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Volumn 88, Issue 21, 2014, Pages 12882-12894

Possible footprints of APOBEC3F and/or other APOBEC3 deaminases, but not APOBEC3G, on HIV-1 from patients with acute/early and chronic infections

Author keywords

[No Author keywords available]

Indexed keywords

APOLIPOPROTEIN B; APOLIPOPROTEIN B MESSENGER RNA EDITING ENZYME CATALYTIC POLYPEPTIDE 3F; APOLIPOPROTEIN B MESSENGER RNA EDITING ENZYME CATALYTIC POLYPEPTIDE 3G; CYTIDINE DEAMINASE; DEAMINASE; PROTEASOME; VIF PROTEIN; VIRUS PROTEIN; VIRUS RNA; APOBEC3 PROTEIN, HUMAN; APOBEC3F PROTEIN, HUMAN; APOBEC3G PROTEIN, HUMAN; CYTOSINE DEAMINASE; POL PROTEIN;

EID: 84907983225     PISSN: 0022538X     EISSN: 10985514     Source Type: Journal    
DOI: 10.1128/JVI.01460-14     Document Type: Article
Times cited : (15)

References (100)
  • 1
    • 0028952146 scopus 로고
    • HIV population dynamics in vivo: implications for genetic variation, pathogenesis, and therapy
    • Coffin JM. 1995. HIV population dynamics in vivo: implications for genetic variation, pathogenesis, and therapy. Science 267:483-489. http://dx.doi.org/10.1126/science.7824947.
    • (1995) Science , vol.267 , pp. 483-489
    • Coffin, J.M.1
  • 3
    • 60049083257 scopus 로고    scopus 로고
    • APOBEC proteins and intrinsic resistance to HIV-1 infection
    • Malim MH. 2009. APOBEC proteins and intrinsic resistance to HIV-1 infection. Philos. Trans. R. Soc. Lond. B Biol. Sci. 364:675-687. http://dx.doi.org/10.1098/rstb.2008.0185.
    • (2009) Philos. Trans. R. Soc. Lond. B Biol. Sci. , vol.364 , pp. 675-687
    • Malim, M.H.1
  • 4
    • 84871943090 scopus 로고    scopus 로고
    • APOBEC3G restricts HIV-1 to a greater extent than APOBEC3F and APOBEC3DE in human primary CD4+ T cells and macrophages
    • Chaipan C, Smith JL, Hu WS, Pathak VK. 2013. APOBEC3G restricts HIV-1 to a greater extent than APOBEC3F and APOBEC3DE in human primary CD4+ T cells and macrophages. J. Virol. 87:444-453. http://dx.doi.org/10.1128/JVI.00676-12.
    • (2013) J. Virol. , vol.87 , pp. 444-453
    • Chaipan, C.1    Smith, J.L.2    Hu, W.S.3    Pathak, V.K.4
  • 5
    • 33750288097 scopus 로고    scopus 로고
    • Human APOBEC3 proteins, retrovirus restriction, and HIV drug resistance
    • Hache G, Mansky LM, Harris RS. 2006. Human APOBEC3 proteins, retrovirus restriction, and HIV drug resistance. AIDS Rev. 8:148-157.
    • (2006) AIDS Rev. , vol.8 , pp. 148-157
    • Hache, G.1    Mansky, L.M.2    Harris, R.S.3
  • 6
    • 53649092485 scopus 로고    scopus 로고
    • Enhancing immunity to HIV through APOBEC
    • Harris RS. 2008. Enhancing immunity to HIV through APOBEC. Nat. Biotechnol. 26:1089-1090. http://dx.doi.org/10.1038/nbt1008-1089.
    • (2008) Nat. Biotechnol. , vol.26 , pp. 1089-1090
    • Harris, R.S.1
  • 8
    • 33750997315 scopus 로고    scopus 로고
    • Natural resistance to HIV infection: the Vif-APOBEC interaction
    • Malim MH. 2006. Natural resistance to HIV infection: the Vif-APOBEC interaction. C. R. Biol. 329:871-875. http://dx.doi.org/10.1016/j.crvi.2006.01.012.
    • (2006) C. R. Biol. , vol.329 , pp. 871-875
    • Malim, M.H.1
  • 9
    • 0038681023 scopus 로고    scopus 로고
    • Broad antiretroviral defence by humanAPOBEC3Gthrough lethal editing of nascent reverse transcripts
    • Mangeat B, Turelli P, Caron G, Friedli M, Perrin L, Trono D. 2003. Broad antiretroviral defence by humanAPOBEC3Gthrough lethal editing of nascent reverse transcripts. Nature 424:99-103. http://dx.doi.org/10.1038/nature01709.
    • (2003) Nature , vol.424 , pp. 99-103
    • Mangeat, B.1    Turelli, P.2    Caron, G.3    Friedli, M.4    Perrin, L.5    Trono, D.6
  • 10
    • 67649888155 scopus 로고    scopus 로고
    • Natural variation in Vif: differential impact on APOBEC3G/3F and a potential role in HIV-1 diversification
    • Simon V, Zennou V, Murray D, Huang Y, Ho DD, Bieniasz PD. 2005. Natural variation in Vif: differential impact on APOBEC3G/3F and a potential role in HIV-1 diversification. PLoS Pathog. 1:e6. http://dx.doi.org /10.1371/journal.ppat.0010006.
    • (2005) PLoS Pathog. , vol.1
    • Simon, V.1    Zennou, V.2    Murray, D.3    Huang, Y.4    Ho, D.D.5    Bieniasz, P.D.6
  • 11
    • 0038004471 scopus 로고    scopus 로고
    • The cytidine deaminase CEM15 induces hypermutation in newly synthesized HIV-1 DNA
    • Zhang H, Yang B, Pomerantz RJ, Zhang C, Arunachalam SC, Gao L. 2003 The cytidine deaminase CEM15 induces hypermutation in newly synthesized HIV-1 DNA. Nature 424:94-98. http://dx.doi.org/10.1038 /nature01707.
    • (2003) Nature , vol.424 , pp. 94-98
    • Zhang, H.1    Yang, B.2    Pomerantz, R.J.3    Zhang, C.4    Arunachalam, S.C.5    Gao, L.6
  • 13
    • 84896268438 scopus 로고    scopus 로고
    • Structural analysis of viral infectivity factor of HIV type 1 and its interaction with A3G, EloC and EloB
    • da Costa KS, Leal E, dos Santos AM, Lima e Lima AH, Alves CN, Lameira J. 2014. Structural analysis of viral infectivity factor of HIV type 1 and its interaction with A3G, EloC and EloB. PLoS One 9:e89116. http: //dx.doi.org/10.1371/journal.pone.0089116.
    • (2014) PLoS One , vol.9
    • da Costa, K.S.1    Leal, E.2    dos Santos, A.M.3    Lima4    Lima, A.H.5    Alves, C.N.6    Lameira, J.7
  • 14
    • 84892188402 scopus 로고    scopus 로고
    • Structural basis for hijacking CBF-beta and CUL5 E3 ligase complex by HIV-1 Vif
    • Guo Y, Dong L, Qiu X, Wang Y, Zhang B, Liu H, Yu Y, Zang Y, Yang M, Huang Z. 2014. Structural basis for hijacking CBF-beta and CUL5 E3 ligase complex by HIV-1 Vif. Nature 505:229-233. http://dx.doi.org/10.1038/nature12884.
    • (2014) Nature , vol.505 , pp. 229-233
    • Guo, Y.1    Dong, L.2    Qiu, X.3    Wang, Y.4    Zhang, B.5    Liu, H.6    Yu, Y.7    Zang, Y.8    Yang, M.9    Huang, Z.10
  • 15
    • 0242709301 scopus 로고    scopus 로고
    • The Vif protein of HIV triggers degradation of the human antiretroviral DNA deaminase APOBEC3G
    • Conticello SG, Harris RS, Neuberger MS. 2003. The Vif protein of HIV triggers degradation of the human antiretroviral DNA deaminase APOBEC3G. Curr. Biol. 13:2009-2013. http://dx.doi.org/10.1016/j.cub.2003.10.034.
    • (2003) Curr. Biol. , vol.13 , pp. 2009-2013
    • Conticello, S.G.1    Harris, R.S.2    Neuberger, M.S.3
  • 16
    • 0344845196 scopus 로고    scopus 로고
    • HIV-1 Vif protein binds the editing enzyme APOBEC3G and induces its degradation
    • Marin M, Rose KM, Kozak SL, Kabat D. 2003. HIV-1 Vif protein binds the editing enzyme APOBEC3G and induces its degradation. Nat. Med. 9:1398-1403. http://dx.doi.org/10.1038/nm946.
    • (2003) Nat. Med. , vol.9 , pp. 1398-1403
    • Marin, M.1    Rose, K.M.2    Kozak, S.L.3    Kabat, D.4
  • 17
    • 1542379821 scopus 로고    scopus 로고
    • Vif overcomes the innate antiviral activity of APOBEC3G by promoting its degradation in the ubiquitin-proteasome pathway
    • Mehle A, Strack B, Ancuta P, Zhang C, McPike M, Gabuzda D. 2004. Vif overcomes the innate antiviral activity of APOBEC3G by promoting its degradation in the ubiquitin-proteasome pathway. J. Biol. Chem. 279: 7792-7798. http://dx.doi.org/10.1074/jbc.M313093200.
    • (2004) J. Biol. Chem. , vol.279 , pp. 7792-7798
    • Mehle, A.1    Strack, B.2    Ancuta, P.3    Zhang, C.4    McPike, M.5    Gabuzda, D.6
  • 18
    • 0344413641 scopus 로고    scopus 로고
    • The antiretroviral enzyme APOBEC3G is degraded by the proteasome in response to HIV-1 Vif
    • Sheehy AM, Gaddis NC, Malim MH. 2003. The antiretroviral enzyme APOBEC3G is degraded by the proteasome in response to HIV-1 Vif. Nat. Med. 9:1404-1407. http://dx.doi.org/10.1038/nm945.
    • (2003) Nat. Med. , vol.9 , pp. 1404-1407
    • Sheehy, A.M.1    Gaddis, N.C.2    Malim, M.H.3
  • 19
    • 0141638436 scopus 로고    scopus 로고
    • HIV-1 Vif blocks the antiviral activity of APOBEC3G by impairing both its translation and intracellular stability
    • Stopak K, de Noronha C, Yonemoto W, Greene WC. 2003. HIV-1 Vif blocks the antiviral activity of APOBEC3G by impairing both its translation and intracellular stability. Mol. Cell 12:591-601. http://dx.doi.org/10.1016/S1097-2765(03)00353-8.
    • (2003) Mol. Cell , vol.12 , pp. 591-601
    • Stopak, K.1    de Noronha, C.2    Yonemoto, W.3    Greene, W.C.4
  • 20
    • 0242578406 scopus 로고    scopus 로고
    • Induction of APOBEC3G ubiquitination and degradation by an HIV-1 Vif-Cul5-SCF complex
    • Yu X, Yu Y, Liu B, Luo K, Kong W, Mao P, Yu XF. 2003. Induction of APOBEC3G ubiquitination and degradation by an HIV-1 Vif-Cul5-SCF complex. Science 302:1056-1060. http://dx.doi.org/10.1126/science.1089591.
    • (2003) Science , vol.302 , pp. 1056-1060
    • Yu, X.1    Yu, Y.2    Liu, B.3    Luo, K.4    Kong, W.5    Mao, P.6    Yu, X.F.7
  • 22
    • 35948973926 scopus 로고    scopus 로고
    • Estimating the relative contribution of dNTP pool imbalance and APOBEC3G/3F editing to HIV evolution in vivo
    • Deforche K, Camacho R, Laethem KV, Shapiro B, Moreau Y, Rambaut A, Vandamme AM, Lemey P. 2007. Estimating the relative contribution of dNTP pool imbalance and APOBEC3G/3F editing to HIV evolution in vivo. J. Comput. Biol. 14:1105-1114. http://dx.doi.org/10.1089/cmb.2007.0073.
    • (2007) J. Comput. Biol. , vol.14 , pp. 1105-1114
    • Deforche, K.1    Camacho, R.2    Laethem, K.V.3    Shapiro, B.4    Moreau, Y.5    Rambaut, A.6    Vandamme, A.M.7    Lemey, P.8
  • 23
    • 0035173377 scopus 로고    scopus 로고
    • Human immunodeficiency virus reverse transcriptase and protease sequence database: an expanded data model integrating natural language text and sequence analysis programs
    • Kantor R, Machekano R, Gonzales MJ, Dupnik K, Schapiro JM, Shafer RW. 2001. Human immunodeficiency virus reverse transcriptase and protease sequence database: an expanded data model integrating natural language text and sequence analysis programs. Nucleic Acids Res. 29:296-299 http://dx.doi.org/10.1093/nar/29.1.296.
    • (2001) Nucleic Acids Res. , vol.29 , pp. 296-299
    • Kantor, R.1    Machekano, R.2    Gonzales, M.J.3    Dupnik, K.4    Schapiro, J.M.5    Shafer, R.W.6
  • 24
    • 22144494590 scopus 로고    scopus 로고
    • Optimization of a genotypic assay applicable to all human immunodeficiency virus type 1 protease and reverse transcriptase subtypes
    • Snoeck J, Riva C, Steegen K, Schrooten Y, Maes B, Vergne L, Van Laethem K, Peeters M, Vandamme AM. 2005. Optimization of a genotypic assay applicable to all human immunodeficiency virus type 1 protease and reverse transcriptase subtypes. J. Virol. Methods 128:47-53. http://dx.doi.org/10.1016/j.jviromet.2005.04.001.
    • (2005) J. Virol. Methods , vol.128 , pp. 47-53
    • Snoeck, J.1    Riva, C.2    Steegen, K.3    Schrooten, Y.4    Maes, B.5    Vergne, L.6    Van Laethem, K.7    Peeters, M.8    Vandamme, A.M.9
  • 25
    • 78649995387 scopus 로고    scopus 로고
    • Expanded evaluation of blood donors in the United States for human immunodeficiency virus type 1 non-B subtypes and antiretroviral drugresistant strains: 2005 through 2007
    • Brennan CA, Yamaguchi J, Devare SG, Foster GA, Stramer SL. 2010. Expanded evaluation of blood donors in the United States for human immunodeficiency virus type 1 non-B subtypes and antiretroviral drugresistant strains: 2005 through 2007. Transfusion 50:2707-2712. http://dx.doi.org/10.1111/j.1537-2995.2010.02767.x.
    • (2010) Transfusion , vol.50 , pp. 2707-2712
    • Brennan, C.A.1    Yamaguchi, J.2    Devare, S.G.3    Foster, G.A.4    Stramer, S.L.5
  • 26
    • 0003474197 scopus 로고    scopus 로고
    • PAUP*: phylogenetic analysis using parsimony (*and other methods), 4.0 b10 ed
    • Sinauer Associates, Sunderland, MA
    • Swofford DL. 2003. PAUP*: phylogenetic analysis using parsimony (*and other methods), 4.0 b10 ed. Sinauer Associates, Sunderland, MA.
    • (2003)
    • Swofford, D.L.1
  • 30
    • 4444298202 scopus 로고    scopus 로고
    • APOBEC3G versus reverse transcriptase in the generation of HIV-1 drug-resistance mutations
    • Berkhout B, de Ronde A. 2004. APOBEC3G versus reverse transcriptase in the generation of HIV-1 drug-resistance mutations. AIDS 18:1861-1863 http://dx.doi.org/10.1097/00002030-200409030-00022.
    • (2004) AIDS , vol.18 , pp. 1861-1863
    • Berkhout, B.1    de Ronde, A.2
  • 31
    • 1242274541 scopus 로고    scopus 로고
    • Unselected mutations in the human immunodeficiency virus type 1 genome are mostly nonsynonymous and often deleterious
    • Gao F, Chen Y, Levy DN, Conway JA, Kepler TB, Hui H. 2004. Unselected mutations in the human immunodeficiency virus type 1 genome are mostly nonsynonymous and often deleterious. J. Virol. 78: 2426-2433. http://dx.doi.org/10.1128/JVI.78.5.2426-2433.2004.
    • (2004) J. Virol. , vol.78 , pp. 2426-2433
    • Gao, F.1    Chen, Y.2    Levy, D.N.3    Conway, J.A.4    Kepler, T.B.5    Hui, H.6
  • 32
    • 0029075130 scopus 로고
    • Lower in vivo mutation rate of human immunodeficiency virus type 1 than that predicted from the fidelity of purified reverse transcriptase
    • Mansky LM, Temin HM. 1995. Lower in vivo mutation rate of human immunodeficiency virus type 1 than that predicted from the fidelity of purified reverse transcriptase. J. Virol. 69:5087-5094.
    • (1995) J. Virol. , vol.69 , pp. 5087-5094
    • Mansky, L.M.1    Temin, H.M.2
  • 33
    • 0025059896 scopus 로고
    • Selection against CpG dinucleotides in lentiviral genes: a possible role of methylation in regulation of viral expression
    • Shpaer EG, Mullins JI. 1990. Selection against CpG dinucleotides in lentiviral genes: a possible role of methylation in regulation of viral expression. Nucleic Acids Res. 18:5793-5797. http://dx.doi.org/10.1093/nar/18.19.5793.
    • (1990) Nucleic Acids Res. , vol.18 , pp. 5793-5797
    • Shpaer, E.G.1    Mullins, J.I.2
  • 34
  • 36
    • 36048934237 scopus 로고    scopus 로고
    • Target cell APOBEC3C can induce limited G-to-A mutation in HIV-1
    • Bourara K, Liegler TJ, Grant RM. 2007. Target cell APOBEC3C can induce limited G-to-A mutation in HIV-1. PLoS Pathog. 3:1477-1485. http://dx.doi.org/10.1371/journal.ppat.0030153.
    • (2007) PLoS Pathog. , vol.3 , pp. 1477-1485
    • Bourara, K.1    Liegler, T.J.2    Grant, R.M.3
  • 37
    • 58149374613 scopus 로고    scopus 로고
    • Polymorphisms and splice variants influence the antiretroviral activity of human APOBEC3H
    • Harari A, Ooms M, Mulder LC, Simon V. 2009. Polymorphisms and splice variants influence the antiretroviral activity of human APOBEC3H. J. Virol. 83:295-303. http://dx.doi.org/10.1128/JVI.01665-08.
    • (2009) J. Virol. , vol.83 , pp. 295-303
    • Harari, A.1    Ooms, M.2    Mulder, L.C.3    Simon, V.4
  • 38
    • 84855161368 scopus 로고    scopus 로고
    • Target cell-mediated editing of HIV-1 cDNA by APOBEC3 proteins in human macrophages
    • Koning FA, Goujon C, Bauby H, Malim MH. 2011. Target cell-mediated editing of HIV-1 cDNA by APOBEC3 proteins in human macrophages. J. Virol. 85:13448-13452. http://dx.doi.org/10.1128/JVI.00775-11.
    • (2011) J. Virol. , vol.85 , pp. 13448-13452
    • Koning, F.A.1    Goujon, C.2    Bauby, H.3    Malim, M.H.4
  • 39
    • 84865791616 scopus 로고    scopus 로고
    • Biochemical analysis of hypermutation by the deoxycytidine deaminase APOBEC3A
    • Love RP, Xu H, Chelico L. 2012. Biochemical analysis of hypermutation by the deoxycytidine deaminase APOBEC3A. J. Biol. Chem. 287:30812-30822 http://dx.doi.org/10.1074/jbc.M112.393181.
    • (2012) J. Biol. Chem. , vol.287 , pp. 30812-30822
    • Love, R.P.1    Xu, H.2    Chelico, L.3
  • 40
    • 37849030910 scopus 로고    scopus 로고
    • Human immunodeficiency virus type 1 Vif functionally interacts with diverse APOBEC3 cytidine deaminases and moves with them between cytoplasmic sites of mRNA metabolism
    • Marin M, Golem S, Rose KM, Kozak SL, Kabat D. 2008. Human immunodeficiency virus type 1 Vif functionally interacts with diverse APOBEC3 cytidine deaminases and moves with them between cytoplasmic sites of mRNA metabolism. J. Virol. 82:987-998. http://dx.doi.org/10.1128/JVI.01078-07.
    • (2008) J. Virol. , vol.82 , pp. 987-998
    • Marin, M.1    Golem, S.2    Rose, K.M.3    Kozak, S.L.4    Kabat, D.5
  • 41
    • 84864576348 scopus 로고    scopus 로고
    • Endogenous origins of HIV-1 G-to-A hypermutation and restriction in the nonpermissive T cell line CEM2n
    • Refsland EW, Hultquist JF, Harris RS. 2012. Endogenous origins of HIV-1 G-to-A hypermutation and restriction in the nonpermissive T cell line CEM2n. PLoS Pathog. 8:e1002800. http://dx.doi.org/10.1371/journal.ppat.1002800.
    • (2012) PLoS Pathog. , vol.8
    • Refsland, E.W.1    Hultquist, J.F.2    Harris, R.S.3
  • 42
    • 79952611071 scopus 로고    scopus 로고
    • Analysis of human APOBEC3H haplotypes and anti-human immunodeficiency virus type 1 activity
    • Wang X, Abudu A, Son S, Dang Y, Venta PJ, Zheng YH. 2011. Analysis of human APOBEC3H haplotypes and anti-human immunodeficiency virus type 1 activity. J. Virol. 85:3142-3152. http://dx.doi.org/10.1128/JVI.02049-10.
    • (2011) J. Virol. , vol.85 , pp. 3142-3152
    • Wang, X.1    Abudu, A.2    Son, S.3    Dang, Y.4    Venta, P.J.5    Zheng, Y.H.6
  • 43
    • 17144432313 scopus 로고    scopus 로고
    • Mutational comparison of the single-domained APOBEC3C and double-domained APOBEC3F/G anti-retroviral cytidine deaminases provides insight into their DNA target site specificities
    • Langlois MA, Beale RC, Conticello SG, Neuberger MS. 2005. Mutational comparison of the single-domained APOBEC3C and double-domained APOBEC3F/G anti-retroviral cytidine deaminases provides insight into their DNA target site specificities. Nucleic Acids Res. 33:1913-1923. http: //dx.doi.org/10.1093/nar/gki343.
    • (2005) Nucleic Acids Res. , vol.33 , pp. 1913-1923
    • Langlois, M.A.1    Beale, R.C.2    Conticello, S.G.3    Neuberger, M.S.4
  • 44
    • 4143071549 scopus 로고    scopus 로고
    • APOBEC3F properties and hypermutation preferences indicate activity against HIV-1 in vivo
    • Liddament MT, Brown WL, Schumacher AJ, Harris RS. 2004. APOBEC3F properties and hypermutation preferences indicate activity against HIV-1 in vivo. Curr. Biol. 14:1385-1391. http://dx.doi.org/10.1016/j.cub.2004.06.050.
    • (2004) Curr. Biol. , vol.14 , pp. 1385-1391
    • Liddament, M.T.1    Brown, W.L.2    Schumacher, A.J.3    Harris, R.S.4
  • 46
    • 34347371436 scopus 로고    scopus 로고
    • Myeloid differentiation and susceptibility to HIV-1 are linked to APOBEC3 expression
    • Peng G, Greenwell-Wild T, Nares S, Jin W, Lei KJ, Rangel ZG, Munson PJ, Wahl SM. 2007. Myeloid differentiation and susceptibility to HIV-1 are linked to APOBEC3 expression. Blood 110:393-400. http://dx.doi.org /10.1182/blood-2006-10-051763.
    • (2007) Blood , vol.110 , pp. 393-400
    • Peng, G.1    Greenwell-Wild, T.2    Nares, S.3    Jin, W.4    Lei, K.J.5    Rangel, Z.G.6    Munson, P.J.7    Wahl, S.M.8
  • 48
    • 35448976039 scopus 로고    scopus 로고
    • Targeting APOBEC3A to the viral nucleoprotein complex confers antiviral activity
    • Goila-Gaur R, Khan MA, Miyagi E, Kao S, Strebel K. 2007. Targeting APOBEC3A to the viral nucleoprotein complex confers antiviral activity. Retrovirology 4:61. http://dx.doi.org/10.1186/1742-4690-4-61.
    • (2007) Retrovirology , vol.4 , pp. 61
    • Goila-Gaur, R.1    Khan, M.A.2    Miyagi, E.3    Kao, S.4    Strebel, K.5
  • 51
    • 23844483541 scopus 로고    scopus 로고
    • Human APOBEC3B is a potent inhibitor of HIV-1 infectivity and is resistant to HIV-1 Vif
    • Doehle BP, Schafer A, Cullen BR. 2005. Human APOBEC3B is a potent inhibitor of HIV-1 infectivity and is resistant to HIV-1 Vif. Virology 339: 281-288. http://dx.doi.org/10.1016/j.virol.2005.06.005.
    • (2005) Virology , vol.339 , pp. 281-288
    • Doehle, B.P.1    Schafer, A.2    Cullen, B.R.3
  • 52
    • 33750344250 scopus 로고    scopus 로고
    • Identification of APOBEC3DE as another antiretroviral factor from the human APOBEC family
    • Dang Y, Wang X, Esselman WJ, Zheng YH. 2006. Identification of APOBEC3DE as another antiretroviral factor from the human APOBEC family. J. Virol. 80:10522-10533. http://dx.doi.org/10.1128/JVI.01123-06.
    • (2006) J. Virol. , vol.80 , pp. 10522-10533
    • Dang, Y.1    Wang, X.2    Esselman, W.J.3    Zheng, Y.H.4
  • 53
    • 80055105950 scopus 로고    scopus 로고
    • Human and rhesus APOBEC3D, APOBEC3F, APOBEC3G, and APOBEC3H demonstrate a conserved capacity to restrict Vif-deficient HIV-1
    • Hultquist JF, Lengyel JA, Refsland EW, LaRue RS, Lackey L, Brown WL, Harris RS. 2011. Human and rhesus APOBEC3D, APOBEC3F, APOBEC3G, and APOBEC3H demonstrate a conserved capacity to restrict Vif-deficient HIV-1. J. Virol. 85:11220-11234. http://dx.doi.org/10.1128/JVI.05238-11.
    • (2011) J. Virol. , vol.85 , pp. 11220-11234
    • Hultquist, J.F.1    Lengyel, J.A.2    Refsland, E.W.3    LaRue, R.S.4    Lackey, L.5    Brown, W.L.6    Harris, R.S.7
  • 54
    • 79952611071 scopus 로고    scopus 로고
    • Analysis of human APOBEC3H haplotypes and anti-human immunodeficiency virus type 1 activity
    • Wang X, Abudu A, Son S, Dang Y, Venta PJ, Zheng YH. 2011. Analysis of human APOBEC3H haplotypes and anti-human immunodeficiency virus type 1 activity. J. Virol. 85:3142-3152. http://dx.doi.org/10.1128/JVI.02049-10.
    • (2011) J. Virol. , vol.85 , pp. 3142-3152
    • Wang, X.1    Abudu, A.2    Son, S.3    Dang, Y.4    Venta, P.J.5    Zheng, Y.H.6
  • 56
    • 80052297057 scopus 로고    scopus 로고
    • APOBEC3 has not left an evolutionary footprint on the HIV-1 genome
    • Ebrahimi D, Anwar F, Davenport MP. 2011. APOBEC3 has not left an evolutionary footprint on the HIV-1 genome. J. Virol. 85:9139-9146. http://dx.doi.org/10.1128/JVI.00658-11.
    • (2011) J. Virol. , vol.85 , pp. 9139-9146
    • Ebrahimi, D.1    Anwar, F.2    Davenport, M.P.3
  • 57
    • 13744255000 scopus 로고    scopus 로고
    • G→A hypermutation in protease and reverse transcriptase regions of human immunodeficiency virus type 1 residing in resting CD4+ T cells in vivo
    • Kieffer TL, Kwon P, Nettles RE, Han Y, Ray SC, Siliciano RF. 2005. G→A hypermutation in protease and reverse transcriptase regions of human immunodeficiency virus type 1 residing in resting CD4+ T cells in vivo. J. Virol. 79:1975-1980. http://dx.doi.org/10.1128/JVI.79.3.1975-1980.2005.
    • (2005) J. Virol. , vol.79 , pp. 1975-1980
    • Kieffer, T.L.1    Kwon, P.2    Nettles, R.E.3    Han, Y.4    Ray, S.C.5    Siliciano, R.F.6
  • 59
    • 77956828453 scopus 로고    scopus 로고
    • Human APOBEC3G-mediated editing can promote HIV-1 sequence diversification and accelerate adaptation to selective pressure
    • Kim EY, Bhattacharya T, Kunstman K, Swantek P, Koning FA, Malim MH, Wolinsky SM. 2010. Human APOBEC3G-mediated editing can promote HIV-1 sequence diversification and accelerate adaptation to selective pressure. J. Virol. 84:10402-10405. http://dx.doi.org/10.1128/JVI.01223-10.
    • (2010) J. Virol. , vol.84 , pp. 10402-10405
    • Kim, E.Y.1    Bhattacharya, T.2    Kunstman, K.3    Swantek, P.4    Koning, F.A.5    Malim, M.H.6    Wolinsky, S.M.7
  • 60
    • 44449093971 scopus 로고    scopus 로고
    • Cytidine deamination induced HIV-1 drug resistance
    • Mulder LC, Harari A, Simon V. 2008. Cytidine deamination induced HIV-1 drug resistance. Proc. Natl. Acad. Sci. U. S. A. 105:5501-5506. http: //dx.doi.org/10.1073/pnas.0710190105.
    • (2008) Proc. Natl. Acad. Sci. U. S. A. , vol.105 , pp. 5501-5506
    • Mulder, L.C.1    Harari, A.2    Simon, V.3
  • 61
    • 77953769689 scopus 로고    scopus 로고
    • APOBEC3G contributes to HIV-1 variation through sublethal mutagenesis
    • Sadler HA, Stenglein MD, Harris RS, Mansky LM. 2010. APOBEC3G contributes to HIV-1 variation through sublethal mutagenesis. J. Virol. 84:7396-7404. http://dx.doi.org/10.1128/JVI.00056-10.
    • (2010) J. Virol. , vol.84 , pp. 7396-7404
    • Sadler, H.A.1    Stenglein, M.D.2    Harris, R.S.3    Mansky, L.M.4
  • 62
    • 0037340618 scopus 로고    scopus 로고
    • Relative anti-HIV-1 efficacy of lamivudine and emtricitabine in vitro is dependent on cell type
    • Hazen R, Lanier ER. 2003. Relative anti-HIV-1 efficacy of lamivudine and emtricitabine in vitro is dependent on cell type. J. Acquir. Immune Defic. Syndr. 32:255-258. http://dx.doi.org/10.1097/00126334-200303010-00003.
    • (2003) J. Acquir. Immune Defic. Syndr. , vol.32 , pp. 255-258
    • Hazen, R.1    Lanier, E.R.2
  • 64
    • 0037110745 scopus 로고    scopus 로고
    • Impaired 2',3'-dideoxy-3'-thiacytidine accumulation in T-lymphoblastoid cells as a mechanism of acquired resistance independent of multidrug resistant protein 4 with a possible role for ATP-binding cassette C11
    • Turriziani O, Schuetz JD, Focher F, Scagnolari C, Sampath J, Adachi M, Bambacioni F, Riva E, Antonelli G. 2002. Impaired 2',3'-dideoxy-3'-thiacytidine accumulation in T-lymphoblastoid cells as a mechanism of acquired resistance independent of multidrug resistant protein 4 with a possible role for ATP-binding cassette C11. Biochem. J. 368:325-332. http://dx.doi.org/10.1042/BJ20020494.
    • (2002) Biochem. J. , vol.368 , pp. 325-332
    • Turriziani, O.1    Schuetz, J.D.2    Focher, F.3    Scagnolari, C.4    Sampath, J.5    Adachi, M.6    Bambacioni, F.7    Riva, E.8    Antonelli, G.9
  • 66
    • 0038730672 scopus 로고    scopus 로고
    • Mechanism of inhibition of T-acute lymphoblastic leukemia cells by PNP inhibitor-BCX-1777
    • Bantia S, Ananth SL, Parker CD, Horn LL, Upshaw R. 2003. Mechanism of inhibition of T-acute lymphoblastic leukemia cells by PNP inhibitor-BCX-1777. Int. Immunopharmacol. 3:879-887. http://dx.doi.org/10.1016/S1567-5769(03)00076-6.
    • (2003) Int. Immunopharmacol. , vol.3 , pp. 879-887
    • Bantia, S.1    Ananth, S.L.2    Parker, C.D.3    Horn, L.L.4    Upshaw, R.5
  • 67
    • 0027946446 scopus 로고
    • Hypermutagenesis of RNA using human immunodeficiency virus type 1 reverse transcriptase and biased dNTP concentrations
    • Martinez MA, Vartanian JP, Wain-Hobson S. 1994. Hypermutagenesis of RNA using human immunodeficiency virus type 1 reverse transcriptase and biased dNTP concentrations. Proc. Natl. Acad. Sci. U. S. A. 91:11787-11791 http://dx.doi.org/10.1073/pnas.91.25.11787.
    • (1994) Proc. Natl. Acad. Sci. U. S. A. , vol.91 , pp. 11787-11791
    • Martinez, M.A.1    Vartanian, J.P.2    Wain-Hobson, S.3
  • 69
  • 70
    • 79956105749 scopus 로고    scopus 로고
    • Identification of a single amino acid required for APOBEC3 antiretroviral cytidine deaminase activity
    • Dang Y, Abudu A, Son S, Harjes E, Spearman P, Matsuo H, Zheng YH. 2011 Identification of a single amino acid required for APOBEC3 antiretroviral cytidine deaminase activity. J. Virol. 85:5691-5695. http://dx.doi.org/10.1128/JVI.00243-11.
    • (2011) J. Virol. , vol.85 , pp. 5691-5695
    • Dang, Y.1    Abudu, A.2    Son, S.3    Harjes, E.4    Spearman, P.5    Matsuo, H.6    Zheng, Y.H.7
  • 72
    • 48449104748 scopus 로고    scopus 로고
    • Characterization of conserved motifs in HIV-1 Vif required for APOBEC3G and APOBEC3F interaction
    • He Z, Zhang W, Chen G, Xu R, Yu XF. 2008. Characterization of conserved motifs in HIV-1 Vif required for APOBEC3G and APOBEC3F interaction. J. Mol. Biol. 381:1000-1011. http://dx.doi.org/10.1016/j.jmb.2008.06.061.
    • (2008) J. Mol. Biol. , vol.381 , pp. 1000-1011
    • He, Z.1    Zhang, W.2    Chen, G.3    Xu, R.4    Yu, X.F.5
  • 73
    • 60049098639 scopus 로고    scopus 로고
    • Regulation of APOBEC3 proteins by a novel YXXL motif in human immunodeficiency virus type 1 Vif and simian immunodeficiency virus SIVagm Vif
    • Pery E, Rajendran KS, Brazier AJ, Gabuzda D. 2009. Regulation of APOBEC3 proteins by a novel YXXL motif in human immunodeficiency virus type 1 Vif and simian immunodeficiency virus SIVagm Vif. J. Virol. 83:2374-2381. http://dx.doi.org/10.1128/JVI.01898-08.
    • (2009) J. Virol. , vol.83 , pp. 2374-2381
    • Pery, E.1    Rajendran, K.S.2    Brazier, A.J.3    Gabuzda, D.4
  • 74
    • 34547119261 scopus 로고    scopus 로고
    • Identification of two distinct human immunodeficiency virus type 1 Vif determinants critical for interactions with human APOBEC3G and APOBEC3F
    • Russell RA, Pathak VK. 2007. Identification of two distinct human immunodeficiency virus type 1 Vif determinants critical for interactions with human APOBEC3G and APOBEC3F. J. Virol. 81:8201-8210. http://dx.doi.org/10.1128/JVI.00395-07.
    • (2007) J. Virol. , vol.81 , pp. 8201-8210
    • Russell, R.A.1    Pathak, V.K.2
  • 75
    • 59649118427 scopus 로고    scopus 로고
    • Distinct domains within APOBEC3G and APOBEC3F interact with separate regions of human immunodeficiency virus type 1 Vif
    • Russell RA, Smith J, Barr R, Bhattacharyya D, Pathak VK. 2009. Distinct domains within APOBEC3G and APOBEC3F interact with separate regions of human immunodeficiency virus type 1 Vif. J. Virol. 83: 1992-2003. http://dx.doi.org/10.1128/JVI.01621-08.
    • (2009) J. Virol. , vol.83 , pp. 1992-2003
    • Russell, R.A.1    Smith, J.2    Barr, R.3    Bhattacharyya, D.4    Pathak, V.K.5
  • 76
    • 58049217469 scopus 로고    scopus 로고
    • Distinct determinants in HIV-1 Vif and human APOBEC3 proteins are required for the suppression of diverse host anti-viral proteins
    • Zhang W, Chen G, Niewiadomska AM, Xu R, Yu XF. 2008. Distinct determinants in HIV-1 Vif and human APOBEC3 proteins are required for the suppression of diverse host anti-viral proteins. PLoS One 3:e3963. http://dx.doi.org/10.1371/journal.pone.0003963.
    • (2008) PLoS One , vol.3
    • Zhang, W.1    Chen, G.2    Niewiadomska, A.M.3    Xu, R.4    Yu, X.F.5
  • 77
    • 77956848635 scopus 로고    scopus 로고
    • Longterm restriction by APOBEC3F selects human immunodeficiency virus type 1 variants with restored Vif function
    • Albin JS, Hache G, Hultquist JF, Brown WL, Harris RS. 2010. Longterm restriction by APOBEC3F selects human immunodeficiency virus type 1 variants with restored Vif function. J. Virol. 84:10209-10219. http: //dx.doi.org/10.1128/JVI.00632-10.
    • (2010) J. Virol. , vol.84 , pp. 10209-10219
    • Albin, J.S.1    Hache, G.2    Hultquist, J.F.3    Brown, W.L.4    Harris, R.S.5
  • 79
    • 48249102331 scopus 로고    scopus 로고
    • APOBEC3G and APOBEC3F require an endogenous cofactor to block HIV-1 replication
    • Han Y, Wang X, Dang Y, Zheng YH. 2008. APOBEC3G and APOBEC3F require an endogenous cofactor to block HIV-1 replication. PLoS Pathog. 4:e1000095. http://dx.doi.org/10.1371/journal.ppat.1000095.
    • (2008) PLoS Pathog. , vol.4
    • Han, Y.1    Wang, X.2    Dang, Y.3    Zheng, Y.H.4
  • 80
    • 84897405060 scopus 로고    scopus 로고
    • Different mutagenic potential of HIV-1 restriction factors APOBEC3G and APOBEC3F is determined by distinct single-stranded DNA scanning mechanisms
    • Ara A, Love R, Chelico L. 2014. Different mutagenic potential of HIV-1 restriction factors APOBEC3G and APOBEC3F is determined by distinct single-stranded DNA scanning mechanisms. PLoS Pathog. 10:e1004024. http://dx.doi.org/10.1371/journal.ppat.1004024.
    • (2014) PLoS Pathog. , vol.10
    • Ara, A.1    Love, R.2    Chelico, L.3
  • 82
    • 23844483865 scopus 로고    scopus 로고
    • APOBEC3G/CEM15 (hA3G) mRNA levels associate inversely with human immunodeficiency virus viremia
    • Jin X, Brooks A, Chen H, Bennett R, Reichman R, Smith H. 2005. APOBEC3G/CEM15 (hA3G) mRNA levels associate inversely with human immunodeficiency virus viremia. J. Virol. 79:11513-11516. http://dx.doi.org/10.1128/JVI.79.17.11513-11516.2005.
    • (2005) J. Virol. , vol.79 , pp. 11513-11516
    • Jin, X.1    Brooks, A.2    Chen, H.3    Bennett, R.4    Reichman, R.5    Smith, H.6
  • 83
    • 84861797295 scopus 로고    scopus 로고
    • APOBEC3G expression and hypermutation are inversely associated with human immunodeficiency virus type 1 (HIV-1) burden in vivo
    • Kourteva Y, De Pasquale M, Allos T, McMunn C, D' Aquila RT. 2012. APOBEC3G expression and hypermutation are inversely associated with human immunodeficiency virus type 1 (HIV-1) burden in vivo. Virology 430:1-9. http://dx.doi.org/10.1016/j.virol.2012.03.018.
    • (2012) Virology , vol.430 , pp. 1-9
    • Kourteva, Y.1    De Pasquale, M.2    Allos, T.3    McMunn, C.4    D' Aquila, R.T.5
  • 84
    • 48749099260 scopus 로고    scopus 로고
    • Relationship between human immunodeficiency type 1 infection and expression of human APOBEC3G and APOBEC3F
    • Ulenga NK, Sarr AD, Thakore-Meloni S, Sankale JL, Eisen G, Kanki PJ. 2008 Relationship between human immunodeficiency type 1 infection and expression of human APOBEC3G and APOBEC3F. J. Infect. Dis. 198:486-492. http://dx.doi.org/10.1086/590212.
    • (2008) J. Infect. Dis. , vol.198 , pp. 486-492
    • Ulenga, N.K.1    Sarr, A.D.2    Thakore-Meloni, S.3    Sankale, J.L.4    Eisen, G.5    Kanki, P.J.6
  • 85
    • 63549121125 scopus 로고    scopus 로고
    • APOBEC3G mRNA expression in exposed seronegative and early stage HIV infected individuals decreases with removal of exposure and with disease progression
    • Vazquez-Perez JA, Ormsby CE, Hernandez-Juan R, Torres KJ, Reyes-Teran G. 2009. APOBEC3G mRNA expression in exposed seronegative and early stage HIV infected individuals decreases with removal of exposure and with disease progression. Retrovirology 6:23. http://dx.doi.org /10.1186/1742-4690-6-23.
    • (2009) Retrovirology , vol.6 , pp. 23
    • Vazquez-Perez, J.A.1    Ormsby, C.E.2    Hernandez-Juan, R.3    Torres, K.J.4    Reyes-Teran, G.5
  • 87
    • 84858958569 scopus 로고    scopus 로고
    • Expression analysis of LEDGF/p75, APOBEC3G, TRIM5alpha, and tetherin in a Senegalese cohort of HIV-1-exposed seronegative individuals
    • Mous K, Jennes W, Camara M, Seydi M, Daneau G, Mboup S, Kestens L, Van Ostade X. 2012. Expression analysis of LEDGF/p75, APOBEC3G, TRIM5alpha, and tetherin in a Senegalese cohort of HIV-1-exposed seronegative individuals. PLoS One 7:e33934. http://dx.doi.org/10.1371 /journal.pone.0033934.
    • (2012) PLoS One , vol.7
    • Mous, K.1    Jennes, W.2    Camara, M.3    Seydi, M.4    Daneau, G.5    Mboup, S.6    Kestens, L.7    Van Ostade, X.8
  • 88
    • 69449103867 scopus 로고    scopus 로고
    • Defining APOBEC3 expression patterns in human tissues and hematopoietic cell subsets
    • Koning FA, Newman EN, Kim EY, Kunstman KJ, Wolinsky SM, Malim MH. 2009. Defining APOBEC3 expression patterns in human tissues and hematopoietic cell subsets. J. Virol. 83:9474-9485. http://dx.doi.org/10.1128/JVI.01089-09.
    • (2009) J. Virol. , vol.83 , pp. 9474-9485
    • Koning, F.A.1    Newman, E.N.2    Kim, E.Y.3    Kunstman, K.J.4    Wolinsky, S.M.5    Malim, M.H.6
  • 89
    • 77955004656 scopus 로고    scopus 로고
    • Quantitative profiling of the full APOBEC3 mRNA repertoire in lymphocytes and tissues: implications for HIV-1 restriction
    • Refsland EW, Stenglein MD, Shindo K, Albin JS, Brown WL, Harris RS. 2010 Quantitative profiling of the full APOBEC3 mRNA repertoire in lymphocytes and tissues: implications for HIV-1 restriction. Nucleic Acids Res. 38:4274-4284. http://dx.doi.org/10.1093/nar/gkq174.
    • (2010) Nucleic Acids Res. , vol.38 , pp. 4274-4284
    • Refsland, E.W.1    Stenglein, M.D.2    Shindo, K.3    Albin, J.S.4    Brown, W.L.5    Harris, R.S.6
  • 90
    • 77951441141 scopus 로고    scopus 로고
    • APOBEC3F and APOBEC3G inhibit HIV-1 DNA integration by different mechanisms
    • Mbisa JL, Bu W, Pathak VK. 2010. APOBEC3F and APOBEC3G inhibit HIV-1 DNA integration by different mechanisms. J. Virol. 84:5250-5259. http://dx.doi.org/10.1128/JVI.02358-09.
    • (2010) J. Virol. , vol.84 , pp. 5250-5259
    • Mbisa, J.L.1    Bu, W.2    Pathak, V.K.3
  • 91
    • 84871202625 scopus 로고    scopus 로고
    • APOBEC3G and APOBEC3F rarely co-mutate the same HIV genome
    • Ebrahimi D, Anwar F, Davenport MP. 2012. APOBEC3G and APOBEC3F rarely co-mutate the same HIV genome. Retrovirology 9:113. http://dx.doi.org/10.1186/1742-4690-9-113.
    • (2012) Retrovirology , vol.9 , pp. 113
    • Ebrahimi, D.1    Anwar, F.2    Davenport, M.P.3
  • 92
    • 0036729032 scopus 로고    scopus 로고
    • Cytotoxic T-lymphocyte (CTL) responses directed against regulatory and accessory proteins in HIV-1 infection
    • Addo MM, Yu XG, Rosenberg ES, Walker BD, Altfeld M. 2002. Cytotoxic T-lymphocyte (CTL) responses directed against regulatory and accessory proteins in HIV-1 infection.DNACell Biol. 21:671-678. http://dx.doi.org/10.1089/104454902760330219.
    • (2002) DNACell Biol. , vol.21 , pp. 671-678
    • Addo, M.M.1    Yu, X.G.2    Rosenberg, E.S.3    Walker, B.D.4    Altfeld, M.5
  • 96
    • 0036784572 scopus 로고    scopus 로고
    • Magnitude and frequency of cytotoxic T-lymphocyte responses: identification of immunodominant regions of human immunodeficiency virus type 1 subtype C
    • Novitsky V, Cao H, Rybak N, Gilbert P, McLane MF, Gaolekwe S, Peter T, Thior I, Ndung' u T, Marlink R, Lee TH, Essex M. 2002. Magnitude and frequency of cytotoxic T-lymphocyte responses: identification of immunodominant regions of human immunodeficiency virus type 1 subtype C. J. Virol. 76:10155-10168. http://dx.doi.org/10.1128/JVI.76.20.10155-10168.2002.
    • (2002) J. Virol. , vol.76 , pp. 10155-10168
    • Novitsky, V.1    Cao, H.2    Rybak, N.3    Gilbert, P.4    McLane, M.F.5    Gaolekwe, S.6    Peter, T.7    Thior, I.8    Ndung' u, T.9    Marlink, R.10    Lee, T.H.11    Essex, M.12
  • 98
    • 14744292575 scopus 로고    scopus 로고
    • Regulatory and accessory HIV-1 proteins: potential targets for HIV-1 vaccines?
    • Yu XG, Lichterfeld M, Addo MM, Altfeld M. 2005. Regulatory and accessory HIV-1 proteins: potential targets for HIV-1 vaccines? Curr. Med. Chem. 12:741-747. http://dx.doi.org/10.2174/0929867053202205.
    • (2005) Curr. Med. Chem. , vol.12 , pp. 741-747
    • Yu, X.G.1    Lichterfeld, M.2    Addo, M.M.3    Altfeld, M.4
  • 99
    • 84880571461 scopus 로고    scopus 로고
    • HIV-1 subtype variability in Vif derived from molecular clones affects APOBEC3G-mediated host restriction
    • Lisovsky I, Schader SM, Sloan RD, Oliveira M, Coutsinos D, Bernard NF, Wainberg MA. 2013. HIV-1 subtype variability in Vif derived from molecular clones affects APOBEC3G-mediated host restriction. Intervirology 56:258-264. http://dx.doi.org/10.1159/000348513.
    • (2013) Intervirology , vol.56 , pp. 258-264
    • Lisovsky, I.1    Schader, S.M.2    Sloan, R.D.3    Oliveira, M.4    Coutsinos, D.5    Bernard, N.F.6    Wainberg, M.A.7
  • 100
    • 76149113235 scopus 로고    scopus 로고
    • The antiviral factor APOBEC3G improves CTL recognition of cultured HIV-infected T cells
    • Casartelli N, Guivel-Benhassine F, Bouziat R, Brandler S, Schwartz O, Moris A. 2010. The antiviral factor APOBEC3G improves CTL recognition of cultured HIV-infected T cells. J. Exp. Med. 207:39-49. http://dx.doi.org/10.1084/jem.20091933.
    • (2010) J. Exp. Med. , vol.207 , pp. 39-49
    • Casartelli, N.1    Guivel-Benhassine, F.2    Bouziat, R.3    Brandler, S.4    Schwartz, O.5    Moris, A.6


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