-
2
-
-
0141765883
-
Fabrication of Novel Biomaterials Through Molecular Self-assembly
-
Zhang, S. G. Fabrication of Novel Biomaterials Through Molecular Self-assembly Nat. Biotechnol. 2003, 21, 1171-1178
-
(2003)
Nat. Biotechnol.
, vol.21
, pp. 1171-1178
-
-
Zhang, S.G.1
-
3
-
-
0030432302
-
Crystalline Bacterial Cell Surface Layers (S-layers): From Cell Structure to Biomimetics
-
Sara, M.; Sleytr, U. B. Crystalline Bacterial Cell Surface Layers (S-layers): From Cell Structure to Biomimetics Prog. Biophys. Mol. Biol. 1996, 65, 83-111
-
(1996)
Prog. Biophys. Mol. Biol.
, vol.65
, pp. 83-111
-
-
Sara, M.1
Sleytr, U.B.2
-
4
-
-
33746377894
-
Protein Misfolding, Functional Amyloid, and Human Disease
-
Chiti, F.; Dobson, C. M. Protein Misfolding, Functional Amyloid, and Human Disease Annu. Rev. Biochem. 2006, 75, 333-366
-
(2006)
Annu. Rev. Biochem.
, vol.75
, pp. 333-366
-
-
Chiti, F.1
Dobson, C.M.2
-
5
-
-
77953645331
-
Nanomaterials Based on DNA
-
Kornberg, R. D. Raetz, C. R. H. Rothman, J. E. Thorner, J. W. Annual Reviews: Palo Alto, CA
-
Seeman, N. C. Nanomaterials Based on DNA. In Annual Review of Biochemistry; Kornberg, R. D.; Raetz, C. R. H.; Rothman, J. E.; Thorner, J. W., Eds.; Annual Reviews: Palo Alto, CA, 2010; Vol. 79, pp 65-87.
-
(2010)
Annual Review of Biochemistry
, vol.79
, pp. 65-87
-
-
Seeman, N.C.1
-
6
-
-
10844221797
-
DNA-templated Self-assembly of Metallic Nanocomponent Arrays on a Surface
-
Le, J. D.; Pinto, Y.; Seeman, N. C.; Musier-Forsyth, K.; Taton, T. A.; Kiehl, R. A. DNA-templated Self-assembly of Metallic Nanocomponent Arrays on a Surface Nano Lett. 2004, 4, 2343-2347
-
(2004)
Nano Lett.
, vol.4
, pp. 2343-2347
-
-
Le, J.D.1
Pinto, Y.2
Seeman, N.C.3
Musier-Forsyth, K.4
Taton, T.A.5
Kiehl, R.A.6
-
7
-
-
78650151365
-
Orthogonal Protein Decoration of DNA Origami
-
Sacca, B.; Meyer, R.; Erkelenz, M.; Kiko, K.; Arndt, A.; Schroeder, H.; Rabe, K. S.; Niemeyer, C. M. Orthogonal Protein Decoration of DNA Origami Angew. Chem., Int. Ed. 2010, 49, 9378-9383
-
(2010)
Angew. Chem., Int. Ed.
, vol.49
, pp. 9378-9383
-
-
Sacca, B.1
Meyer, R.2
Erkelenz, M.3
Kiko, K.4
Arndt, A.5
Schroeder, H.6
Rabe, K.S.7
Niemeyer, C.M.8
-
8
-
-
84883476778
-
Fabrication of DNA-Templated Te and Bi2Te3 Nanowires by Galvanic Displacement
-
Liu, J. F.; Uprety, B.; Gyawali, S.; Woolley, A. T.; Myung, N. V.; Harb, J. N. Fabrication of DNA-Templated Te and Bi2Te3 Nanowires by Galvanic Displacement Langmuir 2013, 29, 11176-11184
-
(2013)
Langmuir
, vol.29
, pp. 11176-11184
-
-
Liu, J.F.1
Uprety, B.2
Gyawali, S.3
Woolley, A.T.4
Myung, N.V.5
Harb, J.N.6
-
9
-
-
79952130178
-
A Primer to Scaffolded DNA Origami
-
Castro, C. E.; Kilchherr, F.; Kim, D.-N.; Shiao, E. L.; Wauer, T.; Wortmann, P.; Bathe, M.; Dietz, H. A Primer to Scaffolded DNA Origami Nat. Methods 2011, 8, 221-229
-
(2011)
Nat. Methods
, vol.8
, pp. 221-229
-
-
Castro, C.E.1
Kilchherr, F.2
Kim, D.-N.3
Shiao, E.L.4
Wauer, T.5
Wortmann, P.6
Bathe, M.7
Dietz, H.8
-
10
-
-
0346095498
-
Virus-based Toolkit for the Directed Synthesis of Magnetic and Semiconducting Nanowires
-
Mao, C. B.; Solis, D. J.; Reiss, B. D.; Kottmann, S. T.; Sweeney, R. Y.; Hayhurst, A.; Georgiou, G.; Iverson, B.; Belcher, A. M. Virus-based Toolkit for the Directed Synthesis of Magnetic and Semiconducting Nanowires Science 2004, 303, 213-217
-
(2004)
Science
, vol.303
, pp. 213-217
-
-
Mao, C.B.1
Solis, D.J.2
Reiss, B.D.3
Kottmann, S.T.4
Sweeney, R.Y.5
Hayhurst, A.6
Georgiou, G.7
Iverson, B.8
Belcher, A.M.9
-
11
-
-
78651401397
-
Nanostructure Design of Amorphous FePO4 Facilitated by a Virus for 3 v Lithium Ion Battery Cathodes
-
Lee, Y. J.; Belcher, A. M. Nanostructure Design of Amorphous FePO4 Facilitated by a Virus for 3 V Lithium Ion Battery Cathodes J. Mater. Chem. 2011, 21, 1033-1039
-
(2011)
J. Mater. Chem.
, vol.21
, pp. 1033-1039
-
-
Lee, Y.J.1
Belcher, A.M.2
-
13
-
-
75749134925
-
Aplysia CPEB Can Form Prion-like Multimers in Sensory Neurons that Contribute to Long-Term Facilitation
-
Si, K.; Choi, Y. B.; White-Grindley, E.; Majumdar, A.; Kandel, E. R. Aplysia CPEB Can Form Prion-like Multimers in Sensory Neurons that Contribute to Long-Term Facilitation Cell 2010, 140, 421-U179
-
(2010)
Cell
, vol.140
, pp. 421-U179
-
-
Si, K.1
Choi, Y.B.2
White-Grindley, E.3
Majumdar, A.4
Kandel, E.R.5
-
14
-
-
67650809307
-
Functional Amyloids As Natural Storage of Peptide Hormones in Pituitary Secretory Granules
-
Maji, S. K.; Perrin, M. H.; Sawaya, M. R.; Jessberger, S.; Vadodaria, K.; Rissman, R. A.; Singru, P. S.; Nilsson, K. P. R.; Simon, R.; Schubert, D.; al, e. Functional Amyloids As Natural Storage of Peptide Hormones in Pituitary Secretory Granules Science 2009, 325, 328-332
-
(2009)
Science
, vol.325
, pp. 328-332
-
-
Maji, S.K.1
Perrin, M.H.2
Sawaya, M.R.3
Jessberger, S.4
Vadodaria, K.5
Rissman, R.A.6
Singru, P.S.7
Nilsson, K.P.R.8
Simon, R.9
Schubert, D.10
-
15
-
-
33745045946
-
Spatial Persistence of Angular Correlations in Amyloid Fibrils
-
Knowles, T. P. J.; Smith, J. F.; Craig, A.; Dobson, C. M.; Welland, M. E. Spatial Persistence of Angular Correlations in Amyloid Fibrils Phys. Rev. Lett. 2006, 96
-
(2006)
Phys. Rev. Lett.
, pp. 96
-
-
Knowles, T.P.J.1
Smith, J.F.2
Craig, A.3
Dobson, C.M.4
Welland, M.E.5
-
16
-
-
79961211353
-
Nanomechanics of Functional and Pathological Amyloid Materials
-
Knowles, T. P. J.; Buehler, M. J. Nanomechanics of Functional and Pathological Amyloid Materials Nat. Nanotechnol. 2011, 6, 469-479
-
(2011)
Nat. Nanotechnol.
, vol.6
, pp. 469-479
-
-
Knowles, T.P.J.1
Buehler, M.J.2
-
17
-
-
33947515739
-
Spider Silk and Amyloid Fibrils: A Structural Comparison
-
Slotta, U.; Hess, S.; Spiess, K.; Stromer, T.; Serpell, L.; Scheibel, T. Spider Silk and Amyloid Fibrils: A Structural Comparison Macromol. Biosci. 2007, 7, 183-188
-
(2007)
Macromol. Biosci.
, vol.7
, pp. 183-188
-
-
Slotta, U.1
Hess, S.2
Spiess, K.3
Stromer, T.4
Serpell, L.5
Scheibel, T.6
-
18
-
-
60549086612
-
Nanoscale Structures and Mechanics of Barnacle Cement
-
Sullan, R. M. A.; Gunari, N.; Tanur, A. E.; Yuri, C.; Dickinson, G. H.; Orihuela, B.; Rittschof, D.; Walker, G. C. Nanoscale Structures and Mechanics of Barnacle Cement Biofouling 2009, 25, 263-275
-
(2009)
Biofouling
, vol.25
, pp. 263-275
-
-
Sullan, R.M.A.1
Gunari, N.2
Tanur, A.E.3
Yuri, C.4
Dickinson, G.H.5
Orihuela, B.6
Rittschof, D.7
Walker, G.C.8
-
19
-
-
0344490335
-
Conducting Nanowires Built by Controlled Self-assembly of Amyloid Fibers and Selective Metal Deposition
-
Scheibel, T.; Parthasarathy, R.; Sawicki, G.; Lin, X. M.; Jaeger, H.; Lindquist, S. L. Conducting Nanowires Built by Controlled Self-assembly of Amyloid Fibers and Selective Metal Deposition Proc. Natl. Acad. Sci. U.S.A. 2003, 100, 4527-4532
-
(2003)
Proc. Natl. Acad. Sci. U.S.A.
, vol.100
, pp. 4527-4532
-
-
Scheibel, T.1
Parthasarathy, R.2
Sawicki, G.3
Lin, X.M.4
Jaeger, H.5
Lindquist, S.L.6
-
20
-
-
0037466613
-
Casting Metal Nanowires Within Discrete Self-assembled Peptide Nanotubes
-
Reches, M.; Gazit, E. Casting Metal Nanowires Within Discrete Self-assembled Peptide Nanotubes Science 2003, 300, 625-627
-
(2003)
Science
, vol.300
, pp. 625-627
-
-
Reches, M.1
Gazit, E.2
-
21
-
-
84885636147
-
Formation of Functionalized Nanowires by Control of Self-Assembly Using Multiple Modified Amyloid Peptides
-
Sakai, H.; Watanabe, K.; Asanomi, Y.; Kobayashi, Y.; Chuman, Y.; Shi, L. H.; Masuda, T.; Wyttenbach, T.; Bowers, M. T.; Uosaki, K.; Sakaguchi, K. Formation of Functionalized Nanowires by Control of Self-Assembly Using Multiple Modified Amyloid Peptides Adv. Funct. Mater. 2013, 23, 4881-4887
-
(2013)
Adv. Funct. Mater.
, vol.23
, pp. 4881-4887
-
-
Sakai, H.1
Watanabe, K.2
Asanomi, Y.3
Kobayashi, Y.4
Chuman, Y.5
Shi, L.H.6
Masuda, T.7
Wyttenbach, T.8
Bowers, M.T.9
Uosaki, K.10
Sakaguchi, K.11
-
22
-
-
77949261467
-
Nanostructured Films from Hierarchical Self-assembly of Amyloidogenic Proteins
-
Knowles, T. P. J.; Oppenheim, T. W.; Buell, A. K.; Chirgadze, D. Y.; Welland, M. E. Nanostructured Films from Hierarchical Self-assembly of Amyloidogenic Proteins Nat. Nanotechnol. 2010, 5, 204-207
-
(2010)
Nat. Nanotechnol.
, vol.5
, pp. 204-207
-
-
Knowles, T.P.J.1
Oppenheim, T.W.2
Buell, A.K.3
Chirgadze, D.Y.4
Welland, M.E.5
-
23
-
-
4344648815
-
Insulin Amyloid Fibrillation at above 100 degrees C: New Insights into Protein Folding under Extreme Temperatures
-
Arora, A.; Ha, C.; Park, C. B. Insulin Amyloid Fibrillation at Above 100 degrees C: New Insights into Protein Folding Under Extreme Temperatures Protein Sci. 2004, 13, 2429-2436
-
(2004)
Protein Sci.
, vol.13
, pp. 2429-2436
-
-
Arora, A.1
Ha, C.2
Park, C.B.3
-
24
-
-
2342468009
-
The N-terminal Prion Domain of Ure2p Converts from an Unfolded to a Thermally Resistant Conformation Upon Filament Formation
-
Baxa, U.; Ross, P. D.; Wickner, R. B.; Steven, A. C. The N-terminal Prion Domain of Ure2p Converts from an Unfolded to a Thermally Resistant Conformation Upon Filament Formation J. Mol. Biol. 2004, 339, 259-264
-
(2004)
J. Mol. Biol.
, vol.339
, pp. 259-264
-
-
Baxa, U.1
Ross, P.D.2
Wickner, R.B.3
Steven, A.C.4
-
25
-
-
79953851306
-
Reversible Heat-Induced Dissociation of beta(2)-Microglobulin Amyloid Fibrils
-
Kardos, J.; Micsonai, A.; Pal-Gabor, H.; Petrik, E.; Graf, L.; Kovacs, J.; Lee, Y. H.; Naiki, H.; Goto, Y. Reversible Heat-Induced Dissociation of beta(2)-Microglobulin Amyloid Fibrils Biochemistry 2011, 50, 3211-3220
-
(2011)
Biochemistry
, vol.50
, pp. 3211-3220
-
-
Kardos, J.1
Micsonai, A.2
Pal-Gabor, H.3
Petrik, E.4
Graf, L.5
Kovacs, J.6
Lee, Y.H.7
Naiki, H.8
Goto, Y.9
-
26
-
-
44949181936
-
Amyloids: Friend or foe?
-
Hammer, N. D.; Wang, X.; McGuffie, B. A.; Chapman, M. R. Amyloids: Friend or foe? J. Alzheimer's Dis. 2008, 13, 407-419
-
(2008)
J. Alzheimer's Dis.
, vol.13
, pp. 407-419
-
-
Hammer, N.D.1
Wang, X.2
McGuffie, B.A.3
Chapman, M.R.4
-
27
-
-
74849093672
-
High Stability of Self-Assembled Peptide Nanowires Against Thermal, Chemical, and Proteolytic Attacks
-
Ryu, J.; Park, C. B. High Stability of Self-Assembled Peptide Nanowires Against Thermal, Chemical, and Proteolytic Attacks Biotechnol. Bioeng. 2010, 105, 221-230
-
(2010)
Biotechnol. Bioeng.
, vol.105
, pp. 221-230
-
-
Ryu, J.1
Park, C.B.2
-
28
-
-
0030801746
-
The Structure of Amyloid Fibrils by Electron Microscopy and X-ray Diffraction
-
Sunde, M.; Blake, C. The Structure of Amyloid Fibrils by Electron Microscopy and X-ray Diffraction Adv. Protein Chem. 1997, 50, 123-159
-
(1997)
Adv. Protein Chem.
, vol.50
, pp. 123-159
-
-
Sunde, M.1
Blake, C.2
-
29
-
-
70350134002
-
Natural and Synthetic Prion Structure from X-ray Fiber Diffraction
-
Wille, H.; Bian, W.; McDonald, M.; Kendall, A.; Colby, D. W.; Bloch, L.; Ollesch, J.; Borovinskiy, A. L.; Cohen, F. E.; Prusiner, S. B.; Stubbs, G. Natural and Synthetic Prion Structure from X-ray Fiber Diffraction Proc. Natl. Acad. Sci. U.S.A. 2009, 106, 16990-16995
-
(2009)
Proc. Natl. Acad. Sci. U.S.A.
, vol.106
, pp. 16990-16995
-
-
Wille, H.1
Bian, W.2
McDonald, M.3
Kendall, A.4
Colby, D.W.5
Bloch, L.6
Ollesch, J.7
Borovinskiy, A.L.8
Cohen, F.E.9
Prusiner, S.B.10
Stubbs, G.11
-
30
-
-
79957674907
-
Population of Nonnative States of Lysozyme Variants Drives Amyloid Fibril Formation
-
Buell, A. K.; Dhulesia, A.; Mossuto, M. F.; Cremades, N.; Kumita, J. R.; Dumoulin, M.; Welland, M. E.; Knowles, T. P. J.; Salvatella, X.; Dobson, C. M. Population of Nonnative States of Lysozyme Variants Drives Amyloid Fibril Formation J. Am. Chem. Soc. 2011, 133, 7737-7743
-
(2011)
J. Am. Chem. Soc.
, vol.133
, pp. 7737-7743
-
-
Buell, A.K.1
Dhulesia, A.2
Mossuto, M.F.3
Cremades, N.4
Kumita, J.R.5
Dumoulin, M.6
Welland, M.E.7
Knowles, T.P.J.8
Salvatella, X.9
Dobson, C.M.10
-
31
-
-
0034691594
-
Beta-helix structure and ice-binding properties of a hyperactive antifreeze protein from an insect
-
Graether, S. P.; Kuiper, M. J.; Gagne, S. M.; Walker, V. K.; Jia, Z. C.; Sykes, B. D.; Davies, P. L. beta-helix structure and ice-binding properties of a hyperactive antifreeze protein from an insect Nature 2000, 406, 325-328
-
(2000)
Nature
, vol.406
, pp. 325-328
-
-
Graether, S.P.1
Kuiper, M.J.2
Gagne, S.M.3
Walker, V.K.4
Jia, Z.C.5
Sykes, B.D.6
Davies, P.L.7
-
32
-
-
0023135722
-
Processing of the Initiation Methionine from Proteins - Properties of the Escherichia-Coli Methionine Aminopeptidase and its Gene Structure
-
Benbassat, A.; Bauer, K.; Chang, S. Y.; Myambo, K.; Boosman, A.; Chang, S. Processing of the Initiation Methionine from Proteins-Properties of the Escherichia-Coli Methionine Aminopeptidase and its Gene Structure J. Bacteriol. 1987, 169, 751-757
-
(1987)
J. Bacteriol.
, vol.169
, pp. 751-757
-
-
Benbassat, A.1
Bauer, K.2
Chang, S.Y.3
Myambo, K.4
Boosman, A.5
Chang, S.6
-
33
-
-
0032402888
-
Disulfide Bond Mapping and Structural Characterization of Spruce Budworm Antifreeze Protein
-
Gauthier, S. Y.; Kay, C. M.; Sykes, B. D.; Walker, V. K.; Davies, P. L. Disulfide Bond Mapping and Structural Characterization of Spruce Budworm Antifreeze Protein Eur. J. Biochem. 1998, 258, 445-453
-
(1998)
Eur. J. Biochem.
, vol.258
, pp. 445-453
-
-
Gauthier, S.Y.1
Kay, C.M.2
Sykes, B.D.3
Walker, V.K.4
Davies, P.L.5
-
34
-
-
84857528147
-
Antifreeze Protein from Freeze-Tolerant Grass Has a Beta-Roll Fold with an Irregularly Structured Ice-Binding Site
-
Middleton, A. J.; Marshall, C. B.; Faucher, F.; Bar-Dolev, M.; Braslavsky, I.; Campbell, R. L.; Walker, V. K.; Davies, P. L. Antifreeze Protein from Freeze-Tolerant Grass Has a Beta-Roll Fold with an Irregularly Structured Ice-Binding Site J. Mol. Biol. 2012, 416, 713-724
-
(2012)
J. Mol. Biol.
, vol.416
, pp. 713-724
-
-
Middleton, A.J.1
Marshall, C.B.2
Faucher, F.3
Bar-Dolev, M.4
Braslavsky, I.5
Campbell, R.L.6
Walker, V.K.7
Davies, P.L.8
-
35
-
-
77955491294
-
Predicting Protein Structures with a Multiplayer Online Game
-
Cooper, S.; Khatib, F.; Treuille, A.; Barbero, J.; Lee, J.; Beenen, M.; Leaver-Fay, A.; Baker, D.; Popovic, Z.; Players, F. Predicting Protein Structures with a Multiplayer Online Game Nature 2010, 466, 756-760
-
(2010)
Nature
, vol.466
, pp. 756-760
-
-
Cooper, S.1
Khatib, F.2
Treuille, A.3
Barbero, J.4
Lee, J.5
Beenen, M.6
Leaver-Fay, A.7
Baker, D.8
Popovic, Z.9
Players, F.10
-
36
-
-
84862614975
-
-
University of California: San Francisco, CA
-
Case, D. A.; Darden, T. A.; Cheatham, T. E., III; Simmerling, C. L.; Wang, J.; Duke, R. E.; Luo, R.; Walker, R. C.; Zhang, W.; Merz, K. M.; Roberts, B.; Hayik, S.; Roitberg, A.; Seabra, G.; Swails, J.; Gotz, A. W.; Kolossváry, I.; Wong, K. F.; Paesani, F.; Vanicek, J.; Wolf, R. M.; Liu, J.; Wu, X.; Brozell, S. R.; Steinbrecher, T.; Gohlke, H.; Cai, Q.; Ye, X.; Wang, J.; Hsieh, M.-J.; Cui, G.; Roe, D. R.; Mathews, D. H.; Seetin, M. G.; Salomon-Ferrer, R.; Sagui, C.; Babin, V.; Luchko, T.; Gusarov, S.; Kovalenko, A.; Kollman, P. A. AMBER 12; University of California: San Francisco, CA, 2012.
-
(2012)
AMBER 12
-
-
Case, D.A.1
Darden, T.A.2
Cheatham, T.E.3
Simmerling, C.L.4
Wang, J.5
Duke, R.E.6
Luo, R.7
Walker, R.C.8
Zhang, W.9
Merz, K.M.10
Roberts, B.11
Hayik, S.12
Roitberg, A.13
Seabra, G.14
Swails, J.15
Gotz, A.W.16
Kolossváry, I.17
Wong, K.F.18
Paesani, F.19
Vanicek, J.20
Wolf, R.M.21
Liu, J.22
Wu, X.23
Brozell, S.R.24
Steinbrecher, T.25
Gohlke, H.26
Cai, Q.27
Ye, X.28
Wang, J.29
Hsieh, M.-J.30
Cui, G.31
Roe, D.R.32
Mathews, D.H.33
Seetin, M.G.34
Salomon-Ferrer, R.35
Sagui, C.36
Babin, V.37
Luchko, T.38
Gusarov, S.39
Kovalenko, A.40
Kollman, P.A.41
more..
-
37
-
-
0029878720
-
VMD: Visual Molecular Dynamics
-
Humphrey, W.; Dalke, A.; Schulten, K. VMD: Visual Molecular Dynamics J. Mol. Graphics Modell. 1996, 14, 33-38
-
(1996)
J. Mol. Graphics Modell.
, vol.14
, pp. 33-38
-
-
Humphrey, W.1
Dalke, A.2
Schulten, K.3
-
38
-
-
0034924218
-
Interactions of human NKG2D with its ligands MICA, MICB, and homologs of the mouse RAE-1 protein family
-
Steinle, A.; Li, P.; Morris, D. L.; Groh, V.; Lanier, L.; Strong, R. K.; Spies, T. Interactions of human NKG2D with its ligands MICA, MICB, and homologs of the mouse RAE-1 protein family Immunogenetics 2001, 52, 279-287
-
(2001)
Immunogenetics
, vol.52
, pp. 279-287
-
-
Steinle, A.1
Li, P.2
Morris, D.L.3
Groh, V.4
Lanier, L.5
Strong, R.K.6
Spies, T.7
-
39
-
-
0019873820
-
Estimation of Globular Protein Secondary Structure from Circular-dichroism
-
Provencher, S. W.; Glockner, J. Estimation of Globular Protein Secondary Structure from Circular-dichroism Biochemistry 1981, 20, 33-37
-
(1981)
Biochemistry
, vol.20
, pp. 33-37
-
-
Provencher, S.W.1
Glockner, J.2
-
41
-
-
45849096536
-
Protein Secondary Structure Analyses from Circular Dichroism Spectroscopy: Methods and References Databases
-
Whitmore, L.; Wallace, B. A. Protein Secondary Structure Analyses from Circular Dichroism Spectroscopy: Methods and References Databases Biopolymers 2007, 89, 392-400
-
(2007)
Biopolymers
, vol.89
, pp. 392-400
-
-
Whitmore, L.1
Wallace, B.A.2
-
42
-
-
0034672325
-
Estimation of Protein Secondary Structure from Circular Dichroism Spectra: Comparison of CONTIN, SELCON, and CDSSTR Methods with an Expanded Reference Set
-
Sreerama, N.; Woody, R. W. Estimation of Protein Secondary Structure from Circular Dichroism Spectra: Comparison of CONTIN, SELCON, and CDSSTR Methods with an Expanded Reference Set Anal. Biochem. 2000, 287, 252-260
-
(2000)
Anal. Biochem.
, vol.287
, pp. 252-260
-
-
Sreerama, N.1
Woody, R.W.2
-
43
-
-
34548847733
-
Using Circular Dichroism Spectra to Estimate Protein Secondary Structure
-
Greenfield, N. J. Using Circular Dichroism Spectra to Estimate Protein Secondary Structure Nat. Protoc. 2006, 1, 2876-2890
-
(2006)
Nat. Protoc.
, vol.1
, pp. 2876-2890
-
-
Greenfield, N.J.1
-
44
-
-
0000464103
-
Fluorescent Stains, with Special Reference to Amyloid and Connective Tissues
-
Vassar, P. S.; Culling, C. F. A. Fluorescent Stains, with Special Reference to Amyloid and Connective Tissues Arch. Pathol. 1959, 68, 487-498
-
(1959)
Arch. Pathol.
, vol.68
, pp. 487-498
-
-
Vassar, P.S.1
Culling, C.F.A.2
-
45
-
-
0027502784
-
Thioflavine-T Interaction with Synthetic Alzheimers-disease Beta-amyloid Peptides - Detection of Amyloid Aggregation in Solution
-
Levine, H. Thioflavine-T Interaction with Synthetic Alzheimers-disease Beta-amyloid Peptides-Detection of Amyloid Aggregation in Solution Protein Sci. 1993, 2, 404-410
-
(1993)
Protein Sci.
, vol.2
, pp. 404-410
-
-
Levine, H.1
-
46
-
-
77952320068
-
Molecular Mechanism of Thioflavin-T Binding to Amyloid Fibrils
-
Biancalana, M.; Koide, S. Molecular Mechanism of Thioflavin-T Binding to Amyloid Fibrils Biochim. Biophys. Acta, Proteins Proteomics 2010, 1804, 1405-1412
-
(2010)
Biochim. Biophys. Acta, Proteins Proteomics
, vol.1804
, pp. 1405-1412
-
-
Biancalana, M.1
Koide, S.2
-
47
-
-
0032849874
-
Quantification of Beta-sheet Amyloid Fibril Structures with Thioflavin-T
-
LeVine, H. Quantification of Beta-sheet Amyloid Fibril Structures with Thioflavin-T Amyloid, Prions, Other Protein Aggregates 1999, 309, 274-284
-
(1999)
Amyloid, Prions, Other Protein Aggregates
, vol.309
, pp. 274-284
-
-
Levine, H.1
-
48
-
-
0035918550
-
Effect of Environmental Factors on the Kinetics of Insulin Fibril Formation: Elucidation of the Molecular Mechanism
-
Nielsen, L.; Khurana, R.; Coats, A.; Frokjaer, S.; Brange, J.; Vyas, S.; Uversky, V. N.; Fink, A. L. Effect of Environmental Factors on the Kinetics of Insulin Fibril Formation: Elucidation of the Molecular Mechanism Biochemistry 2001, 40, 6036-6046
-
(2001)
Biochemistry
, vol.40
, pp. 6036-6046
-
-
Nielsen, L.1
Khurana, R.2
Coats, A.3
Frokjaer, S.4
Brange, J.5
Vyas, S.6
Uversky, V.N.7
Fink, A.L.8
-
49
-
-
0033539659
-
Monitoring the Assembly of Ig Light-chain Amyloid Fibrils by Atomic Force Microscopy
-
Ionescu-Zanetti, C.; Khurana, R.; Gillespie, J. R.; Petrick, J. S.; Trabachino, L. C.; Minert, L. J.; Carter, S. A.; Fink, A. L. Monitoring the Assembly of Ig Light-chain Amyloid Fibrils by Atomic Force Microscopy Proc. Natl. Acad. Sci. U.S.A. 1999, 96, 13175-13179
-
(1999)
Proc. Natl. Acad. Sci. U.S.A.
, vol.96
, pp. 13175-13179
-
-
Ionescu-Zanetti, C.1
Khurana, R.2
Gillespie, J.R.3
Petrick, J.S.4
Trabachino, L.C.5
Minert, L.J.6
Carter, S.A.7
Fink, A.L.8
-
50
-
-
0032514748
-
Temperature Dependence of Amyloid Beta-protein Fibrillization
-
Kusumoto, Y.; Lomakin, A.; Teplow, D. B.; Benedek, G. B. Temperature Dependence of Amyloid Beta-protein Fibrillization Proc. Natl. Acad. Sci. U.S.A. 1998, 95, 12277-12282
-
(1998)
Proc. Natl. Acad. Sci. U.S.A.
, vol.95
, pp. 12277-12282
-
-
Kusumoto, Y.1
Lomakin, A.2
Teplow, D.B.3
Benedek, G.B.4
-
51
-
-
34548762001
-
Amyloid Peptides and Proteins in Review
-
Harrison, R. S.; Sharpe, P. C.; Singh, Y.; Fairlie, D. P. Amyloid Peptides and Proteins in Review Rev. Physiol., Biochem. Pharmacol. 2007, 159, 1-77
-
(2007)
Rev. Physiol., Biochem. Pharmacol.
, vol.159
, pp. 1-77
-
-
Harrison, R.S.1
Sharpe, P.C.2
Singh, Y.3
Fairlie, D.P.4
-
52
-
-
0032877134
-
Analysis of Protein Aggregation Kinetics
-
Ferrone, F. Analysis of Protein Aggregation Kinetics Methods Enzymol. 1999, 309, 256-274
-
(1999)
Methods Enzymol.
, vol.309
, pp. 256-274
-
-
Ferrone, F.1
-
53
-
-
27344435254
-
Polyglutamine aggregation nucleation: Thermodynamics of a highly unfavorable protein folding reaction
-
Bhattacharyya, A. M.; Thakur, A. K.; Wetzel, R. Polyglutamine aggregation nucleation: Thermodynamics of a highly unfavorable protein folding reaction Proc. Natl. Acad. Sci. U.S.A. 2005, 102, 15400-15405
-
(2005)
Proc. Natl. Acad. Sci. U.S.A.
, vol.102
, pp. 15400-15405
-
-
Bhattacharyya, A.M.1
Thakur, A.K.2
Wetzel, R.3
-
54
-
-
72149118250
-
An Analytical Solution to the Kinetics of Breakable Filament Assembly
-
Knowles, T. P. J.; Waudby, C. A.; Devlin, G. L.; Cohen, S. I. A.; Aguzzi, A.; Vendruscolo, M.; Terentjev, E. M.; Welland, M. E.; Dobson, C. M. An Analytical Solution to the Kinetics of Breakable Filament Assembly Science 2009, 326, 1533-1537
-
(2009)
Science
, vol.326
, pp. 1533-1537
-
-
Knowles, T.P.J.1
Waudby, C.A.2
Devlin, G.L.3
Cohen, S.I.A.4
Aguzzi, A.5
Vendruscolo, M.6
Terentjev, E.M.7
Welland, M.E.8
Dobson, C.M.9
-
55
-
-
33744925900
-
Prion Disease: Exponential Growth Requires Membrane Binding
-
Cox, D. L.; Singh, R. R. P.; Yang, S. C. Prion Disease: Exponential Growth Requires Membrane Binding Biophys. J. 2006, 90, L77-L79
-
(2006)
Biophys. J.
, vol.90
, pp. 77-L79
-
-
Cox, D.L.1
Singh, R.R.P.2
Yang, S.C.3
-
56
-
-
0037015081
-
Huntington's Disease Age-of-onset Linked to Polyglutamine Aggregation Nucleation
-
Chen, S. M.; Ferrone, F. A.; Wetzel, R. Huntington's Disease Age-of-onset Linked to Polyglutamine Aggregation Nucleation Proc. Natl. Acad. Sci. U.S.A. 2002, 99, 11884-11889
-
(2002)
Proc. Natl. Acad. Sci. U.S.A.
, vol.99
, pp. 11884-11889
-
-
Chen, S.M.1
Ferrone, F.A.2
Wetzel, R.3
-
57
-
-
84901588710
-
Influence of Repeat Numbers on Self-assembly Rates of Repetitive Recombinant Spider Silk Proteins
-
Humenik, M.; Magdeburg, M.; Scheibel, T. Influence of Repeat Numbers on Self-assembly Rates of Repetitive Recombinant Spider Silk Proteins J. Struct. Biol. 2014, 186, 431-437
-
(2014)
J. Struct. Biol.
, vol.186
, pp. 431-437
-
-
Humenik, M.1
Magdeburg, M.2
Scheibel, T.3
-
58
-
-
0016394198
-
Interpretation of the Light Scattering from Long Rods
-
Berne, B. J. Interpretation of the Light Scattering from Long Rods J. Mol. Biol. 1974, 89, 755-758
-
(1974)
J. Mol. Biol.
, vol.89
, pp. 755-758
-
-
Berne, B.J.1
-
59
-
-
0026607545
-
Kinetics of Protein-Protein Association Explained by Brownian Dynamics Computer-simulation
-
Northrup, S. H.; Erickson, H. P. Kinetics of Protein-Protein Association Explained by Brownian Dynamics Computer-simulation Proc. Natl. Acad. Sci. U.S.A. 1992, 89, 3338-3342
-
(1992)
Proc. Natl. Acad. Sci. U.S.A.
, vol.89
, pp. 3338-3342
-
-
Northrup, S.H.1
Erickson, H.P.2
-
60
-
-
0037117519
-
Amyloid Fibers are Water-filled Nanotubes
-
Perutz, M. F.; Finch, J. T.; Berriman, J.; Lesk, A. Amyloid Fibers are Water-filled Nanotubes Proc. Natl. Acad. Sci. U.S.A. 2002, 99, 5591-5595
-
(2002)
Proc. Natl. Acad. Sci. U.S.A.
, vol.99
, pp. 5591-5595
-
-
Perutz, M.F.1
Finch, J.T.2
Berriman, J.3
Lesk, A.4
-
61
-
-
2942616602
-
Evidence for Assembly of Prions with Left-handed Beta 3-helices into Trimers
-
Govaerts, C.; Wille, H.; Prusiner, S. B.; Cohen, F. E. Evidence for Assembly of Prions with Left-handed Beta 3-helices into Trimers Proc. Natl. Acad. Sci. U.S.A. 2004, 101, 8342-8347
-
(2004)
Proc. Natl. Acad. Sci. U.S.A.
, vol.101
, pp. 8342-8347
-
-
Govaerts, C.1
Wille, H.2
Prusiner, S.B.3
Cohen, F.E.4
-
62
-
-
22144432561
-
Molecular Dynamics Simulations Indicate a Possible Role of Parallel Beta-helices in Seeded Aggregation of Poly-Gln
-
Stork, M.; Giese, A.; Kretzschmar, H. A.; Tavan, P. Molecular Dynamics Simulations Indicate a Possible Role of Parallel Beta-helices in Seeded Aggregation of Poly-Gln Biophys. J. 2005, 88, 2442-2451
-
(2005)
Biophys. J.
, vol.88
, pp. 2442-2451
-
-
Stork, M.1
Giese, A.2
Kretzschmar, H.A.3
Tavan, P.4
-
63
-
-
62449276454
-
Left Handed Beta-helix Models for Mammalian Prion Fibrils
-
Kunes, K. C.; Clark, S. C.; Cox, D. L.; Singh, R. R. P. Left Handed Beta-helix Models for Mammalian Prion Fibrils Prion 2008, 2, 81-90
-
(2008)
Prion
, vol.2
, pp. 81-90
-
-
Kunes, K.C.1
Clark, S.C.2
Cox, D.L.3
Singh, R.R.P.4
-
64
-
-
40849120669
-
Amyloid Fibrils of the HET-s(218-289) Prion Form a Beta Solenoid with a Triangular Hydrophobic Core
-
Wasmer, C.; Lange, A.; Van Melckebeke, H.; Siemer, A. B.; Riek, R.; Meier, B. H. Amyloid Fibrils of the HET-s(218-289) Prion Form a Beta Solenoid with a Triangular Hydrophobic Core Science 2008, 319, 1523-1526
-
(2008)
Science
, vol.319
, pp. 1523-1526
-
-
Wasmer, C.1
Lange, A.2
Van Melckebeke, H.3
Siemer, A.B.4
Riek, R.5
Meier, B.H.6
-
65
-
-
84896925534
-
Short Peptides Self-assemble to Produce Catalytic Amyloids
-
Rufo, C. M.; Moroz, Y. S.; Moroz, O. V.; Stohr, J.; Smith, T. A.; Hu, X. Z.; DeGrado, W. F.; Korendovych, I. V. Short Peptides Self-assemble to Produce Catalytic Amyloids Nat. Chem. 2014, 6, 303-309
-
(2014)
Nat. Chem.
, vol.6
, pp. 303-309
-
-
Rufo, C.M.1
Moroz, Y.S.2
Moroz, O.V.3
Stohr, J.4
Smith, T.A.5
Hu, X.Z.6
Degrado, W.F.7
Korendovych, I.V.8
-
66
-
-
84901788736
-
Introducing Charge Transfer Functionality into Prebiotically Relevant Beta-sheet Peptide Fibrils
-
Ivnitski, D.; Amit, M.; Rubinov, B.; Cohen-Luria, R.; Ashkenasy, N.; Ashkenasy, G. Introducing Charge Transfer Functionality into Prebiotically Relevant Beta-sheet Peptide Fibrils Chem. Commun. 2014, 50, 6733-6736
-
(2014)
Chem. Commun.
, vol.50
, pp. 6733-6736
-
-
Ivnitski, D.1
Amit, M.2
Rubinov, B.3
Cohen-Luria, R.4
Ashkenasy, N.5
Ashkenasy, G.6
-
67
-
-
25144489633
-
Mechanism of Thioflavin-T Binding to Amyloid Fibrils
-
Khurana, R.; Coleman, C.; Ionescu-Zanetti, C.; Carter, S. A.; Krishna, V.; Grover, R. K.; Roy, R.; Singh, S. Mechanism of Thioflavin-T Binding to Amyloid Fibrils J. Struct. Biol. 2005, 151, 229-238
-
(2005)
J. Struct. Biol.
, vol.151
, pp. 229-238
-
-
Khurana, R.1
Coleman, C.2
Ionescu-Zanetti, C.3
Carter, S.A.4
Krishna, V.5
Grover, R.K.6
Roy, R.7
Singh, S.8
-
68
-
-
33751119059
-
Characterization of Two Potentially Universal Turn Motifs that Shape the Repeated Five-residues Fold - Crystal Structure of a Lumenal Pentapeptide Repeat Protein from Cyanothece 51142
-
Buchko, G. W.; Ni, S. S.; Robinson, H.; Welsh, E. A.; Pakrasi, H. B.; Kennedy, M. A. Characterization of Two Potentially Universal Turn Motifs that Shape the Repeated Five-residues Fold-Crystal Structure of a Lumenal Pentapeptide Repeat Protein from Cyanothece 51142 Protein Sci. 2006, 15, 2579-2595
-
(2006)
Protein Sci.
, vol.15
, pp. 2579-2595
-
-
Buchko, G.W.1
Ni, S.S.2
Robinson, H.3
Welsh, E.A.4
Pakrasi, H.B.5
Kennedy, M.A.6
-
69
-
-
57149127524
-
The 2 Angstrom Resolution Crystal Structure of HetL, a Pentapeptide Repeat Protein Involved in Regulation of Heterocyst Differentiation in the Cyanobacterium Nostoc Sp Strain PCC 7120
-
Ni, S. S.; Sheldrick, G. M.; Benning, M. M.; Kennedy, M. A. The 2 Angstrom Resolution Crystal Structure of HetL, a Pentapeptide Repeat Protein Involved in Regulation of Heterocyst Differentiation in the Cyanobacterium Nostoc Sp Strain PCC 7120 J. Struct. Biol. 2009, 165, 47-52
-
(2009)
J. Struct. Biol.
, vol.165
, pp. 47-52
-
-
Ni, S.S.1
Sheldrick, G.M.2
Benning, M.M.3
Kennedy, M.A.4
-
70
-
-
48249101260
-
X-ray Structure of Snow Flea Antifreeze Protein Determined by Racemic Crystallization of Synthetic Protein Enantiomers
-
Pentelute, B. L.; Gates, Z. P.; Tereshko, V.; Dashnau, J. L.; Vanderkooi, J. M.; Kossiakoff, A. A.; Kent, S. B. H. X-ray Structure of Snow Flea Antifreeze Protein Determined by Racemic Crystallization of Synthetic Protein Enantiomers J. Am. Chem. Soc. 2008, 130, 9695-9701
-
(2008)
J. Am. Chem. Soc.
, vol.130
, pp. 9695-9701
-
-
Pentelute, B.L.1
Gates, Z.P.2
Tereshko, V.3
Dashnau, J.L.4
Vanderkooi, J.M.5
Kossiakoff, A.A.6
Kent, S.B.H.7
-
71
-
-
79956158949
-
Expression and Characterization of an Antifreeze Protein from the Perennial Rye Grass, Lolium Perenne
-
Lauersen, K. J.; Brown, A.; Middleton, A.; Davies, P. L.; Walker, V. K. Expression and Characterization of an Antifreeze Protein from the Perennial Rye Grass, Lolium Perenne Cryobiology 2011, 62, 194-201
-
(2011)
Cryobiology
, vol.62
, pp. 194-201
-
-
Lauersen, K.J.1
Brown, A.2
Middleton, A.3
Davies, P.L.4
Walker, V.K.5
-
72
-
-
84921773607
-
-
Crystal structure of ydcK from Salmonella cholerae at 2.38 Å resolution. Northeast Structural Genomics target SCR6
-
Benach, J.; Chen, Y.; Vorobiev, S. M.; Seetharaman, J.; Ho, C. K.; Janjua, H.; Conover, K.; Ma, L.-C.; Xiao, R.;. Crystal structure of ydcK from Salmonella cholerae at 2.38 Å resolution. Northeast Structural Genomics target SCR6. http://www.pdb.org/pdb/explore/explore.do?structureId=2PIG.
-
-
-
Benach, J.1
Chen, Y.2
Vorobiev, S.M.3
Seetharaman, J.4
Ho, C.K.5
Janjua, H.6
Conover, K.7
Ma, L.-C.8
Xiao, R.9
-
73
-
-
0037031949
-
A Beta-helical Antifreeze Protein Isoform with Increased Activity - Structural and Functional Insights
-
Leinala, E. K.; Davies, P. L.; Doucet, D.; Tyshenko, M. G.; Walker, V. K.; Jia, Z. C. A Beta-helical Antifreeze Protein Isoform with Increased Activity-Structural and Functional Insights J. Biol. Chem. 2002, 277, 33349-33352
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 33349-33352
-
-
Leinala, E.K.1
Davies, P.L.2
Doucet, D.3
Tyshenko, M.G.4
Walker, V.K.5
Jia, Z.C.6
|