-
1
-
-
0345071423
-
Genes duplicated by polyploidy show unequal contributions to the transcriptome and organ-specific reciprocal silencing
-
Adams, K.L., Cronn, R., Percifield, R., and Wendel, J.F. (2003). Genes duplicated by polyploidy show unequal contributions to the transcriptome and organ-specific reciprocal silencing. Proc. Natl. Acad. Sci. USA 100: 4649–4654.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 4649-4654
-
-
Adams, K.L.1
Cronn, R.2
Percifield, R.3
Wendel, J.F.4
-
2
-
-
79955910093
-
Evolution and metabolic significance of the urea cycle in photosynthetic diatoms
-
Allen, A.E., Dupont, C.L., Oborník, M., Horák, A., Nunes-Nesi, A., McCrow, J.P., Zheng, H., Johnson, D.A., Hu, H., Fernie, A.R., and Bowler, C. (2011). Evolution and metabolic significance of the urea cycle in photosynthetic diatoms. Nature 473: 203–207.
-
(2011)
Nature
, vol.473
, pp. 203-207
-
-
Allen, A.E.1
Dupont, C.L.2
Oborník, M.3
Horák, A.4
Nunes-Nesi, A.5
McCrow, J.P.6
Zheng, H.7
Johnson, D.A.8
Hu, H.9
Fernie, A.R.10
Bowler, C.11
-
3
-
-
6044252163
-
The genome of the diatom Thalassiosira pseudonana: Ecology, evolution, and metabolism
-
Armbrust, E.V., et al. (2004). The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Science 306: 79–86.
-
(2004)
Science
, vol.306
, pp. 79-86
-
-
Armbrust, E.V.1
-
4
-
-
80054838610
-
Genomic expression dominance in the natural allopolyploid Coffea arabica is massively affected by growth temperature
-
Bardil, A., de Almeida, J.D., Combes, M.C., Lashermes, P., and Bertrand, B. (2011). Genomic expression dominance in the natural allopolyploid Coffea arabica is massively affected by growth temperature. New Phytol. 192: 760–774.
-
(2011)
New Phytol
, vol.192
, pp. 760-774
-
-
Bardil, A.1
De Almeida, J.D.2
Combes, M.C.3
Lashermes, P.4
Bertrand, B.5
-
5
-
-
56249098614
-
The Phaeodactylum genome reveals the evolutionary history of diatom genomes
-
Bowler, C., et al. (2008). The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Nature 456: 239–244.
-
(2008)
Nature
, vol.456
, pp. 239-244
-
-
Bowler, C.1
-
6
-
-
0027160660
-
Regulation of the long-chain carnitine acyltransferases
-
Brady, P.S., Ramsay, R.R., and Brady, L.J. (1993). Regulation of the long-chain carnitine acyltransferases. FASEB J. 7: 1039–1044.
-
(1993)
FASEB J
, vol.7
, pp. 1039-1044
-
-
Brady, P.S.1
Ramsay, R.R.2
Brady, L.J.3
-
7
-
-
67650888375
-
Reciprocal silencing, transcriptional bias and functional divergence of homeologs in polyploid cotton (Gossypium)
-
Chaudhary, B., Flagel, L., Stupar, R.M., Udall, J.A., Verma, N., Springer, N.M., and Wendel, J.F. (2009). Reciprocal silencing, transcriptional bias and functional divergence of homeologs in polyploid cotton (Gossypium). Genetics 182: 503–517.
-
(2009)
Genetics
, vol.182
, pp. 503-517
-
-
Chaudhary, B.1
Flagel, L.2
Stupar, R.M.3
Udall, J.A.4
Verma, N.5
Springer, N.M.6
Wendel, J.F.7
-
8
-
-
43149098999
-
GFP-based optimization scheme for the over-expression and purification of eukaryotic membrane proteins in Saccharomyces cerevisiae
-
Drew, D., Newstead, S., Sonoda, Y., Kim, H., von Heijne, G., and Iwata, S. (2008). GFP-based optimization scheme for the over-expression and purification of eukaryotic membrane proteins in Saccharomyces cerevisiae. Nat. Protoc. 3: 784–798.
-
(2008)
Nat. Protoc
, vol.3
, pp. 784-798
-
-
Drew, D.1
Newstead, S.2
Sonoda, Y.3
Kim, H.4
Von Heijne, G.5
Iwata, S.6
-
9
-
-
69249203617
-
Use of the dinoflagellate Karlodinium veneficum as a sustainable source of biodiesel production
-
Fuentes-Grünewald, C., Garcés, E., Rossi, S., and Camp, J. (2009). Use of the dinoflagellate Karlodinium veneficum as a sustainable source of biodiesel production. J. Ind. Microbiol. Biotechnol. 36: 1215–1224.
-
(2009)
J. Ind. Microbiol. Biotechnol
, vol.36
, pp. 1215-1224
-
-
Fuentes-Grünewald, C.1
Garcés, E.2
Rossi, S.3
Camp, J.4
-
10
-
-
0036624692
-
A simple combined method for determination of beta-1,3-glucan and cell wall polysaccharides in diatoms
-
Granum, E., and Myklestad, S.M. (2002). A simple combined method for determination of beta-1,3-glucan and cell wall polysaccharides in diatoms. Hydrobiologia 477: 155–161.
-
(2002)
Hydrobiologia
, vol.477
, pp. 155-161
-
-
Granum, E.1
Myklestad, S.M.2
-
11
-
-
80054728497
-
Examination of triacylglycerol biosynthetic pathways via de novo transcriptomic and proteomic analyses in an unsequenced microalga
-
Guarnieri, M.T., Nag, A., Smolinski, S.L., Darzins, A., Seibert, M., and Pienkos, P.T. (2011). Examination of triacylglycerol biosynthetic pathways via de novo transcriptomic and proteomic analyses in an unsequenced microalga. PLoS ONE 6: e25851.
-
(2011)
Plos ONE
, vol.6
-
-
Guarnieri, M.T.1
Nag, A.2
Smolinski, S.L.3
Darzins, A.4
Seibert, M.5
Pienkos, P.T.6
-
12
-
-
73049174685
-
Studies of marine planktonic diatoms. I. Cyclotella nana Hustedt, and Detonula confervacea (cleve) Gran
-
Guillard, R.R., and Ryther, J.H. (1962). Studies of marine planktonic diatoms. I. Cyclotella nana Hustedt, and Detonula confervacea (cleve) Gran. Can. J. Microbiol. 8: 229–239.
-
(1962)
Can. J. Microbiol
, vol.8
, pp. 229-239
-
-
Guillard, R.R.1
Ryther, J.H.2
-
13
-
-
77953826984
-
-
PhD dissertation (University Park, PA: The Pennsylvania State University)
-
Harris, R.S. (2007). Improved Pairwise Alignment of Genomic DNA. PhD dissertation (University Park, PA: The Pennsylvania State University).
-
(2007)
Improved Pairwise Alignment of Genomic DNA
-
-
Harris, R.S.1
-
14
-
-
0028068689
-
Allodiploid nature of Allium wakegi Araki revealed by genomic in situ hybridization and localization of 5S and 18S rDNAs
-
Hizume, M. (1994). Allodiploid nature of Allium wakegi Araki revealed by genomic in situ hybridization and localization of 5S and 18S rDNAs. Jpn. J. Genet. 69: 407–415.
-
(1994)
Jpn. J. Genet
, vol.69
, pp. 407-415
-
-
Hizume, M.1
-
15
-
-
77957298125
-
Genome-wide expression analysis of Saccharomyces pastorianus orthologous genes using oligonucleotide microarrays
-
Horinouchi, T., Yoshikawa, K., Kawaide, R., Furusawa, C., Nakao, Y., Hirasawa, T., and Shimizu, H. (2010). Genome-wide expression analysis of Saccharomyces pastorianus orthologous genes using oligonucleotide microarrays. J. Biosci. Bioeng. 110: 602–607.
-
(2010)
J. Biosci. Bioeng
, vol.110
, pp. 602-607
-
-
Horinouchi, T.1
Yoshikawa, K.2
Kawaide, R.3
Furusawa, C.4
Nakao, Y.5
Hirasawa, T.6
Shimizu, H.7
-
16
-
-
0028605851
-
Cloning and sequence of the SCS3 gene which is required for inositol prototrophy in Saccharomyces cerevisiae
-
Hosaka, K., Nikawa, J., Kodaki, T., Ishizu, H., and Yamashita, S. (1994). Cloning and sequence of the SCS3 gene which is required for inositol prototrophy in Saccharomyces cerevisiae. J. Biochem. 116: 1317–1321.
-
(1994)
J. Biochem
, vol.116
, pp. 1317-1321
-
-
Hosaka, K.1
Nikawa, J.2
Kodaki, T.3
Ishizu, H.4
Yamashita, S.5
-
17
-
-
67649933548
-
High-density microcavity array for cell detection: Single-cell analysis of hematopoietic stem cells in peripheral blood mononuclear cells
-
Hosokawa, M., Arakaki, A., Takahashi, M., Mori, T., Takeyama, H., and Matsunaga, T. (2009). High-density microcavity array for cell detection: single-cell analysis of hematopoietic stem cells in peripheral blood mononuclear cells. Anal. Chem. 81: 5308–5313.
-
(2009)
Anal. Chem
, vol.81
, pp. 5308-5313
-
-
Hosokawa, M.1
Arakaki, A.2
Takahashi, M.3
Mori, T.4
Takeyama, H.5
Matsunaga, T.6
-
18
-
-
84862824414
-
Leukocyte counting from a small amount of whole blood using a size-controlled microcavity array
-
Hosokawa, M., Asami, M., Nakamura, S., Yoshino, T., Tsujimura, N., Takahashi, M., Nakasono, S., Tanaka, T., and Matsunaga, T. (2012). Leukocyte counting from a small amount of whole blood using a size-controlled microcavity array. Biotechnol. Bioeng. 109: 2017–2024.
-
(2012)
Biotechnol. Bioeng
, vol.109
, pp. 2017-2024
-
-
Hosokawa, M.1
Asami, M.2
Nakamura, S.3
Yoshino, T.4
Tsujimura, N.5
Takahashi, M.6
Nakasono, S.7
Tanaka, T.8
Matsunaga, T.9
-
19
-
-
44949272730
-
A time-efficient, linear-space local similarity algorithm
-
Huang, X., and Miller, W. (1991). A time-efficient, linear-space local similarity algorithm. Adv. Appl. Math. 12: 337–357.
-
(1991)
Adv. Appl. Math
, vol.12
, pp. 337-357
-
-
Huang, X.1
Miller, W.2
-
20
-
-
77949471570
-
Genome-wide analysis of the diatom cell cycle unveils a novel type of cyclins involved in environmental signaling
-
Huysman, M.J., Martens, C., Vandepoele, K., Gillard, J., Rayko, E., Heijde, M., Bowler, C., Inzé, D., Van de Peer, Y., De Veylder, L., and Vyverman, W. (2010). Genome-wide analysis of the diatom cell cycle unveils a novel type of cyclins involved in environmental signaling. Genome Biol. 11: R17.
-
(2010)
Genome Biol
, vol.11
, pp. R17
-
-
Huysman, M.J.1
Martens, C.2
Vandepoele, K.3
Gillard, J.4
Rayko, E.5
Heijde, M.6
Bowler, C.7
Inzé, D.8
Van De Peer, Y.9
De Veylder, L.10
Vyverman, W.11
-
21
-
-
38349127584
-
Evolutionarily conserved gene family important for fat storage
-
Kadereit, B., Kumar, P., Wang, W.J., Miranda, D., Snapp, E.L., Severina, N., Torregroza, I., Evans, T., and Silver, D.L. (2008). Evolutionarily conserved gene family important for fat storage. Proc. Natl. Acad. Sci. USA 105: 94–99.
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 94-99
-
-
Kadereit, B.1
Kumar, P.2
Wang, W.J.3
Miranda, D.4
Snapp, E.L.5
Severina, N.6
Torregroza, I.7
Evans, T.8
Silver, D.L.9
-
22
-
-
20844451123
-
AMP-activated protein kinase: Ancient energy gauge provides clues to modern understanding of metabolism
-
Kahn, B.B., Alquier, T., Carling, D., and Hardie, D.G. (2005). AMP-activated protein kinase: ancient energy gauge provides clues to modern understanding of metabolism. Cell Metab. 1: 15–25.
-
(2005)
Cell Metab
, vol.1
, pp. 15-25
-
-
Kahn, B.B.1
Alquier, T.2
Carling, D.3
Hardie, D.G.4
-
23
-
-
33947362927
-
Lager brewing yeast
-
P. Sunnerhagen and J. Piškur, eds (Berlin: Springer
-
Kodama, Y., Kielland-Brandt, M.C., and Hansen, J. (2006). Lager brewing yeast. In Comparative Genomics, Topics in Current Genetics, Vol. 15, P. Sunnerhagen and J. Piškur, eds (Berlin: Springer), pp. 145–164.
-
(2006)
Comparative Genomics, Topics in Current Genetics
, vol.15
, pp. 145-164
-
-
Kodama, Y.1
Kielland-Brandt, M.C.2
Hansen, J.3
-
24
-
-
38949120916
-
A model for carbohydrate metabolism in the diatom Phaeodactylum tricornutum deduced from comparative whole genome analysis
-
Kroth, P.G., et al. (2008). A model for carbohydrate metabolism in the diatom Phaeodactylum tricornutum deduced from comparative whole genome analysis. PLoS ONE 3: e1426.
-
(2008)
Plos ONE
, vol.3
-
-
Kroth, P.G.1
-
25
-
-
2942538300
-
Versatile and open software for comparing large genomes
-
Kurtz, S., Phillippy, A., Delcher, A.L., Smoot, M., Shumway, M., Antonescu, C., and Salzberg, S.L. (2004). Versatile and open software for comparing large genomes. Genome Biol. 5: R12.
-
(2004)
Genome Biol
, vol.5
, pp. R12
-
-
Kurtz, S.1
Phillippy, A.2
Delcher, A.L.3
Smoot, M.4
Shumway, M.5
Antonescu, C.6
Salzberg, S.L.7
-
26
-
-
62349130698
-
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
-
Langmead, B., Trapnell, C., Pop, M., and Salzberg, S.L. (2009). Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol. 10: R25.
-
(2009)
Genome Biol
, vol.10
, pp. R25
-
-
Langmead, B.1
Trapnell, C.2
Pop, M.3
Salzberg, S.L.4
-
27
-
-
42549129942
-
Genomic plasticity and the diversity of polyploid plants
-
Leitch, A.R., and Leitch, I.J. (2008). Genomic plasticity and the diversity of polyploid plants. Science 320: 481–483.
-
(2008)
Science
, vol.320
, pp. 481-483
-
-
Leitch, A.R.1
Leitch, I.J.2
-
28
-
-
84871859007
-
A galactoglycerolipid lipase is required for triacylglycerol accumulation and survival following nitrogen deprivation in Chlamydomonas reinhardtii
-
Li, X., Moellering, E.R., Liu, B., Johnny, C., Fedewa, M., Sears, B.B., Kuo, M.H., and Benning, C. (2012). A galactoglycerolipid lipase is required for triacylglycerol accumulation and survival following nitrogen deprivation in Chlamydomonas reinhardtii. Plant Cell 24: 4670–4686.
-
(2012)
Plant Cell
, vol.24
, pp. 4670-4686
-
-
Li, X.1
Moellering, E.R.2
Liu, B.3
Johnny, C.4
Fedewa, M.5
Sears, B.B.6
Kuo, M.H.7
Benning, C.8
-
29
-
-
57249095894
-
Effects of nitrogen sources on cell growth and lipid accumulation of green alga Neochloris oleoabundans
-
Li, Y., Horsman, M., Wang, B., Wu, N., and Lan, C.Q. (2008). Effects of nitrogen sources on cell growth and lipid accumulation of green alga Neochloris oleoabundans. Appl. Microbiol. Biotechnol. 81: 629–636.
-
(2008)
Appl. Microbiol. Biotechnol
, vol.81
, pp. 629-636
-
-
Li, Y.1
Horsman, M.2
Wang, B.3
Wu, N.4
Lan, C.Q.5
-
30
-
-
84893697438
-
Profiling of fatty acid methyl esters from the oleaginous diatom Fistulifera sp. Strain JPCC DA0580 under nutrition-sufficient and -deficient conditions
-
Liang, Y., Yoshino, T., Maeda, Y., Tanaka, M., Matsumoto, M., and Tanaka, T. (2015). Profiling of fatty acid methyl esters from the oleaginous diatom Fistulifera sp. strain JPCC DA0580 under nutrition-sufficient and -deficient conditions. J. Appl. Phycol., http://dx.doi.org/10.1007/s10811-014-0265-y.
-
(2015)
J. Appl. Phycol
-
-
Liang, Y.1
Yoshino, T.2
Maeda, Y.3
Tanaka, M.4
Matsumoto, M.5
Tanaka, T.6
-
31
-
-
84860499250
-
Pichia sorbitophila, an interspecies yeast hybrid, reveals early steps of genome resolution after polyploidization
-
Louis, V.L., et al. (2012). Pichia sorbitophila, an interspecies yeast hybrid, reveals early steps of genome resolution after polyploidization. G3 (Bethesda) 2: 299–311.
-
(2012)
G3 (Bethesda)
, vol.2
, pp. 299-311
-
-
Louis, V.L.1
-
32
-
-
84877586615
-
Euglena sp. As a suitable source of lipids for potential use as biofuel and sustainable wastewater treatment
-
Mahapatra, D.M., Chanakya, H., and Ramachandra, T. (2013). Euglena sp. as a suitable source of lipids for potential use as biofuel and sustainable wastewater treatment. J. Appl. Phycol. 25: 855–865.
-
(2013)
J. Appl. Phycol
, vol.25
, pp. 855-865
-
-
Mahapatra, D.M.1
Chanakya, H.2
Ramachandra, T.3
-
33
-
-
77953006433
-
Marine diatom, Navicula sp. Strain JPCC DA0580 and marine green alga, Chlorella sp. strain NKG400014 as potential sources for biodiesel production
-
Matsumoto, M., Sugiyama, H., Maeda, Y., Sato, R., Tanaka, T., and Matsunaga, T. (2010). Marine diatom, Navicula sp. strain JPCC DA0580 and marine green alga, Chlorella sp. strain NKG400014 as potential sources for biodiesel production. Appl. Biochem. Biotechnol. 161: 483–490.
-
(2010)
Appl. Biochem. Biotechnol
, vol.161
, pp. 483-490
-
-
Matsumoto, M.1
Sugiyama, H.2
Maeda, Y.3
Sato, R.4
Tanaka, T.5
Matsunaga, T.6
-
34
-
-
84903537395
-
Morphological and molecular phylogenetic analysis of the high triglyceride-producing marine diatom, Fistulifera solaris sp. Nov. (Bacillariophyceae)
-
Matsumoto, M., Mayama, S., Nemoto, M., Fukuda, Y., Muto, M., Yoshino, T., Matsunaga, T., and Tanaka, T. (2014). Morphological and molecular phylogenetic analysis of the high triglyceride-producing marine diatom, Fistulifera solaris sp. nov. (Bacillariophyceae). Phycol. Res. 62: 257–268.
-
(2014)
Phycol. Res
, vol.62
, pp. 257-268
-
-
Matsumoto, M.1
Mayama, S.2
Nemoto, M.3
Fukuda, Y.4
Muto, M.5
Yoshino, T.6
Matsunaga, T.7
Tanaka, T.8
-
35
-
-
74549184086
-
Potential impact of stress activated retrotransposons on genome evolution in a marine diatom
-
Maumus, F., Allen, A.E., Mhiri, C., Hu, H., Jabbari, K., Vardi, A., Grandbastien, M.A., and Bowler, C. (2009). Potential impact of stress activated retrotransposons on genome evolution in a marine diatom. BMC Genomics 10: 624.
-
(2009)
BMC Genomics
, vol.10
, pp. 624
-
-
Maumus, F.1
Allen, A.E.2
Mhiri, C.3
Hu, H.4
Jabbari, K.5
Vardi, A.6
Grandbastien, M.A.7
Bowler, C.8
-
36
-
-
78649786133
-
Changes in transcript abundance in Chlamydomonas reinhardtii following nitrogen deprivation predict diversion of metabolism
-
Miller, R., et al. (2010). Changes in transcript abundance in Chlamydomonas reinhardtii following nitrogen deprivation predict diversion of metabolism. Plant Physiol. 154: 1737–1752.
-
(2010)
Plant Physiol
, vol.154
, pp. 1737-1752
-
-
Miller, R.1
-
37
-
-
84870698548
-
Evolutionary role of interspecies hybridization and genetic exchanges in yeasts
-
Morales, L., and Dujon, B. (2012). Evolutionary role of interspecies hybridization and genetic exchanges in yeasts. Microbiol. Mol. Biol. Rev. 76: 721–739.
-
(2012)
Microbiol. Mol. Biol. Rev
, vol.76
, pp. 721-739
-
-
Morales, L.1
Dujon, B.2
-
38
-
-
46249106990
-
Mapping and quantifying mammalian transcriptomes by RNA-Seq
-
Mortazavi, A., Williams, B.A., McCue, K., Schaeffer, L., and Wold, B. (2008). Mapping and quantifying mammalian transcriptomes by RNA-Seq. Nat. Methods 5: 621–628.
-
(2008)
Nat. Methods
, vol.5
, pp. 621-628
-
-
Mortazavi, A.1
Williams, B.A.2
McCue, K.3
Schaeffer, L.4
Wold, B.5
-
39
-
-
84871671171
-
Establishment of a genetic transformation system for the marine pennate diatom Fistulifera sp. Strain JPCC DA0580— a high triglyceride producer
-
Muto, M., Fukuda, Y., Nemoto, M., Yoshino, T., Matsunaga, T., and Tanaka, T. (2013a). Establishment of a genetic transformation system for the marine pennate diatom Fistulifera sp. strain JPCC DA0580— a high triglyceride producer. Mar. Biotechnol. (NY) 15: 48–55.
-
(2013)
Mar. Biotechnol. (NY)
, vol.15
, pp. 48-55
-
-
Muto, M.1
Fukuda, Y.2
Nemoto, M.3
Yoshino, T.4
Matsunaga, T.5
Tanaka, T.6
-
40
-
-
84883497872
-
Identification and functional analysis of delta-9 desaturase, a key enzyme in PUFA Synthesis, isolated from the oleaginous diatom Fistulifera
-
Muto, M., Kubota, C., Tanaka, M., Satoh, A., Matsumoto, M., Yoshino, T., and Tanaka, T. (2013b). Identification and functional analysis of delta-9 desaturase, a key enzyme in PUFA Synthesis, isolated from the oleaginous diatom Fistulifera. PLoS ONE 8: e73507.
-
(2013)
Plos ONE
, vol.8
-
-
Muto, M.1
Kubota, C.2
Tanaka, M.3
Satoh, A.4
Matsumoto, M.5
Yoshino, T.6
Tanaka, T.7
-
41
-
-
84874821421
-
The first symbiont-free genome sequence of marine red alga, Susabi-nori (Pyropia yezoensis)
-
Nakamura, Y., et al. (2013). The first symbiont-free genome sequence of marine red alga, Susabi-nori (Pyropia yezoensis). PLoS ONE 8: e57122.
-
(2013)
Plos ONE
, vol.8
-
-
Nakamura, Y.1
-
42
-
-
67649602562
-
Genome sequence of the lager brewing yeast, an interspecies hybrid
-
Nakao, Y., Kanamori, T., Itoh, T., Kodama, Y., Rainieri, S., Nakamura, N., Shimonaga, T., Hattori, M., and Ashikari, T. (2009). Genome sequence of the lager brewing yeast, an interspecies hybrid. DNA Res. 16: 115–129.
-
(2009)
DNA Res
, vol.16
, pp. 115-129
-
-
Nakao, Y.1
Kanamori, T.2
Itoh, T.3
Kodama, Y.4
Rainieri, S.5
Nakamura, N.6
Shimonaga, T.7
Hattori, M.8
Ashikari, T.9
-
43
-
-
84922217575
-
Identification of a frustule-associated protein of the marine pennate diatom Fistulifera sp. Strain JPCC DA0580
-
Nemoto, M., Maeda, Y., Muto, M., Tanaka, M., Yoshino, T., Mayama, S., and Tanaka, T. (2014). Identification of a frustule-associated protein of the marine pennate diatom Fistulifera sp. strain JPCC DA0580. Mar. Genomics 16: 39–44.
-
(2014)
Mar. Genomics
, vol.16
, pp. 39-44
-
-
Nemoto, M.1
Maeda, Y.2
Muto, M.3
Tanaka, M.4
Yoshino, T.5
Mayama, S.6
Tanaka, T.7
-
44
-
-
70449553270
-
Lipid production in Porphyridium cruentum grown under different culture conditions
-
Oh, S.H., et al. (2009). Lipid production in Porphyridium cruentum grown under different culture conditions. J. Biosci. Bioeng. 108: 429–434.
-
(2009)
J. Biosci. Bioeng
, vol.108
, pp. 429-434
-
-
Oh, S.H.1
-
45
-
-
79953318145
-
Complex repeat structures and novel features in the mitochondrial genomes of the diatoms Phaeodactylum tricornutum and Thalassiosira pseudonana
-
Oudot-Le Secq, M.P., and Green, B.R. (2011). Complex repeat structures and novel features in the mitochondrial genomes of the diatoms Phaeodactylum tricornutum and Thalassiosira pseudonana. Gene 476: 20–26.
-
(2011)
Gene
, vol.476
, pp. 20-26
-
-
Oudot-Le Secq, M.P.1
Green, B.R.2
-
46
-
-
77950959077
-
Impact of transposable elements on the organization and function of allopolyploid genomes
-
Parisod, C., Alix, K., Just, J., Petit, M., Sarilar, V., Mhiri, C., Ainouche, M., Chalhoub, B., and Grandbastien, M.A. (2010). Impact of transposable elements on the organization and function of allopolyploid genomes. New Phytol. 186: 37–45.
-
(2010)
New Phytol
, vol.186
, pp. 37-45
-
-
Parisod, C.1
Alix, K.2
Just, J.3
Petit, M.4
Sarilar, V.5
Mhiri, C.6
Ainouche, M.7
Chalhoub, B.8
Grandbastien, M.A.9
-
47
-
-
0035228759
-
Analysis of strain and regional variation in gene expression in mouse brain
-
RESEARCH0042
-
Pavlidis, P., and Noble, W.S. (2001). Analysis of strain and regional variation in gene expression in mouse brain. Genome Biol. 2: RESEARCH0042.
-
(2001)
Genome Biol
, vol.2
-
-
Pavlidis, P.1
Noble, W.S.2
-
48
-
-
84896499814
-
Evolution of galactoglycerolipid bio-synthetic pathways—from cyanobacteria to primary plastids and from primary to secondary plastids
-
Petroutsos, D., et al. (2014). Evolution of galactoglycerolipid bio-synthetic pathways—from cyanobacteria to primary plastids and from primary to secondary plastids. Prog. Lipid Res. 54: 68–85.
-
(2014)
Prog. Lipid Res
, vol.54
, pp. 68-85
-
-
Petroutsos, D.1
-
49
-
-
67651050121
-
Parental squabbles and genome expression: Lessons from the polyploids
-
Pignatta, D., and Comai, L. (2009). Parental squabbles and genome expression: lessons from the polyploids. J. Biol. 8: 43.
-
(2009)
J. Biol
, vol.8
, pp. 43
-
-
Pignatta, D.1
Comai, L.2
-
50
-
-
84860440902
-
Neochloris oleoabundans grown in enriched natural seawater for biodiesel feedstock: Evaluation of its growth and biochemical composition
-
Popovich, C.A., Damiani, C., Constenla, D., Martínez, A.M., Freije, H., Giovanardi, M., Pancaldi, S., and Leonardi, P.I. (2012). Neochloris oleoabundans grown in enriched natural seawater for biodiesel feedstock: evaluation of its growth and biochemical composition. Bioresour. Technol. 114: 287–293.
-
(2012)
Bioresour. Technol
, vol.114
, pp. 287-293
-
-
Popovich, C.A.1
Damiani, C.2
Constenla, D.3
Martínez, A.M.4
Freije, H.5
Giovanardi, M.6
Pancaldi, S.7
Leonardi, P.I.8
-
51
-
-
84856231118
-
Influence of nutrient deprivations on lipid accumulation in a dominant indigenous microalga Chlorella sp., BUM11008: Evaluation for biodiesel production
-
Praveenkumar, R., Shameera, K., Mahalakshmi, G., Akbarsha, M.A., and Thajuddin, N. (2012). Influence of nutrient deprivations on lipid accumulation in a dominant indigenous microalga Chlorella sp., BUM11008: Evaluation for biodiesel production. Biomass Bio-energy 37: 60–66.
-
(2012)
Biomass Bio-Energy
, vol.37
, pp. 60-66
-
-
Praveenkumar, R.1
Shameera, K.2
Mahalakshmi, G.3
Akbarsha, M.A.4
Thajuddin, N.5
-
52
-
-
84857701617
-
Draft genome sequence and genetic transformation of the oleaginous alga Nannochloropis gaditana
-
Radakovits, R., Jinkerson, R.E., Fuerstenberg, S.I., Tae, H., Settlage, R.E., Boore, J.L., and Posewitz, M.C. (2012). Draft genome sequence and genetic transformation of the oleaginous alga Nannochloropis gaditana. Nat. Commun. 3: 686.
-
(2012)
Nat. Commun
, vol.3
, pp. 686
-
-
Radakovits, R.1
Jinkerson, R.E.2
Fuerstenberg, S.I.3
Tae, H.4
Settlage, R.E.5
Boore, J.L.6
Posewitz, M.C.7
-
53
-
-
77956296415
-
Transcription factor families inferred from genome sequences of photosynthetic stramenopiles
-
Rayko, E., Maumus, F., Maheswari, U., Jabbari, K., and Bowler, C. (2010). Transcription factor families inferred from genome sequences of photosynthetic stramenopiles. New Phytol. 188: 52–66.
-
(2010)
New Phytol
, vol.188
, pp. 52-66
-
-
Rayko, E.1
Maumus, F.2
Maheswari, U.3
Jabbari, K.4
Bowler, C.5
-
54
-
-
0242285657
-
Effects of reunited diverged regulatory hierarchies in allopolyploids and species hybrids
-
Riddle, N.C., and Birchler, J.A. (2003). Effects of reunited diverged regulatory hierarchies in allopolyploids and species hybrids. Trends Genet. 19: 597–600.
-
(2003)
Trends Genet
, vol.19
, pp. 597-600
-
-
Riddle, N.C.1
Birchler, J.A.2
-
55
-
-
84866498955
-
Transcriptomic analysis of the oleaginous microalga Neochloris oleoabundans reveals metabolic insights into triacylglyceride accumulation
-
Rismani-Yazdi, H., Haznedaroglu, B.Z., Hsin, C., and Peccia, J. (2012). Transcriptomic analysis of the oleaginous microalga Neochloris oleoabundans reveals metabolic insights into triacylglyceride accumulation. Biotechnol. Biofuels 5: 74.
-
(2012)
Biotechnol. Biofuels
, vol.5
, pp. 74
-
-
Rismani-Yazdi, H.1
Haznedaroglu, B.Z.2
Hsin, C.3
Peccia, J.4
-
56
-
-
58149269804
-
Microalgae for oil: Strain selection, induction of lipid synthesis and outdoor mass cultivation in a low-cost photobioreactor
-
Rodolfi, L., Chini Zittelli, G., Bassi, N., Padovani, G., Biondi, N., Bonini, G., and Tredici, M.R. (2009). Microalgae for oil: strain selection, induction of lipid synthesis and outdoor mass cultivation in a low-cost photobioreactor. Biotechnol. Bioeng. 102: 100–112.
-
(2009)
Biotechnol. Bioeng
, vol.102
, pp. 100-112
-
-
Rodolfi, L.1
Chini Zittelli, G.2
Bassi, N.3
Padovani, G.4
Biondi, N.5
Bonini, G.6
Tredici, M.R.7
-
57
-
-
0028304882
-
Characteristics of the gene that encodes acetyl-CoA carboxylase in the diatom Cyclotella cryptica
-
Roessler, P.G., Bleibaum, J.L., Thompson, G.A., and Ohlrogge, J.B. (1994). Characteristics of the gene that encodes acetyl-CoA carboxylase in the diatom Cyclotella cryptica. Ann. N. Y. Acad. Sci. 721: 250–256.
-
(1994)
Ann. N. Y. Acad. Sci
, vol.721
, pp. 250-256
-
-
Roessler, P.G.1
Bleibaum, J.L.2
Thompson, G.A.3
Ohlrogge, J.B.4
-
58
-
-
84899657474
-
Seasonal variation of biomass and oil production of the oleaginous diatom Fistulifera sp. In outdoor vertical bubble column and raceway-type bioreactors
-
Sato, R., Maeda, Y., Yoshino, T., Tanaka, T., and Matsumoto, M. (2014). Seasonal variation of biomass and oil production of the oleaginous diatom Fistulifera sp. in outdoor vertical bubble column and raceway-type bioreactors. J. Biosci. Bioeng. 117: 720–724.
-
(2014)
J. Biosci. Bioeng
, vol.117
, pp. 720-724
-
-
Sato, R.1
Maeda, Y.2
Yoshino, T.3
Tanaka, T.4
Matsumoto, M.5
-
59
-
-
84876305773
-
A process design and productivity evaluation for oil production by indoor mass cultivation of a marine diatom, Fistulifera sp. JPCC DA0580
-
Satoh, A., Ichii, K., Matsumoto, M., Kubota, C., Nemoto, M., Tanaka, M., Yoshino, T., Matsunaga, T., and Tanaka, T. (2013). A process design and productivity evaluation for oil production by indoor mass cultivation of a marine diatom, Fistulifera sp. JPCC DA0580. Bioresour. Technol. 137: 132–138.
-
(2013)
Bioresour. Technol
, vol.137
, pp. 132-138
-
-
Satoh, A.1
Ichii, K.2
Matsumoto, M.3
Kubota, C.4
Nemoto, M.5
Tanaka, M.6
Yoshino, T.7
Matsunaga, T.8
Tanaka, T.9
-
60
-
-
84881662482
-
Oil palm genome sequence reveals divergence of interfertile species in Old and New worlds
-
Singh, R., et al. (2013). Oil palm genome sequence reveals divergence of interfertile species in Old and New worlds. Nature 500: 335–339.
-
(2013)
Nature
, vol.500
, pp. 335-339
-
-
Singh, R.1
-
61
-
-
54049096710
-
Interspecies hybridization and recombination in Saccharomyces wine yeasts
-
Sipiczki, M. (2008). Interspecies hybridization and recombination in Saccharomyces wine yeasts. FEMS Yeast Res. 8: 996–1007.
-
(2008)
FEMS Yeast Res
, vol.8
, pp. 996-1007
-
-
Sipiczki, M.1
-
62
-
-
79955002712
-
Draft genome of the red harvester ant Pogonomyrmex barbatus
-
Smith, C.R., et al. (2011). Draft genome of the red harvester ant Pogonomyrmex barbatus. Proc. Natl. Acad. Sci. USA 108: 5667–5672.
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 5667-5672
-
-
Smith, C.R.1
-
63
-
-
77950622320
-
The ecology of algal biodiesel production
-
Smith, V.H., Sturm, B.S., Denoyelles, F.J., and Billings, S.A. (2010). The ecology of algal biodiesel production. Trends Ecol. Evol. (Amst.) 25: 301–309.
-
(2010)
Trends Ecol. Evol. (Amst.)
, vol.25
, pp. 301-309
-
-
Smith, V.H.1
Sturm, B.S.2
Denoyelles, F.J.3
Billings, S.A.4
-
64
-
-
84923045343
-
Chloroplast-targeting protein expression in the oleaginous diatom Fistulifera solaris JPCC DA0580 toward metabolic engineering
-
Sunaga, Y., Maeda, Y., Yabuuchi, T., Muto, M., Yoshino, T., and Tanaka, T. (2015). Chloroplast-targeting protein expression in the oleaginous diatom Fistulifera solaris JPCC DA0580 toward metabolic engineering. J. Biosci. Bioeng. 119: 28–34.
-
(2015)
J. Biosci. Bioeng
, vol.119
, pp. 28-34
-
-
Sunaga, Y.1
Maeda, Y.2
Yabuuchi, T.3
Muto, M.4
Yoshino, T.5
Tanaka, T.6
-
65
-
-
84856969504
-
High-throughput pyrosequencing of the chloroplast genome of a highly neutral-lipid-producing marine pennate diatom, Fistulifera sp. Strain JPCC DA0580
-
Tanaka, T., Fukuda, Y., Yoshino, T., Maeda, Y., Muto, M., Matsumoto, M., Mayama, S., and Matsunaga, T. (2011). High-throughput pyrosequencing of the chloroplast genome of a highly neutral-lipid-producing marine pennate diatom, Fistulifera sp. strain JPCC DA0580. Photosynth. Res. 109: 223–229.
-
(2011)
Photosynth. Res
, vol.109
, pp. 223-229
-
-
Tanaka, T.1
Fukuda, Y.2
Yoshino, T.3
Maeda, Y.4
Muto, M.5
Matsumoto, M.6
Mayama, S.7
Matsunaga, T.8
-
66
-
-
0037008886
-
Long chain polyunsaturated fatty acid production and partitioning to tri-acylglycerols in four microalgae
-
Tonon, T., Harvey, D., Larson, T.R., and Graham, I.A. (2002). Long chain polyunsaturated fatty acid production and partitioning to tri-acylglycerols in four microalgae. Phytochemistry 61: 15–24.
-
(2002)
Phytochemistry
, vol.61
, pp. 15-24
-
-
Tonon, T.1
Harvey, D.2
Larson, T.R.3
Graham, I.A.4
-
67
-
-
84861829358
-
Potential role of multiple carbon fixation pathways during lipid accumulation in Phaeodactylum tricornutum
-
Valenzuela, J., Mazurie, A., Carlson, R.P., Gerlach, R., Cooksey, K.E., Peyton, B.M., and Fields, M.W. (2012). Potential role of multiple carbon fixation pathways during lipid accumulation in Phaeodactylum tricornutum. Biotechnol. Biofuels 5: 40.
-
(2012)
Biotechnol. Biofuels
, vol.5
, pp. 40
-
-
Valenzuela, J.1
Mazurie, A.2
Carlson, R.P.3
Gerlach, R.4
Cooksey, K.E.5
Peyton, B.M.6
Fields, M.W.7
-
68
-
-
84860005565
-
De novo transcriptomic analysis of an oleaginous microalga: Pathway description and gene discovery for production of next-generation biofuels
-
Retracted. PLoS ONE 7: 6
-
Wan, L., Han, J., Sang, M., Li, A., Wu, H., Yin, S., and Zhang, C. (2012). De novo transcriptomic analysis of an oleaginous microalga: pathway description and gene discovery for production of next-generation biofuels. PLoS ONE 7: e35142. Retracted. PLoS ONE 7: 6.
-
(2012)
Plos ONE
, vol.7
-
-
Wan, L.1
Han, J.2
Sang, M.3
Li, A.4
Wu, H.5
Yin, S.6
Zhang, C.7
-
69
-
-
33644762929
-
Ge-nomewide nonadditive gene regulation in Arabidopsis allotetraploids
-
Wang, J., Tian, L., Lee, H.S., Wei, N.E., Jiang, H., Watson, B., Madlung, A., Osborn, T.C., Doerge, R.W., Comai, L., and Chen, Z.J. (2006). Ge-nomewide nonadditive gene regulation in Arabidopsis allotetraploids. Genetics 172: 507–517.
-
(2006)
Genetics
, vol.172
, pp. 507-517
-
-
Wang, J.1
Tian, L.2
Lee, H.S.3
Wei, N.E.4
Jiang, H.5
Watson, B.6
Madlung, A.7
Osborn, T.C.8
Doerge, R.W.9
Comai, L.10
Chen, Z.J.11
|