ATAB2 is a novel factor in the signalling pathway of light-controlled synthesis of photosystem proteins

EMBO Journal

Volumn 25, Issue 24, 2006, Pages 5907-5918

  Barneche, Frédy ^a,b   Winter, Veronika ^a   Crèvecœur, Michèle ^a   Rochaix, Jean David ^a  

^a UNIVERSITY OF GENEVA   (Switzerland)

^b STAZIONE ZOOLOGICA ANTON DOHRN   (Italy)

Author keywords

Arabidopsis; Chloroplast; Cryptochrome; Photosystem; RNA binding protein

Indexed keywords

ALANINE; CRYPTOCHROME; MESSENGER RNA; RNA BINDING PROTEIN; URACIL;

ALGA; ARABIDOPSIS; ARTICLE; BIOGENESIS; CHLAMYDOMONAS; CHLOROPLAST; CONTROLLED STUDY; GENE INACTIVATION; NONHUMAN; PHENOTYPE; PHOTORECEPTOR; PHOTOSYNTHESIS; PHOTOSYSTEM I; PLANT DEVELOPMENT; POLYSOME; PRIORITY JOURNAL; PROTEIN EXPRESSION; PROTEIN SYNTHESIS; SEEDLING; THYLAKOID MEMBRANE;

ANIMALS; ARABIDOPSIS; ARABIDOPSIS PROTEINS; CHLAMYDOMONAS; CHLOROPLASTS; EXONS; GENE EXPRESSION REGULATION, PLANT; LIGHT; MUTAGENESIS, INSERTIONAL; MUTANT PROTEINS; MUTATION; PHENOTYPE; PHOTORECEPTORS; PHOTOSYSTEM I PROTEIN COMPLEX; PHOTOSYSTEM II PROTEIN COMPLEX; PLANT LEAVES; PLANTS, GENETICALLY MODIFIED; POLY A-U; POLYRIBOSOMES; PROTEIN BIOSYNTHESIS; RNA, MESSENGER; RNA-BINDING PROTEINS; SEEDLING; SIGNAL TRANSDUCTION; TRANSCRIPTION, GENETIC;

ALGAE; ARABIDOPSIS; CHLAMYDOMONAS;

EID: 33845687519     PISSN: 02614189     EISSN: 14602075     Source Type: Journal    
DOI: 10.1038/sj.emboj.7601472     Document Type: Article

References (42)

1. Amann K, Lezhneva L, Wanner G, Herrmann RG, Meurer J (2004) ACCUMULATION OF PHOTOSYSTEM ONE1, a member of a novel gene family, is required for accumulation of [4Fe-4S] cluster-containing chloroplast complexes and antenna proteins. Plant Cell 16: 3084-3097
2. Andersson B, Anderson JM (1980) Lateral heterogeneity in the distribution of chlorophyll-protein complexes of the thylakoid membranes of spinach chloroplasts. Biochim Biophys Acta 593: 427-440
3. Barkan A (1988) Proteins encoded by a complex chloroplast transcription unit are each translated from both monocistronic and polycistronic mRNAs. EMBO J 7: 2637-2644
4. Barkan A (1998) Approaches to investigating nuclear genes that function in chloroplast biogenesis in land plants. Methods Enzymol 297: 38-57
5. Barkan A, Goldschmidt-Clermont M (2000) Participation of nuclear genes in chloroplast gene expression. Biochimie 82: 559-572
6. Barkan A, Walker M, Nolasco M, Johnson D (1994) A nuclear mutation in maize blocks the processing and translation of several chloroplast mRNAs and provides evidence for the differential translation of alternative mRNAs forms. EMBO J 13: 3170-3181
7. Bruick RK, Mayfield SP (1999) Light-activated translation of chloroplast mRNAs. Trends Plant Sci 4: 190-195
8. Chen M, Chory J, Fankhauser C (2004) Light signal transduction in higher plants. Annu Rev Genet 38: 87-117
9. Choquet Y, Stern DB, Wostrikoff K, Kuras R, Girard-Bascou J, Wollman F-A (1998) Translation of cytochrome f is autoregulated through the 5′ untranslated region of petA mRNA in Chlamydomonas chloroplasts. Proc Natl Acad Sci USA 95: 4380-4385
10. Choquet Y, Wollman F-A (2002) Translational regulations as specific traits of chloroplast gene expression. FEBS Lett 529: 39-42
11. Clough SJ, Bent AF (1998) Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J 16: 735-743
12. Dauvillée D, Stampacchia O, Girard-Bascou J, Rochaix JD (2003) Tab2 is a novel conserved RNA binding protein required for translation of the chloroplast psaB mRNA. EMBO J 22: 6378-6388
13. Emanuelsson O, Nielsen H, Brunak S, von Heijne G (2000) Predicting subcellular localization of proteins based on their N-terminal amino acid sequence. J Mol Biol 300: 1005-1016
14. Fisk DG, Walker MB, Barkan A (1999) Molecular cloning of the maize gene crp1 reveals similarity between regulators of mitochondrial and chloroplast gene expression. EMBO J 18: 2621-2630
15. Gyula P, Schäfer E, Nagy F (2003) Light perception and signalling in higher plants. Curr Opin Plant Biol 6: 446-452
16. Klein RR, Mason HS, Mullet JE (1988) Light-regulated translation of chloroplast proteins. I. Transcripts of PsaA-PsaB, PsbA, and RbcL are associated with polysomes in dark-grown and illuminated Barley seedlings. J Cell Biol 106: 289-301
17. Klein RR, Mullet JE (1987) Control of gene expression during higher plant chloroplast biogenesis. J Biol Chem 262: 4341-4348
18. Lezhneva L, Amann K, Meurer J (2004) The universally conserved HCF101 protein is involved in assembly of [4Fe-4S]-cluster-containing complexes in Arabidopsis thaliana chloroplasts. Plant J 37: 174-185
19. Lezhneva L, Meurer J (2004) The nuclear factor HCF145 affects chloroplast psaA-psaB-rps14 transcript abundance in Arabidopsis thaliana. Plant J 38: 740-753
20. Lin C, Yang H, Guo H, Mockler T, Chen J, Cashmore AR (1998) Enhancement of blue-light sensitivity of Arabidopsis seedlings by a blue light receptor cryptochrome 2. Proc Natl Acad Sci USA 95: 2686-2690
21. Lopez-Juez E, Pyke KA (2005) Plastids unleashed: their development and their integration in plant development. Int J Dev Biol 49: 557-577
22. Lurin C, Andrés C, Aubourg S, Bellaoui M, Bitton S, Bruyère C, Caboche M, Debast C, Gualberto J, Hoffmann B, Lecharny A, Le Ret M, Martin-Magniette M-L, Mireau H, Peeters N, Renou J-P, Szurek B, Taconnat L, Small I (2004) Genome-wide analysis of Arabidopsis pentratricopeptide repeat proteins reveals their essential role in organelle biogenesis. Plant Cell 16: 2089-2103
23. Ma L, Li J, Qu L, Hager J, Chen Z, Zhao H, Deng XW (2001) Light control of Arabidopsis development entails coordinated regulation of genome expression and cellular pathways. Plant Cell 13: 2589-2607
24. Meierhoff K, Felder S, Nakamura T, Bechtold N, Schuster G (2003) HCF152, an Arabidopsis RNA binding pentatricopeptide repeat protein involved in the processing of chloroplast psbB-psbT-psbH-petB-petD RNAs. Plant Cell 15: 1480-1495
25. Merendino L, Falciatore A, Rochaix JD (2003) Expression and RNA binding properties of the chloroplast ribosomal protein S1 from Chlamydomonas reinhardtii. Plant Mol Biol 53: 371-382
26. Meurer J, Meierhoff K, Westhoff P (1996) Isolation of high-chlorophyll-fluorescence mutants of Arabidopsis thaliana and their characterisation by spectroscopy, immunoblotting and Northern hybridisation. Planta 198: 385-396
27. Minai L, Wostrikoff K, Wollman FA, Choquet Y (2006) Chloroplast biogenesis of photosystem II cores involves a series of assembly-controlled steps that regulate translation. Plant Cell 18: 159-175
28. Mochizuki T, Onda Y, Fujiwara E, Wada M, Toyoshima Y (2004) Two independent light signals cooperate in the activation of the plastid psbD blue light-responsive promoter in Arabidopsis. FEBS Lett 571: 26-30
29. Neff MM, Chory J (1998) Genetic interactions between phytochrome A, phytochrome B, and cryptochrome 1 during Arabidopsis development. Plant Phys 118: 27-36
30. Ohgishi M, Saji K, Okada K, Sakai T (2004) Functional analysis of each blue light receptor, cry1, cry2, phot1, and phot2, by using combinatorial multiple mutants in Arabidopsis. Proc Natl Acad Sci USA 101: 2223-2228
31. Ossenbuhl F, Gohre V, Meurer J, Krieger-Liszkay A, Rochaix JD, Eichacker LA (2004) Efficient assembly of photosystem II in Chlamydomonas reinhardtii requires Alb3.1p, a homolog of Arabidopsis ALBINO3. Plant Cell 16: 1790-1800
32. Rosso MG, Li Y, Reiss B, Dekker K, Weisshaar B (2003) An Arabidopsis thaliana T-DNA mutagenized population (GABI-Kat) for flanking sequence tag-based reverse genetics. Plant Mol Biol 53: 247-259
33. Sane AP, Stein B, Westhoff P (2005) The nuclear gene HCF107 encoded a membrane-associated R-TPR (RNA tetratricopeptide repeat)-containing protein involved in expression of the plastidial psbH gene in Arabidopsis. Plant J 42: 720-730
34. Schmitz-Linneweber C, Williams-Carrier R, Barkan A (2005) RNA immunoprecipitation and microarray analysis show a chloroplast pentatricopeptide repeat protein to be associated with the 5′ region of mRNAs whose translation it activates. Plant Cell 17: 2791-2804
35. Shinomura T, Nagatani A, Hanzawa H, Kubota M, Watanabe M, Furuya M (1998) Action spectra for phytochrome A- and B-specific photoinduction of seed germination in Arabidopsis thaliana. Proc Natl Acad Sci USA 93: 8129-8133
36. Stöckel J, Oelmüller R (2004) A novel protein for photosystem I biogenesis. J Biol Chem 279: 10243-10251
37. Sullivan JA, Deng XW (2003) From seed to seed: the role of photoreceptors in Arabidopsis development. Dev Biol 260: 289-297
38. Sussman MR, Amasino RM, Young JC, Krysan PJ, Austin-Phillips S (2000) The Arabidopsis knockout facility at the University of Wisconsin-Madison. Plant Physiol 124: 1465-1467
39. Timmis JN, Ayliffe MA, Huang CY, Martin W (2004) Endosymbiotic gene transfer: organelle genomes forge eukaryotic chromosomes. Nat Rev Genet 5: 123-135
40. Tsunoyama Y, Ishizaki Y, Morikawa K, Kobori M, Nakahira Y, Takeba G, Toyoshima Y, Shiina T (2004) Blue light-induced transcription of plastid-encoded psbD gene is mediated by a nuclear-encoded transcription initiation factor, AtSig5. Proc Natl Acad Sci USA 101: 3304-3309
41. Wang H (2005) Signaling mechanisms of higher plant photoreceptors: a structure-function perspective. Curr Top Dev Biol 68: 227-261
42. Wostrikoff K, Girard-Bascou J, Wollman F-A, Choquet Y (2004) Biogenesis of PSI involves a cascade of translational autoregulation in the chloroplast of Chlamydomonas. EMBO J 23: 2696-2705