-
2
-
-
84879369738
-
Commensal bacteria at the interface of host metabolism and the immune system
-
Brestoff JR, Artis D. 2013. Commensal bacteria at the interface of host metabolism and the immune system. Nat Immunol 14:676-684.
-
(2013)
Nat Immunol
, vol.14
, pp. 676-684
-
-
Brestoff, J.R.1
Artis, D.2
-
3
-
-
84865477413
-
Antibiotics in early life alter the murine colonic microbiome and adiposity
-
Cho I, Yamanishi S, Cox L, Methe BA, Zavadil J, Li K, et al. 2012. Antibiotics in early life alter the murine colonic microbiome and adiposity. Nature 488:621-626.
-
(2012)
Nature
, vol.488
, pp. 621-626
-
-
Cho, I.1
Yamanishi, S.2
Cox, L.3
Methe, B.A.4
Zavadil, J.5
Li, K.6
-
4
-
-
84878458134
-
Exercise attenuates PCB-induced changes in the mouse gut microbiome
-
doi:10.1289/ehp.1306534
-
Choi JJ, Eum SY, Rampersaud E, Daunert S, Abreu MT, Toborek M. 2013. Exercise attenuates PCB-induced changes in the mouse gut microbiome. Environ Health Perspect 121:725-730; doi:10.1289/ehp.1306534.
-
(2013)
Environ Health Perspect
, vol.121
, pp. 725-730
-
-
Choi, J.J.1
Eum, S.Y.2
Rampersaud, E.3
Daunert, S.4
Abreu, M.T.5
Toborek, M.6
-
5
-
-
79956075540
-
Colonization-induced host-gut microbial metabolic interaction
-
doi:10.1128/mBio.00271-10 e00271-10
-
Claus SP, Ellero SL, Berger B, Krause L, Bruttin A, Molina J, et al. 2011. Colonization-induced host-gut microbial metabolic interaction. MBio 2:e00271-10; doi:10.1128/mBio.00271-10.
-
(2011)
MBio
, vol.2
-
-
Claus, S.P.1
Ellero, S.L.2
Berger, B.3
Krause, L.4
Bruttin, A.5
Molina, J.6
-
6
-
-
79952601424
-
Normal gut microbiota modulates brain development and behavior
-
Diaz HR, Wang S, Anuar F, Qian Y, Bjorkholm B, Samuelsson A, et al. 2011. Normal gut microbiota modulates brain development and behavior. Proc Natl Acad Sci USA 108:3047-3052.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 3047-3052
-
-
Diaz, H.R.1
Wang, S.2
Anuar, F.3
Qian, Y.4
Bjorkholm, B.5
Samuelsson, A.6
-
7
-
-
79955579989
-
The microbiome and butyrate regulate energy metabolism and autophagy in the mammalian colon
-
Donohoe DR, Garge N, Zhang X, Sun W, O'Connell TM, Bunger MK, et al. 2011. The microbiome and butyrate regulate energy metabolism and autophagy in the mammalian colon. Cell Metab 13:517-526.
-
(2011)
Cell Metab
, vol.13
, pp. 517-526
-
-
Donohoe, D.R.1
Garge, N.2
Zhang, X.3
Sun, W.4
O'Connell, T.M.5
Bunger, M.K.6
-
8
-
-
79959894418
-
Understanding the role of gut microbiome-host metabolic signal disruption in health and disease
-
Holmes E, Li JV, Athanasiou T, Ashrafian H, Nicholson JK. 2011. Understanding the role of gut microbiome-host metabolic signal disruption in health and disease. Trends Microbiol 19:349-359.
-
(2011)
Trends Microbiol
, vol.19
, pp. 349-359
-
-
Holmes, E.1
Li, J.V.2
Athanasiou, T.3
Ashrafian, H.4
Nicholson, J.K.5
-
9
-
-
84873387695
-
Association between arsenic suppression of adipogenesis and induction of CHOP10 via the endoplasmic reticulum stress response
-
doi:10.1289/ehp.1205731
-
Hou Y, Xue P, Woods CG, Wang X, Fu J, Yarborough K, et al. 2012. Association between arsenic suppression of adipogenesis and induction of CHOP10 via the endoplasmic reticulum stress response. Environ Health Perspect 121:237-243; doi:10.1289/ehp.1205731.
-
(2012)
Environ Health Perspect
, vol.121
, pp. 237-243
-
-
Hou, Y.1
Xue, P.2
Woods, C.G.3
Wang, X.4
Fu, J.5
Yarborough, K.6
-
10
-
-
80052798438
-
Arsenic exposure and toxicology: A historical perspective
-
Hughes MF, Beck BD, Chen Y, Lewis AS, Thomas DJ. 2011. Arsenic exposure and toxicology: a historical perspective. Toxicol Sci 123:305-332.
-
(2011)
Toxicol Sci
, vol.123
, pp. 305-332
-
-
Hughes, M.F.1
Beck, B.D.2
Chen, Y.3
Lewis, A.S.4
Thomas, D.J.5
-
11
-
-
0034544829
-
Isolation of human intestinal bacteria metabolizing the natural isoflavone glycosides daidzin and genistin
-
Hur HG, Lay JO Jr, Beger RD, Freeman JP, Rafii F. 2000. Isolation of human intestinal bacteria metabolizing the natural isoflavone glycosides daidzin and genistin. Arch Microbiol 174:422-428.
-
(2000)
Arch Microbiol
, vol.174
, pp. 422-428
-
-
Hur, H.G.1
Lay Jr., J.O.2
Beger, R.D.3
Freeman, J.P.4
Rafii, F.5
-
12
-
-
51649086648
-
Functional and comparative metagenomic analysis of bile salt hydrolase activity in the human gut microbiome
-
Jones BV, Begley M, Hill C, Gahan CG, Marchesi JR. 2008. Functional and comparative metagenomic analysis of bile salt hydrolase activity in the human gut microbiome. Proc Natl Acad Sci USA 105:13580-13585.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 13580-13585
-
-
Jones, B.V.1
Begley, M.2
Hill, C.3
Gahan, C.G.4
Marchesi, J.R.5
-
13
-
-
84858983547
-
KEGG for integration and interpretation of large-scale molecular data sets
-
Kanehisa M, Goto S, Sato Y, Furumichi M, Tanabe M. 2012. KEGG for integration and interpretation of large-scale molecular data sets. Nucleic Acids Res 40:D109-D114.
-
(2012)
Nucleic Acids Res
, vol.40
-
-
Kanehisa, M.1
Goto, S.2
Sato, Y.3
Furumichi, M.4
Tanabe, M.5
-
14
-
-
69949096644
-
Low-dose arsenic compromises the immune response to influenza A infection in vivo
-
doi:10.1289/ehp.0900911
-
Kozul CD, Ely KH, Enelow RI, Hamilton JW. 2009. Low-dose arsenic compromises the immune response to influenza A infection in vivo. Environ Health Perspect 117:1441-1447; doi:10.1289/ehp.0900911.
-
(2009)
Environ Health Perspect
, vol.117
, pp. 1441-1447
-
-
Kozul, C.D.1
Ely, K.H.2
Enelow, R.I.3
Hamilton, J.W.4
-
15
-
-
23344442120
-
Obesity alters gut microbial ecology
-
Ley RE, Backhed F, Turnbaugh P, Lozupone CA, Knight RD, Gordon JI. 2005. Obesity alters gut microbial ecology. Proc Natl Acad Sci USA 102:11070-11075.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 11070-11075
-
-
Ley, R.E.1
Backhed, F.2
Turnbaugh, P.3
Lozupone, C.A.4
Knight, R.D.5
Gordon, J.I.6
-
16
-
-
32944466887
-
Ecological and evolutionary forces shaping microbial diversity in the human intestine
-
Ley RE, Peterson DA, Gordon JI. 2006. Ecological and evolutionary forces shaping microbial diversity in the human intestine. Cell 124:837-848.
-
(2006)
Cell
, vol.124
, pp. 837-848
-
-
Ley, R.E.1
Peterson, D.A.2
Gordon, J.I.3
-
17
-
-
0031030477
-
Phylogeny of mercury resistance (mer) operons of gram-negative bacteria isolated from the fecal flora of primates
-
Liebert CA, Wireman J, Smith T, Summers AO. 1997. Phylogeny of mercury resistance (mer) operons of gram-negative bacteria isolated from the fecal flora of primates. Appl Environ Microbiol 63:1066-1076.
-
(1997)
Appl Environ Microbiol
, vol.63
, pp. 1066-1076
-
-
Liebert, C.A.1
Wireman, J.2
Smith, T.3
Summers, A.O.4
-
18
-
-
84867459282
-
Serum metabolomics in a Helicobacter hepaticus mouse model of inflammatory bowel disease reveal important changes in the microbiome, serum peptides, and intermediary metabolism
-
Lu K, Knutson CG, Wishnok JS, Fox JG, Tannenbaum SR. 2012. Serum metabolomics in a Helicobacter hepaticus mouse model of inflammatory bowel disease reveal important changes in the microbiome, serum peptides, and intermediary metabolism. J Proteome Res 11:4916-4926.
-
(2012)
J Proteome Res
, vol.11
, pp. 4916-4926
-
-
Lu, K.1
Knutson, C.G.2
Wishnok, J.S.3
Fox, J.G.4
Tannenbaum, S.R.5
-
19
-
-
84872535919
-
Xenobiotics shape the physiology and gene expression of the active human gut microbiome
-
Maurice CF, Haiser HJ, Turnbaugh PJ. 2013. Xenobiotics shape the physiology and gene expression of the active human gut microbiome. Cell 152:39-50.
-
(2013)
Cell
, vol.152
, pp. 39-50
-
-
Maurice, C.F.1
Haiser, H.J.2
Turnbaugh, P.J.3
-
20
-
-
55049094158
-
Bile acids and signal transduction: Role in glucose homeostasis
-
Nguyen A, Bouscarel B. 2008. Bile acids and signal transduction: role in glucose homeostasis. Cell Signal 20:2180-2197.
-
(2008)
Cell Signal
, vol.20
, pp. 2180-2197
-
-
Nguyen, A.1
Bouscarel, B.2
-
21
-
-
34547129847
-
Development of the human infant intestinal microbiota
-
doi:10.1371/journal.pbio.0050177
-
Palmer C, Bik EM, DiGiulio DB, Relman DA, Brown PO. 2007. Development of the human infant intestinal microbiota. PLoS Biol 5:e177; doi:10.1371/journal.pbio.0050177.
-
(2007)
PLoS Biol
, vol.5
-
-
Palmer, C.1
Bik, E.M.2
DiGiulio, D.B.3
Relman, D.A.4
Brown, P.O.5
-
22
-
-
79961042043
-
Characterization of the impaired glucose homeostasis produced in C57BL/6 mice by chronic exposure to arsenic and high-fat diet
-
doi:10.1289/ehp.1003324
-
Paul DS, Walton FS, Saunders RJ, Styblo M. 2011. Characterization of the impaired glucose homeostasis produced in C57BL/6 mice by chronic exposure to arsenic and high-fat diet. Environ Health Perspect 119:1104-1109; doi:10.1289/ehp.1003324.
-
(2011)
Environ Health Perspect
, vol.119
, pp. 1104-1109
-
-
Paul, D.S.1
Walton, F.S.2
Saunders, R.J.3
Styblo, M.4
-
23
-
-
79954538877
-
Preabsorptive metabolism of sodium arsenate by anaerobic microbiota of mouse cecum forms a variety of methylated and thiolated arsenicals
-
Pinyayev TS, Kohan MJ, Herbin-Davis K, Creed JT, Thomas DJ. 2011. Preabsorptive metabolism of sodium arsenate by anaerobic microbiota of mouse cecum forms a variety of methylated and thiolated arsenicals. Chem Res Toxicol 24:475-477.
-
(2011)
Chem Res Toxicol
, vol.24
, pp. 475-477
-
-
Pinyayev, T.S.1
Kohan, M.J.2
Herbin-Davis, K.3
Creed, J.T.4
Thomas, D.J.5
-
24
-
-
84867074831
-
A metagenome-wide association study of gut microbiota in type 2 diabetes
-
Qin J, Li Y, Cai Z, Li S, Zhu J, Zhang F, et al. 2012. A metagenome-wide association study of gut microbiota in type 2 diabetes. Nature 490:55-60.
-
(2012)
Nature
, vol.490
, pp. 55-60
-
-
Qin, J.1
Li, Y.2
Cai, Z.3
Li, S.4
Zhu, J.5
Zhang, F.6
-
25
-
-
78751495821
-
An emerging role for epigenetic dysregulation in arsenic toxicity and carcinogenesis
-
doi:10.1289/ehp.1002114
-
Ren X, McHale CM, Skibola CF, Smith AH, Smith MT, Zhang L. 2011. An emerging role for epigenetic dysregulation in arsenic toxicity and carcinogenesis. Environ Health Perspect 119:11-19; doi:10.1289/ehp.1002114.
-
(2011)
Environ Health Perspect
, vol.119
, pp. 11-19
-
-
Ren, X.1
McHale, C.M.2
Skibola, C.F.3
Smith, A.H.4
Smith, M.T.5
Zhang, L.6
-
26
-
-
33845864967
-
Adipocytes as regulators of energy balance and glucose homeostasis
-
Rosen ED, Spiegelman BM. 2006. Adipocytes as regulators of energy balance and glucose homeostasis. Nature 444:847-853.
-
(2006)
Nature
, vol.444
, pp. 847-853
-
-
Rosen, E.D.1
Spiegelman, B.M.2
-
27
-
-
79951831638
-
Epigenetic changes in individuals with arsenicosis
-
Smeester L, Rager JE, Bailey KA, Guan X, Smith N, Garcia-Vargas G, et al. 2011. Epigenetic changes in individuals with arsenicosis. Chem Res Toxicol 24:165-167.
-
(2011)
Chem Res Toxicol
, vol.24
, pp. 165-167
-
-
Smeester, L.1
Rager, J.E.2
Bailey, K.A.3
Guan, X.4
Smith, N.5
Garcia-Vargas, G.6
-
28
-
-
79952749979
-
Systemic gut microbial modulation of bile acid metabolism in host tissue compartments
-
Swann JR, Want EJ, Geier FM, Spagou K, Wilson ID, Sidaway JE, et al. 2011. Systemic gut microbial modulation of bile acid metabolism in host tissue compartments. Proc Natl Acad Sci USA 108(suppl 1):4523-4530.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, Issue.SUPPL. 1
, pp. 4523-4530
-
-
Swann, J.R.1
Want, E.J.2
Geier, F.M.3
Spagou, K.4
Wilson, I.D.5
Sidaway, J.E.6
-
29
-
-
84866168894
-
Functional interactions between the gut microbiota and host metabolism
-
Tremaroli V, Backhed F. 2012. Functional interactions between the gut microbiota and host metabolism. Nature 489:242-249.
-
(2012)
Nature
, vol.489
, pp. 242-249
-
-
Tremaroli, V.1
Backhed, F.2
-
30
-
-
33845874101
-
An obesity-associated gut microbiome with increased capacity for energy harvest
-
Turnbaugh PJ, Ley RE, Mahowald MA, Magrini V, Mardis ER, Gordon JI. 2006. An obesity-associated gut microbiome with increased capacity for energy harvest. Nature 444:1027-1031.
-
(2006)
Nature
, vol.444
, pp. 1027-1031
-
-
Turnbaugh, P.J.1
Ley, R.E.2
Mahowald, M.A.3
Magrini, V.4
Mardis, E.R.5
Gordon, J.I.6
-
31
-
-
77954852151
-
Arsenic metabolism by human gut microbiota upon in vitro digestion of contaminated soils
-
doi:10.1289/ehp.0901794
-
Van de Wiele T, Gallawa CM, Kubachka KM, Creed JT, Basta N, Dayton EA, et al. 2010. Arsenic metabolism by human gut microbiota upon in vitro digestion of contaminated soils. Environ Health Perspect 118:1004-1009; doi:10.1289/ehp.0901794.
-
(2010)
Environ Health Perspect
, vol.118
, pp. 1004-1009
-
-
Van de Wiele, T.1
Gallawa, C.M.2
Kubachka, K.M.3
Creed, J.T.4
Basta, N.5
Dayton, E.A.6
-
32
-
-
12744273189
-
Human colon microbiota transform polycyclic aromatic hydrocarbons to estrogenic metabolites
-
doi:10.1289/ehp.7259
-
Van de Wiele T, Vanhaecke L, Boeckaert C, Peru K, Headley J, Verstraete W, et al. 2005. Human colon microbiota transform polycyclic aromatic hydrocarbons to estrogenic metabolites. Environ Health Perspect 113:6-10; doi:10.1289/ehp.7259.
-
(2005)
Environ Health Perspect
, vol.113
, pp. 6-10
-
-
Van de Wiele, T.1
Vanhaecke, L.2
Boeckaert, C.3
Peru, K.4
Headley, J.5
Verstraete, W.6
-
33
-
-
79955907495
-
Molecular mechanisms of human lipodystrophies: From adipocyte lipid droplet to oxidative stress and lipotoxicity
-
Vigouroux C, Caron-Debarle M, Le DC, Magre J, Capeau J. 2011. Molecular mechanisms of human lipodystrophies: from adipocyte lipid droplet to oxidative stress and lipotoxicity. Int J Biochem Cell Biol 43:862-876.
-
(2011)
Int J Biochem Cell Biol
, vol.43
, pp. 862-876
-
-
Vigouroux, C.1
Caron-Debarle, M.2
Le, D.C.3
Magre, J.4
Capeau, J.5
-
34
-
-
79953733693
-
Gut flora metabolism of phosphatidylcholine promotes cardiovascular disease
-
Wang Z, Klipfell E, Bennett BJ, Koeth R, Levison BS, Dugar B, et al. 2011. Gut flora metabolism of phosphatidylcholine promotes cardiovascular disease. Nature 472:57-63.
-
(2011)
Nature
, vol.472
, pp. 57-63
-
-
Wang, Z.1
Klipfell, E.2
Bennett, B.J.3
Koeth, R.4
Levison, B.S.5
Dugar, B.6
-
35
-
-
33845503040
-
Rapid onset of ulcerative typhlocolitis in B6.129P2-IL10tm1Cgn (IL-10-/-) mice infected with Helicobacter trogontum is associated with decreased colonization by altered Schaedler's flora
-
Whary MT, Danon SJ, Feng Y, Ge Z, Sundina N, Ng V, et al. 2006. Rapid onset of ulcerative typhlocolitis in B6.129P2-IL10tm1Cgn (IL-10-/-) mice infected with Helicobacter trogontum is associated with decreased colonization by altered Schaedler's flora. Infect Immun 74:6615-6623.
-
(2006)
Infect Immun
, vol.74
, pp. 6615-6623
-
-
Whary, M.T.1
Danon, S.J.2
Feng, Y.3
Ge, Z.4
Sundina, N.5
Ng, V.6
-
36
-
-
66249145772
-
Statistical methods for detecting differentially abundant features in clinical metagenomic samples
-
doi:10.1371/journal.pcbi.1000352
-
White JR, Nagarajan N, Pop M. 2009. Statistical methods for detecting differentially abundant features in clinical metagenomic samples. PLoS Comput Biol 5:e1000352; doi:10.1371/journal.pcbi.1000352.
-
(2009)
PLoS Comput Biol
, vol.5
-
-
White, J.R.1
Nagarajan, N.2
Pop, M.3
-
37
-
-
62649151803
-
Metabolomics analysis reveals large effects of gut microflora on mammalian blood metabolites
-
Wikoff WR, Anfora AT, Liu J, Schultz PG, Lesley SA, Peters EC, et al. 2009. Metabolomics analysis reveals large effects of gut microflora on mammalian blood metabolites. Proc Natl Acad Sci USA 106:3698-3703.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 3698-3703
-
-
Wikoff, W.R.1
Anfora, A.T.2
Liu, J.3
Schultz, P.G.4
Lesley, S.A.5
Peters, E.C.6
-
38
-
-
84867088294
-
The human microbiome and infectious diseases: Beyond Koch
-
doi:10.1155/2008/296873
-
Young VB, Britton RA, Schmidt TM. 2008. The human microbiome and infectious diseases: beyond Koch. Interdiscip Perspect Infect Dis 2008:296873; doi:10.1155/2008/296873.
-
(2008)
Interdiscip Perspect Infect Dis
, vol.2008
, pp. 296873
-
-
Young, V.B.1
Britton, R.A.2
Schmidt, T.M.3
|