Translation initiation of cyanobacterial rbcS mRNAs requires the 38-kDa ribosomal protein S1 but not the shine-dalgarno sequence: Development of a cyanobacterial in vitro translation system

Journal of Biological Chemistry

Volumn 281, Issue 50, 2006, Pages 38314-38321

  Mutsuda, Michinori ^a   Sugiura, Masahiro ^a,b,c  

^a NAGOYA UNIVERSITY   (Japan)

^b NAGOYA CITY UNIVERSITY   (Japan)

^c SUGIYAMA JOGAKUEN UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

CYANOBACTERIA; GENOME STRUCTURE; SYNECHOCOCCUS CELLS; TRANSLATION INITIATION;

CELLS; GENES; NITROGEN FIXATION; NUCLEIC ACIDS; PHOTOSYNTHESIS; PROTEINS; RNA;

BACTERIA;

BETA GALACTOSIDASE; MESSENGER RNA; RBCL MESSENGER RNA; RBCS MESSENGER RNA; RIBOSOMAL PROTEIN S1; RIBOSOME PROTEIN; RIBULOSEBISPHOSPHATE CARBOXYLASE; UNCLASSIFIED DRUG;

5' UNTRANSLATED REGION; AMINO ACID SEQUENCE; ARTICLE; CODON; CONTROLLED STUDY; CROSS LINKING; CYANOBACTERIUM; ESCHERICHIA COLI; GENE DELETION; IMMUNOPRECIPITATION; IN VITRO STUDY; MUTATIONAL ANALYSIS; NONHUMAN; PRIORITY JOURNAL; SYNECHOCOCCUS; TRANSLATION INITIATION;

BASE SEQUENCE; CYANOBACTERIA; DNA PRIMERS; MOLECULAR SEQUENCE DATA; PROTEIN BIOSYNTHESIS; RIBULOSE-BISPHOSPHATE CARBOXYLASE; RNA, MESSENGER;

CYANOBACTERIA; ESCHERICHIA COLI; SYNECHOCOCCUS;

EID: 33846000662     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M604647200     Document Type: Article

References (49)

1. McFadden, G. I. (1999) Curr. Opin. Plant Biol. 2, 513-519
2. Sato, N. (2002) Genome Inform. Ser. Workshop Genome Inform. 13, 173-182
3. Raven, J. A., and Allen, J. F. (2003) Genome Biol. 4, 209
4. Gruber, T. M., and Gross, C. A. (2003) Annu. Rev. Microbiol. 57, 441-466
5. Thornton, L. E., Ohkawa, H., Roose, J. L., Kashino, Y., Keren, N., and Pakrasi, H. B. (2004) Plant Cell 16, 2164-2175
6. Ogawa, T., Bao, D. H., Katoh, H., Shibata, M., Pakrasi, H. B., and Bhattacharyya-Pakrasi, M. (2002) J. Biol. Chem. 277, 28981-28986
7. Michel, K. P., and Pistorius, E. K. (2004) Physiol. Plant 120, 36-50
8. Wang, T., Shen, G., Balasubramanian, R., McIntosh, L., Bryant, D. A., and Golbeck, J. H. (2004) J. Bacteriol. 186, 956-967
9. Choquet, Y., and Wollman, F. A. (2002) FEBS Lett. 529, 39-42
10. Sugita, M., and Sugiura, M. (1994) Nucleic Acids Res. 22, 25-31
11. Sato, N. (1995) Nucleic Acids Res. 23, 2161-2167
12. Sato, N., and Wada, A. (1996) Plant Cell Physiol. 37, 1150-1160
13. Mutsuda, M., Sugiura, M., and Sugita, M. (1999) Plant Cell Physiol. 40, 1203-1209
14. McCarthy, J. E., and Brimacombe, R. (1994) Trends Genet. 10, 402-407
15. Green, R., and Noller, H. F. (1997) Annu. Rev. Biochem. 66, 679-716
16. Gold, L. (1988) Annu. Rev. Biochem. 57, 199-233
17. Ringquist, S., Shinedling, S., Barrick, D., Green, L., Binkley, J., Stormo, G. D., and Gold, L. (1992) Mol. Microbiol. 6, 1219-1229
18. Hirosawa, M., Sazuka, T., and Yada, T. (1997) DNA Res. 4, 179-184
19. Ma, J., Campbell, A., and Karlin, S. (2002) J. Bacteriol. 184, 5733-5745
20. Sugiura, M., Hirose, T., and Sugita, M. (1998) Annu. Rev. Genet. 32, 437-459
21. Hirose, T., and Sugiura, M. (1996) EMBO J. 15, 1687-1695
22. Hirose, T., and Sugiura, M. (2004) Nucleic Acids Res. 30, 3503-3510
23. Plader, W., and Sugiura, M. (2003) Plant J. 34, 377-382
24. Subramanian, A. R. (1993) Trends Biochem. Sci. 18, 177-181
25. Yamaguchi, K., and Subramanian, A. R. (2000) J. Biol. Chem. 275, 28466-28482
26. Yamaguchi, K., Von Knoblauch, K., and Subramanian, A. R. (2000) J. Biol. Chem. 275, 28455-28465
27. Yamaguchi, K., Prieto, S., Beligni, M. V., Haynes, P. A., McDonald, W. H., Yates, J. R., III, and Mayfield, S. P. (2002) Plant Cell 14, 2957-2974
28. Yamaguchi, K., Beligni, M. V., Prieto, S., Haynes, P. A., McDonald, W. H., Yates, J. R., III, and Mayfield, S. P. (2003) J. Biol. Chem. 278, 33774-33785
29. Yamaguchi, K., and Subramanian, A. R. (2003) Eur. J. Biochem. 270, 190-205
30. Sato, N., Tachikawa, T., Wada, A., and Tanaka, A. (1997) J. Bacteriol. 179, 7063-7071
31. Sato, N., Wada, A., and Tanaka, A. (1998) Plant Cell Physiol. 39, 1367-1371
32. Zhang, J., and Deutscher, M. P. (1992) Proc. Natl. Acad. Sci. U. S. A. 89, 2605-2609
33. Boni, I. V., Isaeva, D. M., Musychenko, M. L., and Tzareva, N. V. (1991) Nucleic Acids Res. 19, 155-162
34. Sengupta, J., Agrawal, R. K., and Frank, J. (2001) Proc. Natl. Acad. Sci. U. S. A. 98, 11991-11996
35. Sugita, M., Sugita, C., and Sugiura, M. (1995) Mol. Gen. Genet. 246, 142-147
36. Sugita, C., Sugiura, M., and Sugita, M. (2000) Mol. Gen. Genet. 263, 655-663
37. Subramanian, A. R. (1983) Prog. Nucleic Acids Res. Mol. Biol. 28, 101-142
38. Samborook, J., Fritsch, E. F., and Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual, 2nd Ed., Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
39. Golden, S. S., Brusslan, J., and Haselkorn, R. (1986)EMBO J. 5, 2789-2798
40. Shinozaki, K., and Sugiura, M. (1985) Mol. Gen. Genet. 200, 27-32
41. Sugita, M., Sugishita, H., Fujishiro, T., Tsuboi, M., Sugita, C., Endo, T., and Sugiura, M. (1997) Gene (Amst.) 195, 73-79
42. Rippka, R., Deuruelles, J., Waterbury, J. B., Herdman, M., and Stanier, R. Y. (1979) J. Gen. Microbiol. 111, 1-61
43. Sauer, J., Schreiber, U., Schmid, R., Volker, U., and Forchhammer, K. (2001) Plant Physiol. 126, 233-243
44. Tomioka, N., and Sugiura, M. (1983) Mol. Gen. Genet. 191, 46-50
45. Watanabe, T., Sugita, M., and Sugiura, M. (1998) Biochim. Biophys. Acta 1396, 97-104
46. Omata, T. (1991) Plant Cell Physiol. 32, 151-157
47. Scanlan, D. J., Newman, J., Sebaihia, M., Mann, N. H., and Carr, N. G. (1992) Plant Mol. Biol. 19, 877-880
48. Boni, I. V., Artamonova, V. S., Tzareva, N. V., and Dreyfus, M. (2001) EMBO J. 20, 4222-4232
49. Komarova, A. V., Tchufistova, L. S., Supina, E. V., and Boni, I. V. (2002) RNA (N. Y.) 8, 1137-1147