Experimental evidence for strong stabilizing forces at high functional diversity of aquatic microbial communities

Ecology

Volumn 96, Issue 5, 2015, Pages 1340-1350

  Carrara, Francesco ^a,b   Giometto, Andrea ^a,c   Seymour, Mathew ^c   Rinaldo, Andrea ^a,d   Altermatt, Florian ^c,e   Hillebrand, H ^f  

^a EPFL   (Switzerland)

^b USA   (United States)

^c SWISS FEDERAL INSTITUTE OF AQUATIC SCIENCE AND TECHNOLOGY   (Switzerland)

^d UNIVERSITY OF PADOVA   (Italy)

^e UNIVERSITY OF ZURICH   (Switzerland)

^f NONE

Author keywords

Biodiversity ecosystem functioning; Community assembly; Community dynamics; Ecological networks; Functional diversity; Interaction experiment; Interaction matrix; Interaction strength; Protist microcosm; Protists; Stability

Indexed keywords

ADAKITE; AQUATIC COMMUNITY; COEXISTENCE; EUKARYOTE; FUNCTIONAL GROUP; MICROBIAL ACTIVITY; RELATEDNESS;

EUKARYOTA; PROTISTA;

ANIMAL; BIODIVERSITY; EUKARYOTE; FOOD CHAIN; MICROBIOLOGY; PHYSIOLOGY; ROTIFERA;

ANIMALS; BIODIVERSITY; EUKARYOTA; FOOD CHAIN; ROTIFERA; WATER MICROBIOLOGY;

EID: 84929103597     PISSN: 00129658     EISSN: None     Source Type: Journal    
DOI: 10.1890/14-1324.1     Document Type: Article

References (59)

1. Adl, S. M., et al. 2012. The revised classification of eukaryotes. Journal of Eukaryotic Microbiology 59:429-514.
2. Allan, E., W. Weisser, C. Rosher, M. Fisher, and H. Hillebrand. 2011. More diverse plant communities have higher functioning over time due to turnover in complementarity dominant species. Proceedings of the National Academy of Sciences USA 108:17034-17039.
3. Allesina, S., and J. M. Levine. 2011. A competitive network theory of species diversity. Proceedings of the National Academy of Sciences USA 108:5638-5642.
4. Allesina, S., and S. Tang. 2012. Stability criteria for complex ecosystems. Nature 483:205-208.
5. Altermatt, F., A. Bieger, F. Carrara, A. Rinaldo, and M. Holyoak. 2011. Effects of connectivity and recurrent local disturbances on community structure and population density in experimental metacommunities. PLoS ONE 6:e19525.
6. Amarasekare, P. 2002. Interference competition and species coexistence. Proceedings of the Royal Society B 269:2541-2550.
7. Bastolla, U., M. Lassig, S. C. Manrubia, and A. Valleriani. 2005. Biodiversity in model ecosystems, I: coexistence conditions for competing species. Journal of Theoretical Biology 235:521-530.
8. Bruno, J. F., S. C. Lee, J. S. Kersetz, R. C. Carpenter, Z. T. Long, and E. Duffy. 2006. Partitioning the effects of algal species identity and richness on benthic marine primary production. Oikos 115:170-178.
9. Cadotte, M. W. 2013. Experimental evidence that evolutionarily diverse assemblages result in higher productivity. Proceedings of the National Academy of Sciences USA 110:8996-9000.
10. Cardinale, B. J. 2011. Biodiversity improves water quality through nice partitioning. Nature 472:86-89.
11. Cardinale, B. J., K. Gross, K. Fritschie, P. Flombaum, J. W. Fox, C. Rixen, J. van Ruijven, M. Scherer-Lorenzen, and B. Wilsey. 2013. Biodiversity simultaneously enhances the production and stability of community biomass, but the effects are independent. Ecology 94:1697-1707.
12. Carrara, F., F. Altermatt, I. Rodriguez-Iturbe, and A. Rinaldo. 2012. Dendritic connectivity controls biodiversity patterns in experimental metacommunities. Proceedings of the National Academy of Sciences USA 109:5761-5766.
13. Carrara, F., A. Rinaldo, A. Giometto, and F. Altermatt. 2014. Complex interaction of dendritic connectivity and hierarchical patch size on biodiversity in river-like landscapes. American Naturalist 183:13-25.
14. Case, T. J., and E. A. Bender. 1981. Testing for higher order interactions. American Naturalist 118:920-929.
15. Chesson, P. 2000. Mechanisms of maintenance of species diversity. Annual Review of Ecology and Systematics 31: 343-366.
16. Chesson, P., and J. J. Kuang. 2008. The interaction between predation and competition. Nature 456:235-238.
17. DeLong, J. P., and D. A. Vasseur. 2012. Size-density scaling in protists and the links between consumer-resource interactions parameters. Journal of Animal Ecology 81:1193-1201.
18. Donohue, I., O. L. Petchey, J. M. Montoya, A. L. Jackson, L. McNally, M. Viana, K. Healy, M. Lurgi, N. E. O'Connor, and M. C. Emmerson. 2013. On the dimensionality of ecological stability. Ecology Letters 16:421-429.
19. Duffy, J. E., B. J. Cardinale, K. E. France, P. B. McIntyre, E. Thebault, and M. Loreau. 2007. The functional role of biodiversity in ecosystems: incorporating trophic complexity. Ecology Letters 10:522-538.
20. Faust, K., and J. Raes. 2012. Microbial interactions: from network to models. Nature Review Microbiology 10:538-549.
21. Finke, D. L., and W. E. Snyder. 2008. Niche partitioning increases resource exploitation by diverse communities. Science 321:1488-1490.
22. Foster, K. R., and T. Bell. 2012. Competition, not cooperation, dominates interactions among culturable microbial species. Current Biology 22:1845-1850.
23. Fox, J. W., and J. McGrady-Steed. 2002. Stability and complexity in microcosm communities. Journal of Animal Ecology 71:749-756.
24. Freilich, S., R. Zarecki, O. Eilam, E. S. Segal, C. S. Henry, M. Kupiec, U. Gophna, R. Sharan, and E. Ruppin. 2011. Competitive and cooperative metabolic interactions in bacterial communities. Nature Communications 2:589.
25. Gillespie, D. T. 1977. Exact stochastic simulation of coupled chemical-reactions. Journal of Physical Chemistry 81:2340-2361.
26. Giometto, A., F. Altermatt, F. Carrara, A. Maritan, and A. Rinaldo. 2013. Scaling body-size fluctuations. Proceedings of the National Academy of Sciences USA 110:4646-4650.
27. Glucksman, E., T. Bell, R. I. Griffiths, and D. Bass. 2010. Closely related protist strains have different grazing impacts on natural bacterial communities. Environmental Microbiology 12:3105-3113.
28. Griffin, J. N., K. L. de la Haye, S. J. Hawkins, R. C. Thompson, and S. R. Jenkins. 2008. Predator diversity and ecosystem functioning: density modifies the effect of resource partitioning. Ecology 89:298-305.
29. Haddad, N. M., G. M. Crutsinger, K. Gross, J. Haarstad, and D. Tilman. 2011. Plant diversity and the stability of foodwebs. Ecology Letters 14:42-46.
30. Heemsbergen, D. A., M. P. Berg, M. Loreau, J. R. van Hal, J. H. Faber, and H. A. Verhoef. 2004. Biodiversity effects on soil processes explained by interspecific functional dissimilarity. Science 306:1019-1020.
31. Hillebrand, H., and B. Matthiessen. 2009. Biodiversity in a complex world: consolidation and progress in functional biodiversity research. Ecology Letters 12:1405-1419.
32. Ives, A. R., B. J. Cardinale, and W. E. Snyder. 2005. A synthesis of subdisciplines: predator-prey interactions, and biodiversity and ecosystem functioning. Ecology Letters 8: 102-116.
33. Ives, A. R., and S. R. Carpenter. 2007. Stability and diversity of ecosystems. Science 317:58-62.
34. Jessup, C. M., R. Kassen, S. E. Forde, B. Kerr, A. Buckling, P. B. Rainey, and B. J. M. Bohannan. 2004. Big question, small worlds: microbial model system in ecology. Trends in Ecology & Evolution 19:189-197.
35. Kokkoris, G. D., V. A. A. Jansen, M. Loreau, and A. Y. Troumbis. 2002. Variability in interaction strength and implications for biodiversity. Journal of Animal Ecology 71:362-371.
36. Levine, J. M., and J. HilleRisLambers. 2009. The importance of niches for the maintenance of species diversity. Nature 461: 254-257.
37. Loreau, M. 1998. Separating sampling and other effects in biodiversity experiments.
38. Loreau, M., and C. de Mazancourt. 2013. Biodiversity and ecosystem stability: a synthesis of underlying mechanisms. Ecology Letters 16:106-115.
39. Loreau, M., and A. Hector. 2001. Partitioning selection and complementarity in biodiversity experiments. Nature 412:72-76.
40. Loreau, M., et al. 2001. Ecology-biodiversity and ecosystem functioning: current knowledge and future challenges. Science 294:804-808.
41. MacArthur, R., and R. Levins. 1967. The limiting similarity, convergence, and divergence of coexisting species. American Naturalist 101:377-385.
42. Machler, E., and F. Altermatt. 2012. Interaction of species traits and environmental disturbance predicts invasion success of aquatic microorganisms. PLoS ONE 7:e45400.
43. May, R. M. 1972. Will a large complex system be stable? Nature 238:413-415.
44. McCann, K. S. 2000. The diversity-stability debate. Nature 405:228-233.
45. McGrady-Steed, J., P. M. Harris, and P. J. Morin. 1997. Biodiversity regulates ecosystem predictability. Nature 390: 162-165.
46. Peay, K. G., M. Belisle, and T. Fukami. 2012. Phylogenetic relatedness predicts priority effects in nectar yeast communities. Proceedings of the Royal Society B 279:749-758.
47. Petchey, O. L., and K. J. Gaston. 2002. Functional diversity (FD), species richness and community composition. Ecology Letters 5:402-411.
48. Ruesink, J. L., and D. S. Srivastava. 2001. Numerical and per capita responses to species loss: mechanisms maintaining ecosystem function in a community of stream insect detritivores. Oikos 93:221-234.
49. Saleem, M., I. Fetzer, C. F. Dormann, H. Harms, and A. Chatzinotas. 2012. Predator richness increases the effect of prey diversity on prey yield. Nature Communications 3:1305.
50. Sole, R. V., and J. M. Montoya. 2001. Complexity and fragility in ecological networks. Proceedings of the Royal Society B 268:2039-2045.
51. Stouffer, D. B., and J. Bascompte. 2011. Compartmentalization increases food-web persistence. Proceedings of the National Academy of Sciences USA 108:3648-3652.
52. Suweis, S., F. Simini, J. Banavar, and A. Maritan. 2013. Emergence of structural and dynamical properties of ecological mutualistic networks. Nature 500:449-452.
53. Tan, J., Z. Pu, A. R. Wade, and L. Jiang. 2012. Species phylogenetic relatedness, priority effects, and ecosystem functioning. Ecology 93:1164-1172.
54. Tilman, D., C. L. Lehman, and C. E. Bristow. 1998. Diversitystability relationships: Statistical inevitability or ecological consequence? American Naturalist 151:277-282.
55. Tilman, D., P. B. Reich, J. Knops, D. Wedin, T. Mielke, and C. Lehman. 2001. Diversity and productivity in a long-term grassland experiment. Science 294:843-845.
56. Turnbull, L. A., J. M. Levine, M. Loreau, and A. Hector. 2013. Coexistence, niches and biodiversity effects on ecosystem functioning. Ecology Letters 16:116-127.
57. Vandermeer, J. H. 1969. The competitive structure of communities: an experimental approach with protozoa. Ecology 50: 362-371.
58. Violle, C., D. R. Nemergut, Z. Pu, and L. Jiang. 2011. Phylogenetic limiting similarity and competitive exclusion. Ecology Letters 14:782-787.
59. White, E. P., S. K., M. Ernest, A. J. Kerkhoff, and B. J. Enquist. 2007. Relationships between body size and abundance in ecology. Trends in Ecology & Evolution 22:323-330.