-
1
-
-
0039257805
-
Acetone-butanol fermentation of starches
-
PID: 13031513, COI: 1:CAS:528:DyaG3sXis1Ojsg%3D%3D
-
Beesch SC (1953) Acetone-butanol fermentation of starches. Appl Microbiol 1:85–95
-
(1953)
Appl Microbiol
, vol.1
, pp. 85-95
-
-
Beesch, S.C.1
-
2
-
-
0033998365
-
Bacteriophage infections in the industrial acetone butanol (AB) fermentation process
-
PID: 10937483, COI: 1:CAS:528:DC%2BD3cXit1Kktbk%3D
-
Jones DT, Shirley M, Wu X, Keis S (2000) Bacteriophage infections in the industrial acetone butanol (AB) fermentation process. J Mol Microbiol Biotechnol 2:21–26
-
(2000)
J Mol Microbiol Biotechnol
, vol.2
, pp. 21-26
-
-
Jones, D.T.1
Shirley, M.2
Wu, X.3
Keis, S.4
-
3
-
-
34250662138
-
The CRISPRdb database and tools to display CRISPRs and to generate dictionaries of spacers and repeats
-
PID: 17521438
-
Grissa I, Vergnaud G, Pourcel C (2007) The CRISPRdb database and tools to display CRISPRs and to generate dictionaries of spacers and repeats. BMC Bioinformatics 8:172
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 172
-
-
Grissa, I.1
Vergnaud, G.2
Pourcel, C.3
-
4
-
-
79956157571
-
Evolution and classification of the CRISPR-Cas systems
-
PID: 21552286, COI: 1:CAS:528:DC%2BC3MXlvVagt7Y%3D
-
Makarova KS, Haft DH, Barrangou R, Brouns SJ, Charpentier E, Horvath P, Moineau S, Mojica FJ, Wolf YI, Yakunin AF, van der Oost J, Koonin EV (2011) Evolution and classification of the CRISPR-Cas systems. Nat Rev Microbiol 9:467–477
-
(2011)
Nat Rev Microbiol
, vol.9
, pp. 467-477
-
-
Makarova, K.S.1
Haft, D.H.2
Barrangou, R.3
Brouns, S.J.4
Charpentier, E.5
Horvath, P.6
Moineau, S.7
Mojica, F.J.8
Wolf, Y.I.9
Yakunin, A.F.10
van der Oost, J.11
Koonin, E.V.12
-
5
-
-
84857097177
-
RNA-guided genetic silencing systems in bacteria and archaea
-
PID: 22337052, COI: 1:CAS:528:DC%2BC38Xit12jur4%3D
-
Wiedenheft B, Sternberg SH, Doudna JA (2012) RNA-guided genetic silencing systems in bacteria and archaea. Nature 482:331–338
-
(2012)
Nature
, vol.482
, pp. 331-338
-
-
Wiedenheft, B.1
Sternberg, S.H.2
Doudna, J.A.3
-
6
-
-
35748974534
-
Evolutionary conservation of sequence and secondary structures in CRISPR repeats
-
PID: 17442114
-
Kunin V, Sorek R, Hugenholtz P (2007) Evolutionary conservation of sequence and secondary structures in CRISPR repeats. Genome Biol 8:R61
-
(2007)
Genome Biol
, vol.8
, pp. R61
-
-
Kunin, V.1
Sorek, R.2
Hugenholtz, P.3
-
7
-
-
77955342938
-
CRISPR-mediated phage resistance and the ghost of coevolution past
-
PID: 20236977, COI: 1:CAS:528:DC%2BC3cXhtVOmur%2FE
-
Vale PF, Little TJ (2010) CRISPR-mediated phage resistance and the ghost of coevolution past. Proc Biol Sci 277:2097–2103
-
(2010)
Proc Biol Sci
, vol.277
, pp. 2097-2103
-
-
Vale, P.F.1
Little, T.J.2
-
8
-
-
34248400310
-
A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/Cas subtypes exist in prokaryotic genomes
-
PID: 16292354
-
Haft DH, Selengut J, Mongodin EF, Nelson KE (2005) A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/Cas subtypes exist in prokaryotic genomes. PLoS Comput Biol 1:e60
-
(2005)
PLoS Comput Biol
, vol.1
, pp. e60
-
-
Haft, D.H.1
Selengut, J.2
Mongodin, E.F.3
Nelson, K.E.4
-
9
-
-
84873729095
-
Multiplex genome engineering using CRISPR/Cas systems
-
PID: 23287718, COI: 1:CAS:528:DC%2BC3sXit1ygtb8%3D
-
Cong L, Ran FA, Cox D, Lin S, Barretto R, Habib N, Hsu PD, Wu X, Jiang W, Marraffini LA, Zhang F (2013) Multiplex genome engineering using CRISPR/Cas systems. Science 339:819–823
-
(2013)
Science
, vol.339
, pp. 819-823
-
-
Cong, L.1
Ran, F.A.2
Cox, D.3
Lin, S.4
Barretto, R.5
Habib, N.6
Hsu, P.D.7
Wu, X.8
Jiang, W.9
Marraffini, L.A.10
Zhang, F.11
-
10
-
-
84873734105
-
RNA-guided human genome engineering via Cas9
-
PID: 23287722, COI: 1:CAS:528:DC%2BC3sXit1ygtb0%3D
-
Mali P, Yang L, Esvelt KM, Aach J, Guell M, DiCarlo JE, Norville JE, Church GM (2013) RNA-guided human genome engineering via Cas9. Science 339:823–826
-
(2013)
Science
, vol.339
, pp. 823-826
-
-
Mali, P.1
Yang, L.2
Esvelt, K.M.3
Aach, J.4
Guell, M.5
DiCarlo, J.E.6
Norville, J.E.7
Church, G.M.8
-
11
-
-
84877707375
-
One-step generation of mice carrying mutations in multiple genes by CRISPR/Cas-mediated genome engineering
-
PID: 23643243, COI: 1:CAS:528:DC%2BC3sXmvF2nt7w%3D
-
Wang H, Yang H, Shivalila CS, Dawlaty MM, Cheng AW, Zhang F, Jaenisch R (2013) One-step generation of mice carrying mutations in multiple genes by CRISPR/Cas-mediated genome engineering. Cell 153:910–918
-
(2013)
Cell
, vol.153
, pp. 910-918
-
-
Wang, H.1
Yang, H.2
Shivalila, C.S.3
Dawlaty, M.M.4
Cheng, A.W.5
Zhang, F.6
Jaenisch, R.7
-
12
-
-
67650711615
-
SOAP2: an improved ultrafast tool for short read alignment
-
PID: 19497933, COI: 1:CAS:528:DC%2BD1MXovVeku7w%3D
-
Li R, Yu C, Li Y, Lam TW, Yiu SM, Kristiansen K, Wang J (2009) SOAP2: an improved ultrafast tool for short read alignment. Bioinformatics 25:1966–1967
-
(2009)
Bioinformatics
, vol.25
, pp. 1966-1967
-
-
Li, R.1
Yu, C.2
Li, Y.3
Lam, T.W.4
Yiu, S.M.5
Kristiansen, K.6
Wang, J.7
-
13
-
-
0033485517
-
Improved microbial gene identification with GLIMMER
-
PID: 10556321, COI: 1:CAS:528:DyaK1MXnvVanu7o%3D
-
Delcher AL, Harmon D, Kasif S, White O, Salzberg SL (1999) Improved microbial gene identification with GLIMMER. Nucleic Acids Res 27:4636–4641
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 4636-4641
-
-
Delcher, A.L.1
Harmon, D.2
Kasif, S.3
White, O.4
Salzberg, S.L.5
-
14
-
-
2942544417
-
Gene finding in novel genomes
-
PID: 15144565
-
Korf I (2004) Gene finding in novel genomes. BMC Bioinformatics 5:59
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 59
-
-
Korf, I.1
-
15
-
-
29144453390
-
Gene identification in novel eukaryotic genomes by self-training algorithm
-
PID: 16314312, COI: 1:CAS:528:DC%2BD2MXhtlSjurnL
-
Lomsadze A, Ter-Hovhannisyan V, Chernoff YO, Borodovsky M (2005) Gene identification in novel eukaryotic genomes by self-training algorithm. Nucleic Acids Res 33:6494–6506
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 6494-6506
-
-
Lomsadze, A.1
Ter-Hovhannisyan, V.2
Chernoff, Y.O.3
Borodovsky, M.4
-
16
-
-
48449095385
-
The Vienna RNA websuite
-
Gruber AR, Lorenz R, Bernhart SH, Neubock R, Hofacker IL (2008) The Vienna RNA websuite. Nucleic Acids Res 36:70–74
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 70-74
-
-
Gruber, A.R.1
Lorenz, R.2
Bernhart, S.H.3
Neubock, R.4
Hofacker, I.L.5
-
17
-
-
0042902833
-
The COG database: an updated version includes eukaryotes
-
PID: 12969510
-
Tatusov RL, Fedorova ND, Jackson JD, Jacobs AR, Kiryutin B, Koonin EV, Krylov DM, Mazumder R, Mekhedov SL, Nikolskaya AN, Rao BS, Smirnov S, Sverdlov AV, Vasudevan S, Wolf YI, Yin JJ, Natale DA (2003) The COG database: an updated version includes eukaryotes. BMC Bioinformatics 4:41
-
(2003)
BMC Bioinformatics
, vol.4
, pp. 41
-
-
Tatusov, R.L.1
Fedorova, N.D.2
Jackson, J.D.3
Jacobs, A.R.4
Kiryutin, B.5
Koonin, E.V.6
Krylov, D.M.7
Mazumder, R.8
Mekhedov, S.L.9
Nikolskaya, A.N.10
Rao, B.S.11
Smirnov, S.12
Sverdlov, A.V.13
Vasudevan, S.14
Wolf, Y.I.15
Yin, J.J.16
Natale, D.A.17
-
18
-
-
3042666256
-
MUSCLE: multiple sequence alignment with high accuracy and high throughput
-
PID: 15034147, COI: 1:CAS:528:DC%2BD2cXisF2ks7w%3D
-
Edgar RC (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32:1792–1797
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 1792-1797
-
-
Edgar, R.C.1
-
19
-
-
34547781750
-
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
-
PID: 17488738, COI: 1:CAS:528:DC%2BD2sXpsVGrsL8%3D
-
Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol 24:1596–1599
-
(2007)
Mol Biol Evol
, vol.24
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
-
20
-
-
33644700003
-
Toward automatic reconstruction of a highly resolved tree of life
-
PID: 16513982, COI: 1:CAS:528:DC%2BD28XhvVeku7s%3D
-
Ciccarelli FD, Doerks T, von Mering C, Creevey CJ, Snel B, Bork P (2006) Toward automatic reconstruction of a highly resolved tree of life. Science 311:1283–1287
-
(2006)
Science
, vol.311
, pp. 1283-1287
-
-
Ciccarelli, F.D.1
Doerks, T.2
von Mering, C.3
Creevey, C.J.4
Snel, B.5
Bork, P.6
-
21
-
-
30344473638
-
A novel algorithm and web-based tool for comparing two alternative phylogenetic trees
-
PID: 16234319, COI: 1:CAS:528:DC%2BD28XisFKntQ%3D%3D
-
Nye TM, Lio P, Gilks WR (2006) A novel algorithm and web-based tool for comparing two alternative phylogenetic trees. Bioinformatics 22:117–119
-
(2006)
Bioinformatics
, vol.22
, pp. 117-119
-
-
Nye, T.M.1
Lio, P.2
Gilks, W.R.3
-
22
-
-
0043123153
-
Vienna RNA secondary structure server
-
PID: 12824340, COI: 1:CAS:528:DC%2BD3sXltVWisrs%3D
-
Hofacker IL (2003) Vienna RNA secondary structure server. Nucleic Acids Res 31:3429–3431
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 3429-3431
-
-
Hofacker, I.L.1
-
23
-
-
77955085897
-
Self-targeting by CRISPR: gene regulation or autoimmunity?
-
PID: 20598393, COI: 1:CAS:528:DC%2BC3cXptlWnsLY%3D
-
Stern A, Keren L, Wurtzel O, Amitai G, Sorek R (2010) Self-targeting by CRISPR: gene regulation or autoimmunity? Trends Genet 26:335–340
-
(2010)
Trends Genet
, vol.26
, pp. 335-340
-
-
Stern, A.1
Keren, L.2
Wurtzel, O.3
Amitai, G.4
Sorek, R.5
-
24
-
-
79958251726
-
Identification of CRISPR and riboswitch related RNAs among novel noncoding RNAs of the euryarchaeon Pyrococcus abyssi
-
COI: 1:CAS:528:DC%2BC3MXotVWjsbg%3D
-
Phok K, Moisan A, Rinaldi D, Brucato N, Carpousis AJ, Gaspin C, Clouet-d’Orval B (2011) Identification of CRISPR and riboswitch related RNAs among novel noncoding RNAs of the euryarchaeon Pyrococcus abyssi. BMC Genom 12:312
-
(2011)
BMC Genom
, vol.12
, pp. 312
-
-
Phok, K.1
Moisan, A.2
Rinaldi, D.3
Brucato, N.4
Carpousis, A.J.5
Gaspin, C.6
Clouet-D’Orval, B.7
-
25
-
-
77956621546
-
H-NS-mediated repression of CRISPR-based immunity in Escherichia coli K12 can be relieved by the transcription activator LeuO
-
PID: 20659289, COI: 1:CAS:528:DC%2BC3cXht1KisrnL
-
Westra ER, Pul U, Heidrich N, Jore MM, Lundgren M, Stratmann T, Wurm R, Raine A, Mescher M, Van Heereveld L, Mastop M, Wagner EG, Schnetz K, Van Der Oost J, Wagner R, Brouns SJ (2010) H-NS-mediated repression of CRISPR-based immunity in Escherichia coli K12 can be relieved by the transcription activator LeuO. Mol Microbiol 77:1380–1393
-
(2010)
Mol Microbiol
, vol.77
, pp. 1380-1393
-
-
Westra, E.R.1
Pul, U.2
Heidrich, N.3
Jore, M.M.4
Lundgren, M.5
Stratmann, T.6
Wurm, R.7
Raine, A.8
Mescher, M.9
Van Heereveld, L.10
Mastop, M.11
Wagner, E.G.12
Schnetz, K.13
Van Der Oost, J.14
Wagner, R.15
Brouns, S.J.16
-
26
-
-
77249170201
-
CRISPR interference: RNA-directed adaptive immunity in bacteria and archaea
-
PID: 20125085, COI: 1:CAS:528:DC%2BC3cXitFCrsLs%3D
-
Marraffini LA, Sontheimer EJ (2010) CRISPR interference: RNA-directed adaptive immunity in bacteria and archaea. Nat Rev Genet 11:181–190
-
(2010)
Nat Rev Genet
, vol.11
, pp. 181-190
-
-
Marraffini, L.A.1
Sontheimer, E.J.2
-
27
-
-
77957935381
-
CRISPR/Cas system and its role in phage-bacteria interactions
-
PID: 20528693, COI: 1:CAS:528:DC%2BC3cXhsVeisL3I
-
Deveau H, Garneau JE, Moineau S (2010) CRISPR/Cas system and its role in phage-bacteria interactions. Annu Rev Microbiol 64:475–493
-
(2010)
Annu Rev Microbiol
, vol.64
, pp. 475-493
-
-
Deveau, H.1
Garneau, J.E.2
Moineau, S.3
-
28
-
-
77955342938
-
CRISPR-mediated phage resistance and the ghost of coevolution past
-
PID: 20236977, COI: 1:CAS:528:DC%2BC3cXhtVOmur%2FE
-
Vale PF, Little TJ (2010) CRISPR-mediated phage resistance and the ghost of coevolution past. Proc Biol Sci 277:2097–2103
-
(2010)
Proc Biol Sci
, vol.277
, pp. 2097-2103
-
-
Vale, P.F.1
Little, T.J.2
-
29
-
-
34047118522
-
CRISPR provides acquired resistance against viruses in prokaryotes
-
PID: 17379808, COI: 1:CAS:528:DC%2BD2sXjtlWntb8%3D
-
Barrangou R, Fremaux C, Deveau H, Richards M, Boyaval P, Moineau S, Romero DA, Horvath P (2007) CRISPR provides acquired resistance against viruses in prokaryotes. Science 315:1709–1712
-
(2007)
Science
, vol.315
, pp. 1709-1712
-
-
Barrangou, R.1
Fremaux, C.2
Deveau, H.3
Richards, M.4
Boyaval, P.5
Moineau, S.6
Romero, D.A.7
Horvath, P.8
-
30
-
-
39149142575
-
CRISPR–a widespread system that provides acquired resistance against phages in bacteria and archaea
-
PID: 18157154, COI: 1:CAS:528:DC%2BD1cXhvFCgt70%3D
-
Sorek R, Kunin V, Hugenholtz P (2008) CRISPR–a widespread system that provides acquired resistance against phages in bacteria and archaea. Nat Rev Microbiol 6:181–186
-
(2008)
Nat Rev Microbiol
, vol.6
, pp. 181-186
-
-
Sorek, R.1
Kunin, V.2
Hugenholtz, P.3
-
31
-
-
68249102788
-
CRISPR-based adaptive and heritable immunity in prokaryotes
-
PID: 19646880
-
van der Oost J, Jore MM, Westra ER, Lundgren M, Brouns SJ (2009) CRISPR-based adaptive and heritable immunity in prokaryotes. Trends Biochem Sci 34:401–407
-
(2009)
Trends Biochem Sci
, vol.34
, pp. 401-407
-
-
van der Oost, J.1
Jore, M.M.2
Westra, E.R.3
Lundgren, M.4
Brouns, S.J.5
-
32
-
-
84857812156
-
Nature and intensity of selection pressure on CRISPR-associated genes
-
PID: 22178975, COI: 1:CAS:528:DC%2BC38XjtV2isbg%3D
-
Takeuchi N, Wolf YI, Makarova KS, Koonin EV (2012) Nature and intensity of selection pressure on CRISPR-associated genes. J Bacteriol 194:1216–1225
-
(2012)
J Bacteriol
, vol.194
, pp. 1216-1225
-
-
Takeuchi, N.1
Wolf, Y.I.2
Makarova, K.S.3
Koonin, E.V.4
-
33
-
-
16444385662
-
Intervening sequences of regularly spaced prokaryotic repeats derive from foreign genetic elements
-
PID: 15791728, COI: 1:CAS:528:DC%2BD2MXit1Sntb8%3D
-
Mojica FJ, Diez-Villasenor C, Garcia-Martinez J, Soria E (2005) Intervening sequences of regularly spaced prokaryotic repeats derive from foreign genetic elements. J Mol Evol 60:174–182
-
(2005)
J Mol Evol
, vol.60
, pp. 174-182
-
-
Mojica, F.J.1
Diez-Villasenor, C.2
Garcia-Martinez, J.3
Soria, E.4
-
34
-
-
19144366140
-
Viral metagenomics
-
PID: 15886693, COI: 1:CAS:528:DC%2BD2MXksFKmsLs%3D
-
Edwards RA, Rohwer F (2005) Viral metagenomics. Nat Rev Microbiol 3:504–510
-
(2005)
Nat Rev Microbiol
, vol.3
, pp. 504-510
-
-
Edwards, R.A.1
Rohwer, F.2
-
35
-
-
84865070369
-
A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity
-
PID: 22745249, COI: 1:CAS:528:DC%2BC38XhtFOqsb3L
-
Jinek M, Chylinski K, Fonfara I, Hauer M, Doudna JA, Charpentier E (2012) A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity. Science 337:816–821
-
(2012)
Science
, vol.337
, pp. 816-821
-
-
Jinek, M.1
Chylinski, K.2
Fonfara, I.3
Hauer, M.4
Doudna, J.A.5
Charpentier, E.6
-
36
-
-
16044367245
-
Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii
-
PID: 8688087, COI: 1:CAS:528:DyaK28XltFKrsrs%3D
-
Bult CJ, White O, Olsen GJ, Zhou L, Fleischmann RD, Sutton GG, Blake JA, FitzGerald LM, Clayton RA, Gocayne JD, Kerlavage AR, Dougherty BA, Tomb JF, Adams MD, Reich CI, Overbeek R, Kirkness EF, Weinstock KG, Merrick JM, Glodek A, Scott JL, Geoghagen NS, Venter JC (1996) Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii. Science 273:1058–1073
-
(1996)
Science
, vol.273
, pp. 1058-1073
-
-
Bult, C.J.1
White, O.2
Olsen, G.J.3
Zhou, L.4
Fleischmann, R.D.5
Sutton, G.G.6
Blake, J.A.7
FitzGerald, L.M.8
Clayton, R.A.9
Gocayne, J.D.10
Kerlavage, A.R.11
Dougherty, B.A.12
Tomb, J.F.13
Adams, M.D.14
Reich, C.I.15
Overbeek, R.16
Kirkness, E.F.17
Weinstock, K.G.18
Merrick, J.M.19
Glodek, A.20
Scott, J.L.21
Geoghagen, N.S.22
Venter, J.C.23
more..
-
37
-
-
33745550745
-
The multidrug-resistant human pathogen Clostridium difficile has a highly mobile, mosaic genome
-
PID: 16804543
-
Sebaihia M, Wren BW, Mullany P, Fairweather NF, Minton N, Stabler R, Thomson NR, Roberts AP, Cerdeno-Tarraga AM, Wang H, Holden MT, Wright A, Churcher C, Quail MA, Baker S, Bason N, Brooks K, Chillingworth T, Cronin A, Davis P, Dowd L, Fraser A, Feltwell T, Hance Z, Holroyd S, Jagels K, Moule S, Mungall K, Price C, Rabbinowitsch E, Sharp S, Simmonds M, Stevens K, Unwin L, Whithead S, Dupuy B, Dougan G, Barrell B, Parkhill J (2006) The multidrug-resistant human pathogen Clostridium difficile has a highly mobile, mosaic genome. Nat Genet 38:779–786
-
(2006)
Nat Genet
, vol.38
, pp. 779-786
-
-
Sebaihia, M.1
Wren, B.W.2
Mullany, P.3
Fairweather, N.F.4
Minton, N.5
Stabler, R.6
Thomson, N.R.7
Roberts, A.P.8
Cerdeno-Tarraga, A.M.9
Wang, H.10
Holden, M.T.11
Wright, A.12
Churcher, C.13
Quail, M.A.14
Baker, S.15
Bason, N.16
Brooks, K.17
Chillingworth, T.18
Cronin, A.19
Davis, P.20
Dowd, L.21
Fraser, A.22
Feltwell, T.23
Hance, Z.24
Holroyd, S.25
Jagels, K.26
Moule, S.27
Mungall, K.28
Price, C.29
Rabbinowitsch, E.30
Sharp, S.31
Simmonds, M.32
Stevens, K.33
Unwin, L.34
Whithead, S.35
Dupuy, B.36
Dougan, G.37
Barrell, B.38
Parkhill, J.39
more..
-
38
-
-
49649114086
-
Small CRISPR RNAs guide antiviral defense in prokaryotes
-
PID: 18703739, COI: 1:CAS:528:DC%2BD1cXpslWrur0%3D
-
Brouns SJ, Jore MM, Lundgren M, Westra ER, Slijkhuis RJ, Snijders AP, Dickman MJ, Makarova KS, Koonin EV, van der Oost J (2008) Small CRISPR RNAs guide antiviral defense in prokaryotes. Science 321:960–964
-
(2008)
Science
, vol.321
, pp. 960-964
-
-
Brouns, S.J.1
Jore, M.M.2
Lundgren, M.3
Westra, E.R.4
Slijkhuis, R.J.5
Snijders, A.P.6
Dickman, M.J.7
Makarova, K.S.8
Koonin, E.V.9
van der Oost, J.10
-
39
-
-
57049149666
-
Prokaryotic silencing (psi)RNAs in Pyrococcus furiosus
-
PID: 18971321, COI: 1:CAS:528:DC%2BD1cXhsFWgtL7J
-
Hale C, Kleppe K, Terns RM, Terns MP (2008) Prokaryotic silencing (psi)RNAs in Pyrococcus furiosus. RNA 14:2572–2579
-
(2008)
RNA
, vol.14
, pp. 2572-2579
-
-
Hale, C.1
Kleppe, K.2
Terns, R.M.3
Terns, M.P.4
-
40
-
-
62949197925
-
CRISPR families of the crenarchaeal genus Sulfolobus: bidirectional transcription and dynamic properties
-
PID: 19239620
-
Lillestol RK, Shah SA, Brugger K, Redder P, Phan H, Christiansen J, Garrett RA (2009) CRISPR families of the crenarchaeal genus Sulfolobus: bidirectional transcription and dynamic properties. Mol Microbiol 72:259–272
-
(2009)
Mol Microbiol
, vol.72
, pp. 259-272
-
-
Lillestol, R.K.1
Shah, S.A.2
Brugger, K.3
Redder, P.4
Phan, H.5
Christiansen, J.6
Garrett, R.A.7
-
41
-
-
77949398275
-
Identification and characterization of E. coli CRISPR-cas promoters and their silencing by H-NS
-
PID: 20132443, COI: 1:CAS:528:DC%2BC3cXktFKku7s%3D
-
Pul U, Wurm R, Arslan Z, Geissen R, Hofmann N, Wagner R (2010) Identification and characterization of E. coli CRISPR-cas promoters and their silencing by H-NS. Mol Microbiol 75:1495–1512
-
(2010)
Mol Microbiol
, vol.75
, pp. 1495-1512
-
-
Pul, U.1
Wurm, R.2
Arslan, Z.3
Geissen, R.4
Hofmann, N.5
Wagner, R.6
-
42
-
-
67149084593
-
Analysis of CRISPR system function in plant pathogen Xanthomonas oryzae
-
PID: 19459963, COI: 1:CAS:528:DC%2BD1MXnslGntrk%3D
-
Semenova E, Nagornykh M, Pyatnitskiy M, Artamonova II, Severinov K (2009) Analysis of CRISPR system function in plant pathogen Xanthomonas oryzae. FEMS Microbiol Lett 296:110–116
-
(2009)
FEMS Microbiol Lett
, vol.296
, pp. 110-116
-
-
Semenova, E.1
Nagornykh, M.2
Pyatnitskiy, M.3
Artamonova, I.I.4
Severinov, K.5
-
43
-
-
51649108915
-
Global gene expression mediated by Thermus thermophilus SdrP, a CRP/FNR family transcriptional regulator
-
PID: 18699868, COI: 1:CAS:528:DC%2BD1cXht1amsL7N
-
Agari Y, Kashihara A, Yokoyama S, Kuramitsu S, Shinkai A (2008) Global gene expression mediated by Thermus thermophilus SdrP, a CRP/FNR family transcriptional regulator. Mol Microbiol 70:60–75
-
(2008)
Mol Microbiol
, vol.70
, pp. 60-75
-
-
Agari, Y.1
Kashihara, A.2
Yokoyama, S.3
Kuramitsu, S.4
Shinkai, A.5
-
44
-
-
73149087453
-
Transcription profile of Thermus thermophilus CRISPR systems after phage infection
-
PID: 19891975, COI: 1:CAS:528:DC%2BC3cXjsVamtw%3D%3D
-
Agari Y, Sakamoto K, Tamakoshi M, Oshima T, Kuramitsu S, Shinkai A (2010) Transcription profile of Thermus thermophilus CRISPR systems after phage infection. J Mol Biol 395:270–281
-
(2010)
J Mol Biol
, vol.395
, pp. 270-281
-
-
Agari, Y.1
Sakamoto, K.2
Tamakoshi, M.3
Oshima, T.4
Kuramitsu, S.5
Shinkai, A.6
-
45
-
-
34248359835
-
Transcription activation mediated by a cyclic AMP receptor protein from Thermus thermophilus HB8
-
PID: 17369302, COI: 1:CAS:528:DC%2BD2sXlvFGju7w%3D
-
Shinkai A, Kira S, Nakagawa N, Kashihara A, Kuramitsu S, Yokoyama S (2007) Transcription activation mediated by a cyclic AMP receptor protein from Thermus thermophilus HB8. J Bacteriol 189:3891–3901
-
(2007)
J Bacteriol
, vol.189
, pp. 3891-3901
-
-
Shinkai, A.1
Kira, S.2
Nakagawa, N.3
Kashihara, A.4
Kuramitsu, S.5
Yokoyama, S.6
|