by Nkx2.2
    • PMID: 12426319
    • Cissell MA, Zhao L, Sussel L, Henderson E, Stein R (2003) Transcription factor occupancy of the insulin gene in vivo. Evidence for direct regulation by Nkx2.2. J Biol Chem 278: 751-756. PMID: 12426319
    • (2003) J Biol Chem , vol.278 , pp. 751-756
    • Cissell, M.A.1    Zhao, L.2    Sussel, L.3    Henderson, E.4    Stein, R.5
  • 70
    • 0035980149 scopus 로고    scopus 로고
    • Insulin rescues retinal neurons from apoptosis by a phosphatidylinositol 3-kinase/Akt-mediated mechanism that reduces the activation of caspase-3
    • PMID: 11443130
    • Barber AJ, Nakamura M, Wolpert EB, Reiter CE, Seigel GM, et al. (2001) Insulin rescues retinal neurons from apoptosis by a phosphatidylinositol 3-kinase/Akt-mediated mechanism that reduces the activation of caspase-3. J Biol Chem 276: 32814-32821. PMID: 11443130
    • (2001) J Biol Chem , vol.276 , pp. 32814-32821
    • Barber, A.J.1    Nakamura, M.2    Wolpert, E.B.3    Reiter, C.E.4    Seigel, G.M.5
  • 71
    • 34249734831 scopus 로고    scopus 로고
    • Depletion of GGA3 stabilizes BACE and enhances beta-secretase activity
    • PMID: 17553422
    • Tesco G, Koh YH, Kang EL, Cameron AN, Das S, et al. (2007) Depletion of GGA3 stabilizes BACE and enhances beta-secretase activity. Neuron 54: 721-737. PMID: 17553422
    • (2007) Neuron , vol.54 , pp. 721-737
    • Tesco, G.1    Koh, Y.H.2    Kang, E.L.3    Cameron, A.N.4    Das, S.5
  • 72
    • 0035871641 scopus 로고    scopus 로고
    • Stimulation of beta-amyloid precursor protein trafficking by insulin reduces intraneuronal beta-amyloid and requires mitogen-activated protein kinase signaling
    • PMID: 11306609
    • Gasparini L, Gouras GK, Wang R, Gross RS, Beal MF, et al. (2001) Stimulation of beta-amyloid precursor protein trafficking by insulin reduces intraneuronal beta-amyloid and requires mitogen-activated protein kinase signaling. J Neurosci 21: 2561-2570. PMID: 11306609
    • (2001) J Neurosci , vol.21 , pp. 2561-2570
    • Gasparini, L.1    Gouras, G.K.2    Wang, R.3    Gross, R.S.4    Beal, M.F.5
  • 73
    • 0033617402 scopus 로고    scopus 로고
    • Involvement of caspases in proteolytic cleavage of Alzheimer's amyloid-beta precursor protein and amyloidogenic A beta peptide formation
    • PMID: 10319819
    • Gervais FG, Xu D, Robertson GS, Vaillancourt JP, Zhu Y, et al. (1999) Involvement of caspases in proteolytic cleavage of Alzheimer's amyloid-beta precursor protein and amyloidogenic A beta peptide formation. Cell 97: 395-406. PMID: 10319819
    • (1999) Cell , vol.97 , pp. 395-406
    • Gervais, F.G.1    Xu, D.2    Robertson, G.S.3    Vaillancourt, J.P.4    Zhu, Y.5
  • 74
    • 10744227070 scopus 로고    scopus 로고
    • Control of pancreas and liver gene expression by HNF transcription factors
    • PMID: 14988562
    • Odom DT, Zizlsperger N, Gordon DB, Bell GW, Rinaldi NJ, et al. (2004) Control of pancreas and liver gene expression by HNF transcription factors. Science 303: 1378-1381. PMID: 14988562
    • (2004) Science , vol.303 , pp. 1378-1381
    • Odom, D.T.1    Zizlsperger, N.2    Gordon, D.B.3    Bell, G.W.4    Rinaldi, N.J.5


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