-
1
-
-
73349121270
-
An introduction to liquid chromatography-mass spectrometry instrumentation applied in plant metabolomic analyses
-
Allwood JW, Goodacre R (2010) An introduction to liquid chromatography-mass spectrometry instrumentation applied in plant metabolomic analyses. Phytochem Anal 21: 33-47
-
(2010)
Phytochem Anal
, vol.21
, pp. 33-47
-
-
Allwood, J.W.1
Goodacre, R.2
-
2
-
-
64749098176
-
Search extension transforms Wiki into a relational system: A case for flavonoid metabolite database
-
Arita M, Suwa K (2008) Search extension transforms Wiki into a relational system: A case for flavonoid metabolite database. Biodata Min 1: 7-15
-
(2008)
Biodata Min
, vol.1
, pp. 7-15
-
-
Arita, M.1
Suwa, K.2
-
3
-
-
0344942508
-
Reduction of cholesterol and glycoalkaloid levels in transgenic potato plants by overexpression of a type 1 sterol methyltransferase cDNA
-
Arnqvist L, Dutta PC, Jonsson L, Sitbon F (2003) Reduction of cholesterol and glycoalkaloid levels in transgenic potato plants by overexpression of a type 1 sterol methyltransferase cDNA. Plant Physiol 131: 1792-1799
-
(2003)
Plant Physiol
, vol.131
, pp. 1792-1799
-
-
Arnqvist, L.1
Dutta, P.C.2
Jonsson, L.3
Sitbon, F.4
-
4
-
-
69249103778
-
Use of reverse-phase liquid chromatography, linked to tandem mass spectrometry, to profile the Calvin cycle and other metabolic intermediates in Arabidopsis rosettes at different carbon dioxide concentrations
-
Arrivault S, Guenther M, Ivakov A, Feil R, Vosloh D, van Dongen JT, Sulpice R, Stitt M (2009) Use of reverse-phase liquid chromatography, linked to tandem mass spectrometry, to profile the Calvin cycle and other metabolic intermediates in Arabidopsis rosettes at different carbon dioxide concentrations. Plant J 59: 824-839
-
(2009)
Plant J
, vol.59
, pp. 824-839
-
-
Arrivault, S.1
Guenther, M.2
Ivakov, A.3
Feil, R.4
Vosloh, D.5
van Dongen, J.T.6
Sulpice, R.7
Stitt, M.8
-
5
-
-
50149099316
-
Chemistry and biology of steroidal alkaloids
-
Atta-Ur-Rahman MIC (1998) Chemistry and biology of steroidal alkaloids. Alkaloids. pp. 61-108
-
(1998)
Alkaloids.
, pp. 61-108
-
-
Atta-Ur-Rahman, M.I.C.1
-
6
-
-
0036545474
-
A multigene family of glycosyltransferases in a model plant, Arabidopsis thaliana
-
Bowles D (2002) A multigene family of glycosyltransferases in a model plant, Arabidopsis thaliana. Biochem Soc Trans 30: 301-306
-
(2002)
Biochem Soc Trans
, vol.30
, pp. 301-306
-
-
Bowles, D.1
-
8
-
-
79955855553
-
Analysis of short-term changes in the Arabidopsis thaliana glycerolipidome in response to temperature and light
-
Burgos A, Szymanski J, Seiwert B, Degenkolbe T, Hannah MA, Giavalisco P, Willmitzer L (2011) Analysis of short-term changes in the Arabidopsis thaliana glycerolipidome in response to temperature and light. Plant J 66: 656-668
-
(2011)
Plant J
, vol.66
, pp. 656-668
-
-
Burgos, A.1
Szymanski, J.2
Seiwert, B.3
Degenkolbe, T.4
Hannah, M.A.5
Giavalisco, P.6
Willmitzer, L.7
-
9
-
-
27544455984
-
Analysis of tomato glycoalkaloids by liquid chromatography coupled with electrospray ionization tandem mass spectrometry
-
Cataldi TRI, Lelario F, Bufo SA (2005) Analysis of tomato glycoalkaloids by liquid chromatography coupled with electrospray ionization tandem mass spectrometry. Rapid Commun Mass Sp 19: 3103-3110
-
(2005)
Rapid Commun Mass Sp
, vol.19
, pp. 3103-3110
-
-
Cataldi, T.R.I.1
Lelario, F.2
Bufo, S.A.3
-
10
-
-
0002317514
-
Natural products (secondary metabolites)
-
In: Buchanan B, Gruissem W, Jones R, eds. American Society of Plant Physiologists, Rockville.
-
Croteau R, Kutchan T, Lewis N (2000) Natural products (secondary metabolites). In: Buchanan B, Gruissem W, Jones R, eds. Biochemistry and Molecular Biology of Plants. American Society of Plant Physiologists, Rockville. pp. 1250-1318
-
(2000)
Biochemistry and Molecular Biology of Plants
, pp. 1250-1318
-
-
Croteau, R.1
Kutchan, T.2
Lewis, N.3
-
11
-
-
51249115603
-
Metabolite profiling of Calvin cycle intermediates by HPLC-MS using mixed-mode stationary phases
-
Cruz JA, Emery C, Wuest M, Kramer DM, Lange BM (2008) Metabolite profiling of Calvin cycle intermediates by HPLC-MS using mixed-mode stationary phases. Plant J 55: 1047-1060
-
(2008)
Plant J
, vol.55
, pp. 1047-1060
-
-
Cruz, J.A.1
Emery, C.2
Wuest, M.3
Kramer, D.M.4
Lange, B.M.5
-
12
-
-
42449122308
-
Current trends and future requirements for the mass spectrometric investigation of microbial, mammalian and plant metabolomes
-
Dunn WB (2008) Current trends and future requirements for the mass spectrometric investigation of microbial, mammalian and plant metabolomes. Phys Biol 5: 1-24
-
(2008)
Phys Biol
, vol.5
, pp. 1-24
-
-
Dunn, W.B.1
-
15
-
-
0037048751
-
Tomato glycoalkaloids: Role in the plant and in the diet
-
Friedman M (2002) Tomato glycoalkaloids: Role in the plant and in the diet. J Agric Food Chem 50: 5751-5780
-
(2002)
J Agric Food Chem
, vol.50
, pp. 5751-5780
-
-
Friedman, M.1
-
16
-
-
0033867736
-
Lowering of plasma LDL cholesterol in hamsters by the tomato glycoalkaloid tomatine
-
Friedman M, Fitch TE, Yokoyama WE (2000) Lowering of plasma LDL cholesterol in hamsters by the tomato glycoalkaloid tomatine. Food Chem Toxicol 38: 549-553
-
(2000)
Food Chem Toxicol
, vol.38
, pp. 549-553
-
-
Friedman, M.1
Fitch, T.E.2
Yokoyama, W.E.3
-
17
-
-
84994588710
-
Dehydrotomatine content in tomatoes
-
Friedman M, Levin CE (1998) Dehydrotomatine content in tomatoes. J Agric Food Chem 46: 4571-4576
-
(1998)
J Agric Food Chem
, vol.46
, pp. 4571-4576
-
-
Friedman, M.1
Levin, C.E.2
-
18
-
-
2342564917
-
Tomato steroidal alkaloid glycosides, esculeosides A and B, from ripe fruits
-
Fujiwara Y, Takaki A, Uehara Y, Ikeda T, Okawa M, Yamauchi K, Ono M, Yoshimitsu H, Nohara T (2004) Tomato steroidal alkaloid glycosides, esculeosides A and B, from ripe fruits. Tetrahedron 60: 4915-4920
-
(2004)
Tetrahedron
, vol.60
, pp. 4915-4920
-
-
Fujiwara, Y.1
Takaki, A.2
Uehara, Y.3
Ikeda, T.4
Okawa, M.5
Yamauchi, K.6
Ono, M.7
Yoshimitsu, H.8
Nohara, T.9
-
19
-
-
19644365078
-
A new tomato pregnane glycoside from the overripe fruits
-
Fujiwara Y, Yoshizaki M, Matsushita S, Yahara S, Yae E, Ikeda T, Ono M, Nohara T (2005) A new tomato pregnane glycoside from the overripe fruits. Chem Pharm Bull 53: 584-585
-
(2005)
Chem Pharm Bull
, vol.53
, pp. 584-585
-
-
Fujiwara, Y.1
Yoshizaki, M.2
Matsushita, S.3
Yahara, S.4
Yae, E.5
Ikeda, T.6
Ono, M.7
Nohara, T.8
-
20
-
-
68049083650
-
C-13 isotope-labeled metabolomes allowing for improved compound annotation and relative quantification in liquid chromatography-mass spectrometry-based metabolomic research
-
Giavalisco P, Kohl K, Hummel J, Seiwert B, Willmitzer L (2009) C-13 isotope-labeled metabolomes allowing for improved compound annotation and relative quantification in liquid chromatography-mass spectrometry-based metabolomic research. Anal Chem 81: 6546-6551
-
(2009)
Anal Chem
, vol.81
, pp. 6546-6551
-
-
Giavalisco, P.1
Kohl, K.2
Hummel, J.3
Seiwert, B.4
Willmitzer, L.5
-
22
-
-
53649087094
-
Non-targeted analysis of spatial metabolite composition in strawberry (Fragaria x ananassa) flowers
-
Hanhineva K, Rogachev I, Kokko H, Mintz-Oron S, Venger I, Karenlampi S, Aharoni A (2008) Non-targeted analysis of spatial metabolite composition in strawberry (Fragaria x ananassa) flowers. Phytochemistry 69: 2463-2481
-
(2008)
Phytochemistry
, vol.69
, pp. 2463-2481
-
-
Hanhineva, K.1
Rogachev, I.2
Kokko, H.3
Mintz-Oron, S.4
Venger, I.5
Karenlampi, S.6
Aharoni, A.7
-
23
-
-
77954439868
-
MassBank: A public repository for sharing mass spectral data for life sciences
-
Horai H, Arita M, Kanaya S, Nihei Y, Ikeda T, Suwa K, Ojima Y, Tanaka K, Tanaka S, Aoshima K, Oda Y, Kakazu Y, Kusano M, Tohge T, Matsuda F, Sawada Y, Hirai MY, Nakanishi H, Ikeda K, Akimoto N, Maoka T, Takahashi H, Ara T, Sakurai N, Suzuki H, Shibata D, Neumann S, Iida T, Tanaka K, Funatsu K, Matsuura F, Soga T, Taguchi R, Saito K, Nishioka T (2010) MassBank: A public repository for sharing mass spectral data for life sciences. J Mass Spectrom 45: 703-714
-
(2010)
J Mass Spectrom
, vol.45
, pp. 703-714
-
-
Horai, H.1
Arita, M.2
Kanaya, S.3
Nihei, Y.4
Ikeda, T.5
Suwa, K.6
Ojima, Y.7
Tanaka, K.8
Tanaka, S.9
Aoshima, K.10
Oda, Y.11
Kakazu, Y.12
Kusano, M.13
Tohge, T.14
Matsuda, F.15
Sawada, Y.16
Hirai, M.Y.17
Nakanishi, H.18
Ikeda, K.19
Akimoto, N.20
Maoka, T.21
Takahashi, H.22
Ara, T.23
Sakurai, N.24
Suzuki, H.25
Shibata, D.26
Neumann, S.27
Iida, T.28
Tanaka, K.29
Funatsu, K.30
Matsuura, F.31
Soga, T.32
Taguchi, R.33
Saito, K.34
Nishioka, T.35
more..
-
24
-
-
65349181863
-
Involvement of ethylene in the accumulation of esculeoside a during fruit ripening of tomato (Solanum lycopersicum)
-
Iijima Y, Fujiwara Y, Tokita T, Ikeda T, Nohara T, Aoki K, Shibata D (2009) Involvement of ethylene in the accumulation of esculeoside a during fruit ripening of tomato (Solanum lycopersicum). J Agric Food Chem 57: 3247-3252
-
(2009)
J Agric Food Chem
, vol.57
, pp. 3247-3252
-
-
Iijima, Y.1
Fujiwara, Y.2
Tokita, T.3
Ikeda, T.4
Nohara, T.5
Aoki, K.6
Shibata, D.7
-
25
-
-
44349092469
-
Metabolite annotations based on the integration of mass spectral information
-
Iijima Y, Nakamura Y, Ogata Y, Tanaka K, Sakurai N, Suda K, Suzuki T, Suzuki H, Okazaki K, Kitayama M, Kanaya S, Aoki K, Shibata D (2008) Metabolite annotations based on the integration of mass spectral information. Plant J 54: 949-962
-
(2008)
Plant J
, vol.54
, pp. 949-962
-
-
Iijima, Y.1
Nakamura, Y.2
Ogata, Y.3
Tanaka, K.4
Sakurai, N.5
Suda, K.6
Suzuki, T.7
Suzuki, H.8
Okazaki, K.9
Kitayama, M.10
Kanaya, S.11
Aoki, K.12
Shibata, D.13
-
26
-
-
84893770596
-
Steroidal glycoalkaloid profiling and structures of glycoalkaloids in wild tomato fruit
-
Iijima Y, Watanabe B, Sasaki R, Takenaka M, Ono H, Sakurai N, Umemoto N, Suzuki H, Shibata D, Aoki K (2013) Steroidal glycoalkaloid profiling and structures of glycoalkaloids in wild tomato fruit. Phytochemistry 95: 145-157
-
(2013)
Phytochemistry
, vol.95
, pp. 145-157
-
-
Iijima, Y.1
Watanabe, B.2
Sasaki, R.3
Takenaka, M.4
Ono, H.5
Sakurai, N.6
Umemoto, N.7
Suzuki, H.8
Shibata, D.9
Aoki, K.10
-
27
-
-
84880273715
-
Biosynthesis of antinutritional alkaloids in solanaceous crops is mediated by clustered genes
-
Itkin M, Heinig U, Tzfadia O, Bhide AJ, Shinde B, Cardenas PD, Bocobza SE, Unger T, Malitsky S, Finkers R, Tikunov Y, Bovy A, Chikate Y, Singh P, Rogachev I, Beekwilder J, Giri AP, Aharoni A (2013) Biosynthesis of antinutritional alkaloids in solanaceous crops is mediated by clustered genes. Science 341: 175-179
-
(2013)
Science
, vol.341
, pp. 175-179
-
-
Itkin, M.1
Heinig, U.2
Tzfadia, O.3
Bhide, A.J.4
Shinde, B.5
Cardenas, P.D.6
Bocobza, S.E.7
Unger, T.8
Malitsky, S.9
Finkers, R.10
Tikunov, Y.11
Bovy, A.12
Chikate, Y.13
Singh, P.14
Rogachev, I.15
Beekwilder, J.16
Giri, A.P.17
Aharoni, A.18
-
28
-
-
84856455729
-
GLYCOALKALOID METABOLISM1 is required for steroidal alkaloid glycosylation and prevention of phytotoxicity in tomato
-
Itkin M, Rogachev I, Alkan N, Rosenberg T, Malitsky S, Masini L, Meir S, Iijima Y, Aoki K, de Vos R, Prusky D, Burdman S, Beekwilder J, Aharoni A (2011) GLYCOALKALOID METABOLISM1 is required for steroidal alkaloid glycosylation and prevention of phytotoxicity in tomato. Plant Cell 23: 4507-4525
-
(2011)
Plant Cell
, vol.23
, pp. 4507-4525
-
-
Itkin, M.1
Rogachev, I.2
Alkan, N.3
Rosenberg, T.4
Malitsky, S.5
Masini, L.6
Meir, S.7
Iijima, Y.8
Aoki, K.9
de Vos, R.10
Prusky, D.11
Burdman, S.12
Beekwilder, J.13
Aharoni, A.14
-
30
-
-
79955001112
-
Changes in esculeoside a content in different regions of the tomato fruit during maturation and heat processing
-
Katsumata A, Kimura M, Saigo H, Aburaya K, Nakano M, Ikeda T, Fujiwara Y, Nagai R (2011) Changes in esculeoside a content in different regions of the tomato fruit during maturation and heat processing. J Agric Food Chem 59: 4104-4110
-
(2011)
J Agric Food Chem
, vol.59
, pp. 4104-4110
-
-
Katsumata, A.1
Kimura, M.2
Saigo, H.3
Aburaya, K.4
Nakano, M.5
Ikeda, T.6
Fujiwara, Y.7
Nagai, R.8
-
31
-
-
84881476562
-
LipidBlast in silico tandem mass spectrometry database for lipid identification
-
Kind T, Liu KH, Lee DY, DeFelice B, Meissen JK, Fiehn O (2013) LipidBlast in silico tandem mass spectrometry database for lipid identification. Nat Methods 10: 755-758
-
(2013)
Nat Methods
, vol.10
, pp. 755-758
-
-
Kind, T.1
Liu, K.H.2
Lee, D.Y.3
DeFelice, B.4
Meissen, J.K.5
Fiehn, O.6
-
32
-
-
67651085448
-
Highly sensitive and high-throughput analysis of plant hormones using ms-probe modification and liquid chromatographytandem mass spectrometry: An application for hormone profiling in Oryza sativa
-
Kojima M, Kamada-Nobusada T, Komatsu H, Takei K, Kuroha T, Mizutani M, Ashikari M, Ueguchi-Tanaka M, Matsuoka M, Suzuki K, Sakakibara H (2009) Highly sensitive and high-throughput analysis of plant hormones using ms-probe modification and liquid chromatographytandem mass spectrometry: An application for hormone profiling in Oryza sativa. Plant Cell Physiol 50: 1201-1214
-
(2009)
Plant Cell Physiol
, vol.50
, pp. 1201-1214
-
-
Kojima, M.1
Kamada-Nobusada, T.2
Komatsu, H.3
Takei, K.4
Kuroha, T.5
Mizutani, M.6
Ashikari, M.7
Ueguchi-Tanaka, M.8
Matsuoka, M.9
Suzuki, K.10
Sakakibara, H.11
-
33
-
-
1842535103
-
Dehydrotomatine and alpha-tomatine content in tomato fruits and vegetative plant tissues
-
Kozukue N, Han JS, Lee KR, Friedman M (2004) Dehydrotomatine and alpha-tomatine content in tomato fruits and vegetative plant tissues. J Agric Food Chem 52: 2079-2083
-
(2004)
J Agric Food Chem
, vol.52
, pp. 2079-2083
-
-
Kozukue, N.1
Han, J.S.2
Lee, K.R.3
Friedman, M.4
-
34
-
-
84890985872
-
Quantitative profiling and pattern analysis of triacylglycerol species in Arabidopsis seeds by electrospray ionization mass spectrometry
-
Li M, Baughman E, Roth M, Han X, Welti R, Wang X (2014) Quantitative profiling and pattern analysis of triacylglycerol species in Arabidopsis seeds by electrospray ionization mass spectrometry. Plant J 77: 160-172
-
(2014)
Plant J
, vol.77
, pp. 160-172
-
-
Li, M.1
Baughman, E.2
Roth, M.3
Han, X.4
Welti, R.5
Wang, X.6
-
35
-
-
79955018190
-
Bioactivities of glycoalkaloids and their aglycones from Solanum species
-
Milner SE, Brunton NP, Jones PW, O'Brien NM, Collins SG, Maguire AR (2011) Bioactivities of glycoalkaloids and their aglycones from Solanum species. J Agric Food Chem 59: 3454-3484
-
(2011)
J Agric Food Chem
, vol.59
, pp. 3454-3484
-
-
Milner, S.E.1
Brunton, N.P.2
Jones, P.W.3
O'Brien, N.M.4
Collins, S.G.5
Maguire, A.R.6
-
36
-
-
48549105883
-
Gene expression and metabolism in tomato fruit surface tissues
-
Mintz-Oron S, Mandel T, Rogachev I, Feldberg L, Lotan O, Yativ M, Wang Z, Jetter R, Venger I, Adato A, Aharoni A (2008) Gene expression and metabolism in tomato fruit surface tissues. Plant Physiol 147: 823-851
-
(2008)
Plant Physiol
, vol.147
, pp. 823-851
-
-
Mintz-Oron, S.1
Mandel, T.2
Rogachev, I.3
Feldberg, L.4
Lotan, O.5
Yativ, M.6
Wang, Z.7
Jetter, R.8
Venger, I.9
Adato, A.10
Aharoni, A.11
-
37
-
-
33747137944
-
A liquid chromatography-mass spectrometry-based metabolome database for tomato
-
Moco S, Bino RJ, Vorst O, Verhoeven HA, de Groot J, van Beek TA, Vervoort J, de Vos CHR (2006) A liquid chromatography-mass spectrometry-based metabolome database for tomato. Plant Physiol 141: 1205-1218
-
(2006)
Plant Physiol
, vol.141
, pp. 1205-1218
-
-
Moco, S.1
Bino, R.J.2
Vorst, O.3
Verhoeven, H.A.4
de Groot, J.5
van Beek, T.A.6
Vervoort, J.7
de Vos, C.H.R.8
-
38
-
-
77954266539
-
Mass spectrometry-based sequencing of lignin oligomers
-
Morreel K, Dima O, Kim H, Lu F, Niculaes C, Vanholme R, Dauwe R, Goeminne G, Inze D, Messens E, Ralph J, Boerjan W (2010) Mass spectrometry-based sequencing of lignin oligomers. Plant Physiol 153: 1464-1478
-
(2010)
Plant Physiol
, vol.153
, pp. 1464-1478
-
-
Morreel, K.1
Dima, O.2
Kim, H.3
Lu, F.4
Niculaes, C.5
Vanholme, R.6
Dauwe, R.7
Goeminne, G.8
Inze, D.9
Messens, E.10
Ralph, J.11
Boerjan, W.12
-
39
-
-
84899135483
-
Systematic structural characterization of metabolites in Arabidopsis via candidate substrate-product pair networks
-
Morreel K, Saeys Y, Dima O, Lu F, Van de Peer Y, Vanholme R, Ralph J, Vanholme B, Boerjan W (2014) Systematic structural characterization of metabolites in Arabidopsis via candidate substrate-product pair networks. Plant Cell 26: 929-945
-
(2014)
Plant Cell
, vol.26
, pp. 929-945
-
-
Morreel, K.1
Saeys, Y.2
Dima, O.3
Lu, F.4
Van de Peer, Y.5
Vanholme, R.6
Ralph, J.7
Vanholme, B.8
Boerjan, W.9
-
40
-
-
84873359659
-
Combination of liquid chromatography fourier transform ion cyclotron resonance-mass spectrometry with c-13-labeling for chemical assignment of sulfur-containing metabolites in onion bulbs
-
Nakabayashi R, Sawada Y, Yamada Y, Suzuki M, Hirai MY, Sakurai T, Saito K (2013) Combination of liquid chromatography fourier transform ion cyclotron resonance-mass spectrometry with c-13-labeling for chemical assignment of sulfur-containing metabolites in onion bulbs. Anal Chem 85: 1310-1315
-
(2013)
Anal Chem
, vol.85
, pp. 1310-1315
-
-
Nakabayashi, R.1
Sawada, Y.2
Yamada, Y.3
Suzuki, M.4
Hirai, M.Y.5
Sakurai, T.6
Saito, K.7
-
41
-
-
77958601930
-
The tomato saponin, esculeoside A
-
Nohara T, Ono M, Ikeda T, Fujiwara Y, El-Aasr M (2010) The tomato saponin, esculeoside A. J Nat Prod 73: 1734-1741
-
(2010)
J Nat Prod
, vol.73
, pp. 1734-1741
-
-
Nohara, T.1
Ono, M.2
Ikeda, T.3
Fujiwara, Y.4
El-Aasr, M.5
-
42
-
-
66449114329
-
A Chloroplastic udp-glucose pyrophosphorylase from Arabidopsis is the committed enzyme for the first step of sulfolipid biosynthesis
-
Okazaki Y, Shimojima M, Sawada Y, Toyooka K, Narisawa T, Mochida K, Tanaka H, Matsuda F, Hirai A, Hirai MY, Ohta H, Saito K (2009) A Chloroplastic udp-glucose pyrophosphorylase from Arabidopsis is the committed enzyme for the first step of sulfolipid biosynthesis. Plant Cell 21: 892-909
-
(2009)
Plant Cell
, vol.21
, pp. 892-909
-
-
Okazaki, Y.1
Shimojima, M.2
Sawada, Y.3
Toyooka, K.4
Narisawa, T.5
Mochida, K.6
Tanaka, H.7
Matsuda, F.8
Hirai, A.9
Hirai, M.Y.10
Ohta, H.11
Saito, K.12
-
43
-
-
0010770289
-
Structure and cytotoxicity of dehydrotomatine, a minor component of tomato glycoalkaloids
-
Ono H, Kozuka D, Chiba Y, Horigane A, Isshiki K (1997) Structure and cytotoxicity of dehydrotomatine, a minor component of tomato glycoalkaloids. J Agric Food Chem 45: 3743-3746
-
(1997)
J Agric Food Chem
, vol.45
, pp. 3743-3746
-
-
Ono, H.1
Kozuka, D.2
Chiba, Y.3
Horigane, A.4
Isshiki, K.5
-
44
-
-
32044435181
-
Steroidal alkaloid glycosides, esculeosides C and D, from the ripe fruit of cherry tomato
-
Ono M, Takara Y, Egami M, Uranaka K, Yoshimitsu H, Matsushita S, Fujiwara Y, Ikeda T, Nohara T (2006) Steroidal alkaloid glycosides, esculeosides C and D, from the ripe fruit of cherry tomato. Chem Pharm Bull 54: 237-239
-
(2006)
Chem Pharm Bull
, vol.54
, pp. 237-239
-
-
Ono, M.1
Takara, Y.2
Egami, M.3
Uranaka, K.4
Yoshimitsu, H.5
Matsushita, S.6
Fujiwara, Y.7
Ikeda, T.8
Nohara, T.9
-
45
-
-
36549034360
-
Current status of metabolic phytochemistry
-
Petersen M (2007) Current status of metabolic phytochemistry. Phytochemistry 68: 2847-2860
-
(2007)
Phytochemistry
, vol.68
, pp. 2847-2860
-
-
Petersen, M.1
-
46
-
-
83555173359
-
Combined transcription factor profiling, microarray analysis and metabolite profiling reveals the transcriptional control of metabolic shifts occurring during tomato fruit development
-
Rohrmann J, Tohge T, Alba R, Osorio S, Caldana C, McQuinn R, Arvidsson S, van der Merwe MJ, Riaño-Pachón DM, Mueller-Roeber B, Fei Z, Nesi A, Giovannoni J, Fernie A (2011) Combined transcription factor profiling, microarray analysis and metabolite profiling reveals the transcriptional control of metabolic shifts occurring during tomato fruit development. Plant J 68: 999-1013
-
(2011)
Plant J
, vol.68
, pp. 999-1013
-
-
Rohrmann, J.1
Tohge, T.2
Alba, R.3
Osorio, S.4
Caldana, C.5
McQuinn, R.6
Arvidsson, S.7
van der Merwe, M.J.8
Riaño-Pachón, D.M.9
Mueller-Roeber, B.10
Fei, Z.11
Nesi, A.12
Giovannoni, J.13
Fernie, A.14
-
47
-
-
33744491283
-
Flavonoid diversity and biosynthesis in seed of Arabidopsis thaliana
-
Routaboul JM, Kerhoas L, Debeaujon I, Pourcel L, Caboche M, Einhorn J, Lepiniec L (2006) Flavonoid diversity and biosynthesis in seed of Arabidopsis thaliana. Planta 224: 96-107
-
(2006)
Planta
, vol.224
, pp. 96-107
-
-
Routaboul, J.M.1
Kerhoas, L.2
Debeaujon, I.3
Pourcel, L.4
Caboche, M.5
Einhorn, J.6
Lepiniec, L.7
-
48
-
-
13244297050
-
Metabolic profiling of leaves and fruit of wild species tomato: A survey of the Solanum lycopersicum complex
-
Schauer N, Zamir D, Fernie AR (2005) Metabolic profiling of leaves and fruit of wild species tomato: A survey of the Solanum lycopersicum complex. J Exp Bot 56: 297-307
-
(2005)
J Exp Bot
, vol.56
, pp. 297-307
-
-
Schauer, N.1
Zamir, D.2
Fernie, A.R.3
-
49
-
-
79955726394
-
Fast-forward genetics enabled by new sequencing technologies
-
Schneeberger K, Weigel D (2011) Fast-forward genetics enabled by new sequencing technologies. Trends Plant Sci 16: 282-288
-
(2011)
Trends Plant Sci
, vol.16
, pp. 282-288
-
-
Schneeberger, K.1
Weigel, D.2
-
50
-
-
77950928397
-
Mass spectrometry screening reveals widespread diversity in trichome specialized metabolites of tomato chromosomal substitution lines
-
Schilmiller A, Shi F, Kim J, Charbonneau AL, Holmes D, Jones AD, Last RL (2010) Mass spectrometry screening reveals widespread diversity in trichome specialized metabolites of tomato chromosomal substitution lines. Plant J 62: 391-403
-
(2010)
Plant J
, vol.62
, pp. 391-403
-
-
Schilmiller, A.1
Shi, F.2
Kim, J.3
Charbonneau, A.L.4
Holmes, D.5
Jones, A.D.6
Last, R.L.7
-
51
-
-
84983633298
-
KNApSAcK: A comprehensive species-metabolite relationship database
-
Shinbo Y, Nakamura Y, Altaf-Ul-Amin M, Asahi H, Kurokawa K, Arita M, Saito K, Ohta D, Shibata D, Kanaya S (2006) KNApSAcK: A comprehensive species-metabolite relationship database. Plant Metabolomics 57: 165-181
-
(2006)
Plant Metabolomics
, vol.57
, pp. 165-181
-
-
Shinbo, Y.1
Nakamura, Y.2
Altaf-Ul-Amin, M.3
Asahi, H.4
Kurokawa, K.5
Arita, M.6
Saito, K.7
Ohta, D.8
Shibata, D.9
Kanaya, S.10
-
53
-
-
77957043732
-
Evolution of acyltransferase genes: Origin and diversification of the BAHD superfamily of acyltransferases involved in secondary metabolism
-
St-Pierre B, De Luca V (2000) Evolution of acyltransferase genes: Origin and diversification of the BAHD superfamily of acyltransferases involved in secondary metabolism. Evol Metabol Pathways 34: 285-315
-
(2000)
Evol Metabol Pathways
, vol.34
, pp. 285-315
-
-
St-Pierre, B.1
De Luca, V.2
-
54
-
-
84905454468
-
On the regulation and function of secondary metabolism during fruit development and ripening
-
Tohge T, Alseekh S, Fernie A (2014a) On the regulation and function of secondary metabolism during fruit development and ripening. J Exp Bot 65: 4599-4611
-
(2014)
J Exp Bot
, vol.65
, pp. 4599-4611
-
-
Tohge, T.1
Alseekh, S.2
Fernie, A.3
-
56
-
-
62549159971
-
Web-based resources for mass-spectrometry-based metabolomics: A user's guide
-
Tohge T, Fernie AR (2009) Web-based resources for mass-spectrometry-based metabolomics: A user's guide. Phytochemistry 70: 450-456
-
(2009)
Phytochemistry
, vol.70
, pp. 450-456
-
-
Tohge, T.1
Fernie, A.R.2
-
57
-
-
77954396635
-
Combining genetic diversity, informatics and metabolomics to facilitate annotation of plant gene function
-
Tohge T, Fernie AR (2010) Combining genetic diversity, informatics and metabolomics to facilitate annotation of plant gene function. Nat Prot 5: 1210-1227
-
(2010)
Nat Prot
, vol.5
, pp. 1210-1227
-
-
Tohge, T.1
Fernie, A.R.2
-
58
-
-
84863768165
-
Annotation of plant gene function via combined genomics, metabolomics and informatics
-
Tohge T, Fernie AR (2012) Annotation of plant gene function via combined genomics, metabolomics and informatics. J Vis Exp 64: e3487
-
(2012)
J Vis Exp
, vol.64
, pp. e3487
-
-
Tohge, T.1
Fernie, A.R.2
-
59
-
-
82755168200
-
From models to crop species: Caveats and solutions for translational metabolomics
-
Tohge T, Mettler T, Arrivault S, Carroll AJ, Stitt M, Fernie AR (2011a) From models to crop species: Caveats and solutions for translational metabolomics. Front Plant Sci 2: 61
-
(2011)
Front Plant Sci
, vol.2
, pp. 61
-
-
Tohge, T.1
Mettler, T.2
Arrivault, S.3
Carroll, A.J.4
Stitt, M.5
Fernie, A.R.6
-
60
-
-
17044369876
-
Functional genomics by integrated analysis of metabolome and transcriptome of Arabidopsis plants over-expressing an MYB transcription factor
-
Tohge T, Nishiyama Y, Hirai MY, Yano M, Nakajima J, Awazuhara M, Inoue E, Takahashi H, Goodenowe DB, Kitayama M, Noji M, Yamazaki M, Saito K (2005) Functional genomics by integrated analysis of metabolome and transcriptome of Arabidopsis plants over-expressing an MYB transcription factor. Plant J 42: 218-235
-
(2005)
Plant J
, vol.42
, pp. 218-235
-
-
Tohge, T.1
Nishiyama, Y.2
Hirai, M.Y.3
Yano, M.4
Nakajima, J.5
Awazuhara, M.6
Inoue, E.7
Takahashi, H.8
Goodenowe, D.B.9
Kitayama, M.10
Noji, M.11
Yamazaki, M.12
Saito, K.13
-
61
-
-
80455173508
-
Toward the Storage Metabolome: Profiling the Barley Vacuole
-
Tohge T, Ramos MS, Nunes-Nesi A, Mutwil M, Giavalisco P, Steinhauser D, Schellenberg M, Willmitzer L, Persson S, Martinoia E, Fernie AR (2011b) Toward the Storage Metabolome: Profiling the Barley Vacuole. Plant Physiol 157: 1469-1482
-
(2011)
Plant Physiol
, vol.157
, pp. 1469-1482
-
-
Tohge, T.1
Ramos, M.S.2
Nunes-Nesi, A.3
Mutwil, M.4
Giavalisco, P.5
Steinhauser, D.6
Schellenberg, M.7
Willmitzer, L.8
Persson, S.9
Martinoia, E.10
Fernie, A.R.11
-
63
-
-
34247598751
-
Phytochemical genomics in Arabidopsis thaliana: A case study for functional identification of flavonoid biosynthesis genes
-
Tohge T, Yonekura-Sakakibara K, Niida R, Watanabe-Takahashi A, Saito K (2007) Phytochemical genomics in Arabidopsis thaliana: A case study for functional identification of flavonoid biosynthesis genes. Pure Appl Chem 79: 811-823
-
(2007)
Pure Appl Chem
, vol.79
, pp. 811-823
-
-
Tohge, T.1
Yonekura-Sakakibara, K.2
Niida, R.3
Watanabe-Takahashi, A.4
Saito, K.5
-
64
-
-
0030032562
-
Lycoperosides A-C, three stereoisomeric 23-acetoxyspirosolan-3 beta-ol beta-lycotetraosides from Lycopersicon esculentum
-
Yahara S, Uda N, Nohara T (1996) Lycoperosides A-C, three stereoisomeric 23-acetoxyspirosolan-3 beta-ol beta-lycotetraosides from Lycopersicon esculentum. Phytochemistry 42: 169-172
-
(1996)
Phytochemistry
, vol.42
, pp. 169-172
-
-
Yahara, S.1
Uda, N.2
Nohara, T.3
-
65
-
-
1642424212
-
Steroidal alkaloid glycosides from tomato (Lycopersicon esculentum)
-
Yahara S, Uda N, Yoshio E, Yae E (2004) Steroidal alkaloid glycosides from tomato (Lycopersicon esculentum). J Nat Prod 67: 500-502
-
(2004)
J Nat Prod
, vol.67
, pp. 500-502
-
-
Yahara, S.1
Uda, N.2
Yoshio, E.3
Yae, E.4
-
66
-
-
66149101012
-
C22 isomerization in alpha-tomatine-to-esculeoside A conversion during tomato ripening is driven by C27 hydroxylation of triterpenoidal skeleton
-
Yamanaka T, Vincken JP, Zuilhof H, Legger A, Takada N, Gruppen H (2009) C22 isomerization in alpha-tomatine-to-esculeoside A conversion during tomato ripening is driven by C27 hydroxylation of triterpenoidal skeleton. J Agric Food Chem 57: 3786-3791
-
(2009)
J Agric Food Chem
, vol.57
, pp. 3786-3791
-
-
Yamanaka, T.1
Vincken, J.P.2
Zuilhof, H.3
Legger, A.4
Takada, N.5
Gruppen, H.6
-
67
-
-
70350214653
-
Functional genomics for plant natural product biosynthesis
-
Yonekura-Sakakibara K, Saito K (2009) Functional genomics for plant natural product biosynthesis. Nat Prod Rep 26: 1466-1487
-
(2009)
Nat Prod Rep
, vol.26
, pp. 1466-1487
-
-
Yonekura-Sakakibara, K.1
Saito, K.2
|