-
1
-
-
0035160843
-
The strawberry FaMYB1 transcription factor suppresses anthocyanin and flavonol accumulation in transgenic tobacco
-
DOI 10.1046/j.1365-313X.2001.01154.x
-
Aharoni, A., De Vos, C.H.R., Wein, M., Sun, Z.K., Greco, R., Kroon, A., Mol, J.N.M., and, O'Connell, A.P., (2001) The strawberry FaMYB1 transcription factor suppresses anthocyanin and flavonol accumulation in transgenic tobacco. Plant J. 28, 319-332. (Pubitemid 33066396)
-
(2001)
Plant Journal
, vol.28
, Issue.3
, pp. 319-332
-
-
Aharoni, A.1
De Vos, C.H.R.2
Wein, M.3
Sun, Z.4
Greco, R.5
Kroon, A.6
Mol, J.N.M.7
O'Connell, A.P.8
-
2
-
-
4544258687
-
ESTs, cDNA microarrays, and gene expression profiling: Tools for dissecting plant physiology and development
-
DOI 10.1111/j.1365-313X.2004.02178.x, Techniques for Molecular Analysis
-
Alba, R., Fei, Z.J., Payton, P., et al. (2004) ESTs, cDNA microarrays, and gene expression profiling: tools for dissecting plant physiology and development. Plant J. 39, 697-714. (Pubitemid 39218779)
-
(2004)
Plant Journal
, vol.39
, Issue.5
, pp. 697-714
-
-
Alba, R.1
Fei, Z.2
Payton, P.3
Liu, Y.4
Moore, S.L.5
Debbie, P.6
Cohn, J.7
D'Ascenzo, M.8
Gordon, J.S.9
Rose, J.K.C.10
Martin, G.11
Tanksley, S.D.12
Bouzayen, M.13
Jahn, M.M.14
Giovannoni, J.15
-
3
-
-
33344476119
-
Transcriptome and selected metabolite analyses reveal multiple points of ethylene control during tomato fruit development
-
Alba, R., Payton, P., Fei, Z.J., McQuinn, R., Debbie, P., Martin, G.B., Tanksley, S.D., and, Giovannoni, J.J., (2005) Transcriptome and selected metabolite analyses reveal multiple points of ethylene control during tomato fruit development. Plant Cell, 17, 2954-2965.
-
(2005)
Plant Cell
, vol.17
, pp. 2954-2965
-
-
Alba, R.1
Payton, P.2
Fei, Z.J.3
McQuinn, R.4
Debbie, P.5
Martin, G.B.6
Tanksley, S.D.7
Giovannoni, J.J.8
-
4
-
-
33745729883
-
How foliar-applied nutrients affect stresses in perennial fruit plants
-
In (Tagliavini, M. Toselli, M. Bertschinger, L. Neilsen, D. and Thalheimer, M. eds). Leuven, Belgium: International Society of Horticultural Science
-
Andrews, P.K., (2002) How foliar-applied nutrients affect stresses in perennial fruit plants. In Proceedings of the International Symposium on Foliar Nutrition of Perennial Fruit Plants (, Tagliavini, M., Toselli, M., Bertschinger, L., Neilsen, D., and, Thalheimer, M., eds). Leuven, Belgium: International Society of Horticultural Science, pp. 49-55.
-
(2002)
Proceedings of the International Symposium on Foliar Nutrition of Perennial Fruit Plants
, pp. 49-55
-
-
Andrews, P.K.1
-
5
-
-
58149307466
-
QuantPrime - A flexible tool for reliable high-throughput primer design for quantitative PCR
-
Arvidsson, S., Kwasniewski, M., Riano-Pachon, D.M., and, Mueller-Roeber, B., (2008) QuantPrime-a flexible tool for reliable high-throughput primer design for quantitative PCR. BMC Bioinformatics, 9, 15.
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 15
-
-
Arvidsson, S.1
Kwasniewski, M.2
Riano-Pachon, D.M.3
Mueller-Roeber, B.4
-
6
-
-
64749093047
-
Regulation of de novo fatty acid synthesis in maturing oilseeds of Arabidopsis
-
Baud, S., and, Lepiniec, L., (2009) Regulation of de novo fatty acid synthesis in maturing oilseeds of Arabidopsis. Plant Physiol. Biochem. 47, 448-455.
-
(2009)
Plant Physiol. Biochem.
, vol.47
, pp. 448-455
-
-
Baud, S.1
Lepiniec, L.2
-
7
-
-
20244383169
-
dg mutation of tomato: Alterations in the fruit metabolome
-
DOI 10.1111/j.1469-8137.2005.01362.x
-
dg mutation of tomato: alterations in the fruit metabolome. New Phytol. 166, 427-438. (Pubitemid 40561037)
-
(2005)
New Phytologist
, vol.166
, Issue.2
, pp. 427-438
-
-
Bino, R.J.1
De Vos, C.H.R.2
Lieberman, M.3
Hall, R.D.4
Bovy, A.5
Jonker, H.H.6
Tikunov, Y.7
Lommen, A.8
Moco, S.9
Levin, I.10
-
8
-
-
34250651222
-
The grapevine transcription factor VvMYBPA1 regulates proanthocyanidin synthesis during fruit development
-
DOI 10.1104/pp.106.093203
-
Bogs, J., Jaffe, F.W., Takos, A.M., Walker, A.R., and, Robinson, S.P., (2007) The grapevine transcription factor VvMYBPA1 regulates proanthocyanidin synthesis during fruit development. Plant Physiol. 143, 1347-1361. (Pubitemid 46941551)
-
(2007)
Plant Physiology
, vol.143
, Issue.3
, pp. 1347-1361
-
-
Bogs, J.1
Jaffe, F.W.2
Takos, A.M.3
Walker, A.R.4
Robinson, S.P.5
-
9
-
-
0034657338
-
PAT1, a new member of the GRAS family, is involved in phytochrome A signal transduction
-
Bolle, C., Koncz, C., and, Chua, N.H., (2000) PAT1, a new member of the GRAS family, is involved in phytochrome A signal transduction. Genes Dev. 14, 1269-1278. (Pubitemid 30327507)
-
(2000)
Genes and Development
, vol.14
, Issue.10
, pp. 1269-1278
-
-
Bolle, C.1
Koncz, C.2
Chua, N.-H.3
-
10
-
-
0034489893
-
Activation tagging identifies a conserved MYB regulator of phenylpropanoid biosynthesis
-
DOI 10.1105/tpc.12.12.2383
-
Borevitz, J.O., Xia, Y.J., Blount, J., Dixon, R.A., and, Lamb, C., (2000) Activation tagging identifies a conserved MYB regulator of phenylpropanoid biosynthesis. Plant Cell, 12, 2383-2393. (Pubitemid 32106413)
-
(2000)
Plant Cell
, vol.12
, Issue.12
, pp. 2383-2393
-
-
Borevitz, J.O.1
Xia, Y.2
Blount, J.3
Dixon, R.A.4
Lamb, C.5
-
11
-
-
0036801705
-
High-flavonol tomatoes resulting from the heterologous expression of the maize transcription factor genes LC and C1
-
DOI 10.1105/tpc.004218
-
Bovy, A., de Vos, R., Kemper, M., et al. (2002) High-flavonol tomatoes resulting from the heterologous expression of the maize transcription factor genes LC and C1. Plant Cell, 14, 2509-2526. (Pubitemid 35224846)
-
(2002)
Plant Cell
, vol.14
, Issue.10
, pp. 2509-2526
-
-
Bovy, A.1
De Vos, R.2
Kemper, M.3
Schijlen, E.4
Almenar Pertejo, M.5
Muir, S.6
Collins, G.7
Robinson, S.8
Verhoeyen, M.9
Hughes, S.10
Santos-Buelga, C.11
Van Tunen, A.12
-
12
-
-
0028824322
-
RNA isolation from plant tissue recalcitrant to extraction by guanidine
-
Bugos, R.C., Chiang, V.L., Zhang, X.H., Campbell, E.R., Podila, G.K., and, Campbell, W.H., (1995) RNA isolation from plant tissue recalcitrant to extraction by guanidine. BioTechniques, 19, 734-737.
-
(1995)
BioTechniques
, vol.19
, pp. 734-737
-
-
Bugos, R.C.1
Chiang, V.L.2
Zhang, X.H.3
Campbell, E.R.4
Podila, G.K.5
Campbell, W.H.6
-
13
-
-
55749105106
-
Enrichment of tomato fruit with health-promoting anthocyanins by expression of select transcription factors
-
Butelli, E., Titta, L., Giorgio, M., et al. (2008) Enrichment of tomato fruit with health-promoting anthocyanins by expression of select transcription factors. Nat. Biotechnol. 26, 1301-1308.
-
(2008)
Nat. Biotechnol.
, vol.26
, pp. 1301-1308
-
-
Butelli, E.1
Titta, L.2
Giorgio, M.3
-
14
-
-
34547176148
-
A quantitative RT-PCR platform for high-throughput expression profiling of 2500 rice transcription factors
-
Caldana, C., Scheible, W.R., Mueller-Roeber, B., and, Ruzicic, S., (2007) A quantitative RT-PCR platform for high-throughput expression profiling of 2500 rice transcription factors. Plant Methods, 3, 9.
-
(2007)
Plant Methods
, vol.3
, pp. 9
-
-
Caldana, C.1
Scheible, W.R.2
Mueller-Roeber, B.3
Ruzicic, S.4
-
15
-
-
76049105639
-
Response of wild-type and high pigment-1 tomato fruit to UV-B depletion: Flavonoid profiling and gene expression
-
Calvenzani, V., Martinelli, M., Lazzeri, V., Giuntini, D., Dall'Asta, C., Galaverna, G., Tonelli, C., Ranieri, A., and, Petroni, K., (2010) Response of wild-type and high pigment-1 tomato fruit to UV-B depletion: flavonoid profiling and gene expression. Planta, 231, 755-765.
-
(2010)
Planta
, vol.231
, pp. 755-765
-
-
Calvenzani, V.1
Martinelli, M.2
Lazzeri, V.3
Giuntini, D.4
Dall'Asta, C.5
Galaverna, G.6
Tonelli, C.7
Ranieri, A.8
Petroni, K.9
-
16
-
-
33745614596
-
Metabolic regulation underlying tomato fruit development
-
DOI 10.1093/jxb/erj020
-
Carrari, F., and, Fernie, A.R., (2006) Metabolic regulation underlying tomato fruit development. J. Exp. Bot. 57, 1883-1897. (Pubitemid 43992239)
-
(2006)
Journal of Experimental Botany
, vol.57
, Issue.9
, pp. 1883-1897
-
-
Carrari, F.1
Fernie, A.R.2
-
17
-
-
33845665396
-
Integrated analysis of metabolite and transcript levels reveals the metabolic shifts that underlie tomato fruit development and highlight regulatory aspects of metabolic network behavior
-
DOI 10.1104/pp.106.088534
-
Carrari, F., Baxter, C., Usadel, B., et al. (2006) Integrated analysis of metabolite and transcript levels reveals the metabolic shifts that underlie tomato fruit development and highlight regulatory aspects of metabolic network behavior. Plant Physiol. 142, 1380-1396. (Pubitemid 44956921)
-
(2006)
Plant Physiology
, vol.142
, Issue.4
, pp. 1380-1396
-
-
Carrari, F.1
Baxter, C.2
Usadel, B.3
Urbanczyk-Wochniak, E.4
Zanor, M.-I.5
Nunes-Nesi, A.6
Nikiforova, V.7
Centero, D.8
Ratzka, A.9
Pauly, M.10
Sweetlove, L.J.11
Fernie, A.R.12
-
18
-
-
78650079526
-
A tomato (Solanum lycopersicum) APETALA2/ERF gene, SlAP2a, is a negative regulator of fruit ripening
-
Chung, M.Y., Vrebalov, J., Alba, R., Lee, J., McQuinn, R., Chung, J.D., Klein, P., and, Giovannoni, J., (2010) A tomato (Solanum lycopersicum) APETALA2/ERF gene, SlAP2a, is a negative regulator of fruit ripening. Plant J. 64, 936-947.
-
(2010)
Plant J.
, vol.64
, pp. 936-947
-
-
Chung, M.Y.1
Vrebalov, J.2
Alba, R.3
Lee, J.4
McQuinn, R.5
Chung, J.D.6
Klein, P.7
Giovannoni, J.8
-
19
-
-
0141995484
-
Selection of candidate housekeeping controls in tomato plants using EST data
-
Coker, J.S., and, Davies, E., (2003) Selection of candidate housekeeping controls in tomato plants using EST data. BioTechniques, 35, 740-748. (Pubitemid 37248358)
-
(2003)
BioTechniques
, vol.35
, Issue.4
, pp. 740-748
-
-
Coker, J.S.1
Davies, E.2
-
20
-
-
44349107589
-
Regulatory change in YABBY-like transcription factor led to evolution of extreme fruit size during tomato domestication
-
DOI 10.1038/ng.144, PII NG144
-
Cong, B., Barrero, L.S., and, Tanksley, S.D., (2008) Regulatory change in YABBY-like transcription factor led to evolution of extreme fruit size during tomato domestication. Nat. Genet. 40, 800-804. (Pubitemid 351748864)
-
(2008)
Nature Genetics
, vol.40
, Issue.6
, pp. 800-804
-
-
Cong, B.1
Barrero, L.S.2
Tanksley, S.D.3
-
21
-
-
0242286655
-
Increases in cell elongation, plastid compartment size and phytoene synthase activity underlie the phenotype of the high pigment-1 mutant of tomato
-
DOI 10.1007/s00425-003-1065-9
-
Cookson, P.J., Kiano, J.W., Shipton, C.A., Fraser, P.D., Romer, S., Schuch, W., Bramley, P.M., and, Pyke, K.A., (2003) Increases in cell elongation, plastid compartment size and phytoene synthase activity underlie the phenotype of the high pigment-1 mutant of tomato. Planta, 217, 896-903. (Pubitemid 37347852)
-
(2003)
Planta
, vol.217
, Issue.6
, pp. 896-903
-
-
Cookson, P.J.1
Kiano, J.W.2
Shipton, C.A.3
Fraser, P.D.4
Romer, S.5
Schuch, W.6
Bramley, P.M.7
Pyke, K.A.8
-
22
-
-
1942475192
-
Real-time RT-PCR profiling of over 1400 Arabidopsis transcription factors: Unprecedented sensitivity reveals novel root-and shoot-specific genes
-
DOI 10.1111/j.1365-313X.2004.02051.x
-
Czechowski, T., Bari, R.P., Stitt, M., Scheible, W.R., and, Udvardi, M.K., (2004) Real-time RT-PCR profiling of over 1400 Arabidopsis transcription factors: unprecedented sensitivity reveals novel root- and shoot-specific genes. Plant J. 38, 366-379. (Pubitemid 38503736)
-
(2004)
Plant Journal
, vol.38
, Issue.2
, pp. 366-379
-
-
Czechowski, T.1
Bari, R.P.2
Stitt, M.3
Scheible, W.-R.4
Udvardi, M.K.5
-
23
-
-
70350676670
-
The grapevine R2R3-MYB transcription factor VvMYBF1 regulates flavonol synthesis in developing grape berries
-
Czemmel, S., Stracke, R., Weisshaar, B., Cordon, N., Harris, N.N., Walker, A.R., Robinson, S.P., and, Bogs, J., (2009) The grapevine R2R3-MYB transcription factor VvMYBF1 regulates flavonol synthesis in developing grape berries. Plant Physiol. 151, 1513-1530.
-
(2009)
Plant Physiol.
, vol.151
, pp. 1513-1530
-
-
Czemmel, S.1
Stracke, R.2
Weisshaar, B.3
Cordon, N.4
Harris, N.N.5
Walker, A.R.6
Robinson, S.P.7
Bogs, J.8
-
24
-
-
73449141172
-
Identification of Solanum habrochaites loci that quantitatively influence tomato fruit ripening-associated ethylene emissions
-
Dal Cin, V., Kevany, B., Fei, Z., and, Klee, H.J., (2009) Identification of Solanum habrochaites loci that quantitatively influence tomato fruit ripening-associated ethylene emissions. Theor. Appl. Genet. 119, 1183-1192.
-
(2009)
Theor. Appl. Genet.
, vol.119
, pp. 1183-1192
-
-
Dal Cin, V.1
Kevany, B.2
Fei, Z.3
Klee, H.J.4
-
25
-
-
70349115711
-
Evidence for a positive regulatory role of strawberry (Fragaria × ananassa) FaWRKY1 and Arabidopsis AtWRKY75 proteins in resistance
-
Encinas-Villarejo, S., Maldonado, A.M., Amil-Ruiz, F., de los Santos, B., Romero, F., Pliego-Alfaro, F., Munoz-Blanco, J., and, Caballero, J.L., (2009) Evidence for a positive regulatory role of strawberry (Fragaria × ananassa) FaWRKY1 and Arabidopsis AtWRKY75 proteins in resistance. J. Exp. Bot. 60, 3043-3065.
-
(2009)
J. Exp. Bot.
, vol.60
, pp. 3043-3065
-
-
Encinas-Villarejo, S.1
Maldonado, A.M.2
Amil-Ruiz, F.3
De Los Santos, B.4
Romero, F.5
Pliego-Alfaro, F.6
Munoz-Blanco, J.7
Caballero, J.L.8
-
26
-
-
77953194787
-
Integrative transcript and metabolite analysis of nutritionally enhanced DE-ETIOLATED1 downregulated tomato fruit
-
Enfissi, E.M.A., Barneche, F., Ahmed, I., et al. (2010) Integrative transcript and metabolite analysis of nutritionally enhanced DE-ETIOLATED1 downregulated tomato fruit. Plant Cell, 22, 1190-1215.
-
(2010)
Plant Cell
, vol.22
, pp. 1190-1215
-
-
Enfissi, E.M.A.1
Barneche, F.2
Ahmed, I.3
-
27
-
-
33846404129
-
Red colouration in apple fruit is due to the activity of the MYB transcription factor, MdMYB10
-
DOI 10.1111/j.1365-313X.2006.02964.x
-
Espley, R.V., Hellens, R.P., Putterill, J., Stevenson, D.E., Kutty-Amma, S., and, Allan, A.C., (2007) Red colouration in apple fruit is due to the activity of the MYB transcription factor, MdMYB10. Plant J. 49, 414-427. (Pubitemid 46146623)
-
(2007)
Plant Journal
, vol.49
, Issue.3
, pp. 414-427
-
-
Espley, R.V.1
Hellens, R.P.2
Putterill, J.3
Stevenson, D.E.4
Kutty-Amma, S.5
Allan, A.C.6
-
28
-
-
58549086530
-
Selection of internal control genes for quantitative real-time RT-PCR studies during tomato development process
-
Exposito-Rodriguez, M., Borges, A.A., Borges-Perez, A., and, Perez, J.A., (2008) Selection of internal control genes for quantitative real-time RT-PCR studies during tomato development process. BMC Plant Biol. 8, 12.
-
(2008)
BMC Plant Biol.
, vol.8
, pp. 12
-
-
Exposito-Rodriguez, M.1
Borges, A.A.2
Borges-Perez, A.3
Perez, J.A.4
-
29
-
-
57749121318
-
Reconfiguration of the achene and receptacle metabolic networks during strawberry fruit development
-
DOI 10.1104/pp.108.120691
-
Fait, A., Hanhineva, K., Beleggia, R., Dai, N., Rogachev, I., Nikiforova, V.J., Fernie, A.R., and, Aharoni, A., (2008) Reconfiguration of the achene and receptacle metabolic networks during strawberry fruit development. Plant Physiol. 148, 730-750. (Pubitemid 352847532)
-
(2008)
Plant Physiology
, vol.148
, Issue.2
, pp. 730-750
-
-
Fait, A.1
Hanhineva, K.2
Beleggia, R.3
Dai, N.4
Rogachev, I.5
Nikiforova, V.J.6
Fernie, A.R.7
Aharoni, A.8
-
30
-
-
80051933578
-
Recommendations for reporting metabolite data
-
Fernie, A.R., Aharoni, A., Willmitzer, L., Stitt, M., Tohge, T., Kopka, J., Carroll, A.J., Saito, K., Fraser, P.D., and, Deluca, V., (2011) Recommendations for reporting metabolite data. Plant Cell, 23, 2477-2482.
-
(2011)
Plant Cell
, vol.23
, pp. 2477-2482
-
-
Fernie, A.R.1
Aharoni, A.2
Willmitzer, L.3
Stitt, M.4
Tohge, T.5
Kopka, J.6
Carroll, A.J.7
Saito, K.8
Fraser, P.D.9
Deluca, V.10
-
31
-
-
0034647914
-
ORCA3, a jasmonate-responsive transcriptional regulator of plant primary and secondary metabolism
-
DOI 10.1126/science.289.5477.295
-
van der Fits, L., and, Memelink, J., (2000) ORCA3, a jasmonate-responsive transcriptional regulator of plant primary and secondary metabolism. Science, 289, 295-297. (Pubitemid 30469906)
-
(2000)
Science
, vol.289
, Issue.5477
, pp. 295-297
-
-
Van Der Fits, L.1
Memelink, J.2
-
32
-
-
0032159998
-
Wrinkled 1: A novel, low-seed-oil mutant of arabidopsis with a deficiency in the seed-specific regulation of carbohydrate metabolism
-
Focks, N., and, Benning, C., (1998) wrinkled1: a novel, low-seed-oil mutant of Arabidopsis with a deficiency in the seed-specific regulation of carbohydrate metabolism. Plant Physiol. 118, 91-101. (Pubitemid 128652972)
-
(1998)
Plant Physiology
, vol.118
, Issue.1
, pp. 91-101
-
-
Focks, N.1
Benning, C.2
-
33
-
-
79251559717
-
Identification of potential target genes for the tomato fruit-ripening regulator RIN by chromatin immunoprecipitation
-
Fujisawa, M., Nakano, T., and, Ito, Y., (2011) Identification of potential target genes for the tomato fruit-ripening regulator RIN by chromatin immunoprecipitation. BMC Plant Biol. 11, 26.
-
(2011)
BMC Plant Biol.
, vol.11
, pp. 26
-
-
Fujisawa, M.1
Nakano, T.2
Ito, Y.3
-
34
-
-
39249083203
-
Abscisic acid deficiency in the tomato mutant high-pigment 3 leading to increased plastid number and higher fruit lycopene content
-
DOI 10.1111/j.1365-313X.2007.03362.x
-
Galpaz, N., Wang, Q., Menda, N., Zamir, D., and, Hirschberg, J., (2008) Abscisic acid deficiency in the tomato mutant high-pigment 3 leading to increased plastid number and higher fruit lycopene content. Plant J. 53, 717-730. (Pubitemid 351495861)
-
(2008)
Plant Journal
, vol.53
, Issue.5
, pp. 717-730
-
-
Galpaz, N.1
Wang, Q.2
Menda, N.3
Zamir, D.4
Hirschberg, J.5
-
35
-
-
2942690153
-
Genetic regulation of fruit development and ripening
-
DOI 10.1105/tpc.019158
-
Giovannoni, J.J., (2004) Genetic regulation of fruit development and ripening. Plant Cell, 16, S170-S180. (Pubitemid 38774226)
-
(2004)
Plant Cell
, vol.16
, Issue.SUPPL.
-
-
Giovannoni, J.J.1
-
36
-
-
34248213602
-
Fruit ripening mutants yield insights into ripening control
-
DOI 10.1016/j.pbi.2007.04.008, PII S136952660700043X, Physiology and Metabolism Edited by Clint Chapple and Malcolm M Campbell
-
Giovannoni, J.J., (2007) Fruit ripening mutants yield insights into ripening control. Curr. Opin. Plant Biol. 10, 283-289. (Pubitemid 46710481)
-
(2007)
Current Opinion in Plant Biology
, vol.10
, Issue.3
, pp. 283-289
-
-
Giovannoni, J.J.1
-
37
-
-
79957497988
-
Recent advances in the transcriptional regulation of the flavonoid biosynthetic pathway
-
Hichri, I., Barrieu, F., Bogs, J., Kappel, C., Delrot, S., and, Lauvergeat, V., (2011) Recent advances in the transcriptional regulation of the flavonoid biosynthetic pathway. J. Exp. Bot. 62, 2465-2483.
-
(2011)
J. Exp. Bot.
, vol.62
, pp. 2465-2483
-
-
Hichri, I.1
Barrieu, F.2
Bogs, J.3
Kappel, C.4
Delrot, S.5
Lauvergeat, V.6
-
38
-
-
38649092410
-
Dendroscope: An interactive viewer for large phylogenetic trees
-
Huson, D.H., Richter, D.C., Rausch, C., Dezulian, T., Franz, M., and, Rupp, R., (2007) Dendroscope: an interactive viewer for large phylogenetic trees. BMC Bioinformatics, 8, 6.
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 6
-
-
Huson, D.H.1
Richter, D.C.2
Rausch, C.3
Dezulian, T.4
Franz, M.5
Rupp, R.6
-
39
-
-
44349092469
-
Metabolite annotations based on the integration of mass spectral information
-
DOI 10.1111/j.1365-313X.2008.03434.x
-
Iijima, Y., Nakamura, Y., Ogata, Y., et al. (2008) Metabolite annotations based on the integration of mass spectral information. Plant J. 54, 949-962. (Pubitemid 351744774)
-
(2008)
Plant Journal
, vol.54
, Issue.5
, pp. 949-962
-
-
Iijima, Y.1
Nakamura, Y.2
Ogata, Y.3
Tanaka, K.4
Sakurai, N.5
Suda, K.6
Suzuki, T.7
Suzuki, H.8
Okazaki, K.9
Kitayama, M.10
Kanaya, S.11
Aoki, K.12
Shibata, D.13
-
40
-
-
0000236799
-
Pleiotropic effects associated with the chlorophyll intensifier mutations high pigment and dark green in tomato
-
Jarret, R.L., Sayama, H., and, Tigchelaar, E.C., (1984) Pleiotropic effects associated with the chlorophyll intensifier mutations high pigment and dark green in tomato. J. Am. Soc. Hort. Sci. 109, 873-878.
-
(1984)
J. Am. Soc. Hort. Sci.
, vol.109
, pp. 873-878
-
-
Jarret, R.L.1
Sayama, H.2
Tigchelaar, E.C.3
-
41
-
-
0035983845
-
Transparent Testa Glabra2, a trichome and seed coat development gene of arabidopsis, encodes a WRKY transcription factor
-
DOI 10.1105/tpc.001404
-
Johnson, C.S., Kolevski, B., and, Smyth, D.R., (2002) TRANSPARENT TESTA GLABRA2, a trichome and seed coat development gene of Arabidopsis, encodes a WRKY transcription factor. Plant Cell, 14, 1359-1375. (Pubitemid 34780437)
-
(2002)
Plant Cell
, vol.14
, Issue.6
, pp. 1359-1375
-
-
Johnson, C.S.1
Kolevski, B.2
Smyth, D.R.3
-
42
-
-
79551472035
-
Proteomics insights into plant signaling and development
-
Kaufmann, K., Smaczniak, C., de Vries, S., Angenent, G.C., and, Karlova, R., (2011) Proteomics insights into plant signaling and development. Proteomics, 11, 744-755.
-
(2011)
Proteomics
, vol.11
, pp. 744-755
-
-
Kaufmann, K.1
Smaczniak, C.2
De Vries, S.3
Angenent, G.C.4
Karlova, R.5
-
43
-
-
77954587801
-
Improving the flavor of fresh fruits: Genomics, biochemistry, and biotechnology
-
Klee, H.J., (2010) Improving the flavor of fresh fruits: genomics, biochemistry, and biotechnology. New Phytol. 187, 44-56.
-
(2010)
New Phytol.
, vol.187
, pp. 44-56
-
-
Klee, H.J.1
-
44
-
-
0036795679
-
Tobacco to tomatoes: A phylogenetic perspective on fruit diversity in the Solanaceae
-
Knapp, S., (2002) Tobacco to tomatoes: a phylogenetic perspective on fruit diversity in the Solanaceae. J. Exp. Bot. 53, 2001-2022. (Pubitemid 35181192)
-
(2002)
Journal of Experimental Botany
, vol.53
, Issue.377
, pp. 2001-2022
-
-
Knapp, S.1
-
45
-
-
0033165677
-
ANTHOCYANINLESS2, a homeobox gene affecting anthocyanin distribution and root development in Arabidopsis
-
Kubo, H., Peeters, A.J.M., Aarts, M.G.M., Pereira, A., and, Koornneef, M., (1999) ANTHOCYANINLESS2, a homeobox gene affecting anthocyanin distribution and root development in Arabidopsis. Plant Cell, 11, 1217-1226.
-
(1999)
Plant Cell
, vol.11
, pp. 1217-1226
-
-
Kubo, H.1
Peeters, A.J.M.2
Aarts, M.G.M.3
Pereira, A.4
Koornneef, M.5
-
46
-
-
57749121934
-
NAC family proteins NARS1/NAC2 and NARS2/NAM in the outer integument regulate embryogenesis in arabidopsis
-
DOI 10.1105/tpc.108.060160
-
Kunieda, T., Mitsuda, N., Ohme-Takagi, M., Takeda, S., Aida, M., Tasaka, M., Kondo, M., Nishimura, M., and, Hara-Nishimura, I., (2008) NAC family proteins NARS1/NAC2 and NARS2/NAM in the outer integument regulate embryogenesis in Arabidopsis. Plant Cell, 20, 2631-2642. (Pubitemid 352844581)
-
(2008)
Plant Cell
, vol.20
, Issue.10
, pp. 2631-2642
-
-
Kunieda, T.1
Mitsuda, N.2
Ohme-Takagi, M.3
Takeda, S.4
Aida, M.5
Tasaka, M.6
Kondo, M.7
Nishimura, M.8
Hara-Nishimura, I.9
-
47
-
-
36448991500
-
Clustal W and Clustal × version 2.0
-
Larkin, M.A., Blackshields, G., Brown, N.P., et al. (2007) Clustal W and Clustal × version 2.0. Bioinformatics, 23, 2947-2948.
-
(2007)
Bioinformatics
, vol.23
, pp. 2947-2948
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
-
48
-
-
0038530961
-
The tomato dark green mutation is a novel allele of the tomato homolog of the DEETIOLATED1 gene
-
Levin, I., Frankel, P., Gilboa, N., Tanny, S., and, Lalazar, A., (2003) The tomato dark green mutation is a novel allele of the tomato homolog of the DEETIOLATED1 gene. Theor. Appl. Genet. 106, 454-460. (Pubitemid 36599858)
-
(2003)
Theoretical and Applied Genetics
, vol.106
, Issue.3
, pp. 454-460
-
-
Levin, I.1
Frankel, P.2
Gilboa, N.3
Tanny, S.4
Lalazar, A.5
-
49
-
-
2942752231
-
The tomato homolog of the gene encoding UV-damaged DNA binding protein 1 (DDB1) underlined as the gene that causes the high pigment-1 mutant phenotype
-
DOI 10.1007/s00122-004-1584-1
-
Lieberman, M., Segev, O., Gilboa, N., Lalazar, A., and, Levin, I., (2004) The tomato homolog of the gene encoding UV-damaged DNA binding protein 1 (DDB1) underlined as the gene that causes the high pigment-1 mutant phenotype. Theor. Appl. Genet. 108, 1574-1581. (Pubitemid 38791265)
-
(2004)
Theoretical and Applied Genetics
, vol.108
, Issue.8
, pp. 1574-1581
-
-
Lieberman, M.1
Segev, O.2
Gilboa, N.3
Lalazar, A.4
Levin, I.5
-
50
-
-
55249116565
-
A tomato HD-Zip homeobox protein, LeHB-1, plays an important role in floral organogenesis and ripening
-
Lin, Z.F., Hong, Y.G., Yin, M.G., Li, C.Y., Zhang, K., and, Grierson, D., (2008) A tomato HD-Zip homeobox protein, LeHB-1, plays an important role in floral organogenesis and ripening. Plant J. 55, 301-310.
-
(2008)
Plant J.
, vol.55
, pp. 301-310
-
-
Lin, Z.F.1
Hong, Y.G.2
Yin, M.G.3
Li, C.Y.4
Zhang, K.5
Grierson, D.6
-
51
-
-
77954576097
-
An R2R3 MYB transcription factor associated with regulation of the anthocyanin biosynthetic pathway in Rosaceae
-
Lin-Wang, K., Bolitho, K., Grafton, K., Kortstee, A., Karunairetnam, S., McGhie, T., Espley, R., Hellens, R., and, Allan, A., (2010) An R2R3 MYB transcription factor associated with regulation of the anthocyanin biosynthetic pathway in Rosaceae. BMC Plant Biol. 10, 50.
-
(2010)
BMC Plant Biol.
, vol.10
, pp. 50
-
-
Lin-Wang, K.1
Bolitho, K.2
Grafton, K.3
Kortstee, A.4
Karunairetnam, S.5
McGhie, T.6
Espley, R.7
Hellens, R.8
Allan, A.9
-
52
-
-
34248580879
-
Gas chromatography mass spectrometry-based metabolite profiling in plants
-
Lisec, J., Schauer, N., Kopka, J., Willmitzer, L., and, Fernie, A.R., (2006) Gas chromatography mass spectrometry-based metabolite profiling in plants. Nat. Protoc. 1, 387-396.
-
(2006)
Nat. Protoc.
, vol.1
, pp. 387-396
-
-
Lisec, J.1
Schauer, N.2
Kopka, J.3
Willmitzer, L.4
Fernie, A.R.5
-
53
-
-
3042798253
-
Manipulation of light signal transduction as a means of modifying fruit nutritional quality in tomato
-
DOI 10.1073/pnas.0400935101
-
Liu, Y.S., Roof, S., Ye, Z.B., Barry, C., van Tuinen, A., Vrebalov, J., Bowler, C., and, Giovannoni, J., (2004) Manipulation of light signal transduction as a means of modifying fruit nutritional quality in tomato. Proc. Natl Acad. Sci. USA, 101, 9897-9902. (Pubitemid 38869333)
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, Issue.26
, pp. 9897-9902
-
-
Liu, Y.1
Roof, S.2
Ye, Z.3
Barry, C.4
Van Tuinent, A.5
Vrebalov, J.6
Bowler, C.7
Giovannoni, J.8
-
54
-
-
79951526486
-
Transcription factor AtMYB44 regulates induced expression of the ETHYLENE INSENSITIVE2 gene in Arabidopsis responding to a harpin protein
-
Liu, R.X., Chen, L., Jia, Z.H., Lu, B.B., Shi, H.J., Shao, W.L., and, Dong, H.S., (2011) Transcription factor AtMYB44 regulates induced expression of the ETHYLENE INSENSITIVE2 gene in Arabidopsis responding to a harpin protein. Mol. Plant-Microbe Interact. 24, 377-389.
-
(2011)
Mol. Plant-Microbe Interact.
, vol.24
, pp. 377-389
-
-
Liu, R.X.1
Chen, L.2
Jia, Z.H.3
Lu, B.B.4
Shi, H.J.5
Shao, W.L.6
Dong, H.S.7
-
55
-
-
40049092920
-
TagFinder for the quantitative analysis of gas chromatography - Mass spectrometry (GC-MS)-based metabolite profiling experiments
-
DOI 10.1093/bioinformatics/btn023
-
Luedemann, A., Strassburg, K., Erban, A., and, Kopka, J., (2008) TagFinder for the quantitative analysis of gas chromatography-mass spectrometry (GC-MS)-based metabolite profiling experiments. Bioinformatics, 24, 732-737. (Pubitemid 351321224)
-
(2008)
Bioinformatics
, vol.24
, Issue.5
, pp. 732-737
-
-
Luedemann, A.1
Strassburg, K.2
Erban, A.3
Kopka, J.4
-
56
-
-
33746513103
-
A naturally occurring epigenetic mutation in a gene encoding an SBP-box transcription factor inhibits tomato fruit ripening
-
DOI 10.1038/ng1841, PII NG1841
-
Manning, K., Tor, M., Poole, M., Hong, Y., Thompson, A.J., King, G.J., Giovannoni, J.J., and, Seymour, G.B., (2006) A naturally occurring epigenetic mutation in a gene encoding an SBP-box transcription factor inhibits tomato fruit ripening. Nat. Genet. 38, 948-952. (Pubitemid 44141665)
-
(2006)
Nature Genetics
, vol.38
, Issue.8
, pp. 948-952
-
-
Manning, K.1
Tor, M.2
Poole, M.3
Hong, Y.4
Thompson, A.J.5
King, G.J.6
Giovannoni, J.J.7
Seymour, G.B.8
-
57
-
-
77953220026
-
The Arabidopsis floral homeotic proteins APETALA3 and PISTILLATA negatively regulate the BANQUO genes implicated in light signaling
-
Mara, C.D., Huang, T.B., and, Irish, V.F., (2010) The Arabidopsis floral homeotic proteins APETALA3 and PISTILLATA negatively regulate the BANQUO genes implicated in light signaling. Plant Cell, 22, 690-702.
-
(2010)
Plant Cell
, vol.22
, pp. 690-702
-
-
Mara, C.D.1
Huang, T.B.2
Irish, V.F.3
-
58
-
-
0003607151
-
-
London: Academic Press
-
Mardia, K.V., Kent, J.T., and, Bibby, J.M., (1979) Multivariate Analysis. London: Academic Press.
-
(1979)
Multivariate Analysis
-
-
Mardia, K.V.1
Kent, J.T.2
Bibby, J.M.3
-
59
-
-
66049131151
-
Biology and genetic engineering of fruit maturation for enhanced quality and shelf-life
-
Matas, A.J., Gapper, N.E., Chung, M.Y., Giovannoni, J.J., and, Rose, J.K.C., (2009) Biology and genetic engineering of fruit maturation for enhanced quality and shelf-life. Curr. Opin. Biotechnol. 20, 197-203.
-
(2009)
Curr. Opin. Biotechnol.
, vol.20
, pp. 197-203
-
-
Matas, A.J.1
Gapper, N.E.2
Chung, M.Y.3
Giovannoni, J.J.4
Rose, J.K.C.5
-
60
-
-
77954500670
-
Isolation of WDR and bHLH genes related to flavonoid synthesis in grapevine (Vitis vinifera L.)
-
Matus, J.T., Poupin, M.J., Canon, P., Bordeu, E., Alcalde, J.A., and, Arce-Johnson, P., (2010) Isolation of WDR and bHLH genes related to flavonoid synthesis in grapevine (Vitis vinifera L.). Plant Mol. Biol. 72, 607-620.
-
(2010)
Plant Mol. Biol.
, vol.72
, pp. 607-620
-
-
Matus, J.T.1
Poupin, M.J.2
Canon, P.3
Bordeu, E.4
Alcalde, J.A.5
Arce-Johnson, P.6
-
61
-
-
33747137944
-
A liquid chromatography-mass spectrometry-based metabolome database for tomato
-
DOI 10.1104/pp.106.078428
-
Moco, S., Bino, R.J., Vorst, O., Verhoeven, H.A., de Groot, J., van Beek, T.A., Vervoort, J., and, de Vos, C.H.R., (2006) A liquid chromatography-mass spectrometry-based metabolome database for tomato. Plant Physiol. 141, 1205-1218. (Pubitemid 44223273)
-
(2006)
Plant Physiology
, vol.141
, Issue.4
, pp. 1205-1218
-
-
Moco, S.1
Bino, R.J.2
Vorst, O.3
Verhoeven, H.A.4
De Groot, J.5
Van Beek, T.A.6
Vervoort, J.7
Ric De Vos, C.H.8
-
62
-
-
63549110574
-
Gene and metabolite regulatory network analysis of early developing fruit tissues highlights new candidate genes for the control of tomato fruit composition and development
-
Mounet, F., Moing, A., Garcia, V., et al. (2009) Gene and metabolite regulatory network analysis of early developing fruit tissues highlights new candidate genes for the control of tomato fruit composition and development. Plant Physiol. 149, 1505-1528.
-
(2009)
Plant Physiol.
, vol.149
, pp. 1505-1528
-
-
Mounet, F.1
Moing, A.2
Garcia, V.3
-
63
-
-
0033079225
-
Phenotype of the tomato high pigment-2 mutant is caused by a mutation in the tomato homolog of DEETIOLATED1
-
Mustilli, A.C., Fenzi, F., Ciliento, R., Alfano, F., and, Bowler, C., (1999) Phenotype of the tomato high pigment-2 mutant is caused by a mutation in the tomato homolog of DEETIOLATED1. Plant Cell, 11, 145-157.
-
(1999)
Plant Cell
, vol.11
, pp. 145-157
-
-
Mustilli, A.C.1
Fenzi, F.2
Ciliento, R.3
Alfano, F.4
Bowler, C.5
-
64
-
-
0033768615
-
The TT8 gene encodes a basic helix-loop-helix domain protein required for expression of DFR and BAN genes in Arabidopsis siliques
-
Nesi, N., Debeaujon, I., Jond, C., Pelletier, G., Caboche, M., and, Lepiniec, L., (2000) The TT8 gene encodes a basic helix-loop-helix domain protein required for expression of DFR and BAN genes in Arabidopsis siliques. Plant Cell, 12, 1863-1878.
-
(2000)
Plant Cell
, vol.12
, pp. 1863-1878
-
-
Nesi, N.1
Debeaujon, I.2
Jond, C.3
Pelletier, G.4
Caboche, M.5
Lepiniec, L.6
-
65
-
-
80052398971
-
Systems biology of tomato fruit development: Combined transcript, protein and metabolite analysis of tomato transcription factor (nor, rin) and ethylene receptor (Nr) mutants reveals novel regulatory interactions
-
Osorio, S., Alba, R., Damasceno, C.M., et al. (2011) Systems biology of tomato fruit development: combined transcript, protein and metabolite analysis of tomato transcription factor (nor, rin) and ethylene receptor (Nr) mutants reveals novel regulatory interactions. Plant Physiol. 157, 405-425.
-
(2011)
Plant Physiol.
, vol.157
, pp. 405-425
-
-
Osorio, S.1
Alba, R.2
Damasceno, C.M.3
-
66
-
-
0031416778
-
QTL analysis of morphological traits in a tomato recombinant inbred line population
-
Paran, I., Goldman, I., and, Zamir, D., (1997) QTL analysis of morphological traits in a tomato recombinant inbred line population. Genome, 40, 242-248. (Pubitemid 28132023)
-
(1997)
Genome
, vol.40
, Issue.2
, pp. 242-248
-
-
Paran, I.1
Goldman, I.2
Zamir, D.3
-
67
-
-
75549087883
-
PInTFDB: Updated content and new features of the plant transcription factor database
-
Perez-Rodriguez, P., Riano-Pachon, D.M., Correa, L.G.G., Rensing, S.A., Kersten, B., and, Mueller-Roeber, B., (2010) PInTFDB: updated content and new features of the plant transcription factor database. Nucleic Acids Res. 38, D822-D827.
-
(2010)
Nucleic Acids Res.
, vol.38
-
-
Perez-Rodriguez, P.1
Riano-Pachon, D.M.2
Correa, L.G.G.3
Rensing, S.A.4
Kersten, B.5
Mueller-Roeber, B.6
-
68
-
-
35248870127
-
Isolation of the three grape sub-lineages of B-class MADS-box TM6, PISTILLATA and APETALA3 genes which are differentially expressed during flower and fruit development
-
DOI 10.1016/j.gene.2007.08.005, PII S0378111907004313
-
Poupin, M.J., Federici, F., Medina, C., Matus, J.T., Timmermann, T., and, Arce-Johnson, P., (2007) Isolation of the three grape sub-lineages of B-class MADS-box TM6, PISTILLATA and APETALA3 genes which are differentially expressed during flower and fruit development. Gene, 404, 10-24. (Pubitemid 47562639)
-
(2007)
Gene
, vol.404
, Issue.1-2
, pp. 10-24
-
-
Poupin, M.J.1
Federici, F.2
Medina, C.3
Matus, J.T.4
Timmermann, T.5
Arce-Johnson, P.6
-
69
-
-
0037435395
-
Assumption-free analysis of quantitative real-time polymerase chain reaction (PCR) data
-
DOI 10.1016/S0304-3940(02)01423-4
-
Ramakers, C., Ruijter, J.M., Deprez, R.H.L., and, Moorman, A.F.M., (2003) Assumption-free analysis of quantitative real-time polymerase chain reaction (PCR) data. Neurosci. Lett. 339, 62-66. (Pubitemid 36263221)
-
(2003)
Neuroscience Letters
, vol.339
, Issue.1
, pp. 62-66
-
-
Ramakers, C.1
Ruijter, J.M.2
Lekanne Deprez, R.H.3
Moorman, A.F.M.4
-
70
-
-
6544223092
-
Origin of the Webb Special (Black Queen) tomato
-
Reynard, G.B., (1956) Origin of the Webb Special (Black Queen) tomato. Rep. Tomato Genet. Coop. 6, 22.
-
(1956)
Rep. Tomato Genet. Coop.
, vol.6
, pp. 22
-
-
Reynard, G.B.1
-
71
-
-
0033367101
-
The tomato I-box binding factor LeMYBI is a member of a novel class of Myb-like proteins
-
Rose, A., Meier, I., and, Wienand, U., (1999) The tomato I-box binding factor LeMYBI is a member of a novel class of Myb-like proteins. Plant J. 20, 641-652.
-
(1999)
Plant J.
, vol.20
, pp. 641-652
-
-
Rose, A.1
Meier, I.2
Wienand, U.3
-
72
-
-
2442451528
-
The plot thickens: New perspectives of primary cell wall modification
-
DOI 10.1016/j.pbi.2004.03.013, PII S1369526604000457
-
Rose, J.K.C., Saladie, M., and, Catala, C., (2004) The plot thickens: new perspectives of primary cell wall modification. Curr. Opin. Plant Biol. 7, 296-301. (Pubitemid 38611050)
-
(2004)
Current Opinion in Plant Biology
, vol.7
, Issue.3
, pp. 296-301
-
-
Rose, J.K.C.1
Saladie, M.2
Catala, C.3
-
73
-
-
43549111135
-
Molecular aspects of Anthocyanin fruit tomato in relation to high pigment-1
-
Sapir, M., Oren-Shamir, M., Ovadia, R., et al. (2008) Molecular aspects of Anthocyanin fruit tomato in relation to high pigment-1. J. Hered. 99, 292-303.
-
(2008)
J. Hered.
, vol.99
, pp. 292-303
-
-
Sapir, M.1
Oren-Shamir, M.2
Ovadia, R.3
-
74
-
-
33845651807
-
Arbuscular mycorrhiza induces gene expression of the apoplastic invertase LIN6 in tomato (Lycopersicon esculentum) roots
-
DOI 10.1093/jxb/erl172
-
Schaarschmidt, S., Roitsch, T., and, Hause, B., (2006) Arbuscular mycorrhiza induces gene expression of the apoplastic invertase LIN6 in tomato (Lycopersicon esculentum) roots. J. Exp. Bot. 57, 4015-4023. (Pubitemid 44950401)
-
(2006)
Journal of Experimental Botany
, vol.57
, Issue.15
, pp. 4015-4023
-
-
Schaarschmidt, S.1
Roitsch, T.2
Hause, B.3
-
75
-
-
0031415779
-
Inhibition of fructokinase and sucrose synthase by cytosolic levels of fructose in young tomato fruit undergoing transient starch synthesis
-
DOI 10.1034/j.1399-3054.1997.1010417.x
-
Schaffer, A.A., and, Petreikov, M., (1997) Inhibition of fructokinase and sucrose synthase by cytosolic levels of fructose in young tomato fruit undergoing transient starch synthesis. Physiol. Plant. 101, 800-806. (Pubitemid 28065362)
-
(1997)
Physiologia Plantarum
, vol.101
, Issue.4
, pp. 800-806
-
-
Schaffer, A.A.1
Petreikov, M.2
-
76
-
-
33645746673
-
Comprehensive metabolic profiling and phenotyping of interspecific introgression lines for tomato improvement
-
Schauer, N., Semel, Y., Roessner, U., et al. (2006) Comprehensive metabolic profiling and phenotyping of interspecific introgression lines for tomato improvement. Nat. Biotechnol. 24, 447-454.
-
(2006)
Nat. Biotechnol.
, vol.24
, pp. 447-454
-
-
Schauer, N.1
Semel, Y.2
Roessner, U.3
-
77
-
-
0037015275
-
De-etiolated 1 and damaged DNA binding protein 1 interact to regulate Arabidopsis photomorphogenesis
-
DOI 10.1016/S0960-9822(02)01106-5, PII S0960982202011065
-
Schroeder, D.F., Gahrtz, M., Maxwell, B.B., Cook, R.K., Kan, J.M., Alonso, J.M., Ecker, J.R., and, Chory, J., (2002) De-etiolated 1 and damaged DNA binding protein 1 interact to regulate Arabidopsis photomorphogenesis. Curr. Biol. 12, 1462-1472. (Pubitemid 35036644)
-
(2002)
Current Biology
, vol.12
, Issue.17
, pp. 1462-1472
-
-
Schroeder, D.F.1
Gahrtz, M.2
Maxwell, B.B.3
Cook R.Kimberley4
Kan, J.M.5
Alonso, J.M.6
Ecker, J.R.7
Chory, J.8
-
78
-
-
38649140176
-
Genetics and epigenetics of fruit development and ripening
-
DOI 10.1016/j.pbi.2007.09.003, PII S1369526607001380
-
Seymour, G., Poole, M., Manning, K., and, King, G.J., (2008) Genetics and epigenetics of fruit development and ripening. Curr. Opin. Plant Biol. 11, 58-63. (Pubitemid 351172871)
-
(2008)
Current Opinion in Plant Biology
, vol.11
, Issue.1
, pp. 58-63
-
-
Seymour, G.1
Poole, M.2
Manning, K.3
King, G.J.4
-
79
-
-
79251518043
-
A SEPALLATA gene is involved in the development and ripening of strawberry (Fragaria × ananassa Duch.) fruit, a non-climacteric tissue
-
Seymour, G.B., Ryder, C.D., Cevik, V., Hammond, J.P., Popovich, A., King, G.J., Vrebalov, J., Giovannoni, J.J., and, Manning, K., (2011) A SEPALLATA gene is involved in the development and ripening of strawberry (Fragaria × ananassa Duch.) fruit, a non-climacteric tissue. J. Exp. Bot. 62, 1179-1188.
-
(2011)
J. Exp. Bot.
, vol.62
, pp. 1179-1188
-
-
Seymour, G.B.1
Ryder, C.D.2
Cevik, V.3
Hammond, J.P.4
Popovich, A.5
King, G.J.6
Vrebalov, J.7
Giovannoni, J.J.8
Manning, K.9
-
80
-
-
77951986187
-
A complex interplay of three R2R3 MYB transcription factors determines the profile of aliphatic glucosinolates in Arabidopsis
-
Sonderby, I.E., Burow, M., Rowe, H.C., Kliebenstein, D.J., and, Halkier, B.A., (2010) A complex interplay of three R2R3 MYB transcription factors determines the profile of aliphatic glucosinolates in Arabidopsis. Plant Physiol. 153, 348-363.
-
(2010)
Plant Physiol.
, vol.153
, pp. 348-363
-
-
Sonderby, I.E.1
Burow, M.2
Rowe, H.C.3
Kliebenstein, D.J.4
Halkier, B.A.5
-
81
-
-
77952002600
-
Enzyme activity profiles during fruit development in tomato cultivars and Solanum pennellii
-
Steinhauser, M.C., Steinhauser, D., Koehl, K., Carrari, F., Gibon, Y., Fernie, A.R., and, Stitt, M., (2010) Enzyme activity profiles during fruit development in tomato cultivars and Solanum pennellii. Plant Physiol. 153, 80-98.
-
(2010)
Plant Physiol.
, vol.153
, pp. 80-98
-
-
Steinhauser, M.C.1
Steinhauser, D.2
Koehl, K.3
Carrari, F.4
Gibon, Y.5
Fernie, A.R.6
Stitt, M.7
-
82
-
-
34248365134
-
Differential regulation of closely related R2R3-MYB transcription factors controls flavonol accumulation in different parts of the Arabidopsis thaliana seedling
-
DOI 10.1111/j.1365-313X.2007.03078.x
-
Stracke, R., Ishihara, H., Barsch, G.H.A., Mehrtens, F., Niehaus, K., and, Weisshaar, B., (2007) Differential regulation of closely related R2R3-MYB transcription factors controls flavonol accumulation in different parts of the Arabidopsis thaliana seedling. Plant J. 50, 660-677. (Pubitemid 46733755)
-
(2007)
Plant Journal
, vol.50
, Issue.4
, pp. 660-677
-
-
Stracke, R.1
Ishihara, H.2
Huep, G.3
Barsch, A.4
Mehrtens, F.5
Niehaus, K.6
Weisshaar, B.7
-
83
-
-
78149380797
-
Analysis of PRODUCTION of FLAVONOL GLYCOSIDES-dependent flavonol glycoside accumulation in Arabidopsis thaliana plants reveals MYB11-, MYB12-and MYB111-independent flavonol glycoside accumulation
-
Stracke, R., Jahns, O., Keck, M., Tohge, T., Niehaus, K., Fernie, A.R., and, Weisshaar, B., (2010) Analysis of PRODUCTION OF FLAVONOL GLYCOSIDES-dependent flavonol glycoside accumulation in Arabidopsis thaliana plants reveals MYB11-, MYB12-and MYB111-independent flavonol glycoside accumulation. New Phytol. 188, 985-1000.
-
(2010)
New Phytol.
, vol.188
, pp. 985-1000
-
-
Stracke, R.1
Jahns, O.2
Keck, M.3
Tohge, T.4
Niehaus, K.5
Fernie, A.R.6
Weisshaar, B.7
-
84
-
-
38149142837
-
Getting to grips with the plant metabolic network
-
Sweetlove, L.J., Fell, D., and, Fernie, A.R., (2008) Getting to grips with the plant metabolic network. Biochem. J. 409, 27-41.
-
(2008)
Biochem. J.
, vol.409
, pp. 27-41
-
-
Sweetlove, L.J.1
Fell, D.2
Fernie, A.R.3
-
85
-
-
34547686313
-
On the processing of metabolic information through metabolite-gene communication networks: An approach for modelling causality
-
DOI 10.1016/j.phytochem.2007.04.017, PII S0031942207002762
-
Szymanski, J., Bielecka, M., Carrari, F., Fernie, A.R., Hoefgen, R., and, Nikiforova, V.J., (2007) On the processing of metabolic information through metabolite-gene communication networks: an approach for modelling causality. Phytochemistry, 68, 2163-2175. (Pubitemid 47211191)
-
(2007)
Phytochemistry
, vol.68
, Issue.16-18
, pp. 2163-2175
-
-
Szymanski, J.1
Bielecka, M.2
Carrari, F.3
Fernie, A.R.4
Hoefgen, R.5
Nikiforova, V.J.6
-
86
-
-
77951985425
-
The role of ethylene and cold temperature in the regulation of the apple POLYGALACTURONASE1 gene and fruit softening
-
Tacken, E., Ireland, H., Gunaseelan, K., et al. (2010) the role of ethylene and cold temperature in the regulation of the apple POLYGALACTURONASE1 gene and fruit softening. Plant Physiol. 153, 294-305.
-
(2010)
Plant Physiol.
, vol.153
, pp. 294-305
-
-
Tacken, E.1
Ireland, H.2
Gunaseelan, K.3
-
87
-
-
33344469496
-
A novel approach for nontargeted data analysis for metabolomics. Large-scale profiling of tomato fruit volatiles
-
DOI 10.1104/pp.105.068130
-
Tikunov, Y., Lommen, A., de Vos, C.H.R., Verhoeven, H.A., Bino, R.J., Hall, R.D., and, Bovy, A.G., (2005) A novel approach for nontargeted data analysis for metabolomics. Large-scale profiling of tomato fruit volatiles. Plant Physiol. 139, 1125-1137. (Pubitemid 43790853)
-
(2005)
Plant Physiology
, vol.139
, Issue.3
, pp. 1125-1137
-
-
Tikunov, Y.1
Lommen, A.2
De Vos, C.H.R.3
Verhoeven, H.A.4
Bino, R.J.5
Hall, R.D.6
Bovy, A.G.7
-
88
-
-
77958183429
-
Characterization of FaSPT, a SPATULA gene encoding a bHLH transcriptional factor from the non-climacteric strawberry fruit
-
Tisza, V., Kovacs, L., Balogh, A., Heszky, L., and, Kiss, E., (2010) Characterization of FaSPT, a SPATULA gene encoding a bHLH transcriptional factor from the non-climacteric strawberry fruit. Plant Physiol. Biochem. 48, 822-826.
-
(2010)
Plant Physiol. Biochem.
, vol.48
, pp. 822-826
-
-
Tisza, V.1
Kovacs, L.2
Balogh, A.3
Heszky, L.4
Kiss, E.5
-
89
-
-
62549159971
-
Web-based resources for mass-spectrometry-based metabolomics: A user's guide
-
Tohge, T., and, Fernie, A.R., (2009) Web-based resources for mass-spectrometry-based metabolomics: a user's guide. Phytochemistry, 70, 450-456.
-
(2009)
Phytochemistry
, vol.70
, pp. 450-456
-
-
Tohge, T.1
Fernie, A.R.2
-
90
-
-
77954396635
-
Combining genetic diversity, informatics and metabolomics to facilitate annotation of plant gene function
-
Tohge, T., and, Fernie, A.R., (2010) Combining genetic diversity, informatics and metabolomics to facilitate annotation of plant gene function. Nat. Protoc. 5, 1210-1227.
-
(2010)
Nat. Protoc.
, vol.5
, pp. 1210-1227
-
-
Tohge, T.1
Fernie, A.R.2
-
91
-
-
17044369876
-
Functional genomics by integrated analysis of metabolome and transcriptome of Arabidopsis plants over-expressing an MYB transcription factor
-
DOI 10.1111/j.1365-313X.2005.02371.x
-
Tohge, T., Nishiyama, Y., Hirai, M.Y., et al. (2005) Functional genomics by integrated analysis of metabolome and transcriptome of Arabidopsis plants over-expressing an MYB transcription factor. Plant J. 42, 218-235. (Pubitemid 40589384)
-
(2005)
Plant Journal
, vol.42
, Issue.2
, pp. 218-235
-
-
Tohge, T.1
Nishiyama, Y.2
Hirai, M.Y.3
Yano, M.4
Nakajima, J.-I.5
Awazuhara, M.6
Inoue, E.7
Takahashi, H.8
Goodenowe, D.B.9
Kitayama, M.10
Noji, M.11
Yamazaki, M.12
Saito, K.13
-
92
-
-
33845485657
-
Developmental changes in antioxidant metabolites, enzymes, and pigments in fruit exocarp of four tomato (Lycopersicon esculentum Mill.) genotypes: β-carotene, high pigment-1, ripening inhibitor, and 'Rutgers'
-
DOI 10.1016/j.plaphy.2006.09.013, PII S0981942806001355
-
Torres, C.A., and, Andrews, P.K., (2006) Developmental changes in antioxidant metabolites, enzymes, and pigments in fruit exocarp of four tomato (Lycopersicon esculentum Mill.) genotypes: β-carotene, high pigment-1, ripening inhibitor, and 'Rutgers'. Plant Physiol. Biochem. 44, 806-818. (Pubitemid 44918333)
-
(2006)
Plant Physiology and Biochemistry
, vol.44
, Issue.11-12
, pp. 806-818
-
-
Torres, C.A.1
Andrews, P.K.2
-
93
-
-
33745422063
-
The GRAS protein SCL13 is a positive regulator of phytochrome-dependent red light signaling, but can also modulate phytochrome A responses
-
DOI 10.1007/s00438-006-0123-y
-
Torres-Galea, P., Huang, L.F., Chua, N.H., and, Bolle, C., (2006) The GRAS protein SCL13 is a positive regulator of phytochrome-dependent red light signaling, but can also modulate phytochrome A responses. Mol. Genet. Genomics, 276, 13-30. (Pubitemid 43946091)
-
(2006)
Molecular Genetics and Genomics
, vol.276
, Issue.1
, pp. 13-30
-
-
Torres-Galea, P.1
Huang, L.-F.2
Chua, N.-H.3
Bolle, C.4
-
94
-
-
0031020942
-
The mapping of phytochrome genes and photomorphogenic mutants of tomato
-
DOI 10.1007/s001220050389
-
van Tuinen, A., Cordonnier-Pratt, M.M., Pratt, L.H., Verkerk, R., Zabel, P., and, Koornneef, M., (1997) The mapping of phytochrome genes and photomorphogenic mutants of tomato. Theor. Appl. Genet. 94, 115-122. (Pubitemid 27108799)
-
(1997)
Theoretical and Applied Genetics
, vol.94
, Issue.1
, pp. 115-122
-
-
Van Tuinen, A.1
Cordonnier-Pratt, M.-M.2
Pratt, L.H.3
Verkerk, R.4
Zabel, P.5
Koornneef, M.6
-
95
-
-
57749111976
-
Eleven golden rules of quantitative RT-PCR
-
DOI 10.1105/tpc.108.061143
-
Udvardi, M.K., Czechowski, T., and, Scheible, W.R., (2008) Eleven golden rules of quantitative RT-PCR. Plant Cell, 20, 1736-1737. (Pubitemid 352844528)
-
(2008)
Plant Cell
, vol.20
, Issue.7
, pp. 1736-1737
-
-
Udvardi, M.K.1
Czechowski, T.2
Scheible, W.-R.3
-
96
-
-
33846584605
-
PageMan: An interactive ontology tool to generate, display, and annotate overview graphs for profiling experiments
-
Usadel, B., Nagel, A., Steinhauser, D., et al. (2006) PageMan: an interactive ontology tool to generate, display, and annotate overview graphs for profiling experiments. BMC Bioinformatics, 7, 535.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 535
-
-
Usadel, B.1
Nagel, A.2
Steinhauser, D.3
-
97
-
-
0037129827
-
Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes
-
Vandesompele, J., De Preter, K., Pattyn, F., Poppe, B., Van Roy, N., De Paepe, A., and, Speleman, F., (2002) Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol. 3, 12.
-
(2002)
Genome Biol.
, vol.3
, pp. 12
-
-
Vandesompele, J.1
De Preter, K.2
Pattyn, F.3
Poppe, B.4
Van Roy, N.5
De Paepe, A.6
Speleman, F.7
-
98
-
-
0036793518
-
Increasing antioxidant levels in tomatoes through modification of the flavonoid biosynthetic pathway
-
Verhoeyen, M.E., Bovy, A., Collins, G., Muir, S., Robinson, S., de Vos, C.H.R., and, Colliver, S., (2002) Increasing antioxidant levels in tomatoes through modification of the flavonoid biosynthetic pathway. J. Exp. Bot. 53, 2099-2106. (Pubitemid 35181200)
-
(2002)
Journal of Experimental Botany
, vol.53
, Issue.377
, pp. 2099-2106
-
-
Verhoeyen, M.E.1
Bovy, A.2
Collins, G.3
Muir, S.4
Robinson, S.5
De Vos, C.H.R.6
Colliver, S.7
-
99
-
-
0037066465
-
A MADS-box gene necessary for fruit ripening at the tomato ripening-inhibitor (rin) locus
-
DOI 10.1126/science.1068181
-
Vrebalov, J., Ruezinsky, D., Padmanabhan, V., White, R., Medrano, D., Drake, R., Schuch, W., and, Giovannoni, J., (2002) A MADS-box gene necessary for fruit ripening at the tomato ripening-inhibitor (Rin) locus. Science, 296, 343-346. (Pubitemid 34303688)
-
(2002)
Science
, vol.296
, Issue.5566
, pp. 343-346
-
-
Vrebalov, J.1
Ruezinsky, D.2
Padmanabhan, V.3
White, R.4
Medrano, D.5
Drake, R.6
Schuch, W.7
Giovannoni, J.8
-
100
-
-
72049107455
-
Fleshy fruit expansion and ripening are regulated by the tomato SHATTERPROOF gene TAGL1
-
Vrebalov, J., Pan, I.L., Arroyo, A.J.M., et al. (2009) Fleshy fruit expansion and ripening are regulated by the tomato SHATTERPROOF gene TAGL1. Plant Cell, 21, 3041-3062.
-
(2009)
Plant Cell
, vol.21
, pp. 3041-3062
-
-
Vrebalov, J.1
Pan, I.L.2
Arroyo, A.J.M.3
-
101
-
-
33847102623
-
White grapes arose through the mutation of two similar and adjacent regulatory genes
-
DOI 10.1111/j.1365-313X.2006.02997.x
-
Walker, A.R., Lee, E., Bogs, J., McDavid, D.A.J., Thomas, M.R., and, Robinson, S.P., (2007) White grapes arose through the mutation of two similar and adjacent regulatory genes. Plant J. 49, 772-785. (Pubitemid 46279262)
-
(2007)
Plant Journal
, vol.49
, Issue.5
, pp. 772-785
-
-
Walker, A.R.1
Lee, E.2
Bogs, J.3
McDavid, D.A.J.4
Thomas, M.R.5
Robinson, S.P.6
-
102
-
-
33644878069
-
The tomato Aux/IAA transcription factor IAA9 is involved in fruit development and leaf morphogenesis
-
Wang, H., Jones, B., Li, Z.G., Frasse, P., Delalande, C., Regad, F., Chaabouni, S., Latche, A., Pech, J.C., and, Bouzayen, M., (2005) The tomato Aux/IAA transcription factor IAA9 is involved in fruit development and leaf morphogenesis. Plant Cell, 17, 2676-2692.
-
(2005)
Plant Cell
, vol.17
, pp. 2676-2692
-
-
Wang, H.1
Jones, B.2
Li, Z.G.3
Frasse, P.4
Delalande, C.5
Regad, F.6
Chaabouni, S.7
Latche, A.8
Pech, J.C.9
Bouzayen, M.10
-
103
-
-
36849086949
-
MdERFs, two ethylene-response factors involved in apple fruit ripening
-
DOI 10.1093/jxb/erm224
-
Wang, A., Tan, D., Takahashi, A., Li, T.Z., and, Harada, T., (2007) MdERFs, two ethylene-response factors involved in apple fruit ripening. J. Exp. Bot. 58, 3743-3748. (Pubitemid 350233007)
-
(2007)
Journal of Experimental Botany
, vol.58
, Issue.13
, pp. 3743-3748
-
-
Wang, A.1
Tan, D.2
Takahashi, A.3
Zhong Li, T.4
Harada, T.5
-
104
-
-
67650107787
-
Regulatory features underlying pollination-dependent and -independent tomato fruit set revealed by transcript and primary metabolite profiling
-
Wang, H., Schauer, N., Usadel, B., Frasse, P., Zouine, M., Hernould, M., Latche, A., Pech, J.C., Fernie, A.R., and, Bouzayen, M., (2009) Regulatory features underlying pollination-dependent and -independent tomato fruit set revealed by transcript and primary metabolite profiling. Plant Cell, 21, 1428-1452.
-
(2009)
Plant Cell
, vol.21
, pp. 1428-1452
-
-
Wang, H.1
Schauer, N.2
Usadel, B.3
Frasse, P.4
Zouine, M.5
Hernould, M.6
Latche, A.7
Pech, J.C.8
Fernie, A.R.9
Bouzayen, M.10
-
105
-
-
70350571205
-
The making of a chloroplast
-
Waters, M.T., and, Langdale, J.A., (2009) The making of a chloroplast. EMBO J. 28, 2861-2873.
-
(2009)
EMBO J.
, vol.28
, pp. 2861-2873
-
-
Waters, M.T.1
Langdale, J.A.2
-
106
-
-
79954424522
-
Ectopic expression of a novel peach (Prunus persica) CBF transcription factor in apple (Malus × domestica) results in short-day induced dormancy and increased cold hardiness
-
Wisniewski, M., Norelli, J., Bassett, C., Artlip, T., and, Macarisin, D., (2011) Ectopic expression of a novel peach (Prunus persica) CBF transcription factor in apple (Malus × domestica) results in short-day induced dormancy and increased cold hardiness. Planta, 233, 971-983.
-
(2011)
Planta
, vol.233
, pp. 971-983
-
-
Wisniewski, M.1
Norelli, J.2
Bassett, C.3
Artlip, T.4
MacArisin, D.5
-
107
-
-
77953212311
-
VND-INTERACTING2, a NAC domain transcription factor, negatively regulates xylem vessel formation in Arabidopsis
-
Yamaguchi, M., Ohtani, M., Mitsuda, N., Kubo, M., Ohme-Takagi, M., Fukuda, H., and, Demura, T., (2010) VND-INTERACTING2, a NAC domain transcription factor, negatively regulates xylem vessel formation in Arabidopsis. Plant Cell, 22, 1249-1263.
-
(2010)
Plant Cell
, vol.22
, pp. 1249-1263
-
-
Yamaguchi, M.1
Ohtani, M.2
Mitsuda, N.3
Kubo, M.4
Ohme-Takagi, M.5
Fukuda, H.6
Demura, T.7
-
108
-
-
0000672617
-
Sink Metabolism in Tomato Fruit: IV
-
Yelle, S., Chetelat, R. T., Dorais, M., Deverna, J.W., and, Bennett, A.B., (1991) Sink Metabolism in Tomato Fruit: IV. Genetic and Biochemical Analysis of Sucrose Accumulation, 95, 1026-1035.
-
(1991)
Genetic and Biochemical Analysis of Sucrose Accumulation
, vol.95
, pp. 1026-1035
-
-
Yelle, S.1
Chetelat, R.T.2
Dorais, M.3
Deverna, J.W.4
Bennett, A.B.5
-
109
-
-
0030694032
-
The tomato high-pigment (hp) locus maps to chromosome 2 and influences plastome copy number and fruit quality
-
DOI 10.1007/s001220050664
-
Yen, H.C., Shelton, B.A., Howard, L.R., Lee, S., Vrebalov, J., and, Giovannoni, J.J., (1997) The tomato high-pigment (hp) locus maps to chromosome 2 and influences plastome copy number and fruit quality. Theor. Appl. Genet. 95, 1069-1079. (Pubitemid 27526369)
-
(1997)
Theoretical and Applied Genetics
, vol.95
, Issue.7
, pp. 1069-1079
-
-
Yen, H.C.1
Shelton, B.A.2
Howard, L.R.3
Lee, S.4
Vrebalov, J.5
Giovannoni, J.J.6
|