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Volumn 5, Issue 6, 2014, Pages

Improving microbial biogasoline production in Escherichia coli using tolerance engineering

Author keywords

[No Author keywords available]

Indexed keywords

ISOPENTENOL; METHIONINE; PHENOL DERIVATIVE; UNCLASSIFIED DRUG; BIOFUEL; PENTANOL;

EID: 84920903437     PISSN: 21612129     EISSN: 21507511     Source Type: Journal    
DOI: 10.1128/mBio.01932-14.     Document Type: Article
Times cited : (109)

References (46)
  • 1
    • 84865142847 scopus 로고    scopus 로고
    • Microbial engineering for the production of advanced biofuels
    • Peralta-Yahya PP, Zhang F, del Cardayre SB, Keasling JD. 2012. Microbial engineering for the production of advanced biofuels. Nature 488: 320-328. http://dx.doi.org/10.1038/nature11478.
    • (2012) Nature , vol.488 , pp. 320-328
    • Peralta-Yahya, P.P.1    Zhang, F.2    Del Cardayre, S.B.3    Keasling, J.D.4
  • 2
    • 84868628420 scopus 로고    scopus 로고
    • Synthetic pathway for production of fivecarbon alcohols from isopentenyl diphosphate
    • Chou HH, Keasling JD. 2012. Synthetic pathway for production of fivecarbon alcohols from isopentenyl diphosphate. Appl. Environ. Microbiol. 78:7849-7855. http://dx.doi.org/10.1128/AEM.01175-12.
    • (2012) Appl. Environ. Microbiol , vol.78 , pp. 7849-7855
    • Chou, H.H.1    Keasling, J.D.2
  • 3
    • 76649136634 scopus 로고    scopus 로고
    • Pentanol isomer synthesis in engineered microorganisms
    • Cann AF, Liao JC. 2010. Pentanol isomer synthesis in engineered microorganisms. Appl. Microbiol. Biotechnol. 85:893-899. http://dx.doi.org/10.1007/s00253-009-2262-7.
    • (2010) Appl. Microbiol. Biotechnol , vol.85 , pp. 893-899
    • Cann, A.F.1    Liao, J.C.2
  • 4
    • 84876673237 scopus 로고    scopus 로고
    • Metabolic engineering of Escherichia coli for high-specificity production of isoprenol and prenol as next generation of biofuels
    • Zheng YN, Liu Q, Li LL, Qin W, Yang JM, Zhang HB, Jiang XL, Cheng T, Liu W, Xu X, Xian M. 2013. Metabolic engineering of Escherichia coli for high-specificity production of isoprenol and prenol as next generation of biofuels. Biotechnol. Biofuels 6:57. http://dx.doi.org/10.1186/1754-6834-6-57.
    • (2013) Biotechnol. Biofuels , vol.6 , pp. 57
    • Zheng, Y.N.1    Liu, Q.2    Li, L.L.3    Qin, W.4    Yang, J.M.5    Zhang, H.B.6    Jiang, X.L.7    Cheng, T.8    Liu, W.9    Xu, X.10    Xian, M.11
  • 5
    • 35148889024 scopus 로고    scopus 로고
    • Identification of isopentenol biosynthetic genes from Bacillus subtilis by a screening method based on isoprenoid precursor toxicity
    • Withers ST, Gottlieb SS, Lieu B, Newman JD, Keasling JD. 2007. Identification of isopentenol biosynthetic genes from Bacillus subtilis by a screening method based on isoprenoid precursor toxicity. Appl. Environ. Microbiol. 73:6277-6283. http://dx.doi.org/10.1128/AEM.00861-07.
    • (2007) Appl. Environ. Microbiol , vol.73 , pp. 6277-6283
    • Withers, S.T.1    Gottlieb, S.S.2    Lieu, B.3    Newman, J.D.4    Keasling, J.D.5
  • 8
    • 38049001166 scopus 로고    scopus 로고
    • Non-fermentative pathways for synthesis of branched-chain higher alcohols as biofuels
    • Atsumi S, Hanai T, Liao JC. 2008. Non-fermentative pathways for synthesis of branched-chain higher alcohols as biofuels. Nature 451:86-89. http://dx.doi.org/10.1038/nature06450.
    • (2008) Nature , vol.451 , pp. 86-89
    • Atsumi, S.1    Hanai, T.2    Liao, J.C.3
  • 10
    • 6044244835 scopus 로고    scopus 로고
    • Characterization of the Escherichia coli AaeAB efflux pump: A metabolic relief valve
    • Van Dyk TK, Templeton LJ, Cantera KA, Sharpe PL, Sariaslani FS. 2004. Characterization of the Escherichia coli AaeAB efflux pump: a metabolic relief valve? J. Bacteriol. 186:7196-7204. http://dx.doi.org/10.1128/JB.186.21.7196-7204.2004.
    • (2004) J. Bacteriol , vol.186 , pp. 7196-7204
    • Van Dyk, T.K.1    Templeton, L.J.2    Cantera, K.A.3    Sharpe, P.L.4    Sariaslani, F.S.5
  • 11
    • 84877319992 scopus 로고    scopus 로고
    • Transporter-mediated biofuel secretion
    • Doshi R, Nguyen T, Chang G. 2013. Transporter-mediated biofuel secretion. Proc. Natl. Acad. Sci. U. S. A. 110:7642-7647. http://dx.doi.org/10.1073/pnas.1301358110.
    • (2013) Proc. Natl. Acad. Sci. U. S. A , vol.110 , pp. 7642-7647
    • Doshi, R.1    Nguyen, T.2    Chang, G.3
  • 12
    • 84877878130 scopus 로고    scopus 로고
    • Directed evolution of an E. Coli inner membrane transporter for improved efflux of biofuel molecules
    • Foo JL, Leong SS. 2013. Directed evolution of an E. coli inner membrane transporter for improved efflux of biofuel molecules. Biotechnol. Biofuels 6:81. http://dx.doi.org/10.1186/1754-6834-6-81.
    • (2013) Biotechnol. Biofuels , vol.6 , pp. 81
    • Foo, J.L.1    Leong, S.S.2
  • 13
    • 67650685558 scopus 로고    scopus 로고
    • An integrated network approach identifies the isobutanol response network of Escherichia coli
    • Brynildsen MP, Liao JC. 2009. An integrated network approach identifies the isobutanol response network of Escherichia coli. Mol. Syst. Biol. 5:277. http://dx.doi.org/10.1038/msb.2009.34.
    • (2009) Mol. Syst. Biol , vol.5 , pp. 277
    • Brynildsen, M.P.1    Liao, J.C.2
  • 15
    • 84872382030 scopus 로고    scopus 로고
    • GroESL overexpression imparts Escherichia coli tolerance to i-, n-, and 2-butanol, 1,2,4-butanetriol and ethanol with complex and unpredictable patterns
    • Zingaro KA, Terry Papoutsakis E. 2013. GroESL overexpression imparts Escherichia coli tolerance to i-, n-, and 2-butanol, 1,2,4-butanetriol and ethanol with complex and unpredictable patterns. Metab. Eng. 15: 196-205. http://dx.doi.org/10.1016/j.ymben.2012.07.009.
    • (2013) Metab. Eng , vol.15 , pp. 196-205
    • Zingaro, K.A.1    Terry Papoutsakis, E.2
  • 16
    • 84896129574 scopus 로고    scopus 로고
    • Enhancing tolerance to short-chain alcohols by engineering the Escherichia coli AcrB efflux pump to secrete the non-native substrate n-butanol
    • Fisher MA, Boyarskiy S, Yamada MR, Kong N, Bauer S, Tullman-Ercek D. 2013. Enhancing tolerance to short-chain alcohols by engineering the Escherichia coli AcrB efflux pump to secrete the non-native substrate n-butanol. ACS Synth. Biol. 3:30-40. http://dx.doi.org/10.1021/sb400065q.
    • (2013) ACS Synth. Biol , vol.3 , pp. 30-40
    • Fisher, M.A.1    Boyarskiy, S.2    Yamada, M.R.3    Kong, N.4    Bauer, S.5    Tullman-Ercek, D.6
  • 17
    • 44249111668 scopus 로고    scopus 로고
    • Application of functional genomics to pathway optimization for increased isoprenoid production
    • Kizer L, Pitera DJ, Pfleger BF, Keasling JD. 2008. Application of functional genomics to pathway optimization for increased isoprenoid production. Appl. Environ. Microbiol. 74:3229-3241. http://dx.doi.org/10.1128/AEM.02750-07.
    • (2008) Appl. Environ. Microbiol , vol.74 , pp. 3229-3241
    • Kizer, L.1    Pitera, D.J.2    Pfleger, B.F.3    Keasling, J.D.4
  • 18
    • 33847309176 scopus 로고    scopus 로고
    • Balancing a heterologous mevalonate pathway for improved isoprenoid production in Escherichia coli
    • Pitera DJ, Paddon CJ, Newman JD, Keasling JD. 2007. Balancing a heterologous mevalonate pathway for improved isoprenoid production in Escherichia coli. Metab. Eng. 9:193-207. http://dx.doi.org/10.1016/j.ymben.2006.11.002.
    • (2007) Metab. Eng , vol.9 , pp. 193-207
    • Pitera, D.J.1    Paddon, C.J.2    Newman, J.D.3    Keasling, J.D.4
  • 21
    • 84904391398 scopus 로고    scopus 로고
    • Improvement of organic solvent tolerance by disruption of the lon gene in Escherichia coli
    • Watanabe R, Doukyu N. 2014. Improvement of organic solvent tolerance by disruption of the lon gene in Escherichia coli. J. Biosci. Bioeng. 118: 139-144. http://dx.doi.org/10.1016/j.jbiosc.2014.01.011.
    • (2014) J. Biosci. Bioeng , vol.118 , pp. 139-144
    • Watanabe, R.1    Doukyu, N.2
  • 22
    • 33847083318 scopus 로고    scopus 로고
    • Global transcription machinery engineering: A new approach for improving cellular phenotype
    • Alper H, Stephanopoulos G. 2007. Global transcription machinery engineering: a new approach for improving cellular phenotype. Metab. Eng. 9:258-267. http://dx.doi.org/10.1016/j.ymben.2006.12.002.
    • (2007) Metab. Eng , vol.9 , pp. 258-267
    • Alper, H.1    Stephanopoulos, G.2
  • 24
    • 84877158197 scopus 로고    scopus 로고
    • Recombineering to homogeneity: Extension of multiplex recombineering to large-scale genome editing
    • Boyle NR, Reynolds TS, Evans R, Lynch M, Gill RT. 2013. Recombineering to homogeneity: extension of multiplex recombineering to large-scale genome editing. Biotechnol. J. 8:515-522. http://dx.doi.org/10.1002/biot.201200237.
    • (2013) Biotechnol. J , vol.8 , pp. 515-522
    • Boyle, N.R.1    Reynolds, T.S.2    Evans, R.3    Lynch, M.4    Gill, R.T.5
  • 25
    • 0027723739 scopus 로고
    • Cloning and organization of the abc and mdl genes of Escherichia coli: Relationship to eukaryotic multidrug resistance
    • Allikmets R, Gerrard B, Court D, Dean M. 1993. Cloning and organization of the abc and mdl genes of Escherichia coli: relationship to eukaryotic multidrug resistance. Gene 136:231-236. http://dx.doi.org/10.1016/0378-1119(93)90470-N.
    • (1993) Gene , vol.136 , pp. 231-236
    • Allikmets, R.1    Gerrard, B.2    Court, D.3    Dean, M.4
  • 26
    • 0039870135 scopus 로고    scopus 로고
    • IbpA and IbpB, the new heat-shock proteins, bind to endogenous Escherichia coli proteins aggregated intracellularly by heat shock
    • Laskowska E, Wawrzynów A, Taylor A. 1996. IbpA and IbpB, the new heat-shock proteins, bind to endogenous Escherichia coli proteins aggregated intracellularly by heat shock. Biochimie 78:117-122. http://dx.doi.org/10.1016/0300-9084(96)82643-5.
    • (1996) Biochimie , vol.78 , pp. 117-122
    • Laskowska, E.1    Wawrzynów, A.2    Taylor, A.3
  • 27
    • 0036315595 scopus 로고    scopus 로고
    • Escherichia coli small heat shock proteins, IbpA and IbpB, protect enzymes from inactivation by heat and oxidants
    • Kitagawa M, Miyakawa M, Matsumura Y, Tsuchido T. 2002. Escherichia coli small heat shock proteins, IbpA and IbpB, protect enzymes from inactivation by heat and oxidants. Eur. J. Biochem. 269:2907-2917. http://dx.doi.org/10.1046/j.1432-1033.2002.02958.x.
    • (2002) Eur. J. Biochem , vol.269 , pp. 2907-2917
    • Kitagawa, M.1    Miyakawa, M.2    Matsumura, Y.3    Tsuchido, T.4
  • 28
    • 33645542902 scopus 로고    scopus 로고
    • Glucose-6-phosphate dehydrogenase and ferredoxin-NADP(H) reductase contribute to damage repair during the soxRS response of Escherichia coli
    • Giró M, Carrillo N, Krapp AR. 2006. Glucose-6-phosphate dehydrogenase and ferredoxin-NADP(H) reductase contribute to damage repair during the soxRS response of Escherichia coli. Microbiology 152: 1119-1128. http://dx.doi.org/10.1099/mic.0.28612-0.
    • (2006) Microbiology , vol.152 , pp. 1119-1128
    • Giró, M.1    Carrillo, N.2    Krapp, A.R.3
  • 29
    • 33846678393 scopus 로고    scopus 로고
    • Loss of a conserved 7-methylguanosine modification in 16S rRNA confers low-level streptomycin resistance in bacteria
    • Okamoto S, Tamaru A, Nakajima C, Nishimura K, Tanaka Y, Tokuyama S, Suzuki Y, Ochi K. 2007. Loss of a conserved 7-methylguanosine modification in 16S rRNA confers low-level streptomycin resistance in bacteria. Mol. Microbiol. 63:1096-1106. http://dx.doi.org/10.1111/j.1365-2958.2006.05585.x.
    • (2007) Mol. Microbiol , vol.63 , pp. 1096-1106
    • Okamoto, S.1    Tamaru, A.2    Nakajima, C.3    Nishimura, K.4    Tanaka, Y.5    Tokuyama, S.6    Suzuki, Y.7    Ochi, K.8
  • 30
    • 43149093576 scopus 로고    scopus 로고
    • Escherichia coli YqhD exhibits aldehyde reductase activity and protects from the harmful effect of lipid peroxidation-derived aldehydes
    • Pérez JM, Arenas FA, Pradenas GA, Sandoval JM, Vásquez CC. 2008. Escherichia coli YqhD exhibits aldehyde reductase activity and protects from the harmful effect of lipid peroxidation-derived aldehydes. J. Biol. Chem. 283:7346-7353. http://dx.doi.org/10.1074/jbc.M708846200.
    • (2008) J. Biol. Chem , vol.283 , pp. 7346-7353
    • Pérez, J.M.1    Arenas, F.A.2    Pradenas, G.A.3    Sandoval, J.M.4    Vásquez, C.C.5
  • 31
    • 78651093186 scopus 로고    scopus 로고
    • YqhD: A broad-substrate range aldehyde reductase with various applications in production of biorenewable fuels and chemicals
    • Jarboe LR. 2011. YqhD: a broad-substrate range aldehyde reductase with various applications in production of biorenewable fuels and chemicals. Appl. Microbiol. Biotechnol. 89:249-257. http://dx.doi.org/10.1007/s00253-010-2912-9.
    • (2011) Appl. Microbiol. Biotechnol , vol.89 , pp. 249-257
    • Jarboe, L.R.1
  • 33
    • 14044271464 scopus 로고    scopus 로고
    • Oxidative stress inactivates cobalamin-independent methionine synthase (MetE) in Escherichia coli
    • Hondorp ER, Matthews RG. 2004. Oxidative stress inactivates cobalamin-independent methionine synthase (MetE) in Escherichia coli. PLoS Biol2.:e336. http://dx.doi.org/10.1371/journal.pbio.0020336.
    • (2004) Plos Biol , vol.2
    • Hondorp, E.R.1    Matthews, R.G.2
  • 35
    • 11344266685 scopus 로고    scopus 로고
    • Genomic transcriptional response to loss of chromosomal supercoiling in Escherichia coli
    • Peter BJ, Arsuaga J, Breier AM, Khodursky AB, Brown PO, Cozzarelli NR. 2004. Genomic transcriptional response to loss of chromosomal supercoiling in Escherichia coli. Genome Biol. 5:R87. http://dx.doi.org/10.1186/gb-2004-5-11-r87.
    • (2004) Genome Biol , vol.5 , pp. R87
    • Peter, B.J.1    Arsuaga, J.2    Breier, A.M.3    Khodursky, A.B.4    Brown, P.O.5    Cozzarelli, N.R.6
  • 36
    • 0036887272 scopus 로고    scopus 로고
    • In vivo aggregation of a single enzyme limits growth of Escherichia coli at elevated temperatures
    • Gur E, Biran D, Gazit E, Ron EZ. 2002. In vivo aggregation of a single enzyme limits growth of Escherichia coli at elevated temperatures. Mol. Microbiol. 46:1391-1397. http://dx.doi.org/10.1046/j.1365-2958.2002.03257.x.
    • (2002) Mol. Microbiol , vol.46 , pp. 1391-1397
    • Gur, E.1    Biran, D.2    Gazit, E.3    Ron, E.Z.4
  • 38
    • 79952373286 scopus 로고    scopus 로고
    • Absence of diauxie during simultaneous utilization of glucose and xylose by Sulfolobus acidocaldarius
    • Joshua CJ, Dahl R, Benke PI, Keasling JD. 2011. Absence of diauxie during simultaneous utilization of glucose and xylose by Sulfolobus acidocaldarius. J. Bacteriol. 193:1293-1301. http://dx.doi.org/10.1128/JB.01219-10.
    • (2011) J. Bacteriol , vol.193 , pp. 1293-1301
    • Joshua, C.J.1    Dahl, R.2    Benke, P.I.3    Keasling, J.D.4
  • 39
  • 40
    • 65849183178 scopus 로고    scopus 로고
    • Golden gate shuffling: A one-pot DNA shuffling method based on type IIs restriction enzymes
    • Engler C, Gruetzner R, Kandzia R, Marillonnet S. 2009. Golden gate shuffling: a one-pot DNA shuffling method based on type IIs restriction enzymes. PLoS One 4:e5553. http://dx.doi.org/10.1371/journal.pone.0005553.
    • (2009) Plos One , vol.4
    • Engler, C.1    Gruetzner, R.2    Kandzia, R.3    Marillonnet, S.4
  • 41
    • 56649114274 scopus 로고    scopus 로고
    • A one pot, one step, precision cloning method with high throughput capability
    • Engler C, Kandzia R, Marillonnet S. 2008. A one pot, one step, precision cloning method with high throughput capability. PLoS One 3:e3647. http://dx.doi.org/10.1371/journal.pone.0003647.
    • (2008) Plos One , vol.3647 , pp. 3
    • Engler, C.1    Kandzia, R.2    Marillonnet, S.3
  • 42
    • 0025809949 scopus 로고
    • Two divergently transcribed genes, soxR and soxS, control a superoxide response regulon of Escherichia coli
    • Wu J, Weiss B. 1991. Two divergently transcribed genes, soxR and soxS, control a superoxide response regulon of Escherichia coli. J. Bacteriol. 173: 2864-2871.
    • (1991) J. Bacteriol , vol.173 , pp. 2864-2871
    • Wu, J.1    Weiss, B.2
  • 43
    • 1642461445 scopus 로고    scopus 로고
    • Expression of acrB, acrF, acrD, marA, and soxS in Salmonella enterica serovar Typhimurium: Role in multiple antibiotic resistance
    • Eaves DJ, Ricci V, Piddock LJ. 2004. Expression of acrB, acrF, acrD, marA, and soxS in Salmonella enterica serovar Typhimurium: role in multiple antibiotic resistance. Antimicrob. Agents Chemother. 48:1145-1150. http://dx.doi.org/10.1128/AAC.48.4.1145-1150.2004.
    • (2004) Antimicrob. Agents Chemother , vol.48 , pp. 1145-1150
    • Eaves, D.J.1    Ricci, V.2    Piddock, L.J.3
  • 44
    • 0030829520 scopus 로고    scopus 로고
    • Characterization of Escherichia coli NrdH. A glutaredoxin-like protein with a thioredoxin-like activity profile
    • Jordan A, Aslund F, Pontis E, Reichard P, Holmgren A. 1997. Characterization of Escherichia coli NrdH. A glutaredoxin-like protein with a thioredoxin-like activity profile. J. Biol. Chem. 272:18044-18050. http://dx.doi.org/10.1074/jbc.272.29.18044.
    • (1997) J. Biol. Chem , vol.272 , pp. 18044-18050
    • Jordan, A.1    Aslund, F.2    Pontis, E.3    Reichard, P.4    Holmgren, A.5
  • 45
    • 0036606484 scopus 로고    scopus 로고
    • Crystal structure of the Escherichia coli glucose-inhibited division protein B (GidB) reveals a methyltransferase fold
    • Romanowski MJ, Bonanno JB, Burley SK. 2002. Crystal structure of the Escherichia coli glucose-inhibited division protein B (GidB) reveals a methyltransferase fold. Proteins 47:563-567. http://dx.doi.org/10.1002/prot.10121.abs.
    • (2002) Proteins , vol.47 , pp. 563-567
    • Romanowski, M.J.1    Bonanno, J.B.2    Burley, S.K.3
  • 46
    • 84858650505 scopus 로고    scopus 로고
    • Regulation of expression and catalytic activity of Escherichia coli RsmG methyltransferase
    • Benítez-Páez A, Villarroya M, Armengod ME. 2012. Regulation of expression and catalytic activity of Escherichia coli RsmG methyltransferase. RNA 18:795-806. http://dx.doi.org/10.1261/rna.029868.111.
    • (2012) RNA , vol.18 , pp. 795-806
    • Benítez-Páez, A.1    Villarroya, M.2    Armengod, M.E.3


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