-
1
-
-
80052372044
-
-
World Health Organization World Health Organization, Geneva
-
World Health Organization. Diarrhoeal Diseases (Updated February 2009) (World Health Organization, Geneva, 2009)
-
(2009)
Diarrhoeal Diseases (Updated February 2009)
-
-
-
2
-
-
0030297520
-
Colonization factors of human enterotoxigenic Escherichia coli (ETEC)
-
Gaastra, W. & Svennerholm, A.M. Colonization factors of human enterotoxigenic Escherichia coli (ETEC) Trends Microbiol. 4 444-452 (1996).
-
(1996)
Trends Microbiol.
, vol.4
, pp. 444-452
-
-
Gaastra, W.1
Svennerholm, A.M.2
-
3
-
-
22244478593
-
Enterotoxigenic escherichia coli in developing countries: Epidemiology, microbiology, clinical features, treatment, and prevention
-
Qadri, F., Svennerholm, A.M., Faruque, A.S. & Sack, R.B. Enterotoxigenic Escherichia coli in developing countries: epidemiology, microbiology, clinical features, treatment, and prevention. Clin. Microbiol. Rev. 18, 465-483 (2005)
-
(2005)
Clin. Microbiol. Rev.
, vol.18
, pp. 465-483
-
-
Qadri, F.1
Svennerholm, A.M.2
Faruque, A.S.3
Sack, R.B.4
-
4
-
-
80051571715
-
A systematic review of ETEC epidemiology focusing on colonization factor and toxin expression
-
Isidean, S.D., Riddle, M.S., Savarino, S.J. & Porter, C.K. A systematic review of ETEC epidemiology focusing on colonization factor and toxin expression. Vaccine 29, 6167-6178 (2011)
-
(2011)
Vaccine
, vol.29
, pp. 6167-6178
-
-
Isidean, S.D.1
Riddle, M.S.2
Savarino, S.J.3
Porter, C.K.4
-
5
-
-
84860560304
-
Recent progress toward an enterotoxigenic Escherichia coli vaccine
-
Svennerholm, A.M. & Lundgren, A. Recent progress toward an enterotoxigenic Escherichia coli vaccine. Expert. Rev. Vaccines 11, 495-507 (2012)
-
(2012)
Expert. Rev. Vaccines
, vol.11
, pp. 495-507
-
-
Svennerholm, A.M.1
Lundgren, A.2
-
6
-
-
0030696287
-
Occurrence distribution, and associations of O and H serogroups, colonization factor antigens, and toxins of enterotoxigenic Escherichia coli
-
Wolf, M.K. Occurrence, distribution, and associations of O and H serogroups, colonization factor antigens, and toxins of enterotoxigenic Escherichia coli. Clin. Microbiol. Rev. 10, 569-584 (1997)
-
(1997)
Clin. Microbiol. Rev.
, vol.10
, pp. 569-584
-
-
Wolf, M.K.1
-
7
-
-
0015594167
-
The exploitation of transmissible plasmids to study the pathogenesis of E. Coli diarrhoea
-
Smith, H.W. The exploitation of transmissible plasmids to study the pathogenesis of E. coli diarrhoea. Proc. R. Soc. Med. 66, 272-273 (1973)
-
(1973)
Proc. R. Soc. Med.
, vol.66
, pp. 272-273
-
-
Smith, H.W.1
-
8
-
-
33845578493
-
Phylogenetic comparisons reveal multiple acquisitions of the toxin genes by enterotoxigenic Escherichia coli strains of different evolutionary lineages
-
Turner, S.M. et al. Phylogenetic comparisons reveal multiple acquisitions of the toxin genes by enterotoxigenic Escherichia coli strains of different evolutionary lineages. J. Clin. Microbiol. 44, 4528-4536 (2006)
-
(2006)
J. Clin. Microbiol.
, vol.44
, pp. 4528-4536
-
-
Turner, S.M.1
-
9
-
-
77955434397
-
Ancestral lineages of human enterotoxigenic Escherichia coli
-
Steinsland, H., Lacher, D.W., Sommerfelt, H. & Whittam, T.S. Ancestral lineages of human enterotoxigenic Escherichia coli. J. Clin. Microbiol. 48, 2916-2924 (2010)
-
(2010)
J. Clin. Microbiol.
, vol.48
, pp. 2916-2924
-
-
Steinsland, H.1
Lacher, D.W.2
Sommerfelt, H.3
Whittam, T.S.4
-
10
-
-
2442667673
-
A specific genetic background is required for acquisition and expression of virulence factors in Escherichia coli
-
Escobar-P'ramo, P. et al. A specific genetic background is required for acquisition and expression of virulence factors in Escherichia coli. Mol. Biol. Evol. 21, 1085-1094 (2004)
-
(2004)
Mol. Biol. Evol.
, vol.21
, pp. 1085-1094
-
-
Escobar-Pramo, P.1
-
11
-
-
1342302811
-
Genotypic and phenotypic characterization of enterotoxigenic Escherichia coli (ETEC) strains isolated in Rio de Janeiro city, Brazil
-
Regua-Mangia, A.H. et al. Genotypic and phenotypic characterization of enterotoxigenic Escherichia coli (ETEC) strains isolated in Rio de Janeiro city, Brazil. FEMS Immunol. Med. Microbiol. 40, 155-162 (2004)
-
(2004)
FEMS Immunol. Med. Microbiol.
, vol.40
, pp. 155-162
-
-
Regua-Mangia, A.H.1
-
12
-
-
3142685235
-
Clonal relatedness of enterotoxigenic Escherichia coli strains isolated from a cohort of young children in Guinea-Bissau
-
Steinsland, H., Valentiner-Branth, P., Aaby, P., Mølbak, K. & Sommerfelt, H. Clonal relatedness of enterotoxigenic Escherichia coli strains isolated from a cohort of young children in Guinea-Bissau. J. Clin. Microbiol. 42, 3100-3107 (2004)
-
(2004)
J. Clin. Microbiol.
, vol.42
, pp. 3100-3107
-
-
Steinsland, H.1
Valentiner-Branth, P.2
Aaby, P.3
Mølbak, K.4
Sommerfelt, H.5
-
13
-
-
0036757710
-
Clonal clustering and colonization factors among thermolabile and porcine thermostable enterotoxin-producing Escherichia coli
-
Valvatne, H., Steinsland, H. & Sommerfelt, H. Clonal clustering and colonization factors among thermolabile and porcine thermostable enterotoxin-producing Escherichia coli. APMIS 110, 665-672 (2002)
-
(2002)
APMIS
, vol.110
, pp. 665-672
-
-
Valvatne, H.1
Steinsland, H.2
Sommerfelt, H.3
-
14
-
-
84857676422
-
Analysis of global transcriptional profiles of enterotoxigenic Escherichia coli isolate E24377A
-
Sahl, J.W. & Rasko, D.A. Analysis of global transcriptional profiles of enterotoxigenic Escherichia coli isolate E24377A. Infect. Immun. 80, 1232-1242 (2012)
-
(2012)
Infect. Immun.
, vol.80
, pp. 1232-1242
-
-
Sahl, J.W.1
Rasko, D.A.2
-
15
-
-
0025096192
-
Phylogenetic distribution of branched RNA-linked multicopy single-stranded DNA among natural isolates of Escherichia coli
-
Herzer, P.J., Inouye, S., Inouye, M. & Whittam, T.S. Phylogenetic distribution of branched RNA-linked multicopy single-stranded DNA among natural isolates of Escherichia coli. J. Bacteriol. 172, 6175-6181 (1990)
-
(1990)
J. Bacteriol.
, vol.172
, pp. 6175-6181
-
-
Herzer, P.J.1
Inouye, S.2
Inouye, M.3
Whittam, T.S.4
-
16
-
-
62349132559
-
Enhanced Bayesian modelling in BAPS software for learning genetic structures of populations
-
Corander, J., Marttinen, P., Sirén, J. & Tang, J. Enhanced Bayesian modelling in BAPS software for learning genetic structures of populations. BMC Bioinformatics 9, 539 (2008)
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 539
-
-
Corander, J.1
Marttinen, P.2
Sirén, J.3
Tang, J.4
-
17
-
-
58149293359
-
Functional and immunological characterization of a natural polymorphic variant of a heat-labile toxin (LT-I) produced by enterotoxigenic Escherichia coli (ETEC)
-
Lasaro, M.A., Mathias-Santos, C., Rodrigues, J.F. & Ferreira, L.C.S. Functional and immunological characterization of a natural polymorphic variant of a heat-labile toxin (LT-I) produced by enterotoxigenic Escherichia coli (ETEC)FEMS Immunol Med. Microbiol. 55 93-99 (2009).
-
(2009)
FEMS Immunol Med. Microbiol.
, vol.55
, pp. 93-99
-
-
Lasaro, M.A.1
Mathias-Santos, C.2
Rodrigues, J.F.3
Ferreira, L.C.S.4
-
18
-
-
0029901519
-
Clonal structure and virulence factors in strains of Escherichia coli of the classic serogroup O55
-
Rodrigues, J. et al. Clonal structure and virulence factors in strains of Escherichia coli of the classic serogroup O55. Infect. Immun. 64, 2680-2686 (1996)
-
(1996)
Infect. Immun.
, vol.64
, pp. 2680-2686
-
-
Rodrigues, J.1
-
19
-
-
24944575234
-
The pCoo plasmid of enterotoxigenic Escherichia coli is a mosaic cointegrate
-
Froehlich, B., Parkhill, J., Sanders, M., Quail, M.A. & Scott, J.R. The pCoo plasmid of enterotoxigenic Escherichia coli is a mosaic cointegrate. J. Bacteriol. 187, 6509-6516 (2005)
-
(2005)
J. Bacteriol.
, vol.187
, pp. 6509-6516
-
-
Froehlich, B.1
Parkhill, J.2
Sanders, M.3
Quail, M.A.4
Scott, J.R.5
-
20
-
-
71449086126
-
Pathogenomics of the virulence plasmids of Escherichia coli
-
Johnson, T.J. & Nolan, L.K. Pathogenomics of the virulence plasmids of Escherichia coli. Microbiol. Mol. Biol. Rev. 73, 750-774 (2009)
-
(2009)
Microbiol. Mol. Biol. Rev.
, vol.73
, pp. 750-774
-
-
Johnson, T.J.1
Nolan, L.K.2
-
21
-
-
78049387115
-
A commensal gone bad: Complete genome sequence of the prototypical enterotoxigenic Escherichia coli strain H10407
-
Crossman, L.C. et al. A commensal gone bad: complete genome sequence of the prototypical enterotoxigenic Escherichia coli strain H10407. J. Bacteriol. 192, 5822-5831 (2010)
-
(2010)
J. Bacteriol.
, vol.192
, pp. 5822-5831
-
-
Crossman, L.C.1
-
22
-
-
79251544864
-
Rapid pneumococcal evolution in response to clinical interventions
-
Croucher, N.J. et al. Rapid pneumococcal evolution in response to clinical interventions. Science 331, 430-434 (2011)
-
(2011)
Science
, vol.331
, pp. 430-434
-
-
Croucher, N.J.1
-
23
-
-
84871366407
-
Microevolutionary analysis of Clostridium difficile genomes to investigate transmission
-
Didelot, X. et al. Microevolutionary analysis of Clostridium difficile genomes to investigate transmission. Genome Biol. 13, R118 (2012)
-
(2012)
Genome Biol.
, vol.13
, pp. R118
-
-
Didelot, X.1
-
24
-
-
84858605067
-
Diarrhea incidence in low- and middle-income countries in 1990 and 2010: A systematic review
-
Fischer Walker, C.L., Perin, J., Aryee, M.J., Boschi-Pinto, C. & Black, R.E. Diarrhea incidence in low- and middle-income countries in 1990 and 2010: a systematic review. BMC Public Health 12, 220 (2012)
-
(2012)
BMC Public Health
, vol.12
, pp. 220
-
-
Fischer Walker, C.L.1
Perin, J.2
Aryee, M.J.3
Boschi-Pinto, C.4
Black, R.E.5
-
25
-
-
79251525497
-
A comparative genomic analysis of diverse clonal types of enterotoxigenic Escherichia coli reveals pathovar-specific conservation
-
Sahl, J.W. et al. A comparative genomic analysis of diverse clonal types of enterotoxigenic Escherichia coli reveals pathovar-specific conservation. Infect. Immun. 79, 950-960 (2011)
-
(2011)
Infect. Immun.
, vol.79
, pp. 950-960
-
-
Sahl, J.W.1
-
26
-
-
77954517260
-
Allelic variation in colonization factor CS6 of enterotoxigenic Escherichia coli isolated from patients with acute diarrhoea and controls
-
Sabui, S. et al. Allelic variation in colonization factor CS6 of enterotoxigenic Escherichia coli isolated from patients with acute diarrhoea and controls. J. Med. Microbiol. 59, 770-779 (2010)
-
(2010)
J. Med. Microbiol.
, vol.59
, pp. 770-779
-
-
Sabui, S.1
-
27
-
-
0031004145
-
Evolutionary relationships among pathogenic and nonpathogenic Escherichia coli strains inferred from multilocus enzyme electrophoresis and mdh sequence studies
-
Pupo, G.M., Karaolis, D.K., Lan, R. & Reeves, P.R. Evolutionary relationships among pathogenic and nonpathogenic Escherichia coli strains inferred from multilocus enzyme electrophoresis and mdh sequence studies. Infect. Immun. 65, 2685-2692 (1997)
-
(1997)
Infect. Immun.
, vol.65
, pp. 2685-2692
-
-
Pupo, G.M.1
Karaolis, D.K.2
Lan, R.3
Reeves, P.R.4
-
28
-
-
80053133499
-
Evidence for several waves of global transmission in the seventh cholera pandemic
-
Mutreja, A. et al. Evidence for several waves of global transmission in the seventh cholera pandemic. Nature 477, 462-465 (2011)
-
(2011)
Nature
, vol.477
, pp. 462-465
-
-
Mutreja, A.1
-
29
-
-
75649084906
-
Evolution of MRSA during hospital transmission and intercontinental spread
-
Harris, S.R. et al. Evolution of MRSA during hospital transmission and intercontinental spread. Science 327, 469-474 (2010)
-
(2010)
Science
, vol.327
, pp. 469-474
-
-
Harris, S.R.1
-
30
-
-
84865683817
-
Shigella sonnei genome sequencing and phylogenetic analysis indicate recent global dissemination from Europe
-
Holt, K.E. et al. Shigella sonnei genome sequencing and phylogenetic analysis indicate recent global dissemination from Europe. Nat. Genet. 44, 1056-1059 (2012)
-
(2012)
Nat. Genet.
, vol.44
, pp. 1056-1059
-
-
Holt, K.E.1
-
31
-
-
84868201561
-
Intracontinental spread of human invasive Salmonella Typhimurium pathovariants in sub-Saharan Africa
-
Okoro, C.K. et al. Intracontinental spread of human invasive Salmonella Typhimurium pathovariants in sub-Saharan Africa. Nat. Genet. 44, 1215-1221 (2012)
-
(2012)
Nat. Genet.
, vol.44
, pp. 1215-1221
-
-
Okoro, C.K.1
-
32
-
-
84870419742
-
The oral, live attenuated enterotoxigenic Escherichia coli vaccine ACE527 reduces the incidence and severity of diarrhea in a human challenge model of diarrheal disease
-
Darsley, M.J. et al. The oral, live attenuated enterotoxigenic Escherichia coli vaccine ACE527 reduces the incidence and severity of diarrhea in a human challenge model of diarrheal disease. Clin. Vaccine Immunol. 19, 1921-1931 (2012)
-
(2012)
Clin. Vaccine Immunol.
, vol.19
, pp. 1921-1931
-
-
Darsley, M.J.1
-
33
-
-
35348895100
-
Comparative analyses of phenotypic and genotypic methods for detection of enterotoxigenic Escherichia coli toxins and colonization factors
-
Sjöling, A., Wiklund, G., Savarino, S.J., Cohen, D.I. & Svennerholm, A.M. Comparative analyses of phenotypic and genotypic methods for detection of enterotoxigenic Escherichia coli toxins and colonization factors. J. Clin. Microbiol. 45, 3295-3301 (2007)
-
(2007)
J. Clin. Microbiol.
, vol.45
, pp. 3295-3301
-
-
Sjöling, A.1
Wiklund, G.2
Savarino, S.J.3
Cohen, D.I.4
Svennerholm, A.M.5
-
34
-
-
65249135466
-
Development of multiplex PCR assays for detection of enterotoxigenic Escherichia coli colonization factors and toxins
-
Rodas, C. et al. Development of multiplex PCR assays for detection of enterotoxigenic Escherichia coli colonization factors and toxins. J. Clin. Microbiol. 47, 1218-1220 (2009)
-
(2009)
J. Clin. Microbiol.
, vol.47
, pp. 1218-1220
-
-
Rodas, C.1
-
35
-
-
67651089508
-
Improved protocols for the Illumina Genome Analyzer sequencing system
-
Unit 18
-
Quail, M.A., Swerdlow, H. & Turner, D.J. Improved protocols for the Illumina Genome Analyzer sequencing system. Curr. Protoc. Hum. Genet. Unit 18.2 1-27 (2009)
-
(2009)
Curr. Protoc. Hum. Genet
, vol.2
, pp. 1-27
-
-
Quail, M.A.1
Swerdlow, H.2
Turner, D.J.3
-
36
-
-
33745634395
-
Cd-hit: A fast program for clustering and comparing large sets of protein or nucleotide sequences
-
Li, W. & Godzik, A. Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics 22, 1658-1659 (2006)
-
(2006)
Bioinformatics
, vol.22
, pp. 1658-1659
-
-
Li, W.1
Godzik, A.2
-
37
-
-
84855261123
-
Detection of recombination events in bacterial genomes from large population samples
-
Marttinen, P. et al. Detection of recombination events in bacterial genomes from large population samples. Nucleic Acids Res. 40, e6 (2012)
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. e6
-
-
Marttinen, P.1
-
38
-
-
84876585874
-
The evolutionary path to extraintestinal pathogenic, drug-resistant Escherichia coli is marked by drastic reduction in detectable recombination within the core genome
-
McNally, A., Cheng, L., Harris, S.R. & Corander, J. The evolutionary path to extraintestinal pathogenic, drug-resistant Escherichia coli is marked by drastic reduction in detectable recombination within the core genome. Genome Biol. Evol. 5, 699-710 (2013)
-
(2013)
Genome Biol. Evol.
, vol.5
, pp. 699-710
-
-
McNally, A.1
Cheng, L.2
Harris, S.R.3
Corander, J.4
-
39
-
-
84901416262
-
Phylogeographic variation in recombination rates within a global clone of methicillin-resistant Staphylococcus aureus
-
Castillo-Ram'rez, S. et al. Phylogeographic variation in recombination rates within a global clone of methicillin-resistant Staphylococcus aureus. Genome Biol. 13, R126 (2012)
-
(2012)
Genome Biol.
, vol.13
, pp. R126
-
-
Castillo-Ramrez, S.1
-
40
-
-
70049114381
-
Identifying currents in the gene pool for bacterial populations using an integrative approach
-
Tang, J., Hanage, W.P., Fraser, C. & Corander, J. Identifying currents in the gene pool for bacterial populations using an integrative approach. PLOS Comput. Biol. 5, e1000455 (2009)
-
(2009)
PLOS Comput. Biol.
, vol.5
, pp. e1000455
-
-
Tang, J.1
Hanage, W.P.2
Fraser, C.3
Corander, J.4
-
41
-
-
84876526192
-
Hierarchical and spatially explicit clustering of DNA sequences with BAPS software
-
Cheng, L., Connor, T.R., Sirén, J., Aanensen, D.M. & Corander, J. Hierarchical and spatially explicit clustering of DNA sequences with BAPS software. Mol. Biol. Evol. 30, 1224-1228 (2013)
-
(2013)
Mol. Biol. Evol.
, vol.30
, pp. 1224-1228
-
-
Cheng, L.1
Connor, T.R.2
Sirén, J.3
Aanensen, D.M.4
Corander, J.5
-
42
-
-
84863596741
-
Population structure in the Neisseria, and the biological significance of fuzzy species
-
Corander, J., Connor, T.R., O'Dwyer, C.A., Kroll, J.S. & Hanage, W.P. Population structure in the Neisseria, and the biological significance of fuzzy species. J. R. Soc. Interface 9, 1208-1215 (2012)
-
(2012)
J. R. Soc. Interface
, vol.9
, pp. 1208-1215
-
-
Corander, J.1
Connor, T.R.2
Odwyer, C.A.3
Kroll, J.S.4
Hanage, W.P.5
-
43
-
-
84865798417
-
Restricted gene flow among hospital subpopulations of Enterococcus faecium
-
Willems, R.J.L. et al. Restricted gene flow among hospital subpopulations of Enterococcus faecium. MBio 3, e00151-12 (2012)
-
(2012)
MBio
, vol.3
, pp. e00151-e00212
-
-
Willems, R.J.L.1
-
44
-
-
67149119196
-
Hyper-recombination, diversity, and antibiotic resistance in pneumococcus
-
Hanage, W.P., Fraser, C., Tang, J., Connor, T.R. & Corander, J. Hyper-recombination, diversity, and antibiotic resistance in pneumococcus. Science 324, 1454-1457 (2009)
-
(2009)
Science
, vol.324
, pp. 1454-1457
-
-
Hanage, W.P.1
Fraser, C.2
Tang, J.3
Connor, T.R.4
Corander, J.5
-
45
-
-
84878735463
-
Population genomics of post-vaccine changes in pneumococcal epidemiology
-
Croucher, N.J. et al. Population genomics of post-vaccine changes in pneumococcal epidemiology. Nat. Genet. 45, 656-663 (2013)
-
(2013)
Nat. Genet.
, vol.45
, pp. 656-663
-
-
Croucher, N.J.1
-
46
-
-
38649110663
-
BEAST: Bayesian evolutionary analysis by sampling trees
-
Drummond, A.J. & Rambaut, A. BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol. Biol. 7, 214 (2007)
-
(2007)
BMC Evol. Biol.
, vol.7
, pp. 214
-
-
Drummond, A.J.1
Rambaut, A.2
-
47
-
-
17744381574
-
Bayesian coalescent inference of past population dynamics from molecular sequences
-
Drummond, A.J., Rambaut, A., Shapiro, B. & Pybus, O.G. Bayesian coalescent inference of past population dynamics from molecular sequences. Mol. Biol. Evol. 22, 1185-1192 (2005)
-
(2005)
Mol. Biol. Evol.
, vol.22
, pp. 1185-1192
-
-
Drummond, A.J.1
Rambaut, A.2
Shapiro, B.3
Pybus, O.G.4
-
48
-
-
33344465800
-
Relaxed phylogenetics and dating with confidence
-
Drummond, A.J., Ho, S.Y., Phillips, M.J. & Rambaut, A. Relaxed phylogenetics and dating with confidence. PLoS Biol. 4, e88 (2006)
-
(2006)
PLoS Biol.
, vol.4
, pp. e88
-
-
Drummond, A.J.1
Ho, S.Y.2
Phillips, M.J.3
Rambaut, A.4
-
49
-
-
27744453560
-
Identification of plasmids by PCR-based replicon typing
-
Carattoli, A. et al. Identification of plasmids by PCR-based replicon typing. J. Microbiol. Methods 63, 219-228 (2005)
-
(2005)
J. Microbiol. Methods
, vol.63
, pp. 219-228
-
-
Carattoli, A.1
|