메뉴 건너뛰기




Volumn 1132, Issue , 2014, Pages 73-91

Plastid mRNA translation

(1)  Sugiura, Masahiro a  

a NONE

Author keywords

5 UTR; Chloroplast; Cis element; Codon; In vitro translation system; MRNA; Ribosome; Trans factor; Translation; TRNA

Indexed keywords

MESSENGER RNA; POLYPEPTIDE; TRANS ACTING FACTOR; CHLOROPLAST RNA; RIBOSOME RNA;

EID: 84910153571     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-62703-995-6_4     Document Type: Article
Times cited : (20)

References (137)
  • 1
    • 0026860017 scopus 로고
    • The chloroplast genome
    • Sugiura M (1992) The chloroplast genome. Plant Mol Biol 19: 149-168.
    • (1992) Plant Mol Biol , vol.19 , pp. 149-168
    • Sugiura, M.1
  • 2
    • 34548829676 scopus 로고    scopus 로고
    • Structure, function, and inheritance of plastid genomes
    • Bock R (ed), Springer, Potsdam-Golm
    • Bock R (2007) Structure, function, and inheritance of plastid genomes. In: Bock R (ed) Cell and molecular biology of plastids. Springer, Potsdam-Golm, pp 29-63.
    • (2007) Cell and molecular biology of plastids , pp. 29-63
    • Bock, R.1
  • 3
    • 84968989005 scopus 로고
    • The complete nucleotide sequence of the tobacco chloroplast genome: Its gene organization and expression
    • Shinozaki K, Ohme M, Tanaka M et al (1986) The complete nucleotide sequence of the tobacco chloroplast genome: its gene organization and expression. EMBO J 5: 2043-2049.
    • (1986) EMBO J , vol.5 , pp. 2043-2049
    • Shinozaki, K.1    Ohme, M.2    Tanaka, M.3
  • 4
    • 0030267939 scopus 로고    scopus 로고
    • Regulation of gene expression in chloroplasts of higher plants
    • Sugita M, Sugiura M (1996) Regulation of gene expression in chloroplasts of higher plants. Plant Mol Biol 32: 315-326.
    • (1996) Plant Mol Biol , vol.32 , pp. 315-326
    • Sugita, M.1    Sugiura, M.2
  • 5
    • 0001720981 scopus 로고
    • Rapid splicing and stepwise processing of a transcript from the psbB operon in tobacco chloroplasts
    • Tanaka M, Obokata J, Chunwongse J et al (1987) Rapid splicing and stepwise processing of a transcript from the psbB operon in tobacco chloroplasts. Mol Gen Genet 209: 427-431.
    • (1987) Mol Gen Genet , vol.209 , pp. 427-431
    • Tanaka, M.1    Obokata, J.2    Chunwongse, J.3
  • 6
    • 0023476294 scopus 로고
    • Six chloroplast genes (ndhA-F) homologous to human mitochondrial genes encoding components of the respiratory chain NADH dehydrogenase are actively expressed: Determination of the splice sites in ndhA and ndhB premRNAs
    • Matsubayashi T, Wakasugi T, Shinozaki K et al (1987) Six chloroplast genes (ndhA-F) homologous to human mitochondrial genes encoding components of the respiratory chain NADH dehydrogenase are actively expressed: determination of the splice sites in ndhA and ndhB premRNAs. Mol Gen Genet 210: 385-393.
    • (1987) Mol Gen Genet , vol.210 , pp. 385-393
    • Matsubayashi, T.1    Wakasugi, T.2    Shinozaki, K.3
  • 7
    • 0024077065 scopus 로고
    • Proteins encoded by a complex chloroplast transcription unit are each translated from both monocistronic and polycistronic mRNAs
    • Barkan A (1988) Proteins encoded by a complex chloroplast transcription unit are each translated from both monocistronic and polycistronic mRNAs. EMBO J 7: 2637-2644.
    • (1988) EMBO J , vol.7 , pp. 2637-2644
    • Barkan, A.1
  • 8
    • 0023953590 scopus 로고
    • Complex RNA maturation in chloroplasts. The psbB operon from spinach
    • Westhoff P, Herrmann RG (1988) Complex RNA maturation in chloroplasts. The psbB operon from spinach. Eur J Biochem 171: 551-564.
    • (1988) Eur J Biochem , vol.171 , pp. 551-564
    • Westhoff, P.1    Herrmann, R.G.2
  • 9
    • 0343293455 scopus 로고
    • Intron in the gene for the ribosomal protein Sl6 of tobacco chloroplast and its conserved boundary sequences
    • Shinozaki K, Deno H, Sugita M et al (1986) Intron in the gene for the ribosomal protein Sl6 of tobacco chloroplast and its conserved boundary sequences. Mol Gen Genet 202: 1-5.
    • (1986) Mol Gen Genet , vol.202 , pp. 1-5
    • Shinozaki, K.1    Deno, H.2    Sugita, M.3
  • 11
    • 51749091604 scopus 로고    scopus 로고
    • RNA editing in chloroplasts
    • Goringer HU (ed), Springer, Berlin
    • Sugiura M (2008) RNA editing in chloroplasts. In: Goringer HU (ed) RNA editing. Springer, Berlin, pp 123-142.
    • (2008) RNA editing , pp. 123-142
    • Sugiura, M.1
  • 13
    • 0023663880 scopus 로고
    • Control of plastid gene expression: 3′-inverted repeats act as mRNA processing and stabilizing elements, but do not terminate transcription
    • Stern DB, Gruissem W (1987) Control of plastid gene expression: 3′-inverted repeats act as mRNA processing and stabilizing elements, but do not terminate transcription. Cell 51: 1145-1157.
    • (1987) Cell , vol.51 , pp. 1145-1157
    • Stern, D.B.1    Gruissem, W.2
  • 14
    • 0033180187 scopus 로고    scopus 로고
    • Polyadenylation and degradation of mRNA in the chloroplast
    • Schuster G, Lisitsky I, Klaff P (1999) Polyadenylation and degradation of mRNA in the chloroplast. Plant Physiol 120: 937-944.
    • (1999) Plant Physiol , vol.120 , pp. 937-944
    • Schuster, G.1    Lisitsky, I.2    Klaff, P.3
  • 15
    • 0030729775 scopus 로고    scopus 로고
    • Both RNA editing and RNA cleavage are required for translation of tobacco chloroplast ndhD mRNA: A possible regulatory mechanism for the expression of a chloroplast operon consisting of functionally unrelated genes
    • Hirose T, Sugiura M (1997) Both RNA editing and RNA cleavage are required for translation of tobacco chloroplast ndhD mRNA: a possible regulatory mechanism for the expression of a chloroplast operon consisting of functionally unrelated genes. EMBO J 16: 6804-6811.
    • (1997) EMBO J , vol.16 , pp. 6804-6811
    • Hirose, T.1    Sugiura, M.2
  • 16
    • 58049191334 scopus 로고    scopus 로고
    • Termination codon-dependent translation of partially overlapping ndhC-ndhK transcripts in chloroplasts
    • Yukawa M, Sugiura M (2008) Termination codon-dependent translation of partially overlapping ndhC-ndhK transcripts in chloroplasts. Proc Natl Acad Sci USA 105: 19550-19554.
    • (2008) Proc Natl Acad Sci USA , vol.105 , pp. 19550-19554
    • Yukawa, M.1    Sugiura, M.2
  • 17
    • 0024979241 scopus 로고
    • Chloroplast gene expression: How plants turn their plastids on
    • Gruissem W (1989) Chloroplast gene expression: how plants turn their plastids on. Cell 56: 161-170.
    • (1989) Cell , vol.56 , pp. 161-170
    • Gruissem, W.1
  • 18
    • 37349096574 scopus 로고    scopus 로고
    • Translational control in prokaryotes
    • Mathews MB, Sonenberg N, Hershey JWB (eds), Cold Spring Harbor Laboratory Press, Cold Spring Harbor
    • Romby P, Springer M (2007) Translational control in prokaryotes. In: Mathews MB, Sonenberg N, Hershey JWB (eds) Translational control in biology and medicine. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, pp 803-827.
    • (2007) Translational control in biology and medicine , pp. 803-827
    • Romby, P.1    Springer, M.2
  • 20
    • 34548859827 scopus 로고    scopus 로고
    • Translation and translational regulation in chloroplasts
    • Bock R (ed), Springer, Potsdam-Golm
    • Peled-Zehavi H, Danon A (2007) Translation and translational regulation in chloroplasts. In: Bock R (ed) Cell and molecular biology of plastids. Springer, Potsdam-Golm, pp 249-281.
    • (2007) Cell and molecular biology of plastids , pp. 249-281
    • Peled-Zehavi, H.1    Danon, A.2
  • 21
    • 70350571205 scopus 로고    scopus 로고
    • The making of a chloroplast
    • Waters MT, Langdale JA (2009) The making of a chloroplast. EMBO J 28: 2861-2873.
    • (2009) EMBO J , vol.28 , pp. 2861-2873
    • Waters, M.T.1    Langdale, J.A.2
  • 22
    • 45249118388 scopus 로고    scopus 로고
    • Translational control of photosynthetic gene expression in phototrophic eukaryotes
    • Wobbe L, Schwarz C, Nickelsen J et al (2008) Translational control of photosynthetic gene expression in phototrophic eukaryotes. Physiol Plant 133: 507-515.
    • (2008) Physiol Plant , vol.133 , pp. 507-515
    • Wobbe, L.1    Schwarz, C.2    Nickelsen, J.3
  • 23
    • 0035141874 scopus 로고    scopus 로고
    • Posttranscriptional control of chloroplast gene expression. From RNA to photosynthetic complex
    • Rochaix J-D (2001) Posttranscriptional control of chloroplast gene expression. From RNA to photosynthetic complex. Plant Physiol 125: 142-144.
    • (2001) Plant Physiol , vol.125 , pp. 142-144
    • Rochaix, J.-D.1
  • 24
    • 0037010174 scopus 로고    scopus 로고
    • Translational regulations as specific traits of chloroplast gene expression
    • Choquet Y, Wollman F-A (2002) Translational regulations as specific traits of chloroplast gene expression. FEBS Lett 529: 39-42.
    • (2002) FEBS Lett , vol.529 , pp. 39-42
    • Choquet, Y.1    Wollman, F.-A.2
  • 25
    • 0033851987 scopus 로고    scopus 로고
    • Translation in chloroplasts
    • Zerges W (2000) Translation in chloroplasts. Biochimie 82: 583-601.
    • (2000) Biochimie , vol.82 , pp. 583-601
    • Zerges, W.1
  • 26
    • 4344633187 scopus 로고    scopus 로고
    • Regulation of chloroplast translation: Interactions of RNA elements, RNA-binding proteins and the plastid ribosome
    • Manuell A, Beligni MV, Yamaguchi K et al (2004) Regulation of chloroplast translation: interactions of RNA elements, RNA-binding proteins and the plastid ribosome. Biochem Soc Trans 32: 601-605.
    • (2004) Biochem Soc Trans , vol.32 , pp. 601-605
    • Manuell, A.1    Beligni, M.V.2    Yamaguchi, K.3
  • 27
    • 64049109732 scopus 로고    scopus 로고
    • RNA polyadenylation and decay in mitochondria and chloroplasts
    • Schuster G, Stern D (2009) RNA polyadenylation and decay in mitochondria and chloroplasts. Prog Mol Biol Transl Sci 85: 393-422.
    • (2009) Prog Mol Biol Transl Sci , vol.85 , pp. 393-422
    • Schuster, G.1    Stern, D.2
  • 28
    • 0018061581 scopus 로고
    • Low-molecular-weight (4. 5S) ribonucleic acid in higher-plant chloroplast ribosomes
    • Whitfeld PR, Jeaver CJ, Bottomley W et al (1978) Low-molecular-weight (4. 5S) ribonucleic acid in higher-plant chloroplast ribosomes. Biochem J 175: 1103-1112.
    • (1978) Biochem J , vol.175 , pp. 1103-1112
    • Whitfeld, P.R.1    Jeaver, C.J.2    Bottomley, W.3
  • 29
    • 0018589388 scopus 로고
    • 4. 5S ribonucleic acid, a novel ribosome component in the chloroplasts of flowering plants
    • Bowman CM, Dyer TA (1979) 4. 5S ribonucleic acid, a novel ribosome component in the chloroplasts of flowering plants. Biochem J 183: 605-613.
    • (1979) Biochem J , vol.183 , pp. 605-613
    • Bowman, C.M.1    Dyer, T.A.2
  • 30
    • 0024114213 scopus 로고
    • Nucleotide sequences of cDNAs encoding four complete nuclearencoded plastid ribosomal proteins
    • Gantt JS (1988) Nucleotide sequences of cDNAs encoding four complete nuclearencoded plastid ribosomal proteins. Curr Genet 14: 519-528.
    • (1988) Curr Genet , vol.14 , pp. 519-528
    • Gantt, J.S.1
  • 31
    • 84915926938 scopus 로고
    • Chloroplast genes coding for ribosomal proteins in land plants
    • Mache R, Stutz E, Subramanian AR (eds), Springer, Berlin
    • Sugiura M, Torazawa K, Wakasugi T et al (1991) Chloroplast genes coding for ribosomal proteins in land plants. In: Mache R, Stutz E, Subramanian AR (eds) The translational apparatus of photosynthetic organelles. Springer, Berlin, pp 59-69.
    • (1991) The translational apparatus of photosynthetic organelles , pp. 59-69
    • Sugiura, M.1    Torazawa, K.2    Wakasugi, T.3
  • 32
    • 0034666124 scopus 로고    scopus 로고
    • The plastid ribosomal proteins: Identification of all the proteins in the 30S subunit of an organelle ribosome (chloroplast)
    • Yamaguchi K, von Knoblauch K, Subramanian AR (2000) The plastid ribosomal proteins: identification of all the proteins in the 30S subunit of an organelle ribosome (chloroplast). J Biol Chem 275: 28455-28465.
    • (2000) J Biol Chem , vol.275 , pp. 28455-28465
    • Yamaguchi, K.1    von Knoblauch, K.2    Subramanian, A.R.3
  • 33
    • 0034665988 scopus 로고    scopus 로고
    • The plastid ribosomal proteins: Identification of all the proteins in the 50S subunit of an organelle ribosome (chloroplast)
    • Yamaguchi K, Subramanian AR (2000) The plastid ribosomal proteins: identification of all the proteins in the 50S subunit of an organelle ribosome (chloroplast). J Biol Chem 275: 28466-28482.
    • (2000) J Biol Chem , vol.275 , pp. 28466-28482
    • Yamaguchi, K.1    Subramanian, A.R.2
  • 34
    • 0034089160 scopus 로고    scopus 로고
    • Stoichiometric analysis of barley plastid ribosomal proteins
    • Maki Y, Tanaka A, Wada A (2000) Stoichiometric analysis of barley plastid ribosomal proteins. Plant Cell Physiol 41: 289-299.
    • (2000) Plant Cell Physiol , vol.41 , pp. 289-299
    • Maki, Y.1    Tanaka, A.2    Wada, A.3
  • 35
    • 0037238202 scopus 로고    scopus 로고
    • Proteomic identification of all plastid-specific ribosomal proteins in higher plant chloroplast 30S ribosomal subunit PSRP-2 (U1A-type domains), PSRP-3α/β (ycf65 homologue) and PSRP-4 (Thx homologue)
    • Yamaguchi K, Subramanian AR (2003) Proteomic identification of all plastid-specific ribosomal proteins in higher plant chloroplast 30S ribosomal subunit PSRP-2 (U1A-type domains), PSRP-3α/β (ycf65 homologue) and PSRP-4 (Thx homologue). Eur J Biochem 270: 190-205.
    • (2003) Eur J Biochem , vol.270 , pp. 190-205
    • Yamaguchi, K.1    Subramanian, A.R.2
  • 36
    • 0025883568 scopus 로고
    • Conservation and evolution of the nucleus-encoded and chloroplast-specific ribosomal proteins in pea and spinach
    • Carol P, Li YF, Mache R (1991) Conservation and evolution of the nucleus-encoded and chloroplast-specific ribosomal proteins in pea and spinach. Gene 103: 139-145.
    • (1991) Gene , vol.103 , pp. 139-145
    • Carol, P.1    Li, Y.F.2    Mache, R.3
  • 37
    • 4243555414 scopus 로고    scopus 로고
    • Plant ribosome recycling factor homologue is a chloroplastic protein and is bactericidal in Escherichia coli carrying temperature-sensitive ribosome recycling factor
    • Rolland N, Janosi L, Block MA et al (1999) Plant ribosome recycling factor homologue is a chloroplastic protein and is bactericidal in Escherichia coli carrying temperature-sensitive ribosome recycling factor. Proc Natl Acad Sci USA 96: 5464-5469.
    • (1999) Proc Natl Acad Sci USA , vol.96 , pp. 5464-5469
    • Rolland, N.1    Janosi, L.2    Block, M.A.3
  • 38
    • 0020659523 scopus 로고
    • Architecture of prokaryotic ribosomes
    • Wittmann HG (1983) Architecture of prokaryotic ribosomes. Annu Rev Biochem 52: 35-65.
    • (1983) Annu Rev Biochem , vol.52 , pp. 35-65
    • Wittmann, H.G.1
  • 39
    • 0020479195 scopus 로고
    • Characterization of Nicotiana tabacum chloroplast and cytoplasmic ribosomal proteins
    • Capel MS, Bourque DP (1982) Characterization of Nicotiana tabacum chloroplast and cytoplasmic ribosomal proteins. J Biol Chem 257: 7746-7755.
    • (1982) J Biol Chem , vol.257 , pp. 7746-7755
    • Capel, M.S.1    Bourque, D.P.2
  • 40
    • 0033804312 scopus 로고    scopus 로고
    • A novel nucleic acid-binding protein in the cyanobacterium Synechococcus sp. PCC6301: A soluble 33-kDa polypeptide with high sequence similarity to ribosomal protein S1
    • Sugita C, Sugiura M, Sugita M (2000) A novel nucleic acid-binding protein in the cyanobacterium Synechococcus sp. PCC6301: a soluble 33-kDa polypeptide with high sequence similarity to ribosomal protein S1. Mol Gen Genet 263: 655-663.
    • (2000) Mol Gen Genet , vol.263 , pp. 655-663
    • Sugita, C.1    Sugiura, M.2    Sugita, M.3
  • 41
    • 77950489175 scopus 로고    scopus 로고
    • PSRP1 is not a ribosomal protein, but a ribosome-binding factor that is recycled by the ribosome-recycling factor (RRF) and elongation factor G (EF-G)
    • Sharma MR, Dönhöfer A, Barat C et al (2010) PSRP1 is not a ribosomal protein, but a ribosome-binding factor that is recycled by the ribosome-recycling factor (RRF) and elongation factor G (EF-G). J Biol Chem 285: 4006-4014.
    • (2010) J Biol Chem , vol.285 , pp. 4006-4014
    • Sharma, M.R.1    Dönhöfer, A.2    Barat, C.3
  • 42
    • 37649008220 scopus 로고    scopus 로고
    • Cryo-EM study of the spinach chloroplast ribosome reveals the structural and functional roles of plastid-specific ribosomal proteins
    • Sharma MR, Wilson DN, Datta PP et al (2007) Cryo-EM study of the spinach chloroplast ribosome reveals the structural and functional roles of plastid-specific ribosomal proteins. Proc Natl Acad Sci USA 104: 19315-19320.
    • (2007) Proc Natl Acad Sci USA , vol.104 , pp. 19315-19320
    • Sharma, M.R.1    Wilson, D.N.2    Datta, P.P.3
  • 43
    • 57749098695 scopus 로고    scopus 로고
    • Rpl33, a nonessential plastid-encoded ribosomal protein in tobacco, is required under cold stress conditions
    • Rogalski M, Schöttler MA, Thiele W et al (2008) Rpl33, a nonessential plastid-encoded ribosomal protein in tobacco, is required under cold stress conditions. Plant Cell 20: 2221-2237.
    • (2008) Plant Cell , vol.20 , pp. 2221-2237
    • Rogalski, M.1    Schöttler, M.A.2    Thiele, W.3
  • 44
    • 0000917067 scopus 로고
    • Control of psbA gene expression; in mature Spirodela chloroplasts light regulation of 32-kd protein synthesis is independent of transcript level
    • Fromm H, Devic M, Fluhr R et al (1985) Control of psbA gene expression; in mature Spirodela chloroplasts light regulation of 32-kd protein synthesis is independent of transcript level. EMBO J 4: 291-295.
    • (1985) EMBO J , vol.4 , pp. 291-295
    • Fromm, H.1    Devic, M.2    Fluhr, R.3
  • 45
    • 51249175435 scopus 로고
    • Structure and function of the tobacco chloroplast genome
    • Sugiura M (1987) Structure and function of the tobacco chloroplast genome. Bot Mag Tokyo 100: 407-436.
    • (1987) Bot Mag Tokyo , vol.100 , pp. 407-436
    • Sugiura, M.1
  • 46
    • 0028899217 scopus 로고
    • Decoding with the A: I wobble pair is inefficient
    • Curran JF (1995) Decoding with the A: I wobble pair is inefficient. Nucleic Acids Res 23: 683-688.
    • (1995) Nucleic Acids Res , vol.23 , pp. 683-688
    • Curran, J.F.1
  • 47
    • 38849159102 scopus 로고    scopus 로고
    • Superwobbling facilitates translation with reduced tRNA sets
    • Rogalski M, Karcher D, Bock R (2008) Superwobbling facilitates translation with reduced tRNA sets. Nat Struct Mol Biol 15: 192-198.
    • (2008) Nat Struct Mol Biol , vol.15 , pp. 192-198
    • Rogalski, M.1    Karcher, D.2    Bock, R.3
  • 48
    • 69949126398 scopus 로고    scopus 로고
    • Arabidopsis tRNA adenosine deaminase arginine edits the wobble nucleotide of chloroplast tRNA Arg (ACG) and is essential for efficient chloroplast translation
    • Delannoy E, Le Ret M, Faivre-Nitschke E et al (2009) Arabidopsis tRNA adenosine deaminase arginine edits the wobble nucleotide of chloroplast tRNA Arg (ACG) and is essential for efficient chloroplast translation. Plant Cell 21: 2058-2071.
    • (2009) Plant Cell , vol.21 , pp. 2058-2071
    • Delannoy, E.1    Le Ret, M.2    Faivre-Nitschke, E.3
  • 49
    • 67649366361 scopus 로고    scopus 로고
    • Identification of the chloroplast adenosine-to-inosine tRNA editing enzyme
    • Karcher D, Bock R (2009) Identification of the chloroplast adenosine-to-inosine tRNA editing enzyme. RNA 15: 1251-1257.
    • (2009) RNA , vol.15 , pp. 1251-1257
    • Karcher, D.1    Bock, R.2
  • 50
    • 0026686195 scopus 로고
    • Glutamyltransfer RNA: A precursor of heme and chlorophyll biosynthesis
    • Jahn D, Verkamp E, Söll D (1992) Glutamyltransfer RNA: a precursor of heme and chlorophyll biosynthesis. Trends Biochem Sci 17: 215-218.
    • (1992) Trends Biochem Sci , vol.17 , pp. 215-218
    • Jahn, D.1    Verkamp, E.2    Söll, D.3
  • 51
    • 0000997789 scopus 로고
    • Novel mechanisms for maturation of chloroplast transfer RNA precursors
    • Wang MJ, Davis NW, Gegenheimer PA (1988) Novel mechanisms for maturation of chloroplast transfer RNA precursors. EMBO J 7: 1567-1574.
    • (1988) EMBO J , vol.7 , pp. 1567-1574
    • Wang, M.J.1    Davis, N.W.2    Gegenheimer, P.A.3
  • 52
    • 77953290462 scopus 로고    scopus 로고
    • A single Arabidopsis organellar protein has RNase P activity
    • Gobert A, Gutmann B, Taschner A et al (2010) A single Arabidopsis organellar protein has RNase P activity. Nat Struct Mol Biol 17: 740-744.
    • (2010) Nat Struct Mol Biol , vol.17 , pp. 740-744
    • Gobert, A.1    Gutmann, B.2    Taschner, A.3
  • 53
    • 12644284525 scopus 로고    scopus 로고
    • Complete sequencing of the chloroplast genome of the green alga Chlorella vulgaris reveals the existence of genes possibly involved in chloroplast division
    • Wakasugi T, Nagai T, Kapoor M et al (1997) Complete sequencing of the chloroplast genome of the green alga Chlorella vulgaris reveals the existence of genes possibly involved in chloroplast division. Proc Natl Acad Sci USA 94: 5967-5972.
    • (1997) Proc Natl Acad Sci USA , vol.94 , pp. 5967-5972
    • Wakasugi, T.1    Nagai, T.2    Kapoor, M.3
  • 54
    • 0032992346 scopus 로고    scopus 로고
    • The chloroplast infA gene with a functional UUA initiation codon
    • Hirose T, Ideue T, Wakasugi T et al (1999) The chloroplast infA gene with a functional UUA initiation codon. FEBS Lett 445: 169-172.
    • (1999) FEBS Lett , vol.445 , pp. 169-172
    • Hirose, T.1    Ideue, T.2    Wakasugi, T.3
  • 55
    • 34548808708 scopus 로고    scopus 로고
    • Translation of psbC mRNAs starts from the downstream GUG, not the upstream AUG, and requires the extended Shine-Dalgarno sequence in tobacco chloroplasts
    • Kuroda H, Suzuki H, Kusumegi T et al (2007) Translation of psbC mRNAs starts from the downstream GUG, not the upstream AUG, and requires the extended Shine-Dalgarno sequence in tobacco chloroplasts. Plant Cell Physiol 48: 1374-1378.
    • (2007) Plant Cell Physiol , vol.48 , pp. 1374-1378
    • Kuroda, H.1    Suzuki, H.2    Kusumegi, T.3
  • 56
    • 0026554792 scopus 로고
    • RNA editing in tobacco chloroplasts leads to the formation of a translatable psbL mRNA by a C to U substitution within the initiation codon
    • Kudla J, Igloi GL, Metzlaff M et al (1992) RNA editing in tobacco chloroplasts leads to the formation of a translatable psbL mRNA by a C to U substitution within the initiation codon. EMBO J 11: 1099-1103.
    • (1992) EMBO J , vol.11 , pp. 1099-1103
    • Kudla, J.1    Igloi, G.L.2    Metzlaff, M.3
  • 57
    • 0027933141 scopus 로고
    • The role of RNA editing in conservation of start codons in chloroplast genomes
    • Neckermann K, Zeltz P, Igloi GL et al (1994) The role of RNA editing in conservation of start codons in chloroplast genomes. Gene 146: 177-182.
    • (1994) Gene , vol.146 , pp. 177-182
    • Neckermann, K.1    Zeltz, P.2    Igloi, G.L.3
  • 58
    • 0027398358 scopus 로고
    • High-frequency plastid transformation in tobacco by selection for a chimeric aadA gene
    • Svab Z, Maliga P (1993) High-frequency plastid transformation in tobacco by selection for a chimeric aadA gene. Proc Natl Acad Sci USA 90: 913-917.
    • (1993) Proc Natl Acad Sci USA , vol.90 , pp. 913-917
    • Svab, Z.1    Maliga, P.2
  • 59
    • 1542368230 scopus 로고    scopus 로고
    • Plastid transformation in higher plants
    • Maliga P (2004) Plastid transformation in higher plants. Annu Rev Plant Biol 55: 289-313.
    • (2004) Annu Rev Plant Biol , vol.55 , pp. 289-313
    • Maliga, P.1
  • 60
    • 0024252185 scopus 로고
    • Extension inhibition analysis of translation initiation complexes
    • Hartz D, McPheeters DS, Traut R et al (1988) Extension inhibition analysis of translation initiation complexes. Methods Enzymol 164: 419-425.
    • (1988) Methods Enzymol , vol.164 , pp. 419-425
    • Hartz, D.1    McPheeters, D.S.2    Traut, R.3
  • 61
    • 0028450081 scopus 로고
    • Ribosome-binding sites on chloroplast rbcL and psbA mRNAs and light-induced initiation of D1 translation
    • Kim J, Mullet JE (1994) Ribosome-binding sites on chloroplast rbcL and psbA mRNAs and light-induced initiation of D1 translation. Plant Mol Biol 25: 437-448.
    • (1994) Plant Mol Biol , vol.25 , pp. 437-448
    • Kim, J.1    Mullet, J.E.2
  • 62
    • 0029971659 scopus 로고    scopus 로고
    • Cis-acting elements and trans-acting factors for accurate translation of chloroplast psbA mRNAs: Development of an in vitro translation system from tobacco chloroplasts
    • Hirose T, Sugiura M (1996) Cis-acting elements and trans-acting factors for accurate translation of chloroplast psbA mRNAs: development of an in vitro translation system from tobacco chloroplasts. EMBO J 15: 1687-1695.
    • (1996) EMBO J , vol.15 , pp. 1687-1695
    • Hirose, T.1    Sugiura, M.2
  • 63
    • 3042819080 scopus 로고    scopus 로고
    • Multiple elements required for translation of plastid atpB mRNA lacking the Shine-Dalgarno sequence
    • Hirose T, Sugiura M (2004) Multiple elements required for translation of plastid atpB mRNA lacking the Shine-Dalgarno sequence. Nucleic Acids Res 32: 3503-3510.
    • (2004) Nucleic Acids Res , vol.32 , pp. 3503-3510
    • Hirose, T.1    Sugiura, M.2
  • 64
    • 0027395945 scopus 로고
    • Accumulation of D1 polypeptide in tobacco plastids is regulated via the untranslated region of the psbA mRNA
    • Staub JM, Maliga P (1993) Accumulation of D1 polypeptide in tobacco plastids is regulated via the untranslated region of the psbA mRNA. EMBO J 12: 601-606.
    • (1993) EMBO J , vol.12 , pp. 601-606
    • Staub, J.M.1    Maliga, P.2
  • 65
    • 0032837715 scopus 로고    scopus 로고
    • In vivo analysis of plastid psbA, rbcL and rpl32 UTR elements by chloroplast transformation: Tobacco plastid gene expression is controlled by modulation of transcript levels and translation efficiency
    • Eibl C, Zou Z, Beck A et al (1999) In vivo analysis of plastid psbA, rbcL and rpl32 UTR elements by chloroplast transformation: tobacco plastid gene expression is controlled by modulation of transcript levels and translation efficiency. Plant J 19: 333-345.
    • (1999) Plant J , vol.19 , pp. 333-345
    • Eibl, C.1    Zou, Z.2    Beck, A.3
  • 66
    • 0028518530 scopus 로고
    • Translation of psbA mRNA is regulated by light via the 5′-untranslated region in tobacco plastids
    • Staub JM, Maliga P (1994) Translation of psbA mRNA is regulated by light via the 5′-untranslated region in tobacco plastids. Plant J 6: 547-553.
    • (1994) Plant J , vol.6 , pp. 547-553
    • Staub, J.M.1    Maliga, P.2
  • 67
    • 0038235935 scopus 로고    scopus 로고
    • The stemloop region of the tobacco psbA 5′UTR is an important determinant of mRNA stability and translation efficiency
    • Zou Z, Eibl C, Koop HU (2003) The stemloop region of the tobacco psbA 5′UTR is an important determinant of mRNA stability and translation efficiency. Mol Genet Genomics 269: 340-349.
    • (2003) Mol Genet Genomics , vol.269 , pp. 340-349
    • Zou, Z.1    Eibl, C.2    Koop, H.U.3
  • 68
    • 33846065241 scopus 로고    scopus 로고
    • A new in vitro translation system for nonradioactive assay from tobacco chloroplasts: Effect of pre-mRNA processing on translation in vitro
    • Yukawa M, Kuroda H, Sugiura M (2007) A new in vitro translation system for nonradioactive assay from tobacco chloroplasts: effect of pre-mRNA processing on translation in vitro. Plant J 49: 367-376.
    • (2007) Plant J , vol.49 , pp. 367-376
    • Yukawa, M.1    Kuroda, H.2    Sugiura, M.3
  • 69
    • 0027538631 scopus 로고
    • A methyl jasmonate-induced shift in the length of the 5′ untranslated region impairs translation of the plastid rbcL transcript in barley
    • Reinbothe S, Reinbothe C, Heintzen C et al (1993) A methyl jasmonate-induced shift in the length of the 5′ untranslated region impairs translation of the plastid rbcL transcript in barley. EMBO J 12: 1505-1512.
    • (1993) EMBO J , vol.12 , pp. 1505-1512
    • Reinbothe, S.1    Reinbothe, C.2    Heintzen, C.3
  • 70
    • 0028272427 scopus 로고
    • A nuclear mutation in maize blocks the processing and translation of several chloroplast mRNAs and provides evidence for the differential translation of alternative mRNA forms
    • Barkan A, Walker M, Nolasco M et al (1994) A nuclear mutation in maize blocks the processing and translation of several chloroplast mRNAs and provides evidence for the differential translation of alternative mRNA forms. EMBO J 13: 3170-3181.
    • (1994) EMBO J , vol.13 , pp. 3170-3181
    • Barkan, A.1    Walker, M.2    Nolasco, M.3
  • 71
    • 0033804343 scopus 로고    scopus 로고
    • Disruption of the petB-petD intergenic region in tobacco chloroplasts affects petD RNA accumulation and translation
    • Monde RA, Greene JC, Stern DB (2000) Disruption of the petB-petD intergenic region in tobacco chloroplasts affects petD RNA accumulation and translation. Mol Gen Genet 263: 610-618.
    • (2000) Mol Gen Genet , vol.263 , pp. 610-618
    • Monde, R.A.1    Greene, J.C.2    Stern, D.B.3
  • 72
    • 0034811993 scopus 로고    scopus 로고
    • The nucleus-encoded HCF107 gene of Arabidopsis provides a link between intercistronic RNA processing and the accumulation of translation-competent psbH transcripts in chloroplasts
    • Felder S, Meierhoff K, Sane AP et al (2001) The nucleus-encoded HCF107 gene of Arabidopsis provides a link between intercistronic RNA processing and the accumulation of translation-competent psbH transcripts in chloroplasts. Plant Cell 13: 2127-2141.
    • (2001) Plant Cell , vol.13 , pp. 2127-2141
    • Felder, S.1    Meierhoff, K.2    Sane, A.P.3
  • 73
    • 0345393082 scopus 로고    scopus 로고
    • A nucleus-encoded factor, CRR2, is essential for the expression of chloroplast ndhB in Arabidopsis
    • Hashimoto M, Endo T, Peltier G et al (2003) A nucleus-encoded factor, CRR2, is essential for the expression of chloroplast ndhB in Arabidopsis. Plant J 36: 541-549.
    • (2003) Plant J , vol.36 , pp. 541-549
    • Hashimoto, M.1    Endo, T.2    Peltier, G.3
  • 74
    • 78649618333 scopus 로고    scopus 로고
    • Knockout of the plastid RNase E leads to defective RNA processing and chloroplast ribosome deficiency
    • Walter M, Piepenburg K, Schöttler MA et al (2010) Knockout of the plastid RNase E leads to defective RNA processing and chloroplast ribosome deficiency. Plant J 64: 851-863.
    • (2010) Plant J , vol.64 , pp. 851-863
    • Walter, M.1    Piepenburg, K.2    Schöttler, M.A.3
  • 75
    • 0029294593 scopus 로고
    • Expression of a chimeric uidA gene indicates that polycistronic mRNAs are efficiently translated in tobacco plastids
    • Staub JM, Maliga P (1995) Expression of a chimeric uidA gene indicates that polycistronic mRNAs are efficiently translated in tobacco plastids. Plant J 7: 845-848.
    • (1995) Plant J , vol.7 , pp. 845-848
    • Staub, J.M.1    Maliga, P.2
  • 76
    • 27244432790 scopus 로고    scopus 로고
    • Characterization of heterologous multigene operons in transgenic chloroplasts: Transcription, processing, and translation
    • Quesada-Vargas T, Ruiz ON, Daniell H (2005) Characterization of heterologous multigene operons in transgenic chloroplasts: transcription, processing, and translation. Plant Physiol 138: 1746-1762.
    • (2005) Plant Physiol , vol.138 , pp. 1746-1762
    • Quesada-Vargas, T.1    Ruiz, O.N.2    Daniell, H.3
  • 77
    • 82255181553 scopus 로고    scopus 로고
    • The downstream atpE cistron is effi-ciently translated via its own cis-element in partially overlapping atpB-atpE dicistronic mRNAs in chloroplasts
    • Suzuki H, Kuroda H, Yukawa Y, Sugiura M (2011) The downstream atpE cistron is effi-ciently translated via its own cis-element in partially overlapping atpB-atpE dicistronic mRNAs in chloroplasts. Nucleic Acids Res 39: 9405-9412.
    • (2011) Nucleic Acids Res , vol.39 , pp. 9405-9412
    • Suzuki, H.1    Kuroda, H.2    Yukawa, Y.3    Sugiura, M.4
  • 78
    • 84875823833 scopus 로고    scopus 로고
    • Additional pathway to translate the downstream ndhK cistron in partially overlapping ndhC-ndhK mRNAs in chloroplasts
    • Yukawa M, Sugiura M (2013) Additional pathway to translate the downstream ndhK cistron in partially overlapping ndhC-ndhK mRNAs in chloroplasts. Proc Natl Acad Sci USA 110: 5701-5706.
    • (2013) Proc Natl Acad Sci USA , vol.110 , pp. 5701-5706
    • Yukawa, M.1    Sugiura, M.2
  • 79
    • 84860157682 scopus 로고    scopus 로고
    • Translation of partially overlapping psbD-psbC mRNAs in chloroplasts: The role of 5′-processing and translational coupling
    • Adachi Y, Kuroda H, Yukawa Y, Sugiura M (2012) Translation of partially overlapping psbD-psbC mRNAs in chloroplasts: the role of 5′-processing and translational coupling. Nucleic Acids Res 40: 3152-3158.
    • (2012) Nucleic Acids Res , vol.40 , pp. 3152-3158
    • Adachi, Y.1    Kuroda, H.2    Yukawa, Y.3    Sugiura, M.4
  • 80
    • 33645582244 scopus 로고    scopus 로고
    • The 2005 version of the chloroplast DNA sequence from tobacco (Nicotiana tabacum)
    • Yukawa M, Tsudzuki T, Sugiura M (2005) The 2005 version of the chloroplast DNA sequence from tobacco (Nicotiana tabacum). Plant Mol Biol Rep 23: 359-365.
    • (2005) Plant Mol Biol Rep , vol.23 , pp. 359-365
    • Yukawa, M.1    Tsudzuki, T.2    Sugiura, M.3
  • 81
    • 0032411339 scopus 로고    scopus 로고
    • Evolution and mechanism of translation in chloroplasts
    • Sugiura M, Hirose T, Sugita M (1998) Evolution and mechanism of translation in chloroplasts. Annu Rev Genet 32: 437-459.
    • (1998) Annu Rev Genet , vol.32 , pp. 437-459
    • Sugiura, M.1    Hirose, T.2    Sugita, M.3
  • 82
    • 0032479221 scopus 로고    scopus 로고
    • Translation of tobacco chloroplast rps14 mRNA depends on a Shine-Dalgarno-like sequence in the 5′-untranslated region but not on internal RNA editing in the coding region
    • Hirose T, Kusumegi T, Sugiura M (1998) Translation of tobacco chloroplast rps14 mRNA depends on a Shine-Dalgarno-like sequence in the 5′-untranslated region but not on internal RNA editing in the coding region. FEBS Lett 430: 257-260.
    • (1998) FEBS Lett , vol.430 , pp. 257-260
    • Hirose, T.1    Kusumegi, T.2    Sugiura, M.3
  • 83
    • 1042291444 scopus 로고    scopus 로고
    • Functional Shine-Dalgarno-like sequences for translational initiation of chloroplast mRNAs
    • Hirose T, Sugiura M (2004) Functional Shine-Dalgarno-like sequences for translational initiation of chloroplast mRNAs. Plant Cell Physiol 45: 114-117.
    • (2004) Plant Cell Physiol , vol.45 , pp. 114-117
    • Hirose, T.1    Sugiura, M.2
  • 84
    • 0016154301 scopus 로고
    • The 3′-terminal sequence of Escherichia coli 16S ribosomal RNA: Complementarity to nonsense triplets and ribosome binding sites
    • Shine J, Dalgarno L (1974) The 3′-terminal sequence of Escherichia coli 16S ribosomal RNA: complementarity to nonsense triplets and ribosome binding sites. Proc Natl Acad Sci USA 71: 1342-1346.
    • (1974) Proc Natl Acad Sci USA , vol.71 , pp. 1342-1346
    • Shine, J.1    Dalgarno, L.2
  • 85
    • 0028584414 scopus 로고
    • Determination of the optimal aligned spacing between the Shine-Dalgarno sequence and the translation initiation codon of Escherichia coli mRNAs
    • Chen H, Bjerknes M, Kumar R et al (1994) Determination of the optimal aligned spacing between the Shine-Dalgarno sequence and the translation initiation codon of Escherichia coli mRNAs. Nucleic Acids Res 22: 4953-4957.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4953-4957
    • Chen, H.1    Bjerknes, M.2    Kumar, R.3
  • 86
    • 0023373136 scopus 로고
    • Specialized ribosome system: Preferential translation of a single mRNA species by a subpopulation of mutated ribosomes in Escherichia coli
    • Hui A, de Boer HA (1987) Specialized ribosome system: preferential translation of a single mRNA species by a subpopulation of mutated ribosomes in Escherichia coli. Proc Natl Acad Sci USA 84: 4762-4766.
    • (1987) Proc Natl Acad Sci USA , vol.84 , pp. 4762-4766
    • Hui, A.1    de Boer, H.A.2
  • 87
    • 0023372380 scopus 로고
    • A single base change in the Shine-Dalgarno region of 16S rRNA of Escherichia coli affects translation of many proteins
    • Jacob WF, Santer M, Dahlberg AE (1987) A single base change in the Shine-Dalgarno region of 16S rRNA of Escherichia coli affects translation of many proteins. Proc Natl Acad Sci USA 84: 4757-4761.
    • (1987) Proc Natl Acad Sci USA , vol.84 , pp. 4757-4761
    • Jacob, W.F.1    Santer, M.2    Dahlberg, A.E.3
  • 88
    • 33846000662 scopus 로고    scopus 로고
    • Translation initiation of cyanobacterial rbcS mRNAs requires the 38-kDa ribosomal protein S1 but not the Shine-Dalgarno sequence: Development of a cyanobacterial in vitro translation system
    • Mutsuda M, Sugiura M (2006) Translation initiation of cyanobacterial rbcS mRNAs requires the 38-kDa ribosomal protein S1 but not the Shine-Dalgarno sequence: development of a cyanobacterial in vitro translation system. J Biol Chem 281: 38314-38321.
    • (2006) J Biol Chem , vol.281 , pp. 38314-38321
    • Mutsuda, M.1    Sugiura, M.2
  • 89
    • 0038029800 scopus 로고    scopus 로고
    • The Shine-Dalgarno-like sequence is a negative regulatory element for translation of tobacco chloroplast rps2 mRNA: An additional mechanism for translational control in chloroplasts
    • Plader W, Sugiura M (2003) The Shine-Dalgarno-like sequence is a negative regulatory element for translation of tobacco chloroplast rps2 mRNA: an additional mechanism for translational control in chloroplasts. Plant J 34: 377-382.
    • (2003) Plant J , vol.34 , pp. 377-382
    • Plader, W.1    Sugiura, M.2
  • 90
    • 63449105550 scopus 로고    scopus 로고
    • Efficient translation in chloroplasts requires element(s) upstream of the putative ribosome binding site from atpI
    • Baecker JJ, Sneddon JC, Hollingsworth MJ (2009) Efficient translation in chloroplasts requires element(s) upstream of the putative ribosome binding site from atpI. Am J Bot 96: 627-636.
    • (2009) Am J Bot , vol.96 , pp. 627-636
    • Baecker, J.J.1    Sneddon, J.C.2    Hollingsworth, M.J.3
  • 91
    • 79952296790 scopus 로고    scopus 로고
    • Selection of Shine-Dalgarno sequences in plastids
    • Drechsel O, Bock R (2010) Selection of Shine-Dalgarno sequences in plastids. Nucleic Acids Res. doi: 10. 1093/nar/gkq978.
    • (2010) Nucleic Acids Res
    • Drechsel, O.1    Bock, R.2
  • 92
    • 0035865938 scopus 로고    scopus 로고
    • Complementarity of the 16S rRNA penultimate stem with sequences downstream of the AUG destabilizes the plastid mRNAs
    • Kuroda H, Maliga P (2001) Complementarity of the 16S rRNA penultimate stem with sequences downstream of the AUG destabilizes the plastid mRNAs. Nucleic Acids Res 29: 970-975.
    • (2001) Nucleic Acids Res , vol.29 , pp. 970-975
    • Kuroda, H.1    Maliga, P.2
  • 93
    • 0000564084 scopus 로고
    • Light regulation of the synthesis of the large subunit of ribulose-1, 5-bisphosphate carboxylase in peas: Evidence for translational control
    • Inamine G, Nash B, Weissbach H et al (1985) Light regulation of the synthesis of the large subunit of ribulose-1, 5-bisphosphate carboxylase in peas: evidence for translational control. Proc Natl Acad Sci USA 82: 5690-5694.
    • (1985) Proc Natl Acad Sci USA , vol.82 , pp. 5690-5694
    • Inamine, G.1    Nash, B.2    Weissbach, H.3
  • 94
    • 0032192543 scopus 로고    scopus 로고
    • RbcL transcript levels in tobacco plastids are independent of light: Reduced dark transcription rate is compensated by increased mRNA stability
    • Shiina T, Allison L, Maliga P (1998) RbcL transcript levels in tobacco plastids are independent of light: reduced dark transcription rate is compensated by increased mRNA stability. Plant Cell 10: 1713-1722.
    • (1998) Plant Cell , vol.10 , pp. 1713-1722
    • Shiina, T.1    Allison, L.2    Maliga, P.3
  • 95
    • 48549095295 scopus 로고    scopus 로고
    • Plastid transcriptomics and translatomics of tomato fruit development and chloroplast-to-chromoplast differentiation: Chromoplast gene expression largely serves the production of a single protein
    • Kahlau S, Bock R (2008) Plastid transcriptomics and translatomics of tomato fruit development and chloroplast-to-chromoplast differentiation: chromoplast gene expression largely serves the production of a single protein. Plant Cell 20: 856-874.
    • (2008) Plant Cell , vol.20 , pp. 856-874
    • Kahlau, S.1    Bock, R.2
  • 96
    • 0033197795 scopus 로고    scopus 로고
    • A nuclear gene in maize required for the translation of the chloroplast atpB/E mRNA
    • McCormac DJ, Barkan A (1999) A nuclear gene in maize required for the translation of the chloroplast atpB/E mRNA. Plant Cell 11: 1709-1716.
    • (1999) Plant Cell , vol.11 , pp. 1709-1716
    • McCormac, D.J.1    Barkan, A.2
  • 97
    • 31544432771 scopus 로고    scopus 로고
    • RNA immunoprecipitation and microarray analysis show a chloroplast pentatricopeptide repeat protein to be associated with the 5′ region of mRNAs whose translation it activates
    • Schmitz-Linneweber C, Williams-Carrier R, Barkan A (2005) RNA immunoprecipitation and microarray analysis show a chloroplast pentatricopeptide repeat protein to be associated with the 5′ region of mRNAs whose translation it activates. Plant Cell 17: 2791-2804.
    • (2005) Plant Cell , vol.17 , pp. 2791-2804
    • Schmitz-Linneweber, C.1    Williams-Carrier, R.2    Barkan, A.3
  • 98
    • 34250657285 scopus 로고    scopus 로고
    • The nuclear-encoded factor HCF173 is involved in the initiation of translation of the psbA mRNA in Arabidopsis thaliana
    • Schult K, Meierhoff K, Paradies S et al (2007) The nuclear-encoded factor HCF173 is involved in the initiation of translation of the psbA mRNA in Arabidopsis thaliana. Plant Cell 19: 1329-1346.
    • (2007) Plant Cell , vol.19 , pp. 1329-1346
    • Schult, K.1    Meierhoff, K.2    Paradies, S.3
  • 99
    • 0031467566 scopus 로고    scopus 로고
    • Complex formation of the spinach chloroplast psbA mRNA 5′ untranslated region with proteins is dependent on the RNA structure
    • Klaff P, Mundt SM, Steger G (1997) Complex formation of the spinach chloroplast psbA mRNA 5′ untranslated region with proteins is dependent on the RNA structure. RNA 3: 1468-1479.
    • (1997) RNA , vol.3 , pp. 1468-1479
    • Klaff, P.1    Mundt, S.M.2    Steger, G.3
  • 100
    • 0033040956 scopus 로고    scopus 로고
    • ATP synthase 5′ untranslated regions are specifically bound by chloroplast polypeptides
    • Hotchkiss TL, Hollingsworth MJ (1999) ATP synthase 5′ untranslated regions are specifically bound by chloroplast polypeptides. Curr Genet 35: 512-520.
    • (1999) Curr Genet , vol.35 , pp. 512-520
    • Hotchkiss, T.L.1    Hollingsworth, M.J.2
  • 101
    • 28044455652 scopus 로고    scopus 로고
    • RNA-protein complexes that form in the spinach chloroplast atpI 5′ untranslated region can be divided into two subcomplexes, each comprised of unique cis-elements and trans-factors
    • Merhige PM, Both-Kim D, Robida MD et al (2005) RNA-protein complexes that form in the spinach chloroplast atpI 5′ untranslated region can be divided into two subcomplexes, each comprised of unique cis-elements and trans-factors. Curr Genet 48: 256-264.
    • (2005) Curr Genet , vol.48 , pp. 256-264
    • Merhige, P.M.1    Both-Kim, D.2    Robida, M.D.3
  • 102
    • 0036944709 scopus 로고    scopus 로고
    • Proteins are shared among RNAprotein complexes that form in the 5′untranslated regions of spinach chloroplast mRNAs
    • Robida MD, Merhige PM, Hollingsworth MJ (2002) Proteins are shared among RNAprotein complexes that form in the 5′untranslated regions of spinach chloroplast mRNAs. Curr Genet 41: 53-62.
    • (2002) Curr Genet , vol.41 , pp. 53-62
    • Robida, M.D.1    Merhige, P.M.2    Hollingsworth, M.J.3
  • 103
    • 0000525279 scopus 로고
    • A 43 kD lightregulated chloroplast RNA-binding protein interacts with the psbA 5′ non-translated leader RNA
    • Klaff P, Gruissem W (1995) A 43 kD lightregulated chloroplast RNA-binding protein interacts with the psbA 5′ non-translated leader RNA. Photosynth Res 46: 235-248.
    • (1995) Photosynth Res , vol.46 , pp. 235-248
    • Klaff, P.1    Gruissem, W.2
  • 104
    • 0032524468 scopus 로고    scopus 로고
    • Characterization of protein-binding to the spinach chloroplast psbA mRNA 5′untranslated region
    • Alexander C, Faber N, Klaff P (1998) Characterization of protein-binding to the spinach chloroplast psbA mRNA 5′untranslated region. Nucleic Acid Res 26: 2265-2272.
    • (1998) Nucleic Acid Res , vol.26 , pp. 2265-2272
    • Alexander, C.1    Faber, N.2    Klaff, P.3
  • 105
    • 0034284380 scopus 로고    scopus 로고
    • RNAbinding characteristics of the chloroplast S1-like ribosomal protein CS1
    • Shteiman-Kotler A, Schuster G (2000) RNAbinding characteristics of the chloroplast S1-like ribosomal protein CS1. Nucleic Acids Res 28: 3310-3315.
    • (2000) Nucleic Acids Res , vol.28 , pp. 3310-3315
    • Shteiman-Kotler, A.1    Schuster, G.2
  • 106
    • 33845687519 scopus 로고    scopus 로고
    • ATAB2 is a novel factor in the signalling pathway of light-controlled synthesis of photosystem proteins
    • Barneche F, Winter V, Crevecoeur M et al (2006) ATAB2 is a novel factor in the signalling pathway of light-controlled synthesis of photosystem proteins. EMBO J 25: 5907-5918.
    • (2006) EMBO J , vol.25 , pp. 5907-5918
    • Barneche, F.1    Winter, V.2    Crevecoeur, M.3
  • 107
    • 0033865042 scopus 로고    scopus 로고
    • Synthesis, assembly and degradation of thylakoid membrane proteins
    • Choquet Y, Vallon O (2000) Synthesis, assembly and degradation of thylakoid membrane proteins. Biochimie 82: 615-634.
    • (2000) Biochimie , vol.82 , pp. 615-634
    • Choquet, Y.1    Vallon, O.2
  • 108
    • 34547514749 scopus 로고    scopus 로고
    • Rubisco largesubunit translation is autoregulated in response to its assembly state in tobacco chloroplasts
    • Wostrikoff K, Stern D (2007) Rubisco largesubunit translation is autoregulated in response to its assembly state in tobacco chloroplasts. Proc Natl Acad Sci USA 104: 6466-6471.
    • (2007) Proc Natl Acad Sci USA , vol.104 , pp. 6466-6471
    • Wostrikoff, K.1    Stern, D.2
  • 109
    • 38949099382 scopus 로고    scopus 로고
    • Ribulose 1, 5-bisphosphate carboxylase/oxygenase large subunit translation is regulated in a small subunit-independent manner in the expanded leaves of tobacco
    • Ichikawa K, Miyake C, Iwano M et al (2008) Ribulose 1, 5-bisphosphate carboxylase/oxygenase large subunit translation is regulated in a small subunit-independent manner in the expanded leaves of tobacco. Plant Cell Physiol 49: 214-225.
    • (2008) Plant Cell Physiol , vol.49 , pp. 214-225
    • Ichikawa, K.1    Miyake, C.2    Iwano, M.3
  • 110
    • 0023881275 scopus 로고
    • Light-regulated translation of chloroplast proteins. I. Transcripts of psaA-psaB, psbA, and rbcL are associated with polysomes in dark-grown and illuminated barley seedlings
    • Klein RR, Mason HS, Mullet JE (1988) Light-regulated translation of chloroplast proteins. I. Transcripts of psaA-psaB, psbA, and rbcL are associated with polysomes in dark-grown and illuminated barley seedlings. J Cell Biol 106: 289-301.
    • (1988) J Cell Biol , vol.106 , pp. 289-301
    • Klein, R.R.1    Mason, H.S.2    Mullet, J.E.3
  • 111
    • 0032190183 scopus 로고    scopus 로고
    • Light regulates the rate of translation elongation of chloroplast reaction center protein D1
    • Edhofer I, Mühlbauer SK, Eichacker LA (1998) Light regulates the rate of translation elongation of chloroplast reaction center protein D1. Eur J Biochem 257: 78-84.
    • (1998) Eur J Biochem , vol.257 , pp. 78-84
    • Edhofer, I.1    Mühlbauer, S.K.2    Eichacker, L.A.3
  • 112
    • 0002637849 scopus 로고
    • The level of stromal ATP regulates translation of the D1 protein in isolated chloroplasts
    • Kuroda H, Inagaki N, Satoh K (1992) The level of stromal ATP regulates translation of the D1 protein in isolated chloroplasts. Plant Cell Physiol 33: 33-39.
    • (1992) Plant Cell Physiol , vol.33 , pp. 33-39
    • Kuroda, H.1    Inagaki, N.2    Satoh, K.3
  • 113
    • 0027404576 scopus 로고
    • ATP-dependent protein synthesis in isolated pea chloroplasts: Evidence for accumulation of a translation intermediate of the D1 protein
    • Taniguchi M, Kuroda H, Satoh K (1993) ATP-dependent protein synthesis in isolated pea chloroplasts: evidence for accumulation of a translation intermediate of the D1 protein. FEBS Lett 317: 57-61.
    • (1993) FEBS Lett , vol.317 , pp. 57-61
    • Taniguchi, M.1    Kuroda, H.2    Satoh, K.3
  • 114
    • 0038009150 scopus 로고    scopus 로고
    • A mechanism for light-induced translation of the rbcL mRNA encoding the large subunit of ribulose-1, 5-bisphosphate carboxylase in barley chloroplasts
    • Kim J, Mullet JE (2003) A mechanism for light-induced translation of the rbcL mRNA encoding the large subunit of ribulose-1, 5-bisphosphate carboxylase in barley chloroplasts. Plant Cell Physiol 44: 491-499.
    • (2003) Plant Cell Physiol , vol.44 , pp. 491-499
    • Kim, J.1    Mullet, J.E.2
  • 115
    • 0023040735 scopus 로고
    • Optimization of protein synthesis in isolated higher plant chloroplasts. Identification of paused translation intermediates
    • Mullet JE, Klein RR, Grossman AR (1986) Optimization of protein synthesis in isolated higher plant chloroplasts. Identification of paused translation intermediates. Eur J Biochem 155: 331-338.
    • (1986) Eur J Biochem , vol.155 , pp. 331-338
    • Mullet, J.E.1    Klein, R.R.2    Grossman, A.R.3
  • 116
    • 0028483668 scopus 로고
    • Ribosomes pause during the expression of the large ATP synthase gene cluster in spinach chloroplasts
    • Stollar NE, Kim J-K, Hollingsworth MJ (1994) Ribosomes pause during the expression of the large ATP synthase gene cluster in spinach chloroplasts. Plant Physiol 105: 1167-1177.
    • (1994) Plant Physiol , vol.105 , pp. 1167-1177
    • Stollar, N.E.1    Kim, J.-K.2    Hollingsworth, M.J.3
  • 117
    • 0028826929 scopus 로고
    • In vitro synthesis and assembly of photosystem II core proteins. The D1 protein can be incorporated into photosystem II in isolated chloroplasts and thylakoids
    • van Wijk KJ, Bingsmark S, Aro E-M et al (1995) In vitro synthesis and assembly of photosystem II core proteins. The D1 protein can be incorporated into photosystem II in isolated chloroplasts and thylakoids. J Biol Chem 270: 25685-25695.
    • (1995) J Biol Chem , vol.270 , pp. 25685-25695
    • van Wijk, K.J.1    Bingsmark, S.2    Aro, E.-M.3
  • 118
    • 0033081464 scopus 로고    scopus 로고
    • Interactions of ribosome nascent chain complexes of the chloroplast-encoded D1 thylakoid membrane protein with cpSRP54
    • Nilsson R, Brunner J, Hoffman NE et al (1999) Interactions of ribosome nascent chain complexes of the chloroplast-encoded D1 thylakoid membrane protein with cpSRP54. EMBO J 18: 733-742.
    • (1999) EMBO J , vol.18 , pp. 733-742
    • Nilsson, R.1    Brunner, J.2    Hoffman, N.E.3
  • 119
    • 0033791940 scopus 로고    scopus 로고
    • Biogenesis of the chloroplast-encoded D1 protein: Regulation of translation elongation, insertion, and assembly into photosystem II
    • Zhang L, Paakkarinen V, van Wijk KJ et al (2000) Biogenesis of the chloroplast-encoded D1 protein: regulation of translation elongation, insertion, and assembly into photosystem II. Plant Cell 12: 1769-1781.
    • (2000) Plant Cell , vol.12 , pp. 1769-1781
    • Zhang, L.1    Paakkarinen, V.2    van Wijk, K.J.3
  • 120
    • 0035144228 scopus 로고    scopus 로고
    • Sequences downstream of the translation initiation codon are important determinants of translation effi-ciency in chloroplasts
    • Kuroda H, Maliga P (2001) Sequences downstream of the translation initiation codon are important determinants of translation effi-ciency in chloroplasts. Plant Physiol 125: 430-436.
    • (2001) Plant Physiol , vol.125 , pp. 430-436
    • Kuroda, H.1    Maliga, P.2
  • 121
    • 0001233271 scopus 로고
    • Localization and properties of transcripts of psbA and rbcL genes in the stroma of spinach chloroplast
    • Minami E, Shinohara K, Kawakami N et al (1988) Localization and properties of transcripts of psbA and rbcL genes in the stroma of spinach chloroplast. Plant Cell Physiol 29: 1303-1309.
    • (1988) Plant Cell Physiol , vol.29 , pp. 1303-1309
    • Minami, E.1    Shinohara, K.2    Kawakami, N.3
  • 122
    • 0033135557 scopus 로고    scopus 로고
    • The stromal protein large subunit of ribulose-1, 5-bisphosphate carboxylase is translated by membrane-bound ribosomes
    • Mühlbauer SK, Eichacker LA (1999) The stromal protein large subunit of ribulose-1, 5-bisphosphate carboxylase is translated by membrane-bound ribosomes. Eur J Biochem 261: 784-788.
    • (1999) Eur J Biochem , vol.261 , pp. 784-788
    • Mühlbauer, S.K.1    Eichacker, L.A.2
  • 123
    • 77950526756 scopus 로고    scopus 로고
    • The role of heterologous chloroplast sequence elements in transgene integration and expression
    • Ruhlman T, Verma D, Samson N et al (2010) The role of heterologous chloroplast sequence elements in transgene integration and expression. Plant Physiol 152: 2088-2104.
    • (2010) Plant Physiol , vol.152 , pp. 2088-2104
    • Ruhlman, T.1    Verma, D.2    Samson, N.3
  • 124
    • 0025007660 scopus 로고
    • Three distinct ribonucleoproteins from tobacco chloroplasts: Each contains a unique amino terminal acidic domain and two ribonucleoprotein consensus motifs
    • Li Y, Sugiura M (1990) Three distinct ribonucleoproteins from tobacco chloroplasts: each contains a unique amino terminal acidic domain and two ribonucleoprotein consensus motifs. EMBO J 9: 3059-3066.
    • (1990) EMBO J , vol.9 , pp. 3059-3066
    • Li, Y.1    Sugiura, M.2
  • 125
    • 0026422411 scopus 로고
    • Nucleic acid-binding specificities of tobacco chloroplast ribonucleoproteins
    • Li Y, Sugiura M (1991) Nucleic acid-binding specificities of tobacco chloroplast ribonucleoproteins. Nucleic Acids Res 19: 2893-2896.
    • (1991) Nucleic Acids Res , vol.19 , pp. 2893-2896
    • Li, Y.1    Sugiura, M.2
  • 126
    • 0032755049 scopus 로고    scopus 로고
    • Chloroplast ribonucleoproteins are associated with both mRNAs and intron-containing precursor tRNAs
    • Nakamura T, Ohta M, Sugiura M et al (1999) Chloroplast ribonucleoproteins are associated with both mRNAs and intron-containing precursor tRNAs. FEBS Lett 460: 437-441.
    • (1999) FEBS Lett , vol.460 , pp. 437-441
    • Nakamura, T.1    Ohta, M.2    Sugiura, M.3
  • 127
    • 0035808422 scopus 로고    scopus 로고
    • Chloroplast ribonucleoproteins function as a stabilizing factor of ribosome-free mRNAs in the stroma
    • Nakamura T, Ohta M, Sugiura M et al (2001) Chloroplast ribonucleoproteins function as a stabilizing factor of ribosome-free mRNAs in the stroma. J Biol Chem 276: 147-152.
    • (2001) J Biol Chem , vol.276 , pp. 147-152
    • Nakamura, T.1    Ohta, M.2    Sugiura, M.3
  • 128
    • 0035282916 scopus 로고    scopus 로고
    • Involvement of a site-specific trans-acting factor and a common RNA-binding protein in the editing of chloroplast mRNAs: Development of a chloroplast in vitro RNA editing system
    • Hirose T, Sugiura M (2001) Involvement of a site-specific trans-acting factor and a common RNA-binding protein in the editing of chloroplast mRNAs: development of a chloroplast in vitro RNA editing system. EMBO J 20: 1144-1152.
    • (2001) EMBO J , vol.20 , pp. 1144-1152
    • Hirose, T.1    Sugiura, M.2
  • 129
    • 65249117747 scopus 로고    scopus 로고
    • Chloroplast ribonucleoprotein CP31A is required for editing and stability of specific chloroplast mRNAs
    • Tillich M, Hardel SL, Kupsch C et al (2009) Chloroplast ribonucleoprotein CP31A is required for editing and stability of specific chloroplast mRNAs. Proc Natl Acad Sci USA 106: 6002-6007.
    • (2009) Proc Natl Acad Sci USA , vol.106 , pp. 6002-6007
    • Tillich, M.1    Hardel, S.L.2    Kupsch, C.3
  • 130
    • 78651068887 scopus 로고    scopus 로고
    • Mechanism of RNA stabilization and translational activation by a pentatricopeptide repeat protein
    • Prikryl J, Rojas M, Schuster G et al (2010) Mechanism of RNA stabilization and translational activation by a pentatricopeptide repeat protein. Proc Natl Acad Sci USA 108: 1415-1420.
    • (2010) Proc Natl Acad Sci USA , vol.108 , pp. 1415-1420
    • Prikryl, J.1    Rojas, M.2    Schuster, G.3
  • 131
    • 56549095978 scopus 로고    scopus 로고
    • Pentatricopeptide repeat proteins: A socket set for organelle gene expression
    • Schmitz-Linneweber C, Small I (2008) Pentatricopeptide repeat proteins: a socket set for organelle gene expression. Trends Plant Sci 13: 663-670.
    • (2008) Trends Plant Sci , vol.13 , pp. 663-670
    • Schmitz-Linneweber, C.1    Small, I.2
  • 132
    • 0038082064 scopus 로고    scopus 로고
    • Identification of RNA editing sites in chloroplast transcripts from the maternal and paternal progenitors of tobacco (Nicotiana tabacum): Comparative analysis shows the involvement of distinct trans-factors for ndhB editing
    • Sasaki T, Yukawa Y, Miyamoto T et al (2003) Identification of RNA editing sites in chloroplast transcripts from the maternal and paternal progenitors of tobacco (Nicotiana tabacum): comparative analysis shows the involvement of distinct trans-factors for ndhB editing. Mol Biol Evol 20: 1028-1035.
    • (2003) Mol Biol Evol , vol.20 , pp. 1028-1035
    • Sasaki, T.1    Yukawa, Y.2    Miyamoto, T.3
  • 133
    • 33845626632 scopus 로고    scopus 로고
    • Translation efficiencies of synonymous codons are not always correlated with codon usage in tobacco chloroplasts
    • Nakamura M, Sugiura M (2007) Translation efficiencies of synonymous codons are not always correlated with codon usage in tobacco chloroplasts. Plant J 49: 128-134.
    • (2007) Plant J , vol.49 , pp. 128-134
    • Nakamura, M.1    Sugiura, M.2
  • 134
    • 0021958933 scopus 로고
    • Codon usage and tRNA content in unicellular and multicellular organisms
    • Ikemura T (1985) Codon usage and tRNA content in unicellular and multicellular organisms. Mol Biol Evol 2: 13-34.
    • (1985) Mol Biol Evol , vol.2 , pp. 13-34
    • Ikemura, T.1
  • 136
    • 66649083782 scopus 로고    scopus 로고
    • Selection of synonymous codons for better expression of recombinant proteins in tobacco chloroplasts
    • Nakamura M, Sugiura M (2009) Selection of synonymous codons for better expression of recombinant proteins in tobacco chloroplasts. Plant Biotechnol 26: 53-56.
    • (2009) Plant Biotechnol , vol.26 , pp. 53-56
    • Nakamura, M.1    Sugiura, M.2
  • 137
    • 78650809400 scopus 로고    scopus 로고
    • Translation efficiencies of synonymous codons for arginine differ dramatically and are not correlated with codon usage in chloroplasts
    • Nakamura M, Sugiura M (2011) Translation efficiencies of synonymous codons for arginine differ dramatically and are not correlated with codon usage in chloroplasts. Gene 472: 50-54.
    • (2011) Gene , vol.472 , pp. 50-54
    • Nakamura, M.1    Sugiura, M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.