-
1
-
-
0242365676
-
Genome-scale approaches to resolving incongruence in molecular phylogenies
-
pmid: 14574403
-
A. Rokas, B. L. Williams, N. King, S. B. Carroll, Genome-scale approaches to resolving incongruence in molecular phylogenies. Nature 425, 798-804 (2003). doi: 10.1038/nature02053; pmid: 14574403
-
(2003)
Nature
, vol.425
, pp. 798-804
-
-
Rokas, A.1
Williams, B.L.2
King, N.3
Carroll, S.B.4
-
2
-
-
0031504952
-
Gene trees in species trees
-
W. P. Maddison, Gene trees in species trees. Syst. Biol. 46, 523-536 (1997). doi: 10.1093/sysbio/46.3.523
-
(1997)
Syst. Biol.
, vol.46
, pp. 523-536
-
-
Maddison, W.P.1
-
3
-
-
58249100073
-
Is a new and general theory of molecular systematics emerging?
-
pmid: 19146594
-
S. V. Edwards, Is a new and general theory of molecular systematics emerging? Evolution 63, 1-19 (2009). doi: 10.1111/j.1558-5646.2008.00549.x; pmid: 19146594
-
(2009)
Evolution
, vol.63
, pp. 1-19
-
-
Edwards, S.V.1
-
4
-
-
70450233546
-
Estimating species trees: Methods of phylogenetic analysis when there is incongruence across genes
-
pmid: 20525600
-
L. L. Knowles, Estimating species trees: Methods of phylogenetic analysis when there is incongruence across genes. Syst. Biol. 58, 463-467 (2009). doi: 10.1093/sysbio/syp061; pmid: 20525600
-
(2009)
Syst. Biol.
, vol.58
, pp. 463-467
-
-
Knowles, L.L.1
-
5
-
-
46449135061
-
A phylogenomic study of birds reveals their evolutionary history
-
pmid: 18583609
-
S. J. Hackett et al., A phylogenomic study of birds reveals their evolutionary history. Science 320, 1763-1768 (2008). doi: 10.1126/science.1157704; pmid: 18583609
-
(2008)
Science
, vol.320
, pp. 1763-1768
-
-
Hackett, S.J.1
-
6
-
-
84866289853
-
Resolving conflict in eutherian mammal phylogeny using phylogenomics and the multispecies coalescent model
-
pmid: 22930817
-
S. Song, L. Liu, S. V. Edwards, S. Wu, Resolving conflict in eutherian mammal phylogeny using phylogenomics and the multispecies coalescent model. Proc. Natl. Acad. Sci. U.S.A. 109, 14942-14947 (2012). doi: 10.1073/pnas.1211733109; pmid: 22930817
-
(2012)
Proc. Natl. Acad. Sci. U.S.A.
, vol.109
, pp. 14942-14947
-
-
Song, S.1
Liu, L.2
Edwards, S.V.3
Wu, S.4
-
7
-
-
80055070300
-
Impacts of the Cretaceous Terrestrial Revolution and KPg extinction on mammal diversification
-
pmid: 21940861
-
R. W. Meredith et al., Impacts of the Cretaceous Terrestrial Revolution and KPg extinction on mammal diversification. Science 334, 521-524 (2011). doi: 10.1126/science.1211028; pmid: 21940861
-
(2011)
Science
, vol.334
, pp. 521-524
-
-
Meredith, R.W.1
-
8
-
-
65649131928
-
Gene tree discordance, phylogenetic inference and the multispecies coalescent
-
pmid: 19307040
-
J. H. Degnan, N. A. Rosenberg, Gene tree discordance, phylogenetic inference and the multispecies coalescent. Trends Ecol. Evol. 24, 332-340 (2009). doi: 10.1016/j.tree.2009.01.009; pmid: 19307040
-
(2009)
Trends Ecol. Evol.
, vol.24
, pp. 332-340
-
-
Degnan, J.H.1
Rosenberg, N.A.2
-
9
-
-
84890335523
-
Discordance of species trees with their most likely gene trees: A unifying principle
-
pmid: 24030555
-
N. A. Rosenberg, Discordance of species trees with their most likely gene trees: A unifying principle. Mol. Biol. Evol. 30, 2709-2713 (2013). doi: 10.1093/molbev/mst160; pmid: 24030555
-
(2013)
Mol. Biol. Evol.
, vol.30
, pp. 2709-2713
-
-
Rosenberg, N.A.1
-
10
-
-
34347256397
-
High-resolution species trees without concatenation
-
pmid: 17392434
-
S. V. Edwards, L. Liu, D. K. Pearl, High-resolution species trees without concatenation. Proc. Natl. Acad. Sci. U.S.A. 104, 5936-5941 (2007). doi: 10.1073/pnas.0607004104; pmid: 17392434
-
(2007)
Proc. Natl. Acad. Sci. U.S.A.
, vol.104
, pp. 5936-5941
-
-
Edwards, S.V.1
Liu, L.2
Pearl, D.K.3
-
11
-
-
33847302458
-
Inconsistency of phylogenetic estimates from concatenated data under coalescence
-
pmid: 17366134
-
L. S. Kubatko, J. H. Degnan, Inconsistency of phylogenetic estimates from concatenated data under coalescence. Syst. Biol. 56, 17-24 (2007). doi: 10.1080/10635150601146041; pmid: 17366134
-
(2007)
Syst. Biol.
, vol.56
, pp. 17-24
-
-
Kubatko, L.S.1
Degnan, J.H.2
-
12
-
-
78149256307
-
BUCKy: Gene tree/species tree reconciliation with Bayesian concordance analysis
-
pmid: 20861028
-
B. R. Larget, S. K. Kotha, C. N. Dewey, C. Ané, BUCKy: Gene tree/species tree reconciliation with Bayesian concordance analysis. Bioinformatics 26, 2910-2911 (2010). doi: 10.1093/bioinformatics/btq539; pmid: 20861028
-
(2010)
Bioinformatics
, vol.26
, pp. 2910-2911
-
-
Larget, B.R.1
Kotha, S.K.2
Dewey, C.N.3
Ané, C.4
-
13
-
-
77957686501
-
A maximum pseudo-likelihood approach for estimating species trees under the coalescent model
-
pmid: 20937096
-
L. Liu, L. Yu, S. V. Edwards, A maximum pseudo-likelihood approach for estimating species trees under the coalescent model. BMC Evol. Biol. 10, 302 (2010). doi: 10.1186/1471-2148-10-302; pmid: 20937096
-
(2010)
BMC Evol. Biol.
, vol.10
, pp. 302
-
-
Liu, L.1
Yu, L.2
Edwards, S.V.3
-
14
-
-
34548575126
-
Species trees from gene trees: Reconstructing Bayesian posterior distributions of a species phylogeny using estimated gene tree distributions
-
pmid: 17562474
-
L. Liu, D. K. Pearl, Species trees from gene trees: Reconstructing Bayesian posterior distributions of a species phylogeny using estimated gene tree distributions. Syst. Biol. 56, 504-514 (2007). doi: 10.1080/10635150701429982; pmid: 17562474
-
(2007)
Syst. Biol.
, vol.56
, pp. 504-514
-
-
Liu, L.1
Pearl, D.K.2
-
15
-
-
54949090066
-
BEST: Bayesian estimation of species trees under the coalescent model
-
pmid: 18799483
-
L. Liu, BEST: Bayesian estimation of species trees under the coalescent model. Bioinformatics 24, 2542-2543 (2008). doi: 10.1093/bioinformatics/btn484; pmid: 18799483
-
(2008)
Bioinformatics
, vol.24
, pp. 2542-2543
-
-
Liu, L.1
-
16
-
-
70349425459
-
Estimating species phylogenies using coalescence times among sequences
-
pmid: 20525601
-
L. Liu, L. Yu, D. K. Pearl, S. V. Edwards, Estimating species phylogenies using coalescence times among sequences. Syst. Biol. 58, 468-477 (2009). doi: 10.1093/sysbio/syp031; pmid: 20525601
-
(2009)
Syst. Biol.
, vol.58
, pp. 468-477
-
-
Liu, L.1
Yu, L.2
Pearl, D.K.3
Edwards, S.V.4
-
17
-
-
76849102326
-
Incomplete lineage sorting: Consistent phylogeny estimation from multiple loci
-
pmid: 20150678
-
E. Mossel, S. Roch, Incomplete lineage sorting: Consistent phylogeny estimation from multiple loci. IEEE/ACM Trans. Comp. Biol. Bioinform. 7, 166-171 (2010). doi: 10.1109/TCBB.2008.66; pmid: 20150678
-
(2010)
IEEE/ACM Trans. Comp. Biol. Bioinform.
, vol.7
, pp. 166-171
-
-
Mossel, E.1
Roch, S.2
-
18
-
-
77249086587
-
Bayesian inference of species trees from multilocus data
-
pmid: 19906793
-
J. Heled, A. J. Drummond, Bayesian inference of species trees from multilocus data. Mol. Biol. Evol. 27, 570-580 (2010). doi: 10.1093/molbev/msp274; pmid: 19906793
-
(2010)
Mol. Biol. Evol.
, vol.27
, pp. 570-580
-
-
Heled, J.1
Drummond, A.J.2
-
19
-
-
80955136714
-
Algorithms for MDC-based multi-locus phylogeny inference: Beyond rooted binary gene trees on single alleles
-
pmid: 22035329
-
Y. Yu, T. Warnow, L. Nakhleh, Algorithms for MDC-based multi-locus phylogeny inference: Beyond rooted binary gene trees on single alleles. J. Comput. Biol. 18, 1543-1559 (2011). doi: 10.1089/cmb.2011.0174; pmid: 22035329
-
(2011)
J. Comput. Biol.
, vol.18
, pp. 1543-1559
-
-
Yu, Y.1
Warnow, T.2
Nakhleh, L.3
-
20
-
-
0041817551
-
Bayes estimation of species divergence times and ancestral population sizes using DNA sequences from multiple loci
-
pmid: 12930768
-
B. Rannala, Z. Yang, Bayes estimation of species divergence times and ancestral population sizes using DNA sequences from multiple loci. Genetics 164, 1645-1656 (2003). pmid: 12930768
-
(2003)
Genetics
, vol.164
, pp. 1645-1656
-
-
Rannala, B.1
Yang, Z.2
-
21
-
-
84864697376
-
Infe ng species trees directly from biallelic genetic markers: Bypa ing gene trees in a full coalescent analysis
-
pmid 22422763
-
D. Bryant, R. Bouckae J. Felsenstein, N. A. Rosenberg, A. RoyChoudhury, Infe ng species trees directly from biallelic genetic markers: Bypa ing gene trees in a full coalescent analysis. Mol. Biol. Evo 29, 1917-1932 (2012). doi: 10.1093/molbev/mss086; pmid 22422763
-
(2012)
Mol. Biol. Evo
, vol.29
, pp. 1917-1932
-
-
Bryant, D.1
Bouckae J Felsenstein, R.2
Rosenberg, N.A.3
Roychoudhury, A.4
-
22
-
-
84888597013
-
Linking great apes genome evolution acr s time scales using polymorphism-aware phylogenetic m els
-
pmid: 23906727
-
N. De Maio, C. Schlött er, C. Kosiol, Linking great apes genome evolution acr s time scales using polymorphism-aware phylogenetic m els. Mol. Biol. Evol. 30, 2249-2262 (2013). doi: 10.1093/m lbev/mst131; pmid: 23906727
-
(2013)
Mol. Biol. Evol.
, vol.30
, pp. 2249-2262
-
-
De Maio, N.1
Schlötter, C.2
Kosiol, C.3
-
23
-
-
84917697072
-
Quartet inference from SNP data under the coalescent model
-
J. Chifman, L. Kubatk Quartet inference from SNP data under the coalescent model. Bioinformatics (2014). doi: 10.1093/bioinformatics/btu530
-
(2014)
Bioinformatics
-
-
Chifman, J.1
Kubatk, L.2
-
24
-
-
84891531569
-
Target capture and massively parallel sequencing of ultraconserved elements for comparative studies at shallow evolutionary time scales
-
pmid: 24021724
-
B. T. Smith, M. G. Harvey, B. C. Faircloth, T. C. Glenn, R. T. Brumfield, Target capture and massively parallel sequencing of ultraconserved elements for comparative studies at shallow evolutionary time scales. Syst. Biol. 63, 83-95 (2014). doi: 10.1093/sysbio/syt061; pmid: 24021724
-
(2014)
Syst. Biol.
, vol.63
, pp. 83-95
-
-
Smith, B.T.1
Harvey, M.G.2
Faircloth, B.C.3
Glenn, T.C.4
Brumfield, R.T.5
-
25
-
-
84884592480
-
Identifying localized biases in large datasets: A case study using the avian tree of life
-
pmid: 23791948
-
R. T. Kimball, N. Wang, V. Heimer-McGinn, C. Ferguson, E. L. Braun, Identifying localized biases in large datasets: A case study using the avian tree of life. Mol. Phylogenet. Evol. 69, 1021-1032 (2013). doi: 10.1016/j.ympev.2013.05.029; pmid: 23791948
-
(2013)
Mol. Phylogenet. Evol.
, vol.69
, pp. 1021-1032
-
-
Kimball, R.T.1
Wang, N.2
Heimer-Mcginn, V.3
Ferguson, C.4
Braun, E.L.5
-
26
-
-
84873860010
-
A phylogeny of birds based on over 1, 500 loci collected by target enrichment and high-throughput sequencing
-
pmid: 23382987
-
J. E. McCormack et al., A phylogeny of birds based on over 1, 500 loci collected by target enrichment and high-throughput sequencing. PLOS ONE 8, e54848 (2013). doi: 10.1371/journal.pone.0054848; pmid: 23382987
-
(2013)
PLOS ONE
, vol.8
, pp. e54848
-
-
McCormack, J.E.1
-
27
-
-
77249139678
-
Fast and consistent estimation of species trees using supermatrix rooted triples
-
pmid: 19833741
-
M. DeGiorgio, J. H. Degnan, Fast and consistent estimation of species trees using supermatrix rooted triples. Mol. Biol. Evol. 27, 552-569 (2010). doi: 10.1093/molbev/msp250; pmid: 19833741
-
(2010)
Mol. Biol. Evol.
, vol.27
, pp. 552-569
-
-
Degiorgio, M.1
Degnan, J.H.2
-
28
-
-
84883482283
-
Naive binning improves phylogenomic analyses
-
pmid: 23842808
-
M. S. Bayzid, T. Warnow, Naive binning improves phylogenomic analyses. Bioinformatics 29, 2277-2284 (2013). doi: 10.1093/bioinformatics/btt394; pmid: 23842808
-
(2013)
Bioinformatics
, vol.29
, pp. 2277-2284
-
-
Bayzid, M.S.1
Warnow, T.2
-
29
-
-
84893812106
-
Error in phylogenetic estimation for bushes in the Tree of Life
-
S. Patel, R. Kimball, E. Braun, Error in phylogenetic estimation for bushes in the Tree of Life. J. Phylogenet. Evol. Biol. 1, 2 (2013). doi: 10.4172/2329-9002.1000110
-
(2013)
J. Phylogenet. Evol. Biol.
, vol.1
, pp. 2
-
-
Patel, S.1
Kimball, R.2
Braun, E.3
-
30
-
-
0035229987
-
Designing fast converging phylogenetic methods
-
pmid: 11473009
-
L. Nakhleh, U. Roshan, K. St. John, J. Sun, T. Warnow, Designing fast converging phylogenetic methods. Bioinformatics 17 (suppl. 1), S190-S198 (2001). doi: 10.1093/bioinformatics/17.suppl-1.S190; pmid: 11473009
-
(2001)
Bioinformatics
, vol.17
, pp. S190-S198
-
-
Nakhleh, L.1
Roshan, U.2
St. John, K.3
Sun, J.4
Warnow, T.5
-
31
-
-
84917708482
-
Whole-genome analyses resolve early branches in the tree of life of modern birds
-
E. D. Jarvis et al., Whole-genome analyses resolve early branches in the tree of life of modern birds. Science 346, 1320-1331 (2014).
-
(2014)
Science
, vol.346
, pp. 1320-1331
-
-
Jarvis, E.D.1
-
32
-
-
84878113118
-
Inferring ancient divergences requires genes with strong phylogenetic signals
-
pmid: 23657258
-
L. Salichos, A. Rokas, Inferring ancient divergences requires genes with strong phylogenetic signals. Nature 497, 327-331 (2013). doi: 10.1038/nature12130; pmid: 23657258
-
(2013)
Nature
, vol.497
, pp. 327-331
-
-
Salichos, L.1
Rokas, A.2
-
33
-
-
33750403801
-
RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
-
pmid: 16928733
-
A. Stamatakis, RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22, 2688-2690 (2006). doi: 10.1093/bioinformatics/btl446; pmid: 16928733
-
(2006)
Bioinformatics
, vol.22
, pp. 2688-2690
-
-
Stamatakis, A.1
-
34
-
-
0026822436
-
Phylogenetic inference based on matrix representation of trees
-
pmid: 1342924
-
M. A. Ragan, Phylogenetic inference based on matrix representation of trees. Mol. Phylogenet. Evol. 1, 53-58 (1992). doi: 10.1016/1055-7903(92)90035-F; pmid: 1342924
-
(1992)
Mol. Phylogenet. Evol.
, vol.1
, pp. 53-58
-
-
Ragan, M.A.1
-
35
-
-
50949129519
-
Calculating bootstrap probabilities of phylogeny using multilocus sequence data
-
pmid: 18281270
-
T.-K. Seo, Calculating bootstrap probabilities of phylogeny using multilocus sequence data. Mol. Biol. Evol. 25, 960-971 (2008). doi: 10.1093/molbev/msn043; pmid: 18281270
-
(2008)
Mol. Biol. Evol.
, vol.25
, pp. 960-971
-
-
Seo, T.-K.1
-
36
-
-
84887319003
-
The influence of gene flow on species tree estimation: A simulation study
-
pmid: 23939193
-
A. D. Leaché, R. B. Harris, B. Rannala, Z. Yang, The influence of gene flow on species tree estimation: A simulation study. Syst. Biol. 63, 17-30 (2013). doi: 10.1093/sysbio/syt049; pmid: 23939193
-
(2013)
Syst. Biol.
, vol.63
, pp. 17-30
-
-
Leaché, A.D.1
Harris, R.B.2
Rannala, B.3
Yang, Z.4
-
37
-
-
84878443264
-
Phylogenomic analyses of nuclear genes reveal the evolutionary relationships within the BEP clade and the evidence of positive selection in Poaceae
-
pmid: 23734211
-
L. Zhao et al., Phylogenomic analyses of nuclear genes reveal the evolutionary relationships within the BEP clade and the evidence of positive selection in Poaceae. PLOS ONE 8, e64642 (2013). doi: 10.1371/journal.pone.0064642; pmid: 23734211
-
(2013)
PLOS ONE
, vol.8
, pp. e64642
-
-
Zhao, L.1
-
38
-
-
84883284590
-
Origin of land plants using the multispecies coalescent model
-
pmid: 23707196
-
B. Zhong, L. Liu, Z. Yan, D. Penny, Origin of land plants using the multispecies coalescent model. Trends Plant Sci. 18, 492-495 (2013). doi: 10.1016/j.tplants.2013.04.009;pmid: 23707196
-
(2013)
Trends Plant Sci.
, vol.18
, pp. 492-495
-
-
Zhong, B.1
Liu, L.2
Yan, Z.3
Penny, D.4
-
39
-
-
67449167484
-
Properties of consensus methods for inferring species trees from gene trees
-
pmid: 20525567
-
J. H. Degnan, M. DeGiorgio, D. Bryant, N. A. Rosenberg, Properties of consensus methods for inferring species trees from gene trees. Syst. Biol. 58, 35-54 (2009). doi: 10.1093/sysbio/syp008; pmid: 20525567
-
(2009)
Syst. Biol.
, vol.58
, pp. 35-54
-
-
Degnan, J.H.1
Degiorgio, M.2
Bryant, D.3
Rosenberg, N.A.4
-
40
-
-
80052392767
-
Mesozoic retroposons reveal parrots as the closest living relatives of passerine birds
-
pmid: 21863010
-
A. Suh et al., Mesozoic retroposons reveal parrots as the closest living relatives of passerine birds. Nat. Commun. 2, 443 (2011). doi: 10.1038/ncomms1448; pmid: 21863010
-
(2011)
Nat. Commun.
, vol.2
, pp. 443
-
-
Suh, A.1
-
41
-
-
84855873417
-
Testing hypotheses about the sister group of the passeriformes using an independent 30-locus data set
-
pmid: 21940640
-
N. Wang, E. L. Braun, R. T. Kimball, Testing hypotheses about the sister group of the passeriformes using an independent 30-locus data set. Mol. Biol. Evol. 29, 737-750 (2012). doi: 10.1093/molbev/msr230; pmid: 21940640
-
(2012)
Mol. Biol. Evol.
, vol.29
, pp. 737-750
-
-
Wang, N.1
Braun, E.L.2
Kimball, R.T.3
-
43
-
-
33644536713
-
Tunicates and not cephalochordates are the closest living relatives of vertebrates
-
pmid: 16495997
-
F. Delsuc, H. Brinkmann, D. Chourrout, H. Philippe, Tunicates and not cephalochordates are the closest living relatives of vertebrates. Nature 439, 965-968 (2006). doi: 10.1038/nature04336; pmid: 16495997
-
(2006)
Nature
, vol.439
, pp. 965-968
-
-
Delsuc, F.1
Brinkmann, H.2
Chourrout, D.3
Philippe, H.4
-
44
-
-
33750585486
-
Deuterostome phylogeny reveals monophyletic chordates and the new phylum Xenoturbellida
-
pmid: 17051155
-
S. J. Bourlat et al., Deuterostome phylogeny reveals monophyletic chordates and the new phylum Xenoturbellida. Nature 444, 85-88 (2006). doi: 10.1038/nature05241; pmid: 17051155
-
(2006)
Nature
, vol.444
, pp. 85-88
-
-
Bourlat, S.J.1
-
45
-
-
71549149673
-
Tunicate mitogenomics and phylogenetics: Peculiarities of the Herdmania momus mitochondrial genome and support for the new chordate phylogeny
-
pmid: 19922605
-
T. R. Singh et al., Tunicate mitogenomics and phylogenetics: Peculiarities of the Herdmania momus mitochondrial genome and support for the new chordate phylogeny. BMC Genomics 10, 534 (2009). doi: 10.1186/1471-2164-10-534; pmid: 19922605
-
(2009)
BMC Genomics
, vol.10
, pp. 534
-
-
Singh, T.R.1
-
46
-
-
38449121762
-
Molecular and genomic data identify the closest living relative of primates
-
pmid: 17975064
-
J. E. Janecka et al., Molecular and genomic data identify the closest living relative of primates. Science 318, 792-794 (2007). doi: 10.1126/science.1147555; pmid: 17975064
-
(2007)
Science
, vol.318
, pp. 792-794
-
-
Janecka, J.E.1
-
47
-
-
84873326063
-
Genome-scale coestimation of species and gene trees
-
pmid: 23132911
-
B. Boussau et al., Genome-scale coestimation of species and gene trees. Genome Res. 23, 323-330 (2013). doi: 10.1101/gr.141978.112; pmid: 23132911
-
(2013)
Genome Res.
, vol.23
, pp. 323-330
-
-
Boussau, B.1
-
48
-
-
84860552871
-
Is recombination a problem for species-tree analyses?
-
pmid: 22215721
-
H. C. Lanier, L. L. Knowles, Is recombination a problem for species-tree analyses? Syst. Biol. 61, 691-701 (2012). doi: 10.1093/sysbio/syr128; pmid: 22215721
-
(2012)
Syst. Biol.
, vol.61
, pp. 691-701
-
-
Lanier, H.C.1
Knowles, L.L.2
-
49
-
-
67649240664
-
Rapid and accurate large-scale coestimation of sequence alignments and phylogenetic trees
-
pmid: 19541996
-
K. Liu, S. Raghavan, S. Nelesen, C. R. Linder, T. Warnow, Rapid and accurate large-scale coestimation of sequence alignments and phylogenetic trees. Science 324, 1561-1564 (2009). doi: 10.1126/science.1171243; pmid: 19541996
-
(2009)
Science
, vol.324
, pp. 1561-1564
-
-
Liu, K.1
Raghavan, S.2
Nelesen, S.3
Linder, C.R.4
Warnow, T.5
-
50
-
-
84959798530
-
Cases in which parsimony or compatibility methods will be positively misleading
-
J. Felsenstein, Cases in which parsimony or compatibility methods will be positively misleading. Syst. Zool. 27, 401 (1978). doi: 10.2307/2412923
-
(1978)
Syst. Zool.
, vol.27
, pp. 401
-
-
Felsenstein, J.1
-
51
-
-
0024958864
-
The Deinococcus-Thermus phylum and the effect of rRNA composition on phylogenetic tree construction
-
pmid: 11542160
-
W. G. Weisburg, S. J. Giovannoni, C. R. Woese, The Deinococcus-Thermus phylum and the effect of rRNA composition on phylogenetic tree construction. Syst. Appl. Microbiol. 11, 128-134 (1989). doi: 10.1016/S0723-2020(89)80051-7; pmid: 11542160
-
(1989)
Syst. Appl. Microbiol.
, vol.11
, pp. 128-134
-
-
Weisburg, W.G.1
Giovannoni, S.J.2
Woese, C.R.3
-
52
-
-
84891354563
-
Robustness to divergence time underestimation when inferring species trees from estimated gene trees
-
pmid: 23988674
-
M. DeGiorgio, J. H. Degnan, Robustness to divergence time underestimation when inferring species trees from estimated gene trees. Syst. Biol. 63, 66-82 (2014). doi: 10.1093/sysbio/syt059; pmid: 23988674
-
(2014)
Syst. Biol.
, vol.63
, pp. 66-82
-
-
Degiorgio, M.1
Degnan, J.H.2
-
53
-
-
43049089545
-
Testing congruence in phylogenomic analysis
-
pmid: 18288620
-
J. W. Leigh, E. Susko, M. Baumgartner, A. J. Roger, Testing congruence in phylogenomic analysis. Syst. Biol. 57, 104-115 (2008).doi: 10.1080/10635150801910436; pmid: 18288620
-
(2008)
Syst. Biol.
, vol.57
, pp. 104-115
-
-
Leigh, J.W.1
Susko, E.2
Baumgartner, M.3
Roger, A.J.4
-
54
-
-
38149146221
-
Tree compatibility and inferring evolutionary history
-
T. Warnow, Tree compatibility and inferring evolutionary history. J. Algorithms 16, 388-407 (1994). doi: 10.1006/jagm.1994.1018
-
(1994)
J. Algorithms
, vol.16
, pp. 388-407
-
-
Warnow, T.1
-
55
-
-
0018456690
-
New methods to color the vertices of a graph
-
D. Brélaz, New methods to color the vertices of a graph. Commun. ACM 22, 251-256 (1979). doi: 10.1145/359094.359101
-
(1979)
Commun. ACM
, vol.22
, pp. 251-256
-
-
Brélaz, D.1
-
56
-
-
0036431235
-
Phylogenetic relationships of the dwarf boas and a comparison of Bayesian and bootstrap measures of phylogenetic support
-
pmid: 12414316
-
T. P. Wilcox, D. J. Zwickl, T. A. Heath, D. M. Hillis, Phylogenetic relationships of the dwarf boas and a comparison of Bayesian and bootstrap measures of phylogenetic support. Mol. Phylogenet. Evol. 25, 361-371 (2002). doi: 10.1016/S1055-7903(02)00244-0; pmid: 12414316
-
(2002)
Mol. Phylogenet. Evol.
, vol.25
, pp. 361-371
-
-
Wilcox, T.P.1
Zwickl, D.J.2
Heath, T.A.3
Hillis, D.M.4
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