메뉴 건너뛰기




Volumn 68, Issue 6, 2011, Pages 999-1013

Combined transcription factor profiling, microarray analysis and metabolite profiling reveals the transcriptional control of metabolic shifts occurring during tomato fruit development

Author keywords

fleshy fruit ripening; metabolomics; microarray; quantitative RT PCR; Solanum lycopersicum; transcription factor

Indexed keywords

AILSA CRAIG; ARABIDOPSIS; CDNA MICROARRAY ANALYSIS; DATA SETS; EXPRESSION LEVELS; FRUIT DEVELOPMENT; FRUIT RIPENING; GENETIC CONTROL; LIGHT-SIGNAL TRANSDUCTION; METABOLIC SHIFT; METABOLITE PROFILING; METABOLOMICS; MICROARRAY ANALYSIS; NEGATIVE REGULATORS; PHENOLIC CONTENT; QUANTITATIVE REAL TIME PCR; QUANTITATIVE RT-PCR; SECONDARY METABOLITES; SOLANUM LYCOPERSICUM; TOMATO FRUITS; TRANSCRIPTIONAL CONTROL; TRANSCRIPTIONAL REGULATION; WILD TYPES;

EID: 83555173359     PISSN: 09607412     EISSN: 1365313X     Source Type: Journal    
DOI: 10.1111/j.1365-313X.2011.04750.x     Document Type: Article
Times cited : (116)

References (109)
  • 1
    • 0035160843 scopus 로고    scopus 로고
    • The strawberry FaMYB1 transcription factor suppresses anthocyanin and flavonol accumulation in transgenic tobacco
    • DOI 10.1046/j.1365-313X.2001.01154.x
    • Aharoni, A., De Vos, C.H.R., Wein, M., Sun, Z.K., Greco, R., Kroon, A., Mol, J.N.M., and, O'Connell, A.P., (2001) The strawberry FaMYB1 transcription factor suppresses anthocyanin and flavonol accumulation in transgenic tobacco. Plant J. 28, 319-332. (Pubitemid 33066396)
    • (2001) Plant Journal , vol.28 , Issue.3 , pp. 319-332
    • Aharoni, A.1    De Vos, C.H.R.2    Wein, M.3    Sun, Z.4    Greco, R.5    Kroon, A.6    Mol, J.N.M.7    O'Connell, A.P.8
  • 3
    • 33344476119 scopus 로고    scopus 로고
    • Transcriptome and selected metabolite analyses reveal multiple points of ethylene control during tomato fruit development
    • Alba, R., Payton, P., Fei, Z.J., McQuinn, R., Debbie, P., Martin, G.B., Tanksley, S.D., and, Giovannoni, J.J., (2005) Transcriptome and selected metabolite analyses reveal multiple points of ethylene control during tomato fruit development. Plant Cell, 17, 2954-2965.
    • (2005) Plant Cell , vol.17 , pp. 2954-2965
    • Alba, R.1    Payton, P.2    Fei, Z.J.3    McQuinn, R.4    Debbie, P.5    Martin, G.B.6    Tanksley, S.D.7    Giovannoni, J.J.8
  • 4
    • 33745729883 scopus 로고    scopus 로고
    • How foliar-applied nutrients affect stresses in perennial fruit plants
    • In (Tagliavini, M. Toselli, M. Bertschinger, L. Neilsen, D. and Thalheimer, M. eds). Leuven, Belgium: International Society of Horticultural Science
    • Andrews, P.K., (2002) How foliar-applied nutrients affect stresses in perennial fruit plants. In Proceedings of the International Symposium on Foliar Nutrition of Perennial Fruit Plants (, Tagliavini, M., Toselli, M., Bertschinger, L., Neilsen, D., and, Thalheimer, M., eds). Leuven, Belgium: International Society of Horticultural Science, pp. 49-55.
    • (2002) Proceedings of the International Symposium on Foliar Nutrition of Perennial Fruit Plants , pp. 49-55
    • Andrews, P.K.1
  • 5
    • 58149307466 scopus 로고    scopus 로고
    • QuantPrime - A flexible tool for reliable high-throughput primer design for quantitative PCR
    • Arvidsson, S., Kwasniewski, M., Riano-Pachon, D.M., and, Mueller-Roeber, B., (2008) QuantPrime-a flexible tool for reliable high-throughput primer design for quantitative PCR. BMC Bioinformatics, 9, 15.
    • (2008) BMC Bioinformatics , vol.9 , pp. 15
    • Arvidsson, S.1    Kwasniewski, M.2    Riano-Pachon, D.M.3    Mueller-Roeber, B.4
  • 6
    • 64749093047 scopus 로고    scopus 로고
    • Regulation of de novo fatty acid synthesis in maturing oilseeds of Arabidopsis
    • Baud, S., and, Lepiniec, L., (2009) Regulation of de novo fatty acid synthesis in maturing oilseeds of Arabidopsis. Plant Physiol. Biochem. 47, 448-455.
    • (2009) Plant Physiol. Biochem. , vol.47 , pp. 448-455
    • Baud, S.1    Lepiniec, L.2
  • 8
    • 34250651222 scopus 로고    scopus 로고
    • The grapevine transcription factor VvMYBPA1 regulates proanthocyanidin synthesis during fruit development
    • DOI 10.1104/pp.106.093203
    • Bogs, J., Jaffe, F.W., Takos, A.M., Walker, A.R., and, Robinson, S.P., (2007) The grapevine transcription factor VvMYBPA1 regulates proanthocyanidin synthesis during fruit development. Plant Physiol. 143, 1347-1361. (Pubitemid 46941551)
    • (2007) Plant Physiology , vol.143 , Issue.3 , pp. 1347-1361
    • Bogs, J.1    Jaffe, F.W.2    Takos, A.M.3    Walker, A.R.4    Robinson, S.P.5
  • 9
    • 0034657338 scopus 로고    scopus 로고
    • PAT1, a new member of the GRAS family, is involved in phytochrome A signal transduction
    • Bolle, C., Koncz, C., and, Chua, N.H., (2000) PAT1, a new member of the GRAS family, is involved in phytochrome A signal transduction. Genes Dev. 14, 1269-1278. (Pubitemid 30327507)
    • (2000) Genes and Development , vol.14 , Issue.10 , pp. 1269-1278
    • Bolle, C.1    Koncz, C.2    Chua, N.-H.3
  • 10
    • 0034489893 scopus 로고    scopus 로고
    • Activation tagging identifies a conserved MYB regulator of phenylpropanoid biosynthesis
    • DOI 10.1105/tpc.12.12.2383
    • Borevitz, J.O., Xia, Y.J., Blount, J., Dixon, R.A., and, Lamb, C., (2000) Activation tagging identifies a conserved MYB regulator of phenylpropanoid biosynthesis. Plant Cell, 12, 2383-2393. (Pubitemid 32106413)
    • (2000) Plant Cell , vol.12 , Issue.12 , pp. 2383-2393
    • Borevitz, J.O.1    Xia, Y.2    Blount, J.3    Dixon, R.A.4    Lamb, C.5
  • 13
    • 55749105106 scopus 로고    scopus 로고
    • Enrichment of tomato fruit with health-promoting anthocyanins by expression of select transcription factors
    • Butelli, E., Titta, L., Giorgio, M., et al. (2008) Enrichment of tomato fruit with health-promoting anthocyanins by expression of select transcription factors. Nat. Biotechnol. 26, 1301-1308.
    • (2008) Nat. Biotechnol. , vol.26 , pp. 1301-1308
    • Butelli, E.1    Titta, L.2    Giorgio, M.3
  • 14
    • 34547176148 scopus 로고    scopus 로고
    • A quantitative RT-PCR platform for high-throughput expression profiling of 2500 rice transcription factors
    • Caldana, C., Scheible, W.R., Mueller-Roeber, B., and, Ruzicic, S., (2007) A quantitative RT-PCR platform for high-throughput expression profiling of 2500 rice transcription factors. Plant Methods, 3, 9.
    • (2007) Plant Methods , vol.3 , pp. 9
    • Caldana, C.1    Scheible, W.R.2    Mueller-Roeber, B.3    Ruzicic, S.4
  • 16
    • 33745614596 scopus 로고    scopus 로고
    • Metabolic regulation underlying tomato fruit development
    • DOI 10.1093/jxb/erj020
    • Carrari, F., and, Fernie, A.R., (2006) Metabolic regulation underlying tomato fruit development. J. Exp. Bot. 57, 1883-1897. (Pubitemid 43992239)
    • (2006) Journal of Experimental Botany , vol.57 , Issue.9 , pp. 1883-1897
    • Carrari, F.1    Fernie, A.R.2
  • 18
    • 78650079526 scopus 로고    scopus 로고
    • A tomato (Solanum lycopersicum) APETALA2/ERF gene, SlAP2a, is a negative regulator of fruit ripening
    • Chung, M.Y., Vrebalov, J., Alba, R., Lee, J., McQuinn, R., Chung, J.D., Klein, P., and, Giovannoni, J., (2010) A tomato (Solanum lycopersicum) APETALA2/ERF gene, SlAP2a, is a negative regulator of fruit ripening. Plant J. 64, 936-947.
    • (2010) Plant J. , vol.64 , pp. 936-947
    • Chung, M.Y.1    Vrebalov, J.2    Alba, R.3    Lee, J.4    McQuinn, R.5    Chung, J.D.6    Klein, P.7    Giovannoni, J.8
  • 19
    • 0141995484 scopus 로고    scopus 로고
    • Selection of candidate housekeeping controls in tomato plants using EST data
    • Coker, J.S., and, Davies, E., (2003) Selection of candidate housekeeping controls in tomato plants using EST data. BioTechniques, 35, 740-748. (Pubitemid 37248358)
    • (2003) BioTechniques , vol.35 , Issue.4 , pp. 740-748
    • Coker, J.S.1    Davies, E.2
  • 20
    • 44349107589 scopus 로고    scopus 로고
    • Regulatory change in YABBY-like transcription factor led to evolution of extreme fruit size during tomato domestication
    • DOI 10.1038/ng.144, PII NG144
    • Cong, B., Barrero, L.S., and, Tanksley, S.D., (2008) Regulatory change in YABBY-like transcription factor led to evolution of extreme fruit size during tomato domestication. Nat. Genet. 40, 800-804. (Pubitemid 351748864)
    • (2008) Nature Genetics , vol.40 , Issue.6 , pp. 800-804
    • Cong, B.1    Barrero, L.S.2    Tanksley, S.D.3
  • 21
    • 0242286655 scopus 로고    scopus 로고
    • Increases in cell elongation, plastid compartment size and phytoene synthase activity underlie the phenotype of the high pigment-1 mutant of tomato
    • DOI 10.1007/s00425-003-1065-9
    • Cookson, P.J., Kiano, J.W., Shipton, C.A., Fraser, P.D., Romer, S., Schuch, W., Bramley, P.M., and, Pyke, K.A., (2003) Increases in cell elongation, plastid compartment size and phytoene synthase activity underlie the phenotype of the high pigment-1 mutant of tomato. Planta, 217, 896-903. (Pubitemid 37347852)
    • (2003) Planta , vol.217 , Issue.6 , pp. 896-903
    • Cookson, P.J.1    Kiano, J.W.2    Shipton, C.A.3    Fraser, P.D.4    Romer, S.5    Schuch, W.6    Bramley, P.M.7    Pyke, K.A.8
  • 22
    • 1942475192 scopus 로고    scopus 로고
    • Real-time RT-PCR profiling of over 1400 Arabidopsis transcription factors: Unprecedented sensitivity reveals novel root-and shoot-specific genes
    • DOI 10.1111/j.1365-313X.2004.02051.x
    • Czechowski, T., Bari, R.P., Stitt, M., Scheible, W.R., and, Udvardi, M.K., (2004) Real-time RT-PCR profiling of over 1400 Arabidopsis transcription factors: unprecedented sensitivity reveals novel root- and shoot-specific genes. Plant J. 38, 366-379. (Pubitemid 38503736)
    • (2004) Plant Journal , vol.38 , Issue.2 , pp. 366-379
    • Czechowski, T.1    Bari, R.P.2    Stitt, M.3    Scheible, W.-R.4    Udvardi, M.K.5
  • 23
    • 70350676670 scopus 로고    scopus 로고
    • The grapevine R2R3-MYB transcription factor VvMYBF1 regulates flavonol synthesis in developing grape berries
    • Czemmel, S., Stracke, R., Weisshaar, B., Cordon, N., Harris, N.N., Walker, A.R., Robinson, S.P., and, Bogs, J., (2009) The grapevine R2R3-MYB transcription factor VvMYBF1 regulates flavonol synthesis in developing grape berries. Plant Physiol. 151, 1513-1530.
    • (2009) Plant Physiol. , vol.151 , pp. 1513-1530
    • Czemmel, S.1    Stracke, R.2    Weisshaar, B.3    Cordon, N.4    Harris, N.N.5    Walker, A.R.6    Robinson, S.P.7    Bogs, J.8
  • 24
    • 73449141172 scopus 로고    scopus 로고
    • Identification of Solanum habrochaites loci that quantitatively influence tomato fruit ripening-associated ethylene emissions
    • Dal Cin, V., Kevany, B., Fei, Z., and, Klee, H.J., (2009) Identification of Solanum habrochaites loci that quantitatively influence tomato fruit ripening-associated ethylene emissions. Theor. Appl. Genet. 119, 1183-1192.
    • (2009) Theor. Appl. Genet. , vol.119 , pp. 1183-1192
    • Dal Cin, V.1    Kevany, B.2    Fei, Z.3    Klee, H.J.4
  • 26
    • 77953194787 scopus 로고    scopus 로고
    • Integrative transcript and metabolite analysis of nutritionally enhanced DE-ETIOLATED1 downregulated tomato fruit
    • Enfissi, E.M.A., Barneche, F., Ahmed, I., et al. (2010) Integrative transcript and metabolite analysis of nutritionally enhanced DE-ETIOLATED1 downregulated tomato fruit. Plant Cell, 22, 1190-1215.
    • (2010) Plant Cell , vol.22 , pp. 1190-1215
    • Enfissi, E.M.A.1    Barneche, F.2    Ahmed, I.3
  • 27
    • 33846404129 scopus 로고    scopus 로고
    • Red colouration in apple fruit is due to the activity of the MYB transcription factor, MdMYB10
    • DOI 10.1111/j.1365-313X.2006.02964.x
    • Espley, R.V., Hellens, R.P., Putterill, J., Stevenson, D.E., Kutty-Amma, S., and, Allan, A.C., (2007) Red colouration in apple fruit is due to the activity of the MYB transcription factor, MdMYB10. Plant J. 49, 414-427. (Pubitemid 46146623)
    • (2007) Plant Journal , vol.49 , Issue.3 , pp. 414-427
    • Espley, R.V.1    Hellens, R.P.2    Putterill, J.3    Stevenson, D.E.4    Kutty-Amma, S.5    Allan, A.C.6
  • 28
    • 58549086530 scopus 로고    scopus 로고
    • Selection of internal control genes for quantitative real-time RT-PCR studies during tomato development process
    • Exposito-Rodriguez, M., Borges, A.A., Borges-Perez, A., and, Perez, J.A., (2008) Selection of internal control genes for quantitative real-time RT-PCR studies during tomato development process. BMC Plant Biol. 8, 12.
    • (2008) BMC Plant Biol. , vol.8 , pp. 12
    • Exposito-Rodriguez, M.1    Borges, A.A.2    Borges-Perez, A.3    Perez, J.A.4
  • 29
    • 57749121318 scopus 로고    scopus 로고
    • Reconfiguration of the achene and receptacle metabolic networks during strawberry fruit development
    • DOI 10.1104/pp.108.120691
    • Fait, A., Hanhineva, K., Beleggia, R., Dai, N., Rogachev, I., Nikiforova, V.J., Fernie, A.R., and, Aharoni, A., (2008) Reconfiguration of the achene and receptacle metabolic networks during strawberry fruit development. Plant Physiol. 148, 730-750. (Pubitemid 352847532)
    • (2008) Plant Physiology , vol.148 , Issue.2 , pp. 730-750
    • Fait, A.1    Hanhineva, K.2    Beleggia, R.3    Dai, N.4    Rogachev, I.5    Nikiforova, V.J.6    Fernie, A.R.7    Aharoni, A.8
  • 31
    • 0034647914 scopus 로고    scopus 로고
    • ORCA3, a jasmonate-responsive transcriptional regulator of plant primary and secondary metabolism
    • DOI 10.1126/science.289.5477.295
    • van der Fits, L., and, Memelink, J., (2000) ORCA3, a jasmonate-responsive transcriptional regulator of plant primary and secondary metabolism. Science, 289, 295-297. (Pubitemid 30469906)
    • (2000) Science , vol.289 , Issue.5477 , pp. 295-297
    • Van Der Fits, L.1    Memelink, J.2
  • 32
    • 0032159998 scopus 로고    scopus 로고
    • Wrinkled 1: A novel, low-seed-oil mutant of arabidopsis with a deficiency in the seed-specific regulation of carbohydrate metabolism
    • Focks, N., and, Benning, C., (1998) wrinkled1: a novel, low-seed-oil mutant of Arabidopsis with a deficiency in the seed-specific regulation of carbohydrate metabolism. Plant Physiol. 118, 91-101. (Pubitemid 128652972)
    • (1998) Plant Physiology , vol.118 , Issue.1 , pp. 91-101
    • Focks, N.1    Benning, C.2
  • 33
    • 79251559717 scopus 로고    scopus 로고
    • Identification of potential target genes for the tomato fruit-ripening regulator RIN by chromatin immunoprecipitation
    • Fujisawa, M., Nakano, T., and, Ito, Y., (2011) Identification of potential target genes for the tomato fruit-ripening regulator RIN by chromatin immunoprecipitation. BMC Plant Biol. 11, 26.
    • (2011) BMC Plant Biol. , vol.11 , pp. 26
    • Fujisawa, M.1    Nakano, T.2    Ito, Y.3
  • 34
    • 39249083203 scopus 로고    scopus 로고
    • Abscisic acid deficiency in the tomato mutant high-pigment 3 leading to increased plastid number and higher fruit lycopene content
    • DOI 10.1111/j.1365-313X.2007.03362.x
    • Galpaz, N., Wang, Q., Menda, N., Zamir, D., and, Hirschberg, J., (2008) Abscisic acid deficiency in the tomato mutant high-pigment 3 leading to increased plastid number and higher fruit lycopene content. Plant J. 53, 717-730. (Pubitemid 351495861)
    • (2008) Plant Journal , vol.53 , Issue.5 , pp. 717-730
    • Galpaz, N.1    Wang, Q.2    Menda, N.3    Zamir, D.4    Hirschberg, J.5
  • 35
    • 2942690153 scopus 로고    scopus 로고
    • Genetic regulation of fruit development and ripening
    • DOI 10.1105/tpc.019158
    • Giovannoni, J.J., (2004) Genetic regulation of fruit development and ripening. Plant Cell, 16, S170-S180. (Pubitemid 38774226)
    • (2004) Plant Cell , vol.16 , Issue.SUPPL.
    • Giovannoni, J.J.1
  • 36
    • 34248213602 scopus 로고    scopus 로고
    • Fruit ripening mutants yield insights into ripening control
    • DOI 10.1016/j.pbi.2007.04.008, PII S136952660700043X, Physiology and Metabolism Edited by Clint Chapple and Malcolm M Campbell
    • Giovannoni, J.J., (2007) Fruit ripening mutants yield insights into ripening control. Curr. Opin. Plant Biol. 10, 283-289. (Pubitemid 46710481)
    • (2007) Current Opinion in Plant Biology , vol.10 , Issue.3 , pp. 283-289
    • Giovannoni, J.J.1
  • 37
    • 79957497988 scopus 로고    scopus 로고
    • Recent advances in the transcriptional regulation of the flavonoid biosynthetic pathway
    • Hichri, I., Barrieu, F., Bogs, J., Kappel, C., Delrot, S., and, Lauvergeat, V., (2011) Recent advances in the transcriptional regulation of the flavonoid biosynthetic pathway. J. Exp. Bot. 62, 2465-2483.
    • (2011) J. Exp. Bot. , vol.62 , pp. 2465-2483
    • Hichri, I.1    Barrieu, F.2    Bogs, J.3    Kappel, C.4    Delrot, S.5    Lauvergeat, V.6
  • 40
    • 0000236799 scopus 로고
    • Pleiotropic effects associated with the chlorophyll intensifier mutations high pigment and dark green in tomato
    • Jarret, R.L., Sayama, H., and, Tigchelaar, E.C., (1984) Pleiotropic effects associated with the chlorophyll intensifier mutations high pigment and dark green in tomato. J. Am. Soc. Hort. Sci. 109, 873-878.
    • (1984) J. Am. Soc. Hort. Sci. , vol.109 , pp. 873-878
    • Jarret, R.L.1    Sayama, H.2    Tigchelaar, E.C.3
  • 41
    • 0035983845 scopus 로고    scopus 로고
    • Transparent Testa Glabra2, a trichome and seed coat development gene of arabidopsis, encodes a WRKY transcription factor
    • DOI 10.1105/tpc.001404
    • Johnson, C.S., Kolevski, B., and, Smyth, D.R., (2002) TRANSPARENT TESTA GLABRA2, a trichome and seed coat development gene of Arabidopsis, encodes a WRKY transcription factor. Plant Cell, 14, 1359-1375. (Pubitemid 34780437)
    • (2002) Plant Cell , vol.14 , Issue.6 , pp. 1359-1375
    • Johnson, C.S.1    Kolevski, B.2    Smyth, D.R.3
  • 43
    • 77954587801 scopus 로고    scopus 로고
    • Improving the flavor of fresh fruits: Genomics, biochemistry, and biotechnology
    • Klee, H.J., (2010) Improving the flavor of fresh fruits: genomics, biochemistry, and biotechnology. New Phytol. 187, 44-56.
    • (2010) New Phytol. , vol.187 , pp. 44-56
    • Klee, H.J.1
  • 44
    • 0036795679 scopus 로고    scopus 로고
    • Tobacco to tomatoes: A phylogenetic perspective on fruit diversity in the Solanaceae
    • Knapp, S., (2002) Tobacco to tomatoes: a phylogenetic perspective on fruit diversity in the Solanaceae. J. Exp. Bot. 53, 2001-2022. (Pubitemid 35181192)
    • (2002) Journal of Experimental Botany , vol.53 , Issue.377 , pp. 2001-2022
    • Knapp, S.1
  • 45
    • 0033165677 scopus 로고    scopus 로고
    • ANTHOCYANINLESS2, a homeobox gene affecting anthocyanin distribution and root development in Arabidopsis
    • Kubo, H., Peeters, A.J.M., Aarts, M.G.M., Pereira, A., and, Koornneef, M., (1999) ANTHOCYANINLESS2, a homeobox gene affecting anthocyanin distribution and root development in Arabidopsis. Plant Cell, 11, 1217-1226.
    • (1999) Plant Cell , vol.11 , pp. 1217-1226
    • Kubo, H.1    Peeters, A.J.M.2    Aarts, M.G.M.3    Pereira, A.4    Koornneef, M.5
  • 46
    • 57749121934 scopus 로고    scopus 로고
    • NAC family proteins NARS1/NAC2 and NARS2/NAM in the outer integument regulate embryogenesis in arabidopsis
    • DOI 10.1105/tpc.108.060160
    • Kunieda, T., Mitsuda, N., Ohme-Takagi, M., Takeda, S., Aida, M., Tasaka, M., Kondo, M., Nishimura, M., and, Hara-Nishimura, I., (2008) NAC family proteins NARS1/NAC2 and NARS2/NAM in the outer integument regulate embryogenesis in Arabidopsis. Plant Cell, 20, 2631-2642. (Pubitemid 352844581)
    • (2008) Plant Cell , vol.20 , Issue.10 , pp. 2631-2642
    • Kunieda, T.1    Mitsuda, N.2    Ohme-Takagi, M.3    Takeda, S.4    Aida, M.5    Tasaka, M.6    Kondo, M.7    Nishimura, M.8    Hara-Nishimura, I.9
  • 48
    • 0038530961 scopus 로고    scopus 로고
    • The tomato dark green mutation is a novel allele of the tomato homolog of the DEETIOLATED1 gene
    • Levin, I., Frankel, P., Gilboa, N., Tanny, S., and, Lalazar, A., (2003) The tomato dark green mutation is a novel allele of the tomato homolog of the DEETIOLATED1 gene. Theor. Appl. Genet. 106, 454-460. (Pubitemid 36599858)
    • (2003) Theoretical and Applied Genetics , vol.106 , Issue.3 , pp. 454-460
    • Levin, I.1    Frankel, P.2    Gilboa, N.3    Tanny, S.4    Lalazar, A.5
  • 49
    • 2942752231 scopus 로고    scopus 로고
    • The tomato homolog of the gene encoding UV-damaged DNA binding protein 1 (DDB1) underlined as the gene that causes the high pigment-1 mutant phenotype
    • DOI 10.1007/s00122-004-1584-1
    • Lieberman, M., Segev, O., Gilboa, N., Lalazar, A., and, Levin, I., (2004) The tomato homolog of the gene encoding UV-damaged DNA binding protein 1 (DDB1) underlined as the gene that causes the high pigment-1 mutant phenotype. Theor. Appl. Genet. 108, 1574-1581. (Pubitemid 38791265)
    • (2004) Theoretical and Applied Genetics , vol.108 , Issue.8 , pp. 1574-1581
    • Lieberman, M.1    Segev, O.2    Gilboa, N.3    Lalazar, A.4    Levin, I.5
  • 50
    • 55249116565 scopus 로고    scopus 로고
    • A tomato HD-Zip homeobox protein, LeHB-1, plays an important role in floral organogenesis and ripening
    • Lin, Z.F., Hong, Y.G., Yin, M.G., Li, C.Y., Zhang, K., and, Grierson, D., (2008) A tomato HD-Zip homeobox protein, LeHB-1, plays an important role in floral organogenesis and ripening. Plant J. 55, 301-310.
    • (2008) Plant J. , vol.55 , pp. 301-310
    • Lin, Z.F.1    Hong, Y.G.2    Yin, M.G.3    Li, C.Y.4    Zhang, K.5    Grierson, D.6
  • 52
    • 34248580879 scopus 로고    scopus 로고
    • Gas chromatography mass spectrometry-based metabolite profiling in plants
    • Lisec, J., Schauer, N., Kopka, J., Willmitzer, L., and, Fernie, A.R., (2006) Gas chromatography mass spectrometry-based metabolite profiling in plants. Nat. Protoc. 1, 387-396.
    • (2006) Nat. Protoc. , vol.1 , pp. 387-396
    • Lisec, J.1    Schauer, N.2    Kopka, J.3    Willmitzer, L.4    Fernie, A.R.5
  • 54
    • 79951526486 scopus 로고    scopus 로고
    • Transcription factor AtMYB44 regulates induced expression of the ETHYLENE INSENSITIVE2 gene in Arabidopsis responding to a harpin protein
    • Liu, R.X., Chen, L., Jia, Z.H., Lu, B.B., Shi, H.J., Shao, W.L., and, Dong, H.S., (2011) Transcription factor AtMYB44 regulates induced expression of the ETHYLENE INSENSITIVE2 gene in Arabidopsis responding to a harpin protein. Mol. Plant-Microbe Interact. 24, 377-389.
    • (2011) Mol. Plant-Microbe Interact. , vol.24 , pp. 377-389
    • Liu, R.X.1    Chen, L.2    Jia, Z.H.3    Lu, B.B.4    Shi, H.J.5    Shao, W.L.6    Dong, H.S.7
  • 55
    • 40049092920 scopus 로고    scopus 로고
    • TagFinder for the quantitative analysis of gas chromatography - Mass spectrometry (GC-MS)-based metabolite profiling experiments
    • DOI 10.1093/bioinformatics/btn023
    • Luedemann, A., Strassburg, K., Erban, A., and, Kopka, J., (2008) TagFinder for the quantitative analysis of gas chromatography-mass spectrometry (GC-MS)-based metabolite profiling experiments. Bioinformatics, 24, 732-737. (Pubitemid 351321224)
    • (2008) Bioinformatics , vol.24 , Issue.5 , pp. 732-737
    • Luedemann, A.1    Strassburg, K.2    Erban, A.3    Kopka, J.4
  • 56
    • 33746513103 scopus 로고    scopus 로고
    • A naturally occurring epigenetic mutation in a gene encoding an SBP-box transcription factor inhibits tomato fruit ripening
    • DOI 10.1038/ng1841, PII NG1841
    • Manning, K., Tor, M., Poole, M., Hong, Y., Thompson, A.J., King, G.J., Giovannoni, J.J., and, Seymour, G.B., (2006) A naturally occurring epigenetic mutation in a gene encoding an SBP-box transcription factor inhibits tomato fruit ripening. Nat. Genet. 38, 948-952. (Pubitemid 44141665)
    • (2006) Nature Genetics , vol.38 , Issue.8 , pp. 948-952
    • Manning, K.1    Tor, M.2    Poole, M.3    Hong, Y.4    Thompson, A.J.5    King, G.J.6    Giovannoni, J.J.7    Seymour, G.B.8
  • 57
    • 77953220026 scopus 로고    scopus 로고
    • The Arabidopsis floral homeotic proteins APETALA3 and PISTILLATA negatively regulate the BANQUO genes implicated in light signaling
    • Mara, C.D., Huang, T.B., and, Irish, V.F., (2010) The Arabidopsis floral homeotic proteins APETALA3 and PISTILLATA negatively regulate the BANQUO genes implicated in light signaling. Plant Cell, 22, 690-702.
    • (2010) Plant Cell , vol.22 , pp. 690-702
    • Mara, C.D.1    Huang, T.B.2    Irish, V.F.3
  • 59
    • 66049131151 scopus 로고    scopus 로고
    • Biology and genetic engineering of fruit maturation for enhanced quality and shelf-life
    • Matas, A.J., Gapper, N.E., Chung, M.Y., Giovannoni, J.J., and, Rose, J.K.C., (2009) Biology and genetic engineering of fruit maturation for enhanced quality and shelf-life. Curr. Opin. Biotechnol. 20, 197-203.
    • (2009) Curr. Opin. Biotechnol. , vol.20 , pp. 197-203
    • Matas, A.J.1    Gapper, N.E.2    Chung, M.Y.3    Giovannoni, J.J.4    Rose, J.K.C.5
  • 60
    • 77954500670 scopus 로고    scopus 로고
    • Isolation of WDR and bHLH genes related to flavonoid synthesis in grapevine (Vitis vinifera L.)
    • Matus, J.T., Poupin, M.J., Canon, P., Bordeu, E., Alcalde, J.A., and, Arce-Johnson, P., (2010) Isolation of WDR and bHLH genes related to flavonoid synthesis in grapevine (Vitis vinifera L.). Plant Mol. Biol. 72, 607-620.
    • (2010) Plant Mol. Biol. , vol.72 , pp. 607-620
    • Matus, J.T.1    Poupin, M.J.2    Canon, P.3    Bordeu, E.4    Alcalde, J.A.5    Arce-Johnson, P.6
  • 62
    • 63549110574 scopus 로고    scopus 로고
    • Gene and metabolite regulatory network analysis of early developing fruit tissues highlights new candidate genes for the control of tomato fruit composition and development
    • Mounet, F., Moing, A., Garcia, V., et al. (2009) Gene and metabolite regulatory network analysis of early developing fruit tissues highlights new candidate genes for the control of tomato fruit composition and development. Plant Physiol. 149, 1505-1528.
    • (2009) Plant Physiol. , vol.149 , pp. 1505-1528
    • Mounet, F.1    Moing, A.2    Garcia, V.3
  • 63
    • 0033079225 scopus 로고    scopus 로고
    • Phenotype of the tomato high pigment-2 mutant is caused by a mutation in the tomato homolog of DEETIOLATED1
    • Mustilli, A.C., Fenzi, F., Ciliento, R., Alfano, F., and, Bowler, C., (1999) Phenotype of the tomato high pigment-2 mutant is caused by a mutation in the tomato homolog of DEETIOLATED1. Plant Cell, 11, 145-157.
    • (1999) Plant Cell , vol.11 , pp. 145-157
    • Mustilli, A.C.1    Fenzi, F.2    Ciliento, R.3    Alfano, F.4    Bowler, C.5
  • 64
    • 0033768615 scopus 로고    scopus 로고
    • The TT8 gene encodes a basic helix-loop-helix domain protein required for expression of DFR and BAN genes in Arabidopsis siliques
    • Nesi, N., Debeaujon, I., Jond, C., Pelletier, G., Caboche, M., and, Lepiniec, L., (2000) The TT8 gene encodes a basic helix-loop-helix domain protein required for expression of DFR and BAN genes in Arabidopsis siliques. Plant Cell, 12, 1863-1878.
    • (2000) Plant Cell , vol.12 , pp. 1863-1878
    • Nesi, N.1    Debeaujon, I.2    Jond, C.3    Pelletier, G.4    Caboche, M.5    Lepiniec, L.6
  • 65
    • 80052398971 scopus 로고    scopus 로고
    • Systems biology of tomato fruit development: Combined transcript, protein and metabolite analysis of tomato transcription factor (nor, rin) and ethylene receptor (Nr) mutants reveals novel regulatory interactions
    • Osorio, S., Alba, R., Damasceno, C.M., et al. (2011) Systems biology of tomato fruit development: combined transcript, protein and metabolite analysis of tomato transcription factor (nor, rin) and ethylene receptor (Nr) mutants reveals novel regulatory interactions. Plant Physiol. 157, 405-425.
    • (2011) Plant Physiol. , vol.157 , pp. 405-425
    • Osorio, S.1    Alba, R.2    Damasceno, C.M.3
  • 66
    • 0031416778 scopus 로고    scopus 로고
    • QTL analysis of morphological traits in a tomato recombinant inbred line population
    • Paran, I., Goldman, I., and, Zamir, D., (1997) QTL analysis of morphological traits in a tomato recombinant inbred line population. Genome, 40, 242-248. (Pubitemid 28132023)
    • (1997) Genome , vol.40 , Issue.2 , pp. 242-248
    • Paran, I.1    Goldman, I.2    Zamir, D.3
  • 68
    • 35248870127 scopus 로고    scopus 로고
    • Isolation of the three grape sub-lineages of B-class MADS-box TM6, PISTILLATA and APETALA3 genes which are differentially expressed during flower and fruit development
    • DOI 10.1016/j.gene.2007.08.005, PII S0378111907004313
    • Poupin, M.J., Federici, F., Medina, C., Matus, J.T., Timmermann, T., and, Arce-Johnson, P., (2007) Isolation of the three grape sub-lineages of B-class MADS-box TM6, PISTILLATA and APETALA3 genes which are differentially expressed during flower and fruit development. Gene, 404, 10-24. (Pubitemid 47562639)
    • (2007) Gene , vol.404 , Issue.1-2 , pp. 10-24
    • Poupin, M.J.1    Federici, F.2    Medina, C.3    Matus, J.T.4    Timmermann, T.5    Arce-Johnson, P.6
  • 69
    • 0037435395 scopus 로고    scopus 로고
    • Assumption-free analysis of quantitative real-time polymerase chain reaction (PCR) data
    • DOI 10.1016/S0304-3940(02)01423-4
    • Ramakers, C., Ruijter, J.M., Deprez, R.H.L., and, Moorman, A.F.M., (2003) Assumption-free analysis of quantitative real-time polymerase chain reaction (PCR) data. Neurosci. Lett. 339, 62-66. (Pubitemid 36263221)
    • (2003) Neuroscience Letters , vol.339 , Issue.1 , pp. 62-66
    • Ramakers, C.1    Ruijter, J.M.2    Lekanne Deprez, R.H.3    Moorman, A.F.M.4
  • 70
    • 6544223092 scopus 로고
    • Origin of the Webb Special (Black Queen) tomato
    • Reynard, G.B., (1956) Origin of the Webb Special (Black Queen) tomato. Rep. Tomato Genet. Coop. 6, 22.
    • (1956) Rep. Tomato Genet. Coop. , vol.6 , pp. 22
    • Reynard, G.B.1
  • 71
    • 0033367101 scopus 로고    scopus 로고
    • The tomato I-box binding factor LeMYBI is a member of a novel class of Myb-like proteins
    • Rose, A., Meier, I., and, Wienand, U., (1999) The tomato I-box binding factor LeMYBI is a member of a novel class of Myb-like proteins. Plant J. 20, 641-652.
    • (1999) Plant J. , vol.20 , pp. 641-652
    • Rose, A.1    Meier, I.2    Wienand, U.3
  • 72
    • 2442451528 scopus 로고    scopus 로고
    • The plot thickens: New perspectives of primary cell wall modification
    • DOI 10.1016/j.pbi.2004.03.013, PII S1369526604000457
    • Rose, J.K.C., Saladie, M., and, Catala, C., (2004) The plot thickens: new perspectives of primary cell wall modification. Curr. Opin. Plant Biol. 7, 296-301. (Pubitemid 38611050)
    • (2004) Current Opinion in Plant Biology , vol.7 , Issue.3 , pp. 296-301
    • Rose, J.K.C.1    Saladie, M.2    Catala, C.3
  • 73
    • 43549111135 scopus 로고    scopus 로고
    • Molecular aspects of Anthocyanin fruit tomato in relation to high pigment-1
    • Sapir, M., Oren-Shamir, M., Ovadia, R., et al. (2008) Molecular aspects of Anthocyanin fruit tomato in relation to high pigment-1. J. Hered. 99, 292-303.
    • (2008) J. Hered. , vol.99 , pp. 292-303
    • Sapir, M.1    Oren-Shamir, M.2    Ovadia, R.3
  • 74
    • 33845651807 scopus 로고    scopus 로고
    • Arbuscular mycorrhiza induces gene expression of the apoplastic invertase LIN6 in tomato (Lycopersicon esculentum) roots
    • DOI 10.1093/jxb/erl172
    • Schaarschmidt, S., Roitsch, T., and, Hause, B., (2006) Arbuscular mycorrhiza induces gene expression of the apoplastic invertase LIN6 in tomato (Lycopersicon esculentum) roots. J. Exp. Bot. 57, 4015-4023. (Pubitemid 44950401)
    • (2006) Journal of Experimental Botany , vol.57 , Issue.15 , pp. 4015-4023
    • Schaarschmidt, S.1    Roitsch, T.2    Hause, B.3
  • 75
    • 0031415779 scopus 로고    scopus 로고
    • Inhibition of fructokinase and sucrose synthase by cytosolic levels of fructose in young tomato fruit undergoing transient starch synthesis
    • DOI 10.1034/j.1399-3054.1997.1010417.x
    • Schaffer, A.A., and, Petreikov, M., (1997) Inhibition of fructokinase and sucrose synthase by cytosolic levels of fructose in young tomato fruit undergoing transient starch synthesis. Physiol. Plant. 101, 800-806. (Pubitemid 28065362)
    • (1997) Physiologia Plantarum , vol.101 , Issue.4 , pp. 800-806
    • Schaffer, A.A.1    Petreikov, M.2
  • 76
    • 33645746673 scopus 로고    scopus 로고
    • Comprehensive metabolic profiling and phenotyping of interspecific introgression lines for tomato improvement
    • Schauer, N., Semel, Y., Roessner, U., et al. (2006) Comprehensive metabolic profiling and phenotyping of interspecific introgression lines for tomato improvement. Nat. Biotechnol. 24, 447-454.
    • (2006) Nat. Biotechnol. , vol.24 , pp. 447-454
    • Schauer, N.1    Semel, Y.2    Roessner, U.3
  • 77
    • 0037015275 scopus 로고    scopus 로고
    • De-etiolated 1 and damaged DNA binding protein 1 interact to regulate Arabidopsis photomorphogenesis
    • DOI 10.1016/S0960-9822(02)01106-5, PII S0960982202011065
    • Schroeder, D.F., Gahrtz, M., Maxwell, B.B., Cook, R.K., Kan, J.M., Alonso, J.M., Ecker, J.R., and, Chory, J., (2002) De-etiolated 1 and damaged DNA binding protein 1 interact to regulate Arabidopsis photomorphogenesis. Curr. Biol. 12, 1462-1472. (Pubitemid 35036644)
    • (2002) Current Biology , vol.12 , Issue.17 , pp. 1462-1472
    • Schroeder, D.F.1    Gahrtz, M.2    Maxwell, B.B.3    Cook R.Kimberley4    Kan, J.M.5    Alonso, J.M.6    Ecker, J.R.7    Chory, J.8
  • 78
    • 38649140176 scopus 로고    scopus 로고
    • Genetics and epigenetics of fruit development and ripening
    • DOI 10.1016/j.pbi.2007.09.003, PII S1369526607001380
    • Seymour, G., Poole, M., Manning, K., and, King, G.J., (2008) Genetics and epigenetics of fruit development and ripening. Curr. Opin. Plant Biol. 11, 58-63. (Pubitemid 351172871)
    • (2008) Current Opinion in Plant Biology , vol.11 , Issue.1 , pp. 58-63
    • Seymour, G.1    Poole, M.2    Manning, K.3    King, G.J.4
  • 79
    • 79251518043 scopus 로고    scopus 로고
    • A SEPALLATA gene is involved in the development and ripening of strawberry (Fragaria × ananassa Duch.) fruit, a non-climacteric tissue
    • Seymour, G.B., Ryder, C.D., Cevik, V., Hammond, J.P., Popovich, A., King, G.J., Vrebalov, J., Giovannoni, J.J., and, Manning, K., (2011) A SEPALLATA gene is involved in the development and ripening of strawberry (Fragaria × ananassa Duch.) fruit, a non-climacteric tissue. J. Exp. Bot. 62, 1179-1188.
    • (2011) J. Exp. Bot. , vol.62 , pp. 1179-1188
    • Seymour, G.B.1    Ryder, C.D.2    Cevik, V.3    Hammond, J.P.4    Popovich, A.5    King, G.J.6    Vrebalov, J.7    Giovannoni, J.J.8    Manning, K.9
  • 80
    • 77951986187 scopus 로고    scopus 로고
    • A complex interplay of three R2R3 MYB transcription factors determines the profile of aliphatic glucosinolates in Arabidopsis
    • Sonderby, I.E., Burow, M., Rowe, H.C., Kliebenstein, D.J., and, Halkier, B.A., (2010) A complex interplay of three R2R3 MYB transcription factors determines the profile of aliphatic glucosinolates in Arabidopsis. Plant Physiol. 153, 348-363.
    • (2010) Plant Physiol. , vol.153 , pp. 348-363
    • Sonderby, I.E.1    Burow, M.2    Rowe, H.C.3    Kliebenstein, D.J.4    Halkier, B.A.5
  • 82
    • 34248365134 scopus 로고    scopus 로고
    • Differential regulation of closely related R2R3-MYB transcription factors controls flavonol accumulation in different parts of the Arabidopsis thaliana seedling
    • DOI 10.1111/j.1365-313X.2007.03078.x
    • Stracke, R., Ishihara, H., Barsch, G.H.A., Mehrtens, F., Niehaus, K., and, Weisshaar, B., (2007) Differential regulation of closely related R2R3-MYB transcription factors controls flavonol accumulation in different parts of the Arabidopsis thaliana seedling. Plant J. 50, 660-677. (Pubitemid 46733755)
    • (2007) Plant Journal , vol.50 , Issue.4 , pp. 660-677
    • Stracke, R.1    Ishihara, H.2    Huep, G.3    Barsch, A.4    Mehrtens, F.5    Niehaus, K.6    Weisshaar, B.7
  • 83
    • 78149380797 scopus 로고    scopus 로고
    • Analysis of PRODUCTION of FLAVONOL GLYCOSIDES-dependent flavonol glycoside accumulation in Arabidopsis thaliana plants reveals MYB11-, MYB12-and MYB111-independent flavonol glycoside accumulation
    • Stracke, R., Jahns, O., Keck, M., Tohge, T., Niehaus, K., Fernie, A.R., and, Weisshaar, B., (2010) Analysis of PRODUCTION OF FLAVONOL GLYCOSIDES-dependent flavonol glycoside accumulation in Arabidopsis thaliana plants reveals MYB11-, MYB12-and MYB111-independent flavonol glycoside accumulation. New Phytol. 188, 985-1000.
    • (2010) New Phytol. , vol.188 , pp. 985-1000
    • Stracke, R.1    Jahns, O.2    Keck, M.3    Tohge, T.4    Niehaus, K.5    Fernie, A.R.6    Weisshaar, B.7
  • 84
    • 38149142837 scopus 로고    scopus 로고
    • Getting to grips with the plant metabolic network
    • Sweetlove, L.J., Fell, D., and, Fernie, A.R., (2008) Getting to grips with the plant metabolic network. Biochem. J. 409, 27-41.
    • (2008) Biochem. J. , vol.409 , pp. 27-41
    • Sweetlove, L.J.1    Fell, D.2    Fernie, A.R.3
  • 85
    • 34547686313 scopus 로고    scopus 로고
    • On the processing of metabolic information through metabolite-gene communication networks: An approach for modelling causality
    • DOI 10.1016/j.phytochem.2007.04.017, PII S0031942207002762
    • Szymanski, J., Bielecka, M., Carrari, F., Fernie, A.R., Hoefgen, R., and, Nikiforova, V.J., (2007) On the processing of metabolic information through metabolite-gene communication networks: an approach for modelling causality. Phytochemistry, 68, 2163-2175. (Pubitemid 47211191)
    • (2007) Phytochemistry , vol.68 , Issue.16-18 , pp. 2163-2175
    • Szymanski, J.1    Bielecka, M.2    Carrari, F.3    Fernie, A.R.4    Hoefgen, R.5    Nikiforova, V.J.6
  • 86
    • 77951985425 scopus 로고    scopus 로고
    • The role of ethylene and cold temperature in the regulation of the apple POLYGALACTURONASE1 gene and fruit softening
    • Tacken, E., Ireland, H., Gunaseelan, K., et al. (2010) the role of ethylene and cold temperature in the regulation of the apple POLYGALACTURONASE1 gene and fruit softening. Plant Physiol. 153, 294-305.
    • (2010) Plant Physiol. , vol.153 , pp. 294-305
    • Tacken, E.1    Ireland, H.2    Gunaseelan, K.3
  • 87
    • 33344469496 scopus 로고    scopus 로고
    • A novel approach for nontargeted data analysis for metabolomics. Large-scale profiling of tomato fruit volatiles
    • DOI 10.1104/pp.105.068130
    • Tikunov, Y., Lommen, A., de Vos, C.H.R., Verhoeven, H.A., Bino, R.J., Hall, R.D., and, Bovy, A.G., (2005) A novel approach for nontargeted data analysis for metabolomics. Large-scale profiling of tomato fruit volatiles. Plant Physiol. 139, 1125-1137. (Pubitemid 43790853)
    • (2005) Plant Physiology , vol.139 , Issue.3 , pp. 1125-1137
    • Tikunov, Y.1    Lommen, A.2    De Vos, C.H.R.3    Verhoeven, H.A.4    Bino, R.J.5    Hall, R.D.6    Bovy, A.G.7
  • 88
    • 77958183429 scopus 로고    scopus 로고
    • Characterization of FaSPT, a SPATULA gene encoding a bHLH transcriptional factor from the non-climacteric strawberry fruit
    • Tisza, V., Kovacs, L., Balogh, A., Heszky, L., and, Kiss, E., (2010) Characterization of FaSPT, a SPATULA gene encoding a bHLH transcriptional factor from the non-climacteric strawberry fruit. Plant Physiol. Biochem. 48, 822-826.
    • (2010) Plant Physiol. Biochem. , vol.48 , pp. 822-826
    • Tisza, V.1    Kovacs, L.2    Balogh, A.3    Heszky, L.4    Kiss, E.5
  • 89
    • 62549159971 scopus 로고    scopus 로고
    • Web-based resources for mass-spectrometry-based metabolomics: A user's guide
    • Tohge, T., and, Fernie, A.R., (2009) Web-based resources for mass-spectrometry-based metabolomics: a user's guide. Phytochemistry, 70, 450-456.
    • (2009) Phytochemistry , vol.70 , pp. 450-456
    • Tohge, T.1    Fernie, A.R.2
  • 90
    • 77954396635 scopus 로고    scopus 로고
    • Combining genetic diversity, informatics and metabolomics to facilitate annotation of plant gene function
    • Tohge, T., and, Fernie, A.R., (2010) Combining genetic diversity, informatics and metabolomics to facilitate annotation of plant gene function. Nat. Protoc. 5, 1210-1227.
    • (2010) Nat. Protoc. , vol.5 , pp. 1210-1227
    • Tohge, T.1    Fernie, A.R.2
  • 92
    • 33845485657 scopus 로고    scopus 로고
    • Developmental changes in antioxidant metabolites, enzymes, and pigments in fruit exocarp of four tomato (Lycopersicon esculentum Mill.) genotypes: β-carotene, high pigment-1, ripening inhibitor, and 'Rutgers'
    • DOI 10.1016/j.plaphy.2006.09.013, PII S0981942806001355
    • Torres, C.A., and, Andrews, P.K., (2006) Developmental changes in antioxidant metabolites, enzymes, and pigments in fruit exocarp of four tomato (Lycopersicon esculentum Mill.) genotypes: β-carotene, high pigment-1, ripening inhibitor, and 'Rutgers'. Plant Physiol. Biochem. 44, 806-818. (Pubitemid 44918333)
    • (2006) Plant Physiology and Biochemistry , vol.44 , Issue.11-12 , pp. 806-818
    • Torres, C.A.1    Andrews, P.K.2
  • 93
    • 33745422063 scopus 로고    scopus 로고
    • The GRAS protein SCL13 is a positive regulator of phytochrome-dependent red light signaling, but can also modulate phytochrome A responses
    • DOI 10.1007/s00438-006-0123-y
    • Torres-Galea, P., Huang, L.F., Chua, N.H., and, Bolle, C., (2006) The GRAS protein SCL13 is a positive regulator of phytochrome-dependent red light signaling, but can also modulate phytochrome A responses. Mol. Genet. Genomics, 276, 13-30. (Pubitemid 43946091)
    • (2006) Molecular Genetics and Genomics , vol.276 , Issue.1 , pp. 13-30
    • Torres-Galea, P.1    Huang, L.-F.2    Chua, N.-H.3    Bolle, C.4
  • 95
    • 57749111976 scopus 로고    scopus 로고
    • Eleven golden rules of quantitative RT-PCR
    • DOI 10.1105/tpc.108.061143
    • Udvardi, M.K., Czechowski, T., and, Scheible, W.R., (2008) Eleven golden rules of quantitative RT-PCR. Plant Cell, 20, 1736-1737. (Pubitemid 352844528)
    • (2008) Plant Cell , vol.20 , Issue.7 , pp. 1736-1737
    • Udvardi, M.K.1    Czechowski, T.2    Scheible, W.-R.3
  • 96
    • 33846584605 scopus 로고    scopus 로고
    • PageMan: An interactive ontology tool to generate, display, and annotate overview graphs for profiling experiments
    • Usadel, B., Nagel, A., Steinhauser, D., et al. (2006) PageMan: an interactive ontology tool to generate, display, and annotate overview graphs for profiling experiments. BMC Bioinformatics, 7, 535.
    • (2006) BMC Bioinformatics , vol.7 , pp. 535
    • Usadel, B.1    Nagel, A.2    Steinhauser, D.3
  • 97
    • 0037129827 scopus 로고    scopus 로고
    • Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes
    • Vandesompele, J., De Preter, K., Pattyn, F., Poppe, B., Van Roy, N., De Paepe, A., and, Speleman, F., (2002) Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol. 3, 12.
    • (2002) Genome Biol. , vol.3 , pp. 12
    • Vandesompele, J.1    De Preter, K.2    Pattyn, F.3    Poppe, B.4    Van Roy, N.5    De Paepe, A.6    Speleman, F.7
  • 99
    • 0037066465 scopus 로고    scopus 로고
    • A MADS-box gene necessary for fruit ripening at the tomato ripening-inhibitor (rin) locus
    • DOI 10.1126/science.1068181
    • Vrebalov, J., Ruezinsky, D., Padmanabhan, V., White, R., Medrano, D., Drake, R., Schuch, W., and, Giovannoni, J., (2002) A MADS-box gene necessary for fruit ripening at the tomato ripening-inhibitor (Rin) locus. Science, 296, 343-346. (Pubitemid 34303688)
    • (2002) Science , vol.296 , Issue.5566 , pp. 343-346
    • Vrebalov, J.1    Ruezinsky, D.2    Padmanabhan, V.3    White, R.4    Medrano, D.5    Drake, R.6    Schuch, W.7    Giovannoni, J.8
  • 100
    • 72049107455 scopus 로고    scopus 로고
    • Fleshy fruit expansion and ripening are regulated by the tomato SHATTERPROOF gene TAGL1
    • Vrebalov, J., Pan, I.L., Arroyo, A.J.M., et al. (2009) Fleshy fruit expansion and ripening are regulated by the tomato SHATTERPROOF gene TAGL1. Plant Cell, 21, 3041-3062.
    • (2009) Plant Cell , vol.21 , pp. 3041-3062
    • Vrebalov, J.1    Pan, I.L.2    Arroyo, A.J.M.3
  • 101
    • 33847102623 scopus 로고    scopus 로고
    • White grapes arose through the mutation of two similar and adjacent regulatory genes
    • DOI 10.1111/j.1365-313X.2006.02997.x
    • Walker, A.R., Lee, E., Bogs, J., McDavid, D.A.J., Thomas, M.R., and, Robinson, S.P., (2007) White grapes arose through the mutation of two similar and adjacent regulatory genes. Plant J. 49, 772-785. (Pubitemid 46279262)
    • (2007) Plant Journal , vol.49 , Issue.5 , pp. 772-785
    • Walker, A.R.1    Lee, E.2    Bogs, J.3    McDavid, D.A.J.4    Thomas, M.R.5    Robinson, S.P.6
  • 103
    • 36849086949 scopus 로고    scopus 로고
    • MdERFs, two ethylene-response factors involved in apple fruit ripening
    • DOI 10.1093/jxb/erm224
    • Wang, A., Tan, D., Takahashi, A., Li, T.Z., and, Harada, T., (2007) MdERFs, two ethylene-response factors involved in apple fruit ripening. J. Exp. Bot. 58, 3743-3748. (Pubitemid 350233007)
    • (2007) Journal of Experimental Botany , vol.58 , Issue.13 , pp. 3743-3748
    • Wang, A.1    Tan, D.2    Takahashi, A.3    Zhong Li, T.4    Harada, T.5
  • 104
    • 67650107787 scopus 로고    scopus 로고
    • Regulatory features underlying pollination-dependent and -independent tomato fruit set revealed by transcript and primary metabolite profiling
    • Wang, H., Schauer, N., Usadel, B., Frasse, P., Zouine, M., Hernould, M., Latche, A., Pech, J.C., Fernie, A.R., and, Bouzayen, M., (2009) Regulatory features underlying pollination-dependent and -independent tomato fruit set revealed by transcript and primary metabolite profiling. Plant Cell, 21, 1428-1452.
    • (2009) Plant Cell , vol.21 , pp. 1428-1452
    • Wang, H.1    Schauer, N.2    Usadel, B.3    Frasse, P.4    Zouine, M.5    Hernould, M.6    Latche, A.7    Pech, J.C.8    Fernie, A.R.9    Bouzayen, M.10
  • 105
    • 70350571205 scopus 로고    scopus 로고
    • The making of a chloroplast
    • Waters, M.T., and, Langdale, J.A., (2009) The making of a chloroplast. EMBO J. 28, 2861-2873.
    • (2009) EMBO J. , vol.28 , pp. 2861-2873
    • Waters, M.T.1    Langdale, J.A.2
  • 106
    • 79954424522 scopus 로고    scopus 로고
    • Ectopic expression of a novel peach (Prunus persica) CBF transcription factor in apple (Malus × domestica) results in short-day induced dormancy and increased cold hardiness
    • Wisniewski, M., Norelli, J., Bassett, C., Artlip, T., and, Macarisin, D., (2011) Ectopic expression of a novel peach (Prunus persica) CBF transcription factor in apple (Malus × domestica) results in short-day induced dormancy and increased cold hardiness. Planta, 233, 971-983.
    • (2011) Planta , vol.233 , pp. 971-983
    • Wisniewski, M.1    Norelli, J.2    Bassett, C.3    Artlip, T.4    MacArisin, D.5
  • 107
    • 77953212311 scopus 로고    scopus 로고
    • VND-INTERACTING2, a NAC domain transcription factor, negatively regulates xylem vessel formation in Arabidopsis
    • Yamaguchi, M., Ohtani, M., Mitsuda, N., Kubo, M., Ohme-Takagi, M., Fukuda, H., and, Demura, T., (2010) VND-INTERACTING2, a NAC domain transcription factor, negatively regulates xylem vessel formation in Arabidopsis. Plant Cell, 22, 1249-1263.
    • (2010) Plant Cell , vol.22 , pp. 1249-1263
    • Yamaguchi, M.1    Ohtani, M.2    Mitsuda, N.3    Kubo, M.4    Ohme-Takagi, M.5    Fukuda, H.6    Demura, T.7
  • 109
    • 0030694032 scopus 로고    scopus 로고
    • The tomato high-pigment (hp) locus maps to chromosome 2 and influences plastome copy number and fruit quality
    • DOI 10.1007/s001220050664
    • Yen, H.C., Shelton, B.A., Howard, L.R., Lee, S., Vrebalov, J., and, Giovannoni, J.J., (1997) The tomato high-pigment (hp) locus maps to chromosome 2 and influences plastome copy number and fruit quality. Theor. Appl. Genet. 95, 1069-1079. (Pubitemid 27526369)
    • (1997) Theoretical and Applied Genetics , vol.95 , Issue.7 , pp. 1069-1079
    • Yen, H.C.1    Shelton, B.A.2    Howard, L.R.3    Lee, S.4    Vrebalov, J.5    Giovannoni, J.J.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.