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Volumn 9, Issue , 2012, Pages

APOBEC3G and APOBEC3F rarely co-mutate the same HIV genome

Author keywords

APOBEC3F; APOBEC3G; G to A mutation signature; Hypermutated HIV; Motif representation

Indexed keywords

APOLIPOPROTEIN B MESSENGER RNA EDITING ENZYME CATALYTIC POLYPEPTIDE 3F; APOLIPOPROTEIN B MESSENGER RNA EDITING ENZYME CATALYTIC POLYPEPTIDE 3G;

EID: 84871202625     PISSN: None     EISSN: 17424690     Source Type: Journal    
DOI: 10.1186/1742-4690-9-113     Document Type: Article
Times cited : (17)

References (25)
  • 1
    • 8544241736 scopus 로고    scopus 로고
    • Retroviral restriction by APOBEC proteins
    • Harris RS, Liddament MT. Retroviral restriction by APOBEC proteins. Nat Rev Immunol 2004, 4:868-877.
    • (2004) Nat Rev Immunol , vol.4 , pp. 868-877
    • Harris, R.S.1    Liddament, M.T.2
  • 2
    • 19344362934 scopus 로고    scopus 로고
    • Ancient adaptive evolution of the primate antiviral DNA-editing enzyme APOBEC3G
    • Sawyer SL, Emerman M, Malik HS. Ancient adaptive evolution of the primate antiviral DNA-editing enzyme APOBEC3G. PLoS Biol 2004, 2:1278-1285.
    • (2004) PLoS Biol , vol.2 , pp. 1278-1285
    • Sawyer, S.L.1    Emerman, M.2    Malik, H.S.3
  • 4
    • 64849104502 scopus 로고    scopus 로고
    • Restriction of HIV-1 by APOBEC3G is cytidine deaminase-dependent
    • Browne EP, Allers C, Landau NR. Restriction of HIV-1 by APOBEC3G is cytidine deaminase-dependent. Virology 2009, 387:313-321.
    • (2009) Virology , vol.387 , pp. 313-321
    • Browne, E.P.1    Allers, C.2    Landau, N.R.3
  • 5
    • 33847636341 scopus 로고    scopus 로고
    • APOBEC-mediated viral restriction: not simply editing?
    • Holmes RK, Malim MH, Bishop KN. APOBEC-mediated viral restriction: not simply editing?. Trends Biochem Sci 2007, 32:118-128.
    • (2007) Trends Biochem Sci , vol.32 , pp. 118-128
    • Holmes, R.K.1    Malim, M.H.2    Bishop, K.N.3
  • 9
    • 0036009548 scopus 로고    scopus 로고
    • Sustained G->A hypermutation during reverse transcription of an entire human immunodeficiency virus type 1 strain Vau group O genome
    • Vartanian JP, Henry M, Wain-Hobson S. Sustained G->A hypermutation during reverse transcription of an entire human immunodeficiency virus type 1 strain Vau group O genome. J Gen Virol 2002, 83:801-805.
    • (2002) J Gen Virol , vol.83 , pp. 801-805
    • Vartanian, J.P.1    Henry, M.2    Wain-Hobson, S.3
  • 10
    • 3242712200 scopus 로고    scopus 로고
    • A second human antiretroviral factor, APOBEC3F, is suppressed by the HIV-1 and HIV-2 Vif proteins
    • Wiegand HL, Doehle BP, Bogerd HP, Cullen BR. A second human antiretroviral factor, APOBEC3F, is suppressed by the HIV-1 and HIV-2 Vif proteins. EMBO J 2004, 23:2451-2458.
    • (2004) EMBO J , vol.23 , pp. 2451-2458
    • Wiegand, H.L.1    Doehle, B.P.2    Bogerd, H.P.3    Cullen, B.R.4
  • 11
    • 4143071549 scopus 로고    scopus 로고
    • APOBEC3F properties and hypermutation preferences indicate activity against HIV-1 in vivo
    • Liddament MT, Brown WL, Schumacher AJ, Harris RS. APOBEC3F properties and hypermutation preferences indicate activity against HIV-1 in vivo. Curr Biol 2004, 14:1385-1391.
    • (2004) Curr Biol , vol.14 , pp. 1385-1391
    • Liddament, M.T.1    Brown, W.L.2    Schumacher, A.J.3    Harris, R.S.4
  • 12
    • 33646924568 scopus 로고    scopus 로고
    • Human retroviral host restriction factors APOBEC3G and APOBEC3F localize to mRNA processing bodies
    • Wichroski MJ, Robb GB, Rana TM. Human retroviral host restriction factors APOBEC3G and APOBEC3F localize to mRNA processing bodies. PLoS Pathog 2006, 2:374-383.
    • (2006) PLoS Pathog , vol.2 , pp. 374-383
    • Wichroski, M.J.1    Robb, G.B.2    Rana, T.M.3
  • 13
    • 13744255000 scopus 로고    scopus 로고
    • G -> A hypermutation in protease and reverse transcriptase regions of human immunodeficiency virus type 1 residing in resting CD4(+) T cells in vivo
    • Kieffer TL, Kwon P, Nettles RE, Han YF, Ray SC, Siliciano RF. G -> A hypermutation in protease and reverse transcriptase regions of human immunodeficiency virus type 1 residing in resting CD4(+) T cells in vivo. J Virol 2005, 79:1975-1980.
    • (2005) J Virol , vol.79 , pp. 1975-1980
    • Kieffer, T.L.1    Kwon, P.2    Nettles, R.E.3    Han, Y.F.4    Ray, S.C.5    Siliciano, R.F.6
  • 14
    • 49149090397 scopus 로고    scopus 로고
    • Human immunodeficiency virus (HIV) type 1 proviral hypermutation correlates with CD4 count in HIV-infected women from Kenya
    • Land AM, Ball TB, Luo M, Pilon R, Sandstrom P, Embree' JE, Wachihi C, Kimani J, Plummer FA. Human immunodeficiency virus (HIV) type 1 proviral hypermutation correlates with CD4 count in HIV-infected women from Kenya. J Virol 2008, 82:8172-8182.
    • (2008) J Virol , vol.82 , pp. 8172-8182
    • Land, A.M.1    Ball, T.B.2    Luo, M.3    Pilon, R.4    Sandstrom, P.5    Embree', J.E.6    Wachihi, C.7    Kimani, J.8    Plummer, F.A.9
  • 15
    • 67749116433 scopus 로고    scopus 로고
    • Analysis of the Percentage of Human Immunodeficiency Virus Type 1 Sequences That Are Hypermutated and Markers of Disease Progression in a Longitudinal Cohort, Including One Individual with a Partially Defective Vif
    • Piantadosi A, Humes D, Chohan B, McClelland RS, Overbaugh J. Analysis of the Percentage of Human Immunodeficiency Virus Type 1 Sequences That Are Hypermutated and Markers of Disease Progression in a Longitudinal Cohort, Including One Individual with a Partially Defective Vif. J Virol 2009, 83:7805-7814.
    • (2009) J Virol , vol.83 , pp. 7805-7814
    • Piantadosi, A.1    Humes, D.2    Chohan, B.3    McClelland, R.S.4    Overbaugh, J.5
  • 16
    • 33748511879 scopus 로고    scopus 로고
    • Population level analysis of human immunodeficiency virus type 1 hypermutation and its relationship with APOBEC3G and vif genetic variation
    • Pace C, Keller J, Nolan D, James I, Gaudieri S, Moore C, Mallal S. Population level analysis of human immunodeficiency virus type 1 hypermutation and its relationship with APOBEC3G and vif genetic variation. J Virol 2006, 80:9259-9269.
    • (2006) J Virol , vol.80 , pp. 9259-9269
    • Pace, C.1    Keller, J.2    Nolan, D.3    James, I.4    Gaudieri, S.5    Moore, C.6    Mallal, S.7
  • 17
    • 40149092360 scopus 로고    scopus 로고
    • Role of APOBEC3G/F-mediated hypermutation in the control of human immunodeficiency virus type 1 in elite suppressors
    • Gandhi SK, Siliciano JD, Bailey JR, Siliciano RF, Blankson JN. Role of APOBEC3G/F-mediated hypermutation in the control of human immunodeficiency virus type 1 in elite suppressors. J Virol 2008, 82:3125-3130.
    • (2008) J Virol , vol.82 , pp. 3125-3130
    • Gandhi, S.K.1    Siliciano, J.D.2    Bailey, J.R.3    Siliciano, R.F.4    Blankson, J.N.5
  • 18
    • 53849138762 scopus 로고    scopus 로고
    • The Level of APOBEC3G (hA3G)-Related G-to-A Mutations Does Not Correlate with Viral Load in HIV Type 1-Infected Individuals
    • Ulenga NK, Sarr AD, Hamel D, Sankale JL, Mboup S, Kanki PJ. The Level of APOBEC3G (hA3G)-Related G-to-A Mutations Does Not Correlate with Viral Load in HIV Type 1-Infected Individuals. AIDS Res Hum Retroviruses 2008, 24:1285-1290.
    • (2008) AIDS Res Hum Retroviruses , vol.24 , pp. 1285-1290
    • Ulenga, N.K.1    Sarr, A.D.2    Hamel, D.3    Sankale, J.L.4    Mboup, S.5    Kanki, P.J.6
  • 19
    • 77953769689 scopus 로고    scopus 로고
    • APOBEC3G contributes to HIV-1 variation through sublethal mutagenesis
    • Sadler HA, Stenglein MD, Harris RS, Mansky LM. APOBEC3G contributes to HIV-1 variation through sublethal mutagenesis. J Virol 2010, 84:7396-7404.
    • (2010) J Virol , vol.84 , pp. 7396-7404
    • Sadler, H.A.1    Stenglein, M.D.2    Harris, R.S.3    Mansky, L.M.4
  • 20
    • 80052297057 scopus 로고    scopus 로고
    • APOBEC3 Has Not Left an Evolutionary Footprint on the HIV-1 Genome
    • Ebrahimi D, Anwar F, Davenport MP. APOBEC3 Has Not Left an Evolutionary Footprint on the HIV-1 Genome. J Virol 2011, 85:9139-9146.
    • (2011) J Virol , vol.85 , pp. 9139-9146
    • Ebrahimi, D.1    Anwar, F.2    Davenport, M.P.3
  • 21
    • 80055105950 scopus 로고    scopus 로고
    • Human and Rhesus APOBEC3D, APOBEC3F, APOBEC3G, and APOBEC3H Demonstrate a Conserved Capacity To Restrict Vif-Deficient HIV-1
    • Hultquist JF, Lengyel JA, Refsland EW, LaRue RS, Lackey L, Brown WL, Harris RS. Human and Rhesus APOBEC3D, APOBEC3F, APOBEC3G, and APOBEC3H Demonstrate a Conserved Capacity To Restrict Vif-Deficient HIV-1. J Virol 2011, 85:11220-11234.
    • (2011) J Virol , vol.85 , pp. 11220-11234
    • Hultquist, J.F.1    Lengyel, J.A.2    Refsland, E.W.3    LaRue, R.S.4    Lackey, L.5    Brown, W.L.6    Harris, R.S.7
  • 22
    • 66349132212 scopus 로고    scopus 로고
    • Likely Role of APOBEC3G-Mediated G-to-A Mutations in HIV-1 Evolution and Drug Resistance
    • Jern P, Russell RA, Pathak VK, Coffin JM. Likely Role of APOBEC3G-Mediated G-to-A Mutations in HIV-1 Evolution and Drug Resistance. PLoS Pathog 2009, 5:e1000367.
    • (2009) PLoS Pathog , vol.5
    • Jern, P.1    Russell, R.A.2    Pathak, V.K.3    Coffin, J.M.4
  • 23
    • 0034878971 scopus 로고    scopus 로고
    • Human immunodeficiency virus type 1 DNA sequences genetically damaged by hypermutation are often abundant in patient peripheral blood mononuclear cells and may be generated during near-simultaneous infection and activation of CD4(+) T cells
    • Janini M, Rogers M, Birx DR, McCutchan FE. Human immunodeficiency virus type 1 DNA sequences genetically damaged by hypermutation are often abundant in patient peripheral blood mononuclear cells and may be generated during near-simultaneous infection and activation of CD4(+) T cells. J Virol 2001, 75:7973-7986.
    • (2001) J Virol , vol.75 , pp. 7973-7986
    • Janini, M.1    Rogers, M.2    Birx, D.R.3    McCutchan, F.E.4
  • 25
    • 79956325552 scopus 로고    scopus 로고
    • One-class classifiers
    • Brereton RG. One-class classifiers. J Chemometrics 2011, 25:225-246.
    • (2011) J Chemometrics , vol.25 , pp. 225-246
    • Brereton, R.G.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.