Estimating the relative contribution of dNTP pool imbalance and APOBEC3G/3F editing to HIV evolution in vivo

Journal of Computational Biology

Volumn 14, Issue 8, 2007, Pages 1105-1114

  Deforche, Koen ^a   Camacho, Ricardo ^b   Laethem, Kristel Van ^a   Shapiro, Beth ^c   Moreau, Yves ^a   Rambaut, Andrew ^d   Vandamme, Anne Mieke ^a   Lemey, Philippe ^c  

^a REGA INSTITUTE FOR MEDICAL RESEARCH   (Belgium)

^b Centro Hospitalar de Lisboa Ocidental   (Portugal)

^c UNIVERSITY OF OXFORD   (United Kingdom)

^d UNIVERSITY OF EDINBURGH   (United Kingdom)

Author keywords

Algorithms; Evolution; Sequence analysis; Viruses

Indexed keywords

ADENINE; CPG OLIGODEOXYNUCLEOTIDE; GUANINE; NUCLEOTIDE;

ALGORITHM; AMINO ACID SEQUENCE; ARTICLE; GENOME; HUMAN IMMUNODEFICIENCY VIRUS; HUMAN IMMUNODEFICIENCY VIRUS 1; MATHEMATICAL COMPUTING; MUTATION; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; REVERSE TRANSCRIPTION; SEQUENCE ANALYSIS;

ALGORITHMS; COMPUTATIONAL BIOLOGY; CYTIDINE DEAMINASE; CYTOSINE DEAMINASE; DEOXYRIBONUCLEOTIDES; DNA, VIRAL; EVOLUTION, MOLECULAR; HIV; HIV INFECTIONS; HUMANS; LIKELIHOOD FUNCTIONS; MARKOV CHAINS; MODELS, BIOLOGICAL; MONTE CARLO METHOD; MUTATION; RNA EDITING;

HUMAN IMMUNODEFICIENCY VIRUS;

EID: 35948973926     PISSN: 10665277     EISSN: None     Source Type: Journal    
DOI: 10.1089/cmb.2007.0073     Document Type: Article

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