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Volumn 20, Issue 5, 2014, Pages 761-768

Microbial determinants of biochemical individuality and their impact on toxicology and pharmacology

Author keywords

[No Author keywords available]

Indexed keywords

ANTIBIOTIC AGENT; ANTIDIABETIC AGENT; ANTIOXIDANT; CARCINOGEN; CARDIAC GLYCOSIDE; DIGOXIN; FARNESOID X RECEPTOR; FATTY ACID; HIPPURIC ACID; HYDROXYMETHYLGLUTARYL COENZYME A REDUCTASE INHIBITOR; LOW DENSITY LIPOPROTEIN CHOLESTEROL; METFORMIN; OLANZAPINE; PARA CRESOL; PHENYLACETYLGLUTAMINE; RNA 16S; SIMVASTATIN; TEMPOL; TOXIN; UNCLASSIFIED DRUG; XENOBIOTIC AGENT; DRUG;

EID: 84910122098     PISSN: 15504131     EISSN: 19327420     Source Type: Journal    
DOI: 10.1016/j.cmet.2014.07.002     Document Type: Review
Times cited : (49)

References (87)
  • 6
    • 84907487928 scopus 로고    scopus 로고
    • Host-microbial interactions in the metabolism of therapeutic and diet-derived xenobiotics
    • in press
    • R.N. Carmody, and P.J. Turnbaugh Host-microbial interactions in the metabolism of therapeutic and diet-derived xenobiotics J. Clin. Invest. 2014 in press
    • (2014) J. Clin. Invest.
    • Carmody, R.N.1    Turnbaugh, P.J.2
  • 8
    • 70149096873 scopus 로고    scopus 로고
    • Pharmacometabonomic identification of a significant host-microbiome metabolic interaction affecting human drug metabolism
    • T.A. Clayton, D. Baker, J.C. Lindon, J.R. Everett, and J.K. Nicholson Pharmacometabonomic identification of a significant host-microbiome metabolic interaction affecting human drug metabolism Proc. Natl. Acad. Sci. USA 106 2009 14728 14733
    • (2009) Proc. Natl. Acad. Sci. USA , vol.106 , pp. 14728-14733
    • Clayton, T.A.1    Baker, D.2    Lindon, J.C.3    Everett, J.R.4    Nicholson, J.K.5
  • 9
    • 84862276328 scopus 로고    scopus 로고
    • Structure, function and diversity of the healthy human microbiome
    • Human Microbiome Project Consortium
    • T.H.M.P. Consortium Human Microbiome Project Consortium Structure, function and diversity of the healthy human microbiome Nature 486 2012 207 214
    • (2012) Nature , vol.486 , pp. 207-214
    • Consortium, T.H.M.P.1
  • 10
    • 84885135911 scopus 로고    scopus 로고
    • Antipsychotics and the gut microbiome: Olanzapine-induced metabolic dysfunction is attenuated by antibiotic administration in the rat
    • K.J. Davey, P.D. Cotter, O. O'Sullivan, F. Crispie, T.G. Dinan, J.F. Cryan, and S.M. O'Mahony Antipsychotics and the gut microbiome: olanzapine-induced metabolic dysfunction is attenuated by antibiotic administration in the rat Transcult. Psychiatry 3 2013 e309
    • (2013) Transcult. Psychiatry , vol.3 , pp. 309
    • Davey, K.J.1    Cotter, P.D.2    O'Sullivan, O.3    Crispie, F.4    Dinan, T.G.5    Cryan, J.F.6    O'Mahony, S.M.7
  • 12
    • 0024507744 scopus 로고
    • Phylogenetic stains: Ribosomal RNA-based probes for the identification of single cells
    • E.F. DeLong, G.S. Wickham, and N.R. Pace Phylogenetic stains: ribosomal RNA-based probes for the identification of single cells Science 243 1989 1360 1363
    • (1989) Science , vol.243 , pp. 1360-1363
    • Delong, E.F.1    Wickham, G.S.2    Pace, N.R.3
  • 13
    • 79952756960 scopus 로고    scopus 로고
    • Incomplete recovery and individualized responses of the human distal gut microbiota to repeated antibiotic perturbation
    • L. Dethlefsen, and D.A. Relman Incomplete recovery and individualized responses of the human distal gut microbiota to repeated antibiotic perturbation Proc. Natl. Acad. Sci. USA 108 Suppl 1 2011 4554 4561
    • (2011) Proc. Natl. Acad. Sci. USA , vol.108 , pp. 4554-4561
    • Dethlefsen, L.1    Relman, D.A.2
  • 14
    • 84900535804 scopus 로고    scopus 로고
    • Dynamics and associations of microbial community types across the human body
    • T. Ding, and P.D. Schloss Dynamics and associations of microbial community types across the human body Nature 509 2014 357 360
    • (2014) Nature , vol.509 , pp. 357-360
    • Ding, T.1    Schloss, P.D.2
  • 18
    • 84860846336 scopus 로고    scopus 로고
    • Toxicological significance of azo dye metabolism by human intestinal microbiota
    • J. Feng, C.E. Cerniglia, and H. Chen Toxicological significance of azo dye metabolism by human intestinal microbiota Front Biosci (Elite Ed) 4 2012 568 586
    • (2012) Front Biosci (Elite Ed) , vol.4 , pp. 568-586
    • Feng, J.1    Cerniglia, C.E.2    Chen, H.3
  • 23
    • 84856011484 scopus 로고    scopus 로고
    • Metagenomic systems biology of the human gut microbiome reveals topological shifts associated with obesity and inflammatory bowel disease
    • S. Greenblum, P.J. Turnbaugh, and E. Borenstein Metagenomic systems biology of the human gut microbiome reveals topological shifts associated with obesity and inflammatory bowel disease Proc. Natl. Acad. Sci. USA 109 2012 594 599
    • (2012) Proc. Natl. Acad. Sci. USA , vol.109 , pp. 594-599
    • Greenblum, S.1    Turnbaugh, P.J.2    Borenstein, E.3
  • 24
    • 84861964370 scopus 로고    scopus 로고
    • Is it time for a metagenomic basis of therapeutics?
    • H.J. Haiser, and P.J. Turnbaugh Is it time for a metagenomic basis of therapeutics? Science 336 2012 1253 1255
    • (2012) Science , vol.336 , pp. 1253-1255
    • Haiser, H.J.1    Turnbaugh, P.J.2
  • 25
    • 84873728735 scopus 로고    scopus 로고
    • Developing a metagenomic view of xenobiotic metabolism
    • H.J. Haiser, and P.J. Turnbaugh Developing a metagenomic view of xenobiotic metabolism Pharmacol. Res. 69 2013 21 31
    • (2013) Pharmacol. Res. , vol.69 , pp. 21-31
    • Haiser, H.J.1    Turnbaugh, P.J.2
  • 26
    • 84880439384 scopus 로고    scopus 로고
    • Predicting and manipulating cardiac drug inactivation by the human gut bacterium Eggerthella lenta
    • H.J. Haiser, D.B. Gootenberg, K. Chatman, G. Sirasani, E.P. Balskus, and P.J. Turnbaugh Predicting and manipulating cardiac drug inactivation by the human gut bacterium Eggerthella lenta Science 341 2013 295 298
    • (2013) Science , vol.341 , pp. 295-298
    • Haiser, H.J.1    Gootenberg, D.B.2    Chatman, K.3    Sirasani, G.4    Balskus, E.P.5    Turnbaugh, P.J.6
  • 27
    • 84899456016 scopus 로고    scopus 로고
    • Mechanistic insight into digoxin inactivation by Eggerthella lenta augments our understanding of its pharmacokinetics
    • H.J. Haiser, K.L. Seim, E.P. Balskus, and P.J. Turnbaugh Mechanistic insight into digoxin inactivation by Eggerthella lenta augments our understanding of its pharmacokinetics Gut Microbes 5 2014 233 238
    • (2014) Gut Microbes , vol.5 , pp. 233-238
    • Haiser, H.J.1    Seim, K.L.2    Balskus, E.P.3    Turnbaugh, P.J.4
  • 28
    • 77950847866 scopus 로고    scopus 로고
    • Transfer of carbohydrate-active enzymes from marine bacteria to Japanese gut microbiota
    • J.H. Hehemann, G. Correc, T. Barbeyron, W. Helbert, M. Czjzek, and G. Michel Transfer of carbohydrate-active enzymes from marine bacteria to Japanese gut microbiota Nature 464 2010 908 912
    • (2010) Nature , vol.464 , pp. 908-912
    • Hehemann, J.H.1    Correc, G.2    Barbeyron, T.3    Helbert, W.4    Czjzek, M.5    Michel, G.6
  • 29
    • 84870351198 scopus 로고    scopus 로고
    • Bacteria of the human gut microbiome catabolize red seaweed glycans with carbohydrate-active enzyme updates from extrinsic microbes
    • J.H. Hehemann, A.G. Kelly, N.A. Pudlo, E.C. Martens, and A.B. Boraston Bacteria of the human gut microbiome catabolize red seaweed glycans with carbohydrate-active enzyme updates from extrinsic microbes Proc. Natl. Acad. Sci. USA 109 2012 19786 19791
    • (2012) Proc. Natl. Acad. Sci. USA , vol.109 , pp. 19786-19791
    • Hehemann, J.H.1    Kelly, A.G.2    Pudlo, N.A.3    Martens, E.C.4    Boraston, A.B.5
  • 31
    • 84862173705 scopus 로고    scopus 로고
    • A core human microbiome as viewed through 16S rRNA sequence clusters
    • S.M. Huse, Y. Ye, Y. Zhou, and A.A. Fodor A core human microbiome as viewed through 16S rRNA sequence clusters PLoS ONE 7 2012 e34242
    • (2012) PLoS ONE , vol.7 , pp. 34242
    • Huse, S.M.1    Ye, Y.2    Zhou, Y.3    Fodor, A.A.4
  • 39
    • 84873510063 scopus 로고    scopus 로고
    • A guide to enterotypes across the human body: Meta-analysis of microbial community structures in human microbiome datasets
    • O. Koren, D. Knights, A. Gonzalez, L. Waldron, N. Segata, R. Knight, C. Huttenhower, and R.E. Ley A guide to enterotypes across the human body: meta-analysis of microbial community structures in human microbiome datasets PLoS Comput. Biol. 9 2013 e1002863
    • (2013) PLoS Comput. Biol. , vol.9 , pp. 1002863
    • Koren, O.1    Knights, D.2    Gonzalez, A.3    Waldron, L.4    Segata, N.5    Knight, R.6    Huttenhower, C.7    Ley, R.E.8
  • 47
    • 84859987078 scopus 로고    scopus 로고
    • Pharmacologic targeting of bacterial β-glucuronidase alleviates nonsteroidal anti-inflammatory drug-induced enteropathy in mice
    • A. LoGuidice, B.D. Wallace, L. Bendel, M.R. Redinbo, and U.A. Boelsterli Pharmacologic targeting of bacterial β-glucuronidase alleviates nonsteroidal anti-inflammatory drug-induced enteropathy in mice J. Pharmacol. Exp. Ther. 341 2012 447 454
    • (2012) J. Pharmacol. Exp. Ther. , vol.341 , pp. 447-454
    • Loguidice, A.1    Wallace, B.D.2    Bendel, L.3    Redinbo, M.R.4    Boelsterli, U.A.5
  • 50
    • 79955768389 scopus 로고    scopus 로고
    • Pharmacogenetics, pharmacogenomics, and individualized medicine
    • Q. Ma, and A.Y. Lu Pharmacogenetics, pharmacogenomics, and individualized medicine Pharmacol. Rev. 63 2011 437 459
    • (2011) Pharmacol. Rev. , vol.63 , pp. 437-459
    • Ma, Q.1    Lu, A.Y.2
  • 51
    • 0035430951 scopus 로고    scopus 로고
    • Bile salt hydrolase activity and resistance to toxicity of conjugated bile salts are unrelated properties in lactobacilli
    • S.A. Moser, and D.C. Savage Bile salt hydrolase activity and resistance to toxicity of conjugated bile salts are unrelated properties in lactobacilli Appl. Environ. Microbiol. 67 2001 3476 3480
    • (2001) Appl. Environ. Microbiol. , vol.67 , pp. 3476-3480
    • Moser, S.A.1    Savage, D.C.2
  • 52
    • 0035000044 scopus 로고    scopus 로고
    • Xenobiotic metabolism: A look from the past to the future
    • P.J. Murphy Xenobiotic metabolism: a look from the past to the future Drug Metab. Dispos. 29 2001 779 780
    • (2001) Drug Metab. Dispos. , vol.29 , pp. 779-780
    • Murphy, P.J.1
  • 53
    • 14844344472 scopus 로고    scopus 로고
    • Metabolic risk during antipsychotic treatment
    • J.W. Newcomer Metabolic risk during antipsychotic treatment Clin. Ther. 26 2004 1936 1946
    • (2004) Clin. Ther. , vol.26 , pp. 1936-1946
    • Newcomer, J.W.1
  • 54
    • 84877249773 scopus 로고    scopus 로고
    • Medicines from microbiota
    • B. Olle Medicines from microbiota Nat. Biotechnol. 31 2013 309 315
    • (2013) Nat. Biotechnol. , vol.31 , pp. 309-315
    • Olle, B.1
  • 59
    • 84890452868 scopus 로고    scopus 로고
    • Bacterial β-glucuronidase inhibition protects mice against enteropathy induced by indomethacin, ketoprofen or diclofenac: Mode of action and pharmacokinetics
    • K.S. Saitta, C. Zhang, K.K. Lee, K. Fujimoto, M.R. Redinbo, and U.A. Boelsterli Bacterial β-glucuronidase inhibition protects mice against enteropathy induced by indomethacin, ketoprofen or diclofenac: mode of action and pharmacokinetics Xenobiotica 44 2014 28 35
    • (2014) Xenobiotica , vol.44 , pp. 28-35
    • Saitta, K.S.1    Zhang, C.2    Lee, K.K.3    Fujimoto, K.4    Redinbo, M.R.5    Boelsterli, U.A.6
  • 62
    • 0015757745 scopus 로고
    • Metabolism of foreign compounds by gastrointestinal microorganisms
    • R.R. Scheline Metabolism of foreign compounds by gastrointestinal microorganisms Pharmacol. Rev. 25 1973 451 523
    • (1973) Pharmacol. Rev. , vol.25 , pp. 451-523
    • Scheline, R.R.1
  • 64
    • 0037805644 scopus 로고    scopus 로고
    • Biotechnological prospects from metagenomics
    • P.D. Schloss, and J. Handelsman Biotechnological prospects from metagenomics Curr. Opin. Biotechnol. 14 2003 303 310
    • (2003) Curr. Opin. Biotechnol. , vol.14 , pp. 303-310
    • Schloss, P.D.1    Handelsman, J.2
  • 65
    • 84897960120 scopus 로고    scopus 로고
    • An increase in the Akkermansia spp. Population induced by metformin treatment improves glucose homeostasis in diet-induced obese mice
    • N.R. Shin, J.C. Lee, H.Y. Lee, M.S. Kim, T.W. Whon, M.S. Lee, and J.W. Bae An increase in the Akkermansia spp. population induced by metformin treatment improves glucose homeostasis in diet-induced obese mice Gut 63 2014 727 735
    • (2014) Gut , vol.63 , pp. 727-735
    • Shin, N.R.1    Lee, J.C.2    Lee, H.Y.3    Kim, M.S.4    Whon, T.W.5    Lee, M.S.6    Bae, J.W.7
  • 66
    • 83055186603 scopus 로고    scopus 로고
    • Ecology drives a global network of gene exchange connecting the human microbiome
    • C.S. Smillie, M.B. Smith, J. Friedman, O.X. Cordero, L.A. David, and E.J. Alm Ecology drives a global network of gene exchange connecting the human microbiome Nature 480 2011 241 244
    • (2011) Nature , vol.480 , pp. 241-244
    • Smillie, C.S.1    Smith, M.B.2    Friedman, J.3    Cordero, O.X.4    David, L.A.5    Alm, E.J.6
  • 68
    • 84857726895 scopus 로고    scopus 로고
    • Do interactions between gut ecology and environmental chemicals contribute to obesity and diabetes?
    • S.M. Snedeker, and A.G. Hay Do interactions between gut ecology and environmental chemicals contribute to obesity and diabetes? Environ. Health Perspect. 120 2012 332 339
    • (2012) Environ. Health Perspect. , vol.120 , pp. 332-339
    • Snedeker, S.M.1    Hay, A.G.2
  • 73
    • 33845874101 scopus 로고    scopus 로고
    • An obesity-associated gut microbiome with increased capacity for energy harvest
    • P.J. Turnbaugh, R.E. Ley, M.A. Mahowald, V. Magrini, E.R. Mardis, and J.I. Gordon An obesity-associated gut microbiome with increased capacity for energy harvest Nature 444 2006 1027 1031
    • (2006) Nature , vol.444 , pp. 1027-1031
    • Turnbaugh, P.J.1    Ley, R.E.2    Mahowald, M.A.3    Magrini, V.4    Mardis, E.R.5    Gordon, J.I.6
  • 82
    • 84855604875 scopus 로고    scopus 로고
    • Quantitative UPLC-MS/MS analysis of the gut microbial co-metabolites phenylacetylglutamine, 4-cresyl sulphate and hippurate in human urine: INTERMAP Study
    • A. Wijeyesekera, P.A. Clarke, M. Bictash, I.J. Brown, M. Fidock, T. Ryckmans, I.K. Yap, Q. Chan, J. Stamler, and P. Elliott Quantitative UPLC-MS/MS analysis of the gut microbial co-metabolites phenylacetylglutamine, 4-cresyl sulphate and hippurate in human urine: INTERMAP Study Anal. Methods 4 2012 65 72
    • (2012) Anal. Methods , vol.4 , pp. 65-72
    • Wijeyesekera, A.1    Clarke, P.A.2    Bictash, M.3    Brown, I.J.4    Fidock, M.5    Ryckmans, T.6    Yap, I.K.7    Chan, Q.8    Stamler, J.9    Elliott, P.10
  • 84
    • 33847151750 scopus 로고    scopus 로고
    • The antibiotic resistome: The nexus of chemical and genetic diversity
    • G.D. Wright The antibiotic resistome: the nexus of chemical and genetic diversity Nat. Rev. Microbiol. 5 2007 175 186
    • (2007) Nat. Rev. Microbiol. , vol.5 , pp. 175-186
    • Wright, G.D.1
  • 87
    • 0031684010 scopus 로고    scopus 로고
    • Temperature gradient gel electrophoresis analysis of 16S rRNA from human fecal samples reveals stable and host-specific communities of active bacteria
    • E.G. Zoetendal, A.D. Akkermans, and W.M. De Vos Temperature gradient gel electrophoresis analysis of 16S rRNA from human fecal samples reveals stable and host-specific communities of active bacteria Appl. Environ. Microbiol. 64 1998 3854 3859
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 3854-3859
    • Zoetendal, E.G.1    Akkermans, A.D.2    De Vos, W.M.3


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