-
1
-
-
70349910898
-
Effect of read-mapping biases on detecting allele-specific expression from RNA-sequencing data
-
Degner JF, Marioni JC, Pai AA, Pickrell JK, Nkadori E, et al. (2009) Effect of read-mapping biases on detecting allele-specific expression from RNA-sequencing data. Bioinformatics 25: 3207-3212.
-
(2009)
Bioinformatics
, vol.25
, pp. 3207-3212
-
-
Degner, J.F.1
Marioni, J.C.2
Pai, A.A.3
Pickrell, J.K.4
Nkadori, E.5
-
2
-
-
77951820899
-
Fast and SNP-tolerant detection of complex variants and splicing in short reads
-
Wu TD, Nacu S (2010) Fast and SNP-tolerant detection of complex variants and splicing in short reads. Bioinformatics 26: 873-881.
-
(2010)
Bioinformatics
, vol.26
, pp. 873-881
-
-
Wu, T.D.1
Nacu, S.2
-
3
-
-
84919938493
-
-
Available: Accessed 4 September 2014
-
GSNAP README (version 2013-07-16). Available: http://github.com/julian-gehring/GMAP-GSNAP/blob/master/README. Accessed 4 September 2014.
-
GSNAP README (Version 2013-07-16)
-
-
-
4
-
-
84870568092
-
A new strategy to reduce allelic bias in RNA-Seq readmapping
-
Satya RV, Zavaljevski N, Reifman J (2012) A new strategy to reduce allelic bias in RNA-Seq readmapping. Nucleic Acids Res 40: e127.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. e127
-
-
Satya, R.V.1
Zavaljevski, N.2
Reifman, J.3
-
5
-
-
84881042224
-
Sources of bias in measures of allele-specific expression derived from RNA-sequence data aligned to a single reference genome
-
Stevenson KR, Coolon JD, Wittkopp PJ (2013) Sources of bias in measures of allele-specific expression derived from RNA-sequence data aligned to a single reference genome. BMC Genomics 14: 536.
-
(2013)
BMC Genomics
, vol.14
, pp. 536
-
-
Stevenson, K.R.1
Coolon, J.D.2
Wittkopp, P.J.3
-
6
-
-
80051489977
-
AlleleSeq: Analysis of allele-specific expression and binding in a network framework
-
Rozowsky J, Abyzov A, Wang J, Alves P, Raha D, et al. (2011) AlleleSeq: analysis of allele-specific expression and binding in a network framework. Mol Syst Biol 7: 522.
-
(2011)
Mol Syst Biol
, vol.7
, pp. 522
-
-
Rozowsky, J.1
Abyzov, A.2
Wang, J.3
Alves, P.4
Raha, D.5
-
7
-
-
79751531332
-
Haplotype and isoform specific expression estimation using multi-mapping RNA-seq reads
-
Turro E, Su SY, Goncalves A, Coin LJ, Richardson S, et al. (2011) Haplotype and isoform specific expression estimation using multi-mapping RNA-seq reads. Genome Biol 12: R13.
-
(2011)
Genome Biol
, vol.12
, pp. R13
-
-
Turro, E.1
Su, S.Y.2
Goncalves, A.3
Coin, L.J.4
Richardson, S.5
-
8
-
-
84907543218
-
Estimates of allele-specific expression in Drosophila with a single genome sequence and RNA-seq data
-
Quinn A, Juneja P, Jiggins FM (2014) Estimates of allele-specific expression in Drosophila with a single genome sequence and RNA-seq data. Bioinformatics. doi: 10.1093/bioinformatics/btu342.
-
(2014)
Bioinformatics
-
-
Quinn, A.1
Juneja, P.2
Jiggins, F.M.3
-
9
-
-
84883851164
-
Comparing a few SNP calling algorithms using low-coverage sequencing data
-
Yu X, Sun S (2013) Comparing a few SNP calling algorithms using low-coverage sequencing data. BMC Bioinformatics 14: 274.
-
(2013)
BMC Bioinformatics
, vol.14
, pp. 274
-
-
Yu, X.1
Sun, S.2
-
10
-
-
66449114324
-
SNP detection for massively parallel whole-genome resequencing
-
Li R, Li Y, Fang X, Yang H, Wang J, et al. (2009) SNP detection for massively parallel whole-genome resequencing. Genome Res 19: 1124-1132.
-
(2009)
Genome Res
, vol.19
, pp. 1124-1132
-
-
Li, R.1
Li, Y.2
Fang, X.3
Yang, H.4
Wang, J.5
-
11
-
-
68549104404
-
The Sequence Alignment/Map format and SAMtools
-
Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, et al. (2009) The Sequence Alignment/Map format and SAMtools. Bioinformatics 25: 2078-2079.
-
(2009)
Bioinformatics
, vol.25
, pp. 2078-2079
-
-
Li, H.1
Handsaker, B.2
Wysoker, A.3
Fennell, T.4
Ruan, J.5
-
12
-
-
79955483667
-
A framework for variation discovery and genotyping using next-generation DNA sequencing data
-
DePristo MA, Banks E, Poplin R, Garimella KV, Maguire JR, et al. (2011) A framework for variation discovery and genotyping using next-generation DNA sequencing data. Nat Genet 43: 491-498.
-
(2011)
Nat Genet
, vol.43
, pp. 491-498
-
-
DePristo, M.A.1
Banks, E.2
Poplin, R.3
Garimella, K.V.4
Maguire, J.R.5
-
13
-
-
75649095276
-
A SNP discovery method to assess variant allele probability from next-generation resequencing data
-
Shen Y, Wan Z, Coarfa C, Drabek R, Chen L, et al. (2010) A SNP discovery method to assess variant allele probability from next-generation resequencing data. Genome Res 20: 273-280.
-
(2010)
Genome Res
, vol.20
, pp. 273-280
-
-
Shen, Y.1
Wan, Z.2
Coarfa, C.3
Drabek, R.4
Chen, L.5
-
14
-
-
79960405019
-
The variant call format and VCFtools
-
Danecek P, Auton A, Abecasis G, Albers CA, Banks E, et al. (2011) The variant call format and VCFtools. Bioinformatics 27: 2156-2158.
-
(2011)
Bioinformatics
, vol.27
, pp. 2156-2158
-
-
Danecek, P.1
Auton, A.2
Abecasis, G.3
Albers, C.A.4
Banks, E.5
-
15
-
-
77954763156
-
Genome-wide allele-specific analysis: Insights into regulatory variation
-
Pastinen T (2010) Genome-wide allele-specific analysis: insights into regulatory variation. Nat Rev Genet 11: 533-538.
-
(2010)
Nat Rev Genet
, vol.11
, pp. 533-538
-
-
Pastinen, T.1
-
16
-
-
33747735632
-
Genome-wide transcript analysis of maize hybrids: Allelic additive gene expression and yield heterosis
-
Guo M, Rupe MA, Yang X, Crasta O, Zinselmeier C, et al. (2006) Genome-wide transcript analysis of maize hybrids: allelic additive gene expression and yield heterosis. Theor Appl Genet 113: 831-845.
-
(2006)
Theor Appl Genet
, vol.113
, pp. 831-845
-
-
Guo, M.1
Rupe, M.A.2
Yang, X.3
Crasta, O.4
Zinselmeier, C.5
-
17
-
-
84876255919
-
Identification of transcriptome SNPs for assessing allele-specific gene expression in a super-hybrid rice Xieyou9308
-
Zhai R, Feng Y, Zhan X, Shen X, Wu W, et al. (2013) Identification of transcriptome SNPs for assessing allele-specific gene expression in a super-hybrid rice Xieyou9308. PLOS ONE 8: e60668.
-
(2013)
PLOS ONE
, vol.8
, pp. e60668
-
-
Zhai, R.1
Feng, Y.2
Zhan, X.3
Shen, X.4
Wu, W.5
-
18
-
-
84883464223
-
A computational workflow to identify allele-specific expression and epigenetic modification in maize
-
Wei X, Wang X (2013) A computational workflow to identify allele-specific expression and epigenetic modification in maize. Genomics Proteomics Bioinformatics 11: 247-252.
-
(2013)
Genomics Proteomics Bioinformatics
, vol.11
, pp. 247-252
-
-
Wei, X.1
Wang, X.2
-
19
-
-
84864453922
-
Identification of allele-specific alternative mRNA processing via transcriptome sequencing
-
Li G, Bahn JH, Lee JH, Peng G, Chen Z, et al. (2012) Identification of allele-specific alternative mRNA processing via transcriptome sequencing. Nucleic Acids Res 40: e104.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. e104
-
-
Li, G.1
Bahn, J.H.2
Lee, J.H.3
Peng, G.4
Chen, Z.5
-
20
-
-
84879419235
-
Allelic imbalance metre (Allim), a new tool for measuring allele-specific gene expression with RNA-seq data
-
Pandey RV, Franssen SU, Futschik A, Schlotterer C (2013) Allelic imbalance metre (Allim), a new tool for measuring allele-specific gene expression with RNA-seq data. Mol Ecol Resour 13: 740-745.
-
(2013)
Mol Ecol Resour
, vol.13
, pp. 740-745
-
-
Pandey, R.V.1
Franssen, S.U.2
Futschik, A.3
Schlotterer, C.4
-
22
-
-
77951902699
-
Key considerations for measuring allelic expression on a genomic scale using high-throughput sequencing
-
Fontanillas P, Landry CR, Wittkopp PJ, Russ C, Gruber JD, et al. (2010) Key considerations for measuring allelic expression on a genomic scale using high-throughput sequencing. Mol Ecol 19 Suppl 1: 212-227.
-
(2010)
Mol Ecol
, vol.19
, pp. 212-227
-
-
Fontanillas, P.1
Landry, C.R.2
Wittkopp, P.J.3
Russ, C.4
Gruber, J.D.5
-
23
-
-
80053522581
-
A powerful and flexible statistical framework for testing hypotheses of allele-specific gene expression from RNA-seq data
-
Skelly DA, Johansson M, Madeoy J, Wakefield J, Akey JM (2011) A powerful and flexible statistical framework for testing hypotheses of allele-specific gene expression from RNA-seq data. Genome Res 21: 1728-1737.
-
(2011)
Genome Res
, vol.21
, pp. 1728-1737
-
-
Skelly, D.A.1
Johansson, M.2
Madeoy, J.3
Wakefield, J.4
Akey, J.M.5
-
24
-
-
84861365328
-
Allelic imbalance in Drosophila hybrid heads: Exons, isoforms, and evolution
-
Graze RM, Novelo LL, Amin V, Fear JM, Casella G, et al. (2012) Allelic imbalance in Drosophila hybrid heads: exons, isoforms, and evolution. Mol Biol Evol 29: 1521-1532.
-
(2012)
Mol Biol Evol
, vol.29
, pp. 1521-1532
-
-
Graze, R.M.1
Novelo, L.L.2
Amin, V.3
Fear, J.M.4
Casella, G.5
-
25
-
-
84859885816
-
Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
-
Trapnell C, Roberts A, Goff L, Pertea G, Kim D, et al. (2012) Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks. Nat Protoc 7: 562-578.
-
(2012)
Nat Protoc
, vol.7
, pp. 562-578
-
-
Trapnell, C.1
Roberts, A.2
Goff, L.3
Pertea, G.4
Kim, D.5
-
26
-
-
84871946825
-
Streaming fragment assignment for real-time analysis of sequencing experiments
-
Roberts A, Pachter L (2013) Streaming fragment assignment for real-time analysis of sequencing experiments. Nat Methods 10: 71-73.
-
(2013)
Nat Methods
, vol.10
, pp. 71-73
-
-
Roberts, A.1
Pachter, L.2
-
27
-
-
79551529430
-
A unifying theory for general multigenic heterosis: Energy efficiency, protein metabolism, and implications for molecular breeding
-
Goff SA (2011) A unifying theory for general multigenic heterosis: energy efficiency, protein metabolism, and implications for molecular breeding. New Phytol 189: 923-937.
-
(2011)
New Phytol
, vol.189
, pp. 923-937
-
-
Goff, S.A.1
-
28
-
-
84859210032
-
Fast gapped-read alignment with Bowtie 2
-
Langmead B, Salzberg SL (2012) Fast gapped-read alignment with Bowtie 2. Nat Methods 9: 357-359.
-
(2012)
Nat Methods
, vol.9
, pp. 357-359
-
-
Langmead, B.1
Salzberg, S.L.2
-
29
-
-
65449136284
-
TopHat: Discovering splice junctions with RNA-Seq
-
Trapnell C, Pachter L, Salzberg SL (2009) TopHat: discovering splice junctions with RNA-Seq. Bioinformatics 25: 1105-1111.
-
(2009)
Bioinformatics
, vol.25
, pp. 1105-1111
-
-
Trapnell, C.1
Pachter, L.2
Salzberg, S.L.3
-
32
-
-
84905049901
-
Trimmomatic: A flexible trimmer for Illumina sequence data
-
Bolger AM, Lohse M, Usadel B (2014) Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics 30: 2114-2120. doi: 10.1093/bioinformatics/btu170.
-
(2014)
Bioinformatics
, vol.30
, pp. 2114-2120
-
-
Bolger, A.M.1
Lohse, M.2
Usadel, B.3
-
33
-
-
77951770756
-
BEDTools: A flexible suite of utilities for comparing genomic features
-
Quinlan AR, Hall IM (2010) BEDTools: a flexible suite of utilities for comparing genomic features. Bioinformatics 26: 841-842.
-
(2010)
Bioinformatics
, vol.26
, pp. 841-842
-
-
Quinlan, A.R.1
Hall, I.M.2
-
34
-
-
84871809302
-
STAR: Ultrafast universal RNA-seq aligner
-
Dobin A, Davis CA, Schlesinger F, Drenkow J, Zaleski C, et al. (2013) STAR: ultrafast universal RNA-seq aligner. Bioinformatics 29: 15-21.
-
(2013)
Bioinformatics
, vol.29
, pp. 15-21
-
-
Dobin, A.1
Davis, C.A.2
Schlesinger, F.3
Drenkow, J.4
Zaleski, C.5
-
35
-
-
84862506964
-
A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3
-
Cingolani P, Platts A, Wang le L, Coon M, Nguyen T, et al. (2012) A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3. Fly (Austin) 6: 80-92.
-
(2012)
Fly (Austin)
, vol.6
, pp. 80-92
-
-
Cingolani, P.1
Platts, A.2
Wang Le, L.3
Coon, M.4
Nguyen, T.5
-
36
-
-
77955405475
-
Deriving the consequences of genomic variants with the Ensembl API and SNP Effect Predictor
-
McLaren W, Pritchard B, Rios D, Chen Y, Flicek P, et al. (2010) Deriving the consequences of genomic variants with the Ensembl API and SNP Effect Predictor. Bioinformatics 26: 2069-2070.
-
(2010)
Bioinformatics
, vol.26
, pp. 2069-2070
-
-
McLaren, W.1
Pritchard, B.2
Rios, D.3
Chen, Y.4
Flicek, P.5
-
37
-
-
0043122919
-
SIFT: Predicting amino acid changes that affect protein function
-
Ng PC, Henikoff S (2003) SIFT: Predicting amino acid changes that affect protein function. Nucleic Acids Res 31: 3812-3814.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 3812-3814
-
-
Ng, P.C.1
Henikoff, S.2
-
38
-
-
61649083057
-
BioMart - biological queries made easy
-
Smedley D, Haider S, Ballester B, Holland R, London D, et al. (2009) BioMart - biological queries made easy. BMC Genomics 10: 22.
-
(2009)
BMC Genomics
, vol.10
, pp. 22
-
-
Smedley, D.1
Haider, S.2
Ballester, B.3
Holland, R.4
London, D.5
-
39
-
-
75249087100
-
edgeR: A Bioconductor package for differential expression analysis of digital gene expression data
-
Robinson MD, McCarthy DJ, Smyth GK (2010) edgeR: a Bioconductor package for differential expression analysis of digital gene expression data. Bioinformatics 26: 139-140.
-
(2010)
Bioinformatics
, vol.26
, pp. 139-140
-
-
Robinson, M.D.1
McCarthy, D.J.2
Smyth, G.K.3
-
40
-
-
75249095274
-
DEGseq: An R package for identifying differentially expressed genes from RNA-seq data
-
Wang L, Feng Z, Wang X, Zhang X (2010) DEGseq: an R package for identifying differentially expressed genes from RNA-seq data. Bioinformatics 26: 136-138.
-
(2010)
Bioinformatics
, vol.26
, pp. 136-138
-
-
Wang, L.1
Feng, Z.2
Wang, X.3
Zhang, X.4
-
41
-
-
77958471357
-
Differential expression analysis for sequence count data
-
Anders S, Huber W (2010) Differential expression analysis for sequence count data. Genome Biol 11: R106.
-
(2010)
Genome Biol
, vol.11
, pp. R106
-
-
Anders, S.1
Huber, W.2
-
43
-
-
84891783174
-
Activities at the Universal Protein Resource (UniProt)
-
UniProt Consortium (2014) Activities at the Universal Protein Resource (UniProt). Nucleic Acids Res 42: D191-198.
-
(2014)
Nucleic Acids Res
, vol.42
, pp. D191-D198
-
-
-
44
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, et al. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25: 3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
-
45
-
-
84919883689
-
-
Available: Accessed 4 Sept 2014
-
GO slims and Subset Guide. Available: http://www.geneontology.org/page/go-slim-and-subset-guide. Accessed 4 Sept 2014.
-
GO Slims and Subset Guide
-
-
-
46
-
-
84919938491
-
-
Available: Accessed 3 Aug 2013
-
Mouse genome sequence (GRCm38). Available: http://www.ensembl.org/Mus-musculus/Info/Index. Accessed 3 Aug 2013.
-
Mouse Genome Sequence (GRCm38)
-
-
-
47
-
-
84858735651
-
The fine-scale architecture of structural variants in 17 mouse genomes
-
Yalcin B, Wong K, Bhomra A, Goodson M, Keane TM, et al. (2012) The fine-scale architecture of structural variants in 17 mouse genomes. Genome Biol 13: R18.
-
(2012)
Genome Biol
, vol.13
, pp. R18
-
-
Yalcin, B.1
Wong, K.2
Bhomra, A.3
Goodson, M.4
Keane, T.M.5
-
48
-
-
84891714125
-
RNA-seq analysis of allele-specific expression, hybrid effects, and regulatory divergence in hybrids compared with their parents from natural populations
-
Bell GD, Kane NC, Rieseberg LH, Adams KL (2013) RNA-seq analysis of allele-specific expression, hybrid effects, and regulatory divergence in hybrids compared with their parents from natural populations. Genome Biol Evol 5: 1309-1323.
-
(2013)
Genome Biol Evol
, vol.5
, pp. 1309-1323
-
-
Bell, G.D.1
Kane, N.C.2
Rieseberg, L.H.3
Adams, K.L.4
-
49
-
-
84873041122
-
Comparison and contrast of genes and biological pathways responding to Marek's disease virus infection using allele-specific expression and differential expression in broiler and layer chickens
-
Perumbakkam S, Muir WM, Black-Pyrkosz A, Okimoto R, Cheng HH (2013) Comparison and contrast of genes and biological pathways responding to Marek's disease virus infection using allele-specific expression and differential expression in broiler and layer chickens. BMC Genomics 14: 64.
-
(2013)
BMC Genomics
, vol.14
, pp. 64
-
-
Perumbakkam, S.1
Muir, W.M.2
Black-Pyrkosz, A.3
Okimoto, R.4
Cheng, H.H.5
-
50
-
-
78650304100
-
Synonymous but not the same: The causes and consequences of codon bias
-
Plotkin JB, Kudla G (2011) Synonymous but not the same: the causes and consequences of codon bias. Nat Rev Genet 12: 32-42.
-
(2011)
Nat Rev Genet
, vol.12
, pp. 32-42
-
-
Plotkin, J.B.1
Kudla, G.2
-
51
-
-
84876348105
-
Sounds of silence: Synonymous nucleotides as a key to biological regulation and complexity
-
Shabalina SA, Spiridonov NA, Kashina A (2013) Sounds of silence: synonymous nucleotides as a key to biological regulation and complexity. Nucleic Acids Res 41: 2073-2094.
-
(2013)
Nucleic Acids Res
, vol.41
, pp. 2073-2094
-
-
Shabalina, S.A.1
Spiridonov, N.A.2
Kashina, A.3
-
52
-
-
17244367767
-
Bioinformatics approaches and resources for single nucleotide polymorphism functional analysis
-
Mooney S (2005) Bioinformatics approaches and resources for single nucleotide polymorphism functional analysis. Brief Bioinform 6: 44-56.
-
(2005)
Brief Bioinform
, vol.6
, pp. 44-56
-
-
Mooney, S.1
-
53
-
-
79952422304
-
Quality control and preprocessing of metagenomic datasets
-
Schmieder R, Edwards R (2011) Quality control and preprocessing of metagenomic datasets. Bioinformatics 27: 863-864.
-
(2011)
Bioinformatics
, vol.27
, pp. 863-864
-
-
Schmieder, R.1
Edwards, R.2
-
55
-
-
84897133117
-
MOSAIK: A hash-based algorithm for accurate next-generation sequencing short-read mapping
-
Lee WP, Stromberg MP, Ward A, Stewart C, Garrison EP, et al. (2014) MOSAIK: a hash-based algorithm for accurate next-generation sequencing short-read mapping. PLOS ONE 9: e90581.
-
(2014)
PLOS ONE
, vol.9
, pp. e90581
-
-
Lee, W.P.1
Stromberg, M.P.2
Ward, A.3
Stewart, C.4
Garrison, E.P.5
-
56
-
-
79961123152
-
RSEM: Accurate transcript quantification from RNA-Seq data with or without a reference genome
-
Li B, Dewey CN (2011) RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome. BMC Bioinformatics 12: 323.
-
(2011)
BMC Bioinformatics
, vol.12
, pp. 323
-
-
Li, B.1
Dewey, C.N.2
-
59
-
-
84862234802
-
The Arabidopsis Information Resource (TAIR): Improved gene annotation and new tools
-
Lamesch P, Berardini TZ, Li D, Swarbreck D, Wilks C, et al. (2012) The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools. Nucleic Acids Res 40: D1202-1210.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. D1202-D1210
-
-
Lamesch, P.1
Berardini, T.Z.2
Li, D.3
Swarbreck, D.4
Wilks, C.5
-
60
-
-
58349111875
-
AmiGO: Online access to ontology and annotation data
-
Carbon S, Ireland A, Mungall CJ, Shu S, Marshall B, et al. (2009) AmiGO: online access to ontology and annotation data. Bioinformatics 25: 288-289.
-
(2009)
Bioinformatics
, vol.25
, pp. 288-289
-
-
Carbon, S.1
Ireland, A.2
Mungall, C.J.3
Shu, S.4
Marshall, B.5
-
61
-
-
77956534324
-
ANNOVAR: Functional annotation of genetic variants from high-throughput sequencing data
-
Wang K, Li M, Hakonarson H (2010) ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data. Nucleic Acids Res 38: e164.
-
(2010)
Nucleic Acids Res
, vol.38
, pp. e164
-
-
Wang, K.1
Li, M.2
Hakonarson, H.3
-
62
-
-
61449172037
-
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
-
Huang da W, Sherman BT, Lempicki RA (2009) Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat Protoc 4: 44-57.
-
(2009)
Nat Protoc
, vol.4
, pp. 44-57
-
-
Huang Da, W.1
Sherman, B.T.2
Lempicki, R.A.3
-
63
-
-
33747846582
-
WEGO: A web tool for plotting GO annotations
-
Ye J, Fang L, Zheng H, Zhang Y, Chen J, et al. (2006) WEGO: a web tool for plotting GO annotations. Nucleic Acids Res 34: W293-297.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. W293-W297
-
-
Ye, J.1
Fang, L.2
Zheng, H.3
Zhang, Y.4
Chen, J.5
|