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Volumn 6, Issue 2, 2015, Pages 218-231

Big answers from small worlds: A user's guide for protist microcosms as a model system in ecology and evolution

Author keywords

Ciliates; Comparability; Ecological theory; Experimental ecology; Methods; Protists; Protocols; Protozoa; Standardization

Indexed keywords

CILIOPHORA; PROTISTA; PROTOZOA;

EID: 84922403637     PISSN: None     EISSN: 2041210X     Source Type: Journal    
DOI: 10.1111/2041-210X.12312     Document Type: Review
Times cited : (144)

References (123)
  • 1
    • 0001500389 scopus 로고
    • Predation and prey community structure: an experimental study of the effect of mosquito larvae on the protozoan communities of pitcher plants
    • Addicott, J.F. (1974) Predation and prey community structure: an experimental study of the effect of mosquito larvae on the protozoan communities of pitcher plants. Ecology, 55, 475-492.
    • (1974) Ecology , vol.55 , pp. 475-492
    • Addicott, J.F.1
  • 3
    • 84861410210 scopus 로고    scopus 로고
    • Spatial clustering of habitat structure effects patterns of community composition and diversity
    • Altermatt, F. & Holyoak, M. (2012) Spatial clustering of habitat structure effects patterns of community composition and diversity. Ecology, 93, 1125-1133.
    • (2012) Ecology , vol.93 , pp. 1125-1133
    • Altermatt, F.1    Holyoak, M.2
  • 4
    • 79955645269 scopus 로고    scopus 로고
    • Interactive effects of disturbance and dispersal directionality on species richness and composition in metacommunities
    • Altermatt, F., Schreiber, S. & Holyoak, M. (2011b) Interactive effects of disturbance and dispersal directionality on species richness and composition in metacommunities. Ecology, 92, 859-870.
    • (2011) Ecology , vol.92 , pp. 859-870
    • Altermatt, F.1    Schreiber, S.2    Holyoak, M.3
  • 5
    • 79955749635 scopus 로고    scopus 로고
    • Effects of connectivity and recurrent local disturbances on community structure and population density in experimental metacommunities
    • Altermatt, F., Bieger, A., Carrara, F., Rinaldo, A. & Holyoak, M. (2011a) Effects of connectivity and recurrent local disturbances on community structure and population density in experimental metacommunities. PLoS ONE, 6, e19525.
    • (2011) PLoS ONE , vol.6 , pp. e19525
    • Altermatt, F.1    Bieger, A.2    Carrara, F.3    Rinaldo, A.4    Holyoak, M.5
  • 7
    • 79958716487 scopus 로고    scopus 로고
    • Adaptation and evolutionary rescue in metapopulations experiencing environmental deterioration
    • Bell, G. & Gonzalez, A. (2011) Adaptation and evolutionary rescue in metapopulations experiencing environmental deterioration. Science, 332, 1327-1330.
    • (2011) Science , vol.332 , pp. 1327-1330
    • Bell, G.1    Gonzalez, A.2
  • 9
    • 77958599116 scopus 로고    scopus 로고
    • Direct and indirect effects of temperature on the population dynamics and ecosystem functioning of aquatic microbial ecosystems
    • Beveridge, O.S., Petchey, O.L. & Humphries, S. (2010a) Direct and indirect effects of temperature on the population dynamics and ecosystem functioning of aquatic microbial ecosystems. Journal of Animal Ecology, 79, 1324-1331.
    • (2010) Journal of Animal Ecology , vol.79 , pp. 1324-1331
    • Beveridge, O.S.1    Petchey, O.L.2    Humphries, S.3
  • 10
    • 78650072330 scopus 로고    scopus 로고
    • Mechanisms of temperature-dependent swimming: the importance of physics, physiology and body size in determining protist swimming speed
    • Beveridge, O.S., Petchey, O.L. & Humphries, S. (2010b) Mechanisms of temperature-dependent swimming: the importance of physics, physiology and body size in determining protist swimming speed. Journal of Experimental Biology, 213, 4223-4231.
    • (2010) Journal of Experimental Biology , vol.213 , pp. 4223-4231
    • Beveridge, O.S.1    Petchey, O.L.2    Humphries, S.3
  • 12
    • 33750444559 scopus 로고    scopus 로고
    • Evidence for biochemical limitation of population growth and reproduction of the rotifer Keratella quadrata fed with freshwater protists
    • Boëchat, I.G. & Adrian, R. (2006) Evidence for biochemical limitation of population growth and reproduction of the rotifer Keratella quadrata fed with freshwater protists. Journal of Plankton Research, 28, 1027-1038.
    • (2006) Journal of Plankton Research , vol.28 , pp. 1027-1038
    • Boëchat, I.G.1    Adrian, R.2
  • 13
    • 84867460439 scopus 로고    scopus 로고
    • Cytosine methylation and hydroxymethylation mark DNA for elimination in Oxytricha trifallax
    • Bracht, J.R., Perlman, D.H. & Landweber, L.F. (2012) Cytosine methylation and hydroxymethylation mark DNA for elimination in Oxytricha trifallax. Genome Biology, 13, R99.
    • (2012) Genome Biology , vol.13 , pp. R99
    • Bracht, J.R.1    Perlman, D.H.2    Landweber, L.F.3
  • 15
    • 0037443875 scopus 로고    scopus 로고
    • Complete sequence of the mitochondrial genome of Tetrahymena thermophila and comparative methods for identifying highly divergent genes
    • Brunk, C.F., Lee, L.C., Tran, A.B. & Li, J. (2003) Complete sequence of the mitochondrial genome of Tetrahymena thermophila and comparative methods for identifying highly divergent genes. Nucleic Acids Research, 31, 1673-1682.
    • (2003) Nucleic Acids Research , vol.31 , pp. 1673-1682
    • Brunk, C.F.1    Lee, L.C.2    Tran, A.B.3    Li, J.4
  • 16
    • 0034700482 scopus 로고    scopus 로고
    • Disturbance and diversity in experimental microcosms
    • Buckling, A., Kassen, R., Bell, G. & Rainey, P.B. (2000) Disturbance and diversity in experimental microcosms. Nature, 408, 961-964.
    • (2000) Nature , vol.408 , pp. 961-964
    • Buckling, A.1    Kassen, R.2    Bell, G.3    Rainey, P.B.4
  • 17
    • 33646130848 scopus 로고    scopus 로고
    • Metacommunity influences on community richness at multiple spatial scales: a microcosm experiment
    • Cadotte, M. (2006) Metacommunity influences on community richness at multiple spatial scales: a microcosm experiment. Ecology, 87, 1008-1016.
    • (2006) Ecology , vol.87 , pp. 1008-1016
    • Cadotte, M.1
  • 18
    • 34247380363 scopus 로고    scopus 로고
    • Competition-colonization trade-offs and disturbance effects at multiple scales
    • Cadotte, M.W. (2007) Competition-colonization trade-offs and disturbance effects at multiple scales. Ecology, 88, 823-829.
    • (2007) Ecology , vol.88 , pp. 823-829
    • Cadotte, M.W.1
  • 19
    • 18444411904 scopus 로고    scopus 로고
    • Constructing nature: laboratory models as necessary tools for investigating complex ecological communities
    • Cadotte, M.W., Drake, J.A. & Fukami, T. (2005) Constructing nature: laboratory models as necessary tools for investigating complex ecological communities. Advances in Ecological Research, 37, 333-353.
    • (2005) Advances in Ecological Research , vol.37 , pp. 333-353
    • Cadotte, M.W.1    Drake, J.A.2    Fukami, T.3
  • 20
    • 0038315527 scopus 로고    scopus 로고
    • A rapid microtiter plate method to measure carbon dioxide evolved from carbon substrate amendments so as to determine the physiological profiles of soil microbial communities by using whole soil
    • Campbell, C.D. & Chapman, S.J. (2003) A rapid microtiter plate method to measure carbon dioxide evolved from carbon substrate amendments so as to determine the physiological profiles of soil microbial communities by using whole soil. Applied and Environmental Microbiology, 69, 3593-3599.
    • (2003) Applied and Environmental Microbiology , vol.69 , pp. 3593-3599
    • Campbell, C.D.1    Chapman, S.J.2
  • 23
    • 84929103597 scopus 로고    scopus 로고
    • Experimental evidence for strong stabilizing forces at high functional diversity in aquatic microbial communities
    • Carrara, F., Giometto, A., Seymour, M., Rinaldo, A. & Altermatt, F. (2014) Experimental evidence for strong stabilizing forces at high functional diversity in aquatic microbial communities. Ecology, doi: 10.1890/14-1324.1.
    • (2014) Ecology
    • Carrara, F.1    Giometto, A.2    Seymour, M.3    Rinaldo, A.4    Altermatt, F.5
  • 24
    • 84858712942 scopus 로고    scopus 로고
    • Tetrahymena in the laboratory: strain resources, methods for culture, maintenance, and storage
    • ed. K. Collins). Academic Press, Amsterdam.
    • Cassidy-Hanley, D.M. (2012) Tetrahymena in the laboratory: strain resources, methods for culture, maintenance, and storage. Methods in Cell Biology: Tetrahymena Thermophila (ed. K. Collins ), pp. 239-276. Academic Press, Amsterdam.
    • (2012) Methods in Cell Biology: Tetrahymena Thermophila , pp. 239-276
    • Cassidy-Hanley, D.M.1
  • 26
    • 84892681115 scopus 로고    scopus 로고
    • Effects of directional environmental change on extinction dynamics in experimental microbial communities are predicted by a simple model
    • Clements, C.F., Collen, B., Blackburn, T.M. & Petchey, O.L. (2014) Effects of directional environmental change on extinction dynamics in experimental microbial communities are predicted by a simple model. Oikos, 123, 141-150.
    • (2014) Oikos , vol.123 , pp. 141-150
    • Clements, C.F.1    Collen, B.2    Blackburn, T.M.3    Petchey, O.L.4
  • 30
    • 84855609597 scopus 로고    scopus 로고
    • Coexistence via resource partitioning fails to generate an increase in community function
    • DeLong, J.P. & Vasseur, D.A. (2012) Coexistence via resource partitioning fails to generate an increase in community function. PLoS ONE, 7, 406-411.
    • (2012) PLoS ONE , vol.7 , pp. 406-411
    • DeLong, J.P.1    Vasseur, D.A.2
  • 31
    • 84864129149 scopus 로고    scopus 로고
    • Mechanistic analogy: how microcosms explain nature
    • Drake, J. & Kramer, A. (2012) Mechanistic analogy: how microcosms explain nature. Theoretical Ecology, 5, 433-444.
    • (2012) Theoretical Ecology , vol.5 , pp. 433-444
    • Drake, J.1    Kramer, A.2
  • 32
    • 68349137541 scopus 로고    scopus 로고
    • Developmental genome rearrangements in ciliates: a natural genomic subtraction mediated by non-coding transcripts
    • Duharcourt, S., Lepere, G. & Meyer, E. (2009) Developmental genome rearrangements in ciliates: a natural genomic subtraction mediated by non-coding transcripts. Trends in Genetics, 25, 344-350.
    • (2009) Trends in Genetics , vol.25 , pp. 344-350
    • Duharcourt, S.1    Lepere, G.2    Meyer, E.3
  • 33
    • 84868694105 scopus 로고    scopus 로고
    • Quorum sensing and density-dependent dispersal in an aquatic model system
    • Fellous, S., Duncan, A., Coulon, A.L. & Kaltz, O. (2012a) Quorum sensing and density-dependent dispersal in an aquatic model system. PLoS ONE, 7, e48436.
    • (2012) PLoS ONE , vol.7 , pp. e48436
    • Fellous, S.1    Duncan, A.2    Coulon, A.L.3    Kaltz, O.4
  • 34
    • 84931749062 scopus 로고    scopus 로고
    • Genetic influence on disease spread following arrival of infected carriers
    • Fellous, S., Duncan, A.B., Quillery, E., Vale, P.F. & Kaltz, O. (2012b) Genetic influence on disease spread following arrival of infected carriers. Ecology Letters, 15, 186-192.
    • (2012) Ecology Letters , vol.15 , pp. 186-192
    • Fellous, S.1    Duncan, A.B.2    Quillery, E.3    Vale, P.F.4    Kaltz, O.5
  • 35
    • 0001525422 scopus 로고
    • Intrinsic rate of natural increase: the relationship with body size
    • Fenchel, T. (1974) Intrinsic rate of natural increase: the relationship with body size. Oecologia, 14, 317-326.
    • (1974) Oecologia , vol.14 , pp. 317-326
    • Fenchel, T.1
  • 36
    • 0035544330 scopus 로고    scopus 로고
    • How dinoflagellates swim
    • Fenchel, T. (2001) How dinoflagellates swim. Protist, 152, 329-338.
    • (2001) Protist , vol.152 , pp. 329-338
    • Fenchel, T.1
  • 37
    • 0002116249 scopus 로고
    • Respiration rates in heterotrophic, free-living protozoa
    • Fenchel, T. & Finlay, B.J. (1983) Respiration rates in heterotrophic, free-living protozoa. Microbial Ecology, 9, 99-122.
    • (1983) Microbial Ecology , vol.9 , pp. 99-122
    • Fenchel, T.1    Finlay, B.J.2
  • 38
    • 4043087606 scopus 로고    scopus 로고
    • The ubiquity of small species: patterns of local and global diversity
    • Fenchel, T. & Finlay, B.J. (2004) The ubiquity of small species: patterns of local and global diversity. BioScience, 54, 777-784.
    • (2004) BioScience , vol.54 , pp. 777-784
    • Fenchel, T.1    Finlay, B.J.2
  • 39
    • 0029752827 scopus 로고    scopus 로고
    • A user-friendly guide to the ciliates (Protozoa, Ciliophora) commonly used by hydrobiologists as bioindicators in rivers, lakes and water waters, with notes on their ecology
    • Foissner, W. & Berger, H. (1996) A user-friendly guide to the ciliates (Protozoa, Ciliophora) commonly used by hydrobiologists as bioindicators in rivers, lakes and water waters, with notes on their ecology. Freshwater Biology, 35, 375-482.
    • (1996) Freshwater Biology , vol.35 , pp. 375-482
    • Foissner, W.1    Berger, H.2
  • 40
    • 0035086893 scopus 로고    scopus 로고
    • Effects of intra- and interspecific interactions on species responses to environmental change
    • Fox, J.W. & Morin, P.J. (2001) Effects of intra- and interspecific interactions on species responses to environmental change. Journal of Animal Ecology, 70, 80-90.
    • (2001) Journal of Animal Ecology , vol.70 , pp. 80-90
    • Fox, J.W.1    Morin, P.J.2
  • 41
    • 0030617596 scopus 로고    scopus 로고
    • Variable outcomes of protist-rotifer competition in laboratory microcosms
    • Fox, J.W. & Smith, D.C. (1997) Variable outcomes of protist-rotifer competition in laboratory microcosms. Oikos, 79, 489-495.
    • (1997) Oikos , vol.79 , pp. 489-495
    • Fox, J.W.1    Smith, D.C.2
  • 42
    • 84928138574 scopus 로고    scopus 로고
    • Density-dependent movement and the consequences of the Allee effect in the model organism Tetrahymena
    • Fronhofer, E.A., Kropf, T. & Altermatt, F. (2014) Density-dependent movement and the consequences of the Allee effect in the model organism Tetrahymena. Journal of Animal Ecology, doi: 10.1111/1365-2656.12315.
    • (2014) Journal of Animal Ecology
    • Fronhofer, E.A.1    Kropf, T.2    Altermatt, F.3
  • 43
    • 0041764898 scopus 로고    scopus 로고
    • Productivity-biodiversity relationships depend on the history of community assembly
    • Fukami, T. & Morin, P.J. (2003) Productivity-biodiversity relationships depend on the history of community assembly. Nature, 424, 423-426.
    • (2003) Nature , vol.424 , pp. 423-426
    • Fukami, T.1    Morin, P.J.2
  • 46
    • 0942274312 scopus 로고
    • The dynamics of a natural population of Paramecium and the rôle of interspecific competition in community structure
    • Gill, D.E. & Nelson, G.H. (1972) The dynamics of a natural population of Paramecium and the rôle of interspecific competition in community structure. Journal of Animal Ecology, 41, 137-151.
    • (1972) Journal of Animal Ecology , vol.41 , pp. 137-151
    • Gill, D.E.1    Nelson, G.H.2
  • 49
    • 0034870192 scopus 로고    scopus 로고
    • Quantifying biodiversity: procedures and pitfalls in the measurement and comparison of species richness
    • Gotelli, N.J. & Colwell, R.K. (2001) Quantifying biodiversity: procedures and pitfalls in the measurement and comparison of species richness. Ecology Letters, 4, 379-391.
    • (2001) Ecology Letters , vol.4 , pp. 379-391
    • Gotelli, N.J.1    Colwell, R.K.2
  • 50
    • 69949099870 scopus 로고    scopus 로고
    • Growth phase and elemental stoichiometry of bacterial prey influences ciliate grazing selectivity
    • Gruber, D.F., Tuorto, S. & Taghon, G.L. (2009) Growth phase and elemental stoichiometry of bacterial prey influences ciliate grazing selectivity. Journal of Eukaryotic Microbiology, 56, 466-471.
    • (2009) Journal of Eukaryotic Microbiology , vol.56 , pp. 466-471
    • Gruber, D.F.1    Tuorto, S.2    Taghon, G.L.3
  • 53
    • 79954587407 scopus 로고    scopus 로고
    • Environmental barcoding: a next-generation sequencing approach for biomonitoring applications using river benthos
    • Hajibabaei, M., Shokralla, S., Zhou, X., Singer, G.A.C. & Baird, D.J. (2011) Environmental barcoding: a next-generation sequencing approach for biomonitoring applications using river benthos. PLoS ONE, 6, e17497.
    • (2011) PLoS ONE , vol.6 , pp. e17497
    • Hajibabaei, M.1    Shokralla, S.2    Zhou, X.3    Singer, G.A.C.4    Baird, D.J.5
  • 54
    • 77953479063 scopus 로고    scopus 로고
    • Cytometric methods for measuring bacteria in water: advantages, pitfalls and applications
    • Hammes, F. & Egli, T. (2010) Cytometric methods for measuring bacteria in water: advantages, pitfalls and applications. Analytical and Bioanalytical Chemistry, 397, 1083-1095.
    • (2010) Analytical and Bioanalytical Chemistry , vol.397 , pp. 1083-1095
    • Hammes, F.1    Egli, T.2
  • 55
    • 84903719238 scopus 로고    scopus 로고
    • A newly discovered role of evolution in previously published consumer-resource dynamics
    • Hiltunen, T., Hairston, N.G., Hooker, G., Jones, L.E. & Ellner, S.P. (2014) A newly discovered role of evolution in previously published consumer-resource dynamics. Ecology Letters, 17, 915-923.
    • (2014) Ecology Letters , vol.17 , pp. 915-923
    • Hiltunen, T.1    Hairston, N.G.2    Hooker, G.3    Jones, L.E.4    Ellner, S.P.5
  • 56
    • 0030433324 scopus 로고    scopus 로고
    • Persistence of an extinction-prone predator-prey interaction through metapopulation dynamics
    • Holyoak, M. & Lawler, S.P. (1996a) Persistence of an extinction-prone predator-prey interaction through metapopulation dynamics. Ecology, 77, 1867-1879.
    • (1996) Ecology , vol.77 , pp. 1867-1879
    • Holyoak, M.1    Lawler, S.P.2
  • 57
    • 0030304868 scopus 로고    scopus 로고
    • The role of dispersal in predator-prey metapopulation dynamics
    • Holyoak, M. & Lawler, S.P. (1996b) The role of dispersal in predator-prey metapopulation dynamics. Journal of Animal Ecology, 65, 640-652.
    • (1996) Journal of Animal Ecology , vol.65 , pp. 640-652
    • Holyoak, M.1    Lawler, S.P.2
  • 58
    • 33646884402 scopus 로고    scopus 로고
    • The contribution of laboratory experiments on protists to understanding population and metapopulation dynamics
    • Holyoak, M. & Lawler, S.P. (2005) The contribution of laboratory experiments on protists to understanding population and metapopulation dynamics. Advances in Ecological Research, 37, 245-271.
    • (2005) Advances in Ecological Research , vol.37 , pp. 245-271
    • Holyoak, M.1    Lawler, S.P.2
  • 59
    • 34249950990 scopus 로고    scopus 로고
    • Raman-FISH: combining stable-isotope Raman spectroscopy and fluorescence in situ hybridization for the single cell analysis of identity and function
    • Huang, W.E., Stoecker, K., Griffiths, R., Newbold, L., Daims, H., Whiteley, A.S. & Wagner, M. (2007) Raman-FISH: combining stable-isotope Raman spectroscopy and fluorescence in situ hybridization for the single cell analysis of identity and function. Environmental Microbiology, 9, 1878-1889.
    • (2007) Environmental Microbiology , vol.9 , pp. 1878-1889
    • Huang, W.E.1    Stoecker, K.2    Griffiths, R.3    Newbold, L.4    Daims, H.5    Whiteley, A.S.6    Wagner, M.7
  • 62
    • 15944395783 scopus 로고    scopus 로고
    • Predator diet breadth influences the relative importance of bottom-up and top-down control of prey biomass and diversity
    • Jiang, L. & Morin, P.J. (2005) Predator diet breadth influences the relative importance of bottom-up and top-down control of prey biomass and diversity. American Naturalist, 165, 350-363.
    • (2005) American Naturalist , vol.165 , pp. 350-363
    • Jiang, L.1    Morin, P.J.2
  • 63
    • 54549115948 scopus 로고    scopus 로고
    • Community assembly in the presence of disturbance: a microcosm experiment
    • Jiang, L. & Patel, S.N. (2008) Community assembly in the presence of disturbance: a microcosm experiment. Ecology, 89, 1931-1940.
    • (2008) Ecology , vol.89 , pp. 1931-1940
    • Jiang, L.1    Patel, S.N.2
  • 64
    • 0025752928 scopus 로고
    • Toxicity and distribution of copper in an aquatic microcosm under different alkalinity and hardness
    • Jin, H.J., Zhang, Y.M. & Yang, R. (1991) Toxicity and distribution of copper in an aquatic microcosm under different alkalinity and hardness. Chemosphere, 22, 577-596.
    • (1991) Chemosphere , vol.22 , pp. 577-596
    • Jin, H.J.1    Zhang, Y.M.2    Yang, R.3
  • 66
    • 0041475754 scopus 로고    scopus 로고
    • Dispersal rates affect species composition in metacommunities of Sarracenia purpurea inquilines
    • Kneitel, J.M. & Miller, T.E. (2003) Dispersal rates affect species composition in metacommunities of Sarracenia purpurea inquilines. American Naturalist, 162, 165-171.
    • (2003) American Naturalist , vol.162 , pp. 165-171
    • Kneitel, J.M.1    Miller, T.E.2
  • 67
    • 79952031353 scopus 로고    scopus 로고
    • Stronger inducible defences enhance persistence of intraguild prey
    • Kratina, P., Hammill, E. & Anholt, B.R. (2010) Stronger inducible defences enhance persistence of intraguild prey. Journal of Animal Ecology, 79, 993-999.
    • (2010) Journal of Animal Ecology , vol.79 , pp. 993-999
    • Kratina, P.1    Hammill, E.2    Anholt, B.R.3
  • 68
    • 60449111930 scopus 로고    scopus 로고
    • Functional responses modified by predator density
    • Kratina, P., Vos, M., Bateman, A. & Anholt, B.R. (2009) Functional responses modified by predator density. Oecologia, 159, 425-433.
    • (2009) Oecologia , vol.159 , pp. 425-433
    • Kratina, P.1    Vos, M.2    Bateman, A.3    Anholt, B.R.4
  • 69
    • 0042232125 scopus 로고    scopus 로고
    • Environmental noise and population dynamics of the ciliated protozoa Tetrahymena thermophila in aquatic microcosms
    • Laakso, J., Loytynoja, K. & Kaitala, V. (2003) Environmental noise and population dynamics of the ciliated protozoa Tetrahymena thermophila in aquatic microcosms. Oikos, 102, 663-671.
    • (2003) Oikos , vol.102 , pp. 663-671
    • Laakso, J.1    Loytynoja, K.2    Kaitala, V.3
  • 70
    • 0002100031 scopus 로고    scopus 로고
    • Ecology in a bottle: using microcosms to test theory
    • eds W.J.J. Resetarits & J. Bernardo). Oxford University Press, New York.
    • Lawler, S.P. (1998) Ecology in a bottle: using microcosms to test theory. Experimental Ecology: Issues and Perspectives (eds W.J.J. Resetarits & J. Bernardo ), pp. 236-253. Oxford University Press, New York.
    • (1998) Experimental Ecology: Issues and Perspectives , pp. 236-253
    • Lawler, S.P.1
  • 71
    • 0027528060 scopus 로고
    • Food web architecture and population dynamics in laboratory microcosms of protists
    • Lawler, S.P. & Morin, P.J. (1993) Food web architecture and population dynamics in laboratory microcosms of protists. American Naturalist, 141, 675-686.
    • (1993) American Naturalist , vol.141 , pp. 675-686
    • Lawler, S.P.1    Morin, P.J.2
  • 74
    • 84864462845 scopus 로고    scopus 로고
    • The Metatron: an experimental system to study dispersal and metaecosystems for terrestrial organisms
    • Legrand, D., Guillaume, O., Baguette, M., Cote, J., Trochet, A., Calvez, O. et al. (2012) The Metatron: an experimental system to study dispersal and metaecosystems for terrestrial organisms. Nature Methods, 9, 828-833.
    • (2012) Nature Methods , vol.9 , pp. 828-833
    • Legrand, D.1    Guillaume, O.2    Baguette, M.3    Cote, J.4    Trochet, A.5    Calvez, O.6
  • 76
    • 77953855044 scopus 로고    scopus 로고
    • High community dissimilarity at low productivity causes the productivity-richness relation to vary with observational scale
    • Li, W. & Stevens, M.H.H. (2010) High community dissimilarity at low productivity causes the productivity-richness relation to vary with observational scale. Community Ecology, 11, 27-34.
    • (2010) Community Ecology , vol.11 , pp. 27-34
    • Li, W.1    Stevens, M.H.H.2
  • 77
    • 84873389788 scopus 로고    scopus 로고
    • Stable isotope probing and Raman spectroscopy for monitoring carbon flow in a food chain and revealing metabolic pathway
    • Li, M., Huang, W.E., Gibson, C.M., Fowler, P.W. & Jousset, A. (2013) Stable isotope probing and Raman spectroscopy for monitoring carbon flow in a food chain and revealing metabolic pathway. Analytical Chemistry, 85, 1642-1649.
    • (2013) Analytical Chemistry , vol.85 , pp. 1642-1649
    • Li, M.1    Huang, W.E.2    Gibson, C.M.3    Fowler, P.W.4    Jousset, A.5
  • 78
    • 80054046713 scopus 로고    scopus 로고
    • Competition-colonization trade-offs in a ciliate model community
    • Limberger, R. & Wickham, S. (2011) Competition-colonization trade-offs in a ciliate model community. Oecologia, 167, 723-732.
    • (2011) Oecologia , vol.167 , pp. 723-732
    • Limberger, R.1    Wickham, S.2
  • 79
    • 0043130217 scopus 로고    scopus 로고
    • Meta-ecosystems: a theoretical framework for a spatial ecosystem ecology
    • Loreau, M., Mouquet, N. & Holt, R.D. (2003) Meta-ecosystems: a theoretical framework for a spatial ecosystem ecology. Ecology Letters, 6, 673-679.
    • (2003) Ecology Letters , vol.6 , pp. 673-679
    • Loreau, M.1    Mouquet, N.2    Holt, R.D.3
  • 80
    • 33746076074 scopus 로고
    • Contribution to the theory of periodic reactions
    • Lotka, A.J. (1910) Contribution to the theory of periodic reactions. Journal of Physical Chemistry, 14, 271-274.
    • (1910) Journal of Physical Chemistry , vol.14 , pp. 271-274
    • Lotka, A.J.1
  • 81
    • 0000386086 scopus 로고
    • Coexistence in laboratory populations of Paramecium aurelia and its predator Didinium nasutum
    • Luckinbill, L.S. (1973) Coexistence in laboratory populations of Paramecium aurelia and its predator Didinium nasutum. Ecology, 54, 1320-1327.
    • (1973) Ecology , vol.54 , pp. 1320-1327
    • Luckinbill, L.S.1
  • 82
    • 0001256338 scopus 로고
    • The effects of space and enrichment on a predator-prey system
    • Luckinbill, L.S. (1974) The effects of space and enrichment on a predator-prey system. Ecology, 55, 1142-1147.
    • (1974) Ecology , vol.55 , pp. 1142-1147
    • Luckinbill, L.S.1
  • 83
    • 0000904903 scopus 로고
    • Selection and the r/K continuum in experimental populations of protozoa
    • Luckinbill, L.S. (1979) Selection and the r/K continuum in experimental populations of protozoa. American Naturalist, 113, 427-437.
    • (1979) American Naturalist , vol.113 , pp. 427-437
    • Luckinbill, L.S.1
  • 84
    • 84866721914 scopus 로고    scopus 로고
    • Interaction of species traits and environmental disturbance predicts invasion success of aquatic microorganisms
    • Mächler, E. & Altermatt, F. (2012) Interaction of species traits and environmental disturbance predicts invasion success of aquatic microorganisms. PLoS ONE, 7, e45400.
    • (2012) PLoS ONE , vol.7 , pp. e45400
    • Mächler, E.1    Altermatt, F.2
  • 85
    • 78349248292 scopus 로고    scopus 로고
    • Host growth conditions influence experimental evolution of life history and virulence of a parasite with vertical and horizontal transmission
    • Magalon, H., Nidelet, T., Martin, G. & Kaltz, O. (2010) Host growth conditions influence experimental evolution of life history and virulence of a parasite with vertical and horizontal transmission. Evolution, 64, 2126-2138.
    • (2010) Evolution , vol.64 , pp. 2126-2138
    • Magalon, H.1    Nidelet, T.2    Martin, G.3    Kaltz, O.4
  • 87
    • 0030718540 scopus 로고    scopus 로고
    • Biodiversity regulates ecosystem predictability
    • McGrady-Steed, J., Harris, P.M. & Morin, P.J. (1997) Biodiversity regulates ecosystem predictability. Nature, 390, 162-165.
    • (1997) Nature , vol.390 , pp. 162-165
    • McGrady-Steed, J.1    Harris, P.M.2    Morin, P.J.3
  • 88
    • 39749191907 scopus 로고    scopus 로고
    • Complete mitochondrial genome sequence of three Tetrahymena species reveals mutation hot spots and accelerated nonsynonymous substitutions in Ymf genes
    • Moradian, M.M., Beglaryan, D., Skozylas, J.M. & Kerikorian, V. (2007) Complete mitochondrial genome sequence of three Tetrahymena species reveals mutation hot spots and accelerated nonsynonymous substitutions in Ymf genes. PLoS ONE, 2, e650.
    • (2007) PLoS ONE , vol.2 , pp. e650
    • Moradian, M.M.1    Beglaryan, D.2    Skozylas, J.M.3    Kerikorian, V.4
  • 89
    • 77954593857 scopus 로고    scopus 로고
    • Using experimental indices to quantify the strength of species interactions
    • Novak, M. & Wootton, J.T. (2010) Using experimental indices to quantify the strength of species interactions. Oikos, 119, 1057-1063.
    • (2010) Oikos , vol.119 , pp. 1057-1063
    • Novak, M.1    Wootton, J.T.2
  • 91
    • 84870260174 scopus 로고    scopus 로고
    • CBOL protist working group: barcoding eukaryotic richness beyond the animal, plant, and fungal kingdoms
    • Pawlowski, J., Audic, S.P., Adl, S., Bass, D., Belbahri, L.D., Berney, C.D. et al. (2012) CBOL protist working group: barcoding eukaryotic richness beyond the animal, plant, and fungal kingdoms. PLoS Biology, 10, e1001419.
    • (2012) PLoS Biology , vol.10 , pp. e1001419
    • Pawlowski, J.1    Audic, S.P.2    Adl, S.3    Bass, D.4    Belbahri, L.D.5    Berney, C.D.6
  • 92
    • 84877910050 scopus 로고    scopus 로고
    • Implementing image analysis in laboratory-based experimental systems for ecology and evolution: a hands-on guide
    • Pennekamp, F. & Schtickzelle, N. (2013) Implementing image analysis in laboratory-based experimental systems for ecology and evolution: a hands-on guide. Methods in Ecology and Evolution, 4, 483-492.
    • (2013) Methods in Ecology and Evolution , vol.4 , pp. 483-492
    • Pennekamp, F.1    Schtickzelle, N.2
  • 93
    • 84922413356 scopus 로고    scopus 로고
    • Bemovi, software for extracting BEhaviour and MOrphology from VIdeos
    • Pennekamp, F., Schtickzelle, N. & Petchey, O.L. (2014a). Bemovi, software for extracting BEhaviour and MOrphology from VIdeos. bioRxiv, doi: 10.1101/011072.
    • (2014) bioRxiv
    • Pennekamp, F.1    Schtickzelle, N.2    Petchey, O.L.3
  • 94
    • 84905222849 scopus 로고    scopus 로고
    • Dispersal propensity in Tetrahymena thermophila ciliates - a reaction norm perspective
    • Pennekamp, F., Mitchell, K.A., Chaine, A. & Schtickzelle, N. (2014b) Dispersal propensity in Tetrahymena thermophila ciliates - a reaction norm perspective. Evolution, 68, 2319-2330.
    • (2014) Evolution , vol.68 , pp. 2319-2330
    • Pennekamp, F.1    Mitchell, K.A.2    Chaine, A.3    Schtickzelle, N.4
  • 95
    • 0033804458 scopus 로고    scopus 로고
    • Prey diversity, prey composition, and predator population dynamics in experimental microcosms
    • Petchey, O.L. (2000) Prey diversity, prey composition, and predator population dynamics in experimental microcosms. Journal of Animal Ecology, 69, 874-882.
    • (2000) Journal of Animal Ecology , vol.69 , pp. 874-882
    • Petchey, O.L.1
  • 96
    • 0033523902 scopus 로고    scopus 로고
    • Environmental warming alters food-web structure and ecosystem function
    • Petchey, O.L., McPhearson, P.T., Casey, T.M. & Morin, P.J. (1999) Environmental warming alters food-web structure and ecosystem function. Nature, 402, 69-72.
    • (1999) Nature , vol.402 , pp. 69-72
    • Petchey, O.L.1    McPhearson, P.T.2    Casey, T.M.3    Morin, P.J.4
  • 97
    • 84922413355 scopus 로고    scopus 로고
    • Contributions of aquatic model systems to our understanding of biodiversity and ecosystem functioning. Biodiversity and Ecosystem Functioning: Synthesis and Perspectives.
    • Petchey, O.L., Morin, P.J., Hulot, F.D., Loreau, M., McGrady-Steed, J. & Naeem, S. (2002) Contributions of aquatic model systems to our understanding of biodiversity and ecosystem functioning. Biodiversity and Ecosystem Functioning: Synthesis and Perspectives, pp. 127-138.
    • (2002) , pp. 127-138
    • Petchey, O.L.1    Morin, P.J.2    Hulot, F.D.3    Loreau, M.4    McGrady-Steed, J.5    Naeem, S.6
  • 98
    • 84982366676 scopus 로고
    • Two sources of error in the Oxygen light and dark bottle method
    • Pratt, D.M. & Berkson, H. (1959) Two sources of error in the Oxygen light and dark bottle method. Limnology and Oceanography, 4, 328-334.
    • (1959) Limnology and Oceanography , vol.4 , pp. 328-334
    • Pratt, D.M.1    Berkson, H.2
  • 101
    • 14844304392 scopus 로고    scopus 로고
    • The importance of bacterivorous protists in the decomposition of stream leaf litter
    • Ribblett, S.G., Palmer, M.A. & Coats, D.W. (2005) The importance of bacterivorous protists in the decomposition of stream leaf litter. Freshwater Biology, 50, 516-526.
    • (2005) Freshwater Biology , vol.50 , pp. 516-526
    • Ribblett, S.G.1    Palmer, M.A.2    Coats, D.W.3
  • 103
    • 20744447366 scopus 로고    scopus 로고
    • The combined effects of energy and disturbance on species richness in protist microcosms
    • Scholes, L., Warren, P.H. & Beckerman, A.P. (2005) The combined effects of energy and disturbance on species richness in protist microcosms. Ecology Letters, 8, 730-738.
    • (2005) Ecology Letters , vol.8 , pp. 730-738
    • Scholes, L.1    Warren, P.H.2    Beckerman, A.P.3
  • 105
    • 84899014131 scopus 로고    scopus 로고
    • Active colonization dynamics and diversity patterns are influenced by dendritic network connectivity and species interactions
    • Seymour, M. & Altermatt, F. (2014) Active colonization dynamics and diversity patterns are influenced by dendritic network connectivity and species interactions. Ecology and Evolution, 4, 1243-1254.
    • (2014) Ecology and Evolution , vol.4 , pp. 1243-1254
    • Seymour, M.1    Altermatt, F.2
  • 106
    • 84901250298 scopus 로고    scopus 로고
    • Genome-defence small RNAs exapted for epigenetic mating-type inheritance
    • Singh, D.P., Saudemont, B., Guglielmi, G., Arnaiz, O., Gout, J.F., Prajer, M. et al. (2014) Genome-defence small RNAs exapted for epigenetic mating-type inheritance. Nature, 509, 447-452.
    • (2014) Nature , vol.509 , pp. 447-452
    • Singh, D.P.1    Saudemont, B.2    Guglielmi, G.3    Arnaiz, O.4    Gout, J.F.5    Prajer, M.6
  • 107
    • 84981838042 scopus 로고
    • Methods in the general biology and genetics of Paramecium aurelia
    • Sonneborn, T.M. (1950) Methods in the general biology and genetics of Paramecium aurelia. Journal of Experimental Zoology, 113, 87-147.
    • (1950) Journal of Experimental Zoology , vol.113 , pp. 87-147
    • Sonneborn, T.M.1
  • 109
    • 0033592999 scopus 로고    scopus 로고
    • Methylation of histone H3 at lysine 4 is highly conserved and correlates with transcriptionally active nuclei in Tetrahymena
    • Strahl, B.D., Ohba, R., Cook, R.G. & Allis, C.D. (1999) Methylation of histone H3 at lysine 4 is highly conserved and correlates with transcriptionally active nuclei in Tetrahymena. Proceedings of the National Academy of Sciences, USA, 96, 14967-14972.
    • (1999) Proceedings of the National Academy of Sciences, USA , vol.96 , pp. 14967-14972
    • Strahl, B.D.1    Ohba, R.2    Cook, R.G.3    Allis, C.D.4
  • 111
    • 78650242066 scopus 로고    scopus 로고
    • Experimental evolution of protozoan traits in response to interspecific competition
    • TerHorst, C.P. (2010) Experimental evolution of protozoan traits in response to interspecific competition. Journal of Evolutionary Biology. 24, 36-46.
    • (2010) Journal of Evolutionary Biology , vol.24 , pp. 36-46
    • TerHorst, C.P.1
  • 112
    • 0036138203 scopus 로고    scopus 로고
    • Functional genomics: the coming of age for Tetrahymena thermophila
    • Turkewitz, A.P., Orias, E. & Kapler, G. (2002) Functional genomics: the coming of age for Tetrahymena thermophila. Trends in Genetics, 18, 35-40.
    • (2002) Trends in Genetics , vol.18 , pp. 35-40
    • Turkewitz, A.P.1    Orias, E.2    Kapler, G.3
  • 113
    • 0000151238 scopus 로고
    • The competitive structure of communities: an experimental approach with protozoa
    • Vandermeer, J.H. (1969) The competitive structure of communities: an experimental approach with protozoa. Ecology, 50, 362-371.
    • (1969) Ecology , vol.50 , pp. 362-371
    • Vandermeer, J.H.1
  • 114
    • 69249222569 scopus 로고    scopus 로고
    • Phase-locking and environmental fluctuations generate synchrony in a predator-prey community
    • Vasseur, D.A. & Fox, J.W. (2009) Phase-locking and environmental fluctuations generate synchrony in a predator-prey community. Nature, 460, 1007-1010.
    • (2009) Nature , vol.460 , pp. 1007-1010
    • Vasseur, D.A.1    Fox, J.W.2
  • 115
    • 77955609150 scopus 로고    scopus 로고
    • Experimental demonstration of the importance of competition under disturbance
    • Violle, C., Pu, Z. & Jiang, L. (2010) Experimental demonstration of the importance of competition under disturbance. Proceedings of the National Academy of Sciences, USA, 107, 12925-12929.
    • (2010) Proceedings of the National Academy of Sciences, USA , vol.107 , pp. 12925-12929
    • Violle, C.1    Pu, Z.2    Jiang, L.3
  • 116
    • 79960417433 scopus 로고    scopus 로고
    • Phylogenetic limiting similarity and competitive exclusion
    • Violle, C., Nemergut, D.R., Pu, Z. & Jiang, L. (2011) Phylogenetic limiting similarity and competitive exclusion. Ecology Letters, 14, 782-787.
    • (2011) Ecology Letters , vol.14 , pp. 782-787
    • Violle, C.1    Nemergut, D.R.2    Pu, Z.3    Jiang, L.4
  • 117
    • 0006170098 scopus 로고
    • Fluctuations in the abundance of a species considered mathematically
    • Volterra, V. (1926) Fluctuations in the abundance of a species considered mathematically. Nature, 118, 558-560.
    • (1926) Nature , vol.118 , pp. 558-560
    • Volterra, V.1
  • 118
    • 0036275150 scopus 로고    scopus 로고
    • Elemental composition (C, N, P) and cell volume of exponentially growing and nutrient-limited bacterioplankton
    • Vrede, K., Heldal, M., Norland, S. & Bratbak, G. (2002) Elemental composition (C, N, P) and cell volume of exponentially growing and nutrient-limited bacterioplankton. Applied and Environmental Microbiology, 68, 2965-2971.
    • (2002) Applied and Environmental Microbiology , vol.68 , pp. 2965-2971
    • Vrede, K.1    Heldal, M.2    Norland, S.3    Bratbak, G.4
  • 119
    • 70349531263 scopus 로고    scopus 로고
    • Single-cell ecophysiology of microbes as revealed by Raman microspectroscopy or secondary ion mass spectrometry imaging
    • Wagner, M. (2009) Single-cell ecophysiology of microbes as revealed by Raman microspectroscopy or secondary ion mass spectrometry imaging. Annual Review of Microbiology, 63, 411-429.
    • (2009) Annual Review of Microbiology , vol.63 , pp. 411-429
    • Wagner, M.1
  • 120
    • 0030303561 scopus 로고    scopus 로고
    • Dispersal and destruction in a multiple habitat system: an experimental approach using protist communities
    • Warren, P.H. (1996) Dispersal and destruction in a multiple habitat system: an experimental approach using protist communities. Oikos, 77, 317-325.
    • (1996) Oikos , vol.77 , pp. 317-325
    • Warren, P.H.1
  • 121
    • 69549116372 scopus 로고    scopus 로고
    • Context-dependent effects of predator removal from experimental microcosm communities
    • Worsfold, N.T., Warren, P.H. & Petchey, O.L. (2009) Context-dependent effects of predator removal from experimental microcosm communities. Oikos, 118, 1319-1326.
    • (2009) Oikos , vol.118 , pp. 1319-1326
    • Worsfold, N.T.1    Warren, P.H.2    Petchey, O.L.3
  • 122
    • 84863053735 scopus 로고    scopus 로고
    • Transcriptome analysis of the model protozoan, Tetrahymena thermophila, using deep RNA sequencing
    • Xiong, J., Lu, X., Zhou, Z., Chang, Y., Yuan, D., Tian, M. et al. (2012) Transcriptome analysis of the model protozoan, Tetrahymena thermophila, using deep RNA sequencing. PLoS ONE, 7, e30630.
    • (2012) PLoS ONE , vol.7 , pp. e30630
    • Xiong, J.1    Lu, X.2    Zhou, Z.3    Chang, Y.4    Yuan, D.5    Tian, M.6
  • 123
    • 84873080128 scopus 로고    scopus 로고
    • Restricted distribution and limited gene flow in the model ciliate Tetrahymena thermophila
    • Zufall, R.A., Dimon, K.L. & Doerder, F.P. (2013) Restricted distribution and limited gene flow in the model ciliate Tetrahymena thermophila. Molecular Ecology, 22, 1081-1091.
    • (2013) Molecular Ecology , vol.22 , pp. 1081-1091
    • Zufall, R.A.1    Dimon, K.L.2    Doerder, F.P.3


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