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Volumn 18, Issue 53, 2014, Pages 1-167

Can rapid integrated polymerase chain reaction-based diagnostics for gastrointestinal pathogens improve routine hospital infection control practice? A diagnostic study

Author keywords

[No Author keywords available]

Indexed keywords

SMALL SUBUNIT RIBOSOMAL RNA; TRANSFER RNA;

EID: 84907368343     PISSN: 13665278     EISSN: 20464924     Source Type: Journal    
DOI: 10.3310/hta18530     Document Type: Article
Times cited : (19)

References (37)
  • 1
    • 71549153549 scopus 로고    scopus 로고
    • Department of Health., (assessed May 2014)., URL
    • Department of Health. The Health and Social Care Act 2008. URL: www. gov. uk/government/uploads/system/uploads/attachment_data/file/216227/dh_123923. pdf (assessed May 2014).
    • The Health and Social Care Act 2008
  • 2
    • 33746409728 scopus 로고    scopus 로고
    • Prospective evaluation of hospital isolation room capacity
    • Wigglesworth N, Wilcox MH. Prospective evaluation of hospital isolation room capacity. J Hosp Infect 2006; 63: 156-61. http://dx. doi. org/10. 1016/j. jhin. 2006. 02. 008.
    • (2006) J Hosp Infect , vol.63 , pp. 156-161
    • Wigglesworth, N.1    Wilcox, M.H.2
  • 3
    • 56149107841 scopus 로고    scopus 로고
    • Diagnosis of Clostridium difficile infection by toxin detection kits: A systematic review
    • Planche T, Aghaizu A, Holliman R, Riley P, Poloniecki J, Breathnach A, et al. Diagnosis of Clostridium difficile infection by toxin detection kits: a systematic review. Lancet Infect Dis 2008; 8: 777-84. http://dx. doi. org/10. 1016/S1473-3099(08)70233-0.
    • (2008) Lancet Infect Dis , vol.8 , pp. 777-784
    • Planche, T.1    Aghaizu, A.2    Holliman, R.3    Riley, P.4    Poloniecki, J.5    Breathnach, A.6
  • 4
    • 78650828068 scopus 로고    scopus 로고
    • Reference assays for Clostridium difficile infection: One or two gold standards?
    • Planche T, Wilcox M. Reference assays for Clostridium difficile infection: one or two gold standards? J Clin Pathol 2011; 64: 1-5. http://dx. doi. org/10. 1136/jcp. 2010. 080135.
    • (2011) J Clin Pathol , vol.64 , pp. 1-5
    • Planche, T.1    Wilcox, M.2
  • 5
    • 84885955622 scopus 로고    scopus 로고
    • Differences in outcome according to C. difficile detection: A multicentre study of C. difficile infection
    • Planche TD, Davies KA, Coen PG, Finney JM, Monahan IM, Morris KA, et al. Differences in outcome according to C. difficile detection: a multicentre study of C. difficile infection. Lancet Infect Dis 2013; 13: 936. http://dx. doi. org/10. 1016/S1473-3099(13)70200-7.
    • (2013) Lancet Infect Dis , vol.13 , pp. 936
    • Planche, T.D.1    Davies, K.A.2    Coen, P.G.3    Finney, J.M.4    Monahan, I.M.5    Morris, K.A.6
  • 6
    • 13744261458 scopus 로고    scopus 로고
    • Diagnostic system for rapid and sensitive differential detection of pathogens
    • Briese T, Palacios G, Kokoris M, Jabado O, Liu Z, Renwick N, et al. Diagnostic system for rapid and sensitive differential detection of pathogens. Emerg Infect Dis 2005; 1: 310-13. http://dx. doi. org/10. 3201/eid1102. 040492.
    • (2005) Emerg Infect Dis , vol.1 , pp. 310-313
    • Briese, T.1    Palacios, G.2    Kokoris, M.3    Jabado, O.4    Liu, Z.5    Renwick, N.6
  • 7
    • 33645466824 scopus 로고    scopus 로고
    • MassTag polymerase chain reaction for differential diagnosis of viral hemorrhagic fever
    • Palacios G, Briese T, Kapoor V, Jabado O, Liu Z, Venter M, et al. MassTag polymerase chain reaction for differential diagnosis of viral hemorrhagic fever. Emerg Infect Dis 2006; 12: 692-5. http://dx. doi. org/10. 3201/eid1204. 051515.
    • (2006) Emerg Infect Dis , vol.12 , pp. 692-695
    • Palacios, G.1    Briese, T.2    Kapoor, V.3    Jabado, O.4    Liu, Z.5    Venter, M.6
  • 8
    • 84855963244 scopus 로고    scopus 로고
    • Detection of diarrhoeal pathogens in human faeces using an automated, robotic platform
    • Jex AR, Stanley KK, Lo W, Littman R, Verweij JJ, Campbell BE, et al. Detection of diarrhoeal pathogens in human faeces using an automated, robotic platform. Mol Cell Probes 2012; 26: 11-15. http://dx. doi. org/10. 1016/j. mcp. 2011. 10. 004.
    • (2012) Mol Cell Probes , vol.26 , pp. 11-15
    • Jex, A.R.1    Stanley, K.K.2    Lo, W.3    Littman, R.4    Verweij, J.J.5    Campbell, B.E.6
  • 9
    • 84555188056 scopus 로고    scopus 로고
    • Simultaneous detection of six diarrhea-causing bacterial pathogens with an in-house PCR-luminex assay
    • Liu J, Gratz J, Maro A, Kumburu H, Kibiki G, Taniuchi M, et al. Simultaneous detection of six diarrhea-causing bacterial pathogens with an in-house PCR-luminex assay. J Clin Microbiol 2012; 50: 98-103. http://dx. doi. org/10. 1128/JCM. 05416-11.
    • (2012) J Clin Microbiol , vol.50 , pp. 98-103
    • Liu, J.1    Gratz, J.2    Maro, A.3    Kumburu, H.4    Kibiki, G.5    Taniuchi, M.6
  • 10
    • 84873053679 scopus 로고    scopus 로고
    • A laboratory-developed TaqMan Array Card for simultaneous detection of 19 enteropathogens
    • Liu J, Gratz J, Amour C, Kibiki G, Becker S, Janaki L, et al. A laboratory-developed TaqMan Array Card for simultaneous detection of 19 enteropathogens. J Clin Microbiol 2013; 51: 472-80. http://dx. doi. org/10. 1128/JCM. 02658-12.
    • (2013) J Clin Microbiol , vol.51 , pp. 472-480
    • Liu, J.1    Gratz, J.2    Amour, C.3    Kibiki, G.4    Becker, S.5    Janaki, L.6
  • 11
    • 79951879778 scopus 로고    scopus 로고
    • Five commercial DNA extraction systems tested and compared on a stool sample collection
    • Persson S, de Boer RF, Kooistra-Smid AM, Olsen KE. Five commercial DNA extraction systems tested and compared on a stool sample collection. Diagn Microbiol Infect Dis 2011; 69: 240-4. http://dx. doi. org/10. 1016/j. diagmicrobio. 2010. 09. 023.
    • (2011) Diagn Microbiol Infect Dis , vol.69 , pp. 240-244
    • Persson, S.1    de Boer, R.F.2    Kooistra-Smid, A.M.3    Olsen, K.E.4
  • 12
    • 36348983382 scopus 로고    scopus 로고
    • Comparative evaluation of in-house manual, and commercial semi-automated and automated DNA extraction platforms in the sample preparation of human stool specimens for a Salmonella enterica 5′-nuclease assay
    • Schuurman T, de Boer R, Patty R, Kooistra-Smid M, van Zwet A. Comparative evaluation of in-house manual, and commercial semi-automated and automated DNA extraction platforms in the sample preparation of human stool specimens for a Salmonella enterica 5′-nuclease assay. J Microbiol Methods 2007; 71: 238-45. http://dx. doi. org/10. 1016/j. mimet. 2007. 09. 003.
    • (2007) J Microbiol Methods , vol.71 , pp. 238-245
    • Schuurman, T.1    de Boer, R.2    Patty, R.3    Kooistra-Smid, M.4    van Zwet, A.5
  • 13
    • 0037388633 scopus 로고    scopus 로고
    • Broadly reactive and highly sensitive assay for Norwalk-like viruses based on real-time quantitative reverse transcription-PCR
    • Kageyama T, Kojima S, Shinohara M, Uchida K, Fukushi S, Hoshino FB, et al. Broadly reactive and highly sensitive assay for Norwalk-like viruses based on real-time quantitative reverse transcription-PCR. J Clin Microbiol 2003; 41: 1548-57. http://dx. doi. org/10. 1128/JCM. 41. 4. 1548-1557. 2003.
    • (2003) J Clin Microbiol , vol.41 , pp. 1548-1557
    • Kageyama, T.1    Kojima, S.2    Shinohara, M.3    Uchida, K.4    Fukushi, S.5    Hoshino, F.B.6
  • 14
    • 0036701645 scopus 로고    scopus 로고
    • Rational optimization of generic primers used for Norwalk-like virus detection by reverse transcriptase polymerase chain reaction
    • Vennema H, de Bruin E, Koopmans M. Rational optimization of generic primers used for Norwalk-like virus detection by reverse transcriptase polymerase chain reaction. J Clin Virol 2002; 25: 233-5. http://dx. doi. org/10. 1016/S1386-6532(02)00126-9.
    • (2002) J Clin Virol , vol.25 , pp. 233-235
    • Vennema, H.1    de Bruin, E.2    Koopmans, M.3
  • 15
    • 77953799133 scopus 로고    scopus 로고
    • A multiplex real-time polymerase chain reaction for simultaneous detection of Salmonella spp., Escherichia coli O157, and Listeria monocytogenes in meat products
    • Suo B, He Y, Tu SI, Shi X. A multiplex real-time polymerase chain reaction for simultaneous detection of Salmonella spp., Escherichia coli O157, and Listeria monocytogenes in meat products. Foodborne Pathog Dis 2010; 7: 619-28. http://dx. doi. org/10. 1089/fpd. 2009. 0430.
    • (2010) Foodborne Pathog Dis , vol.7 , pp. 619-628
    • Suo, B.1    He, Y.2    Tu, S.I.3    Shi, X.4
  • 16
    • 0033834827 scopus 로고    scopus 로고
    • Application of the 5′-nuclease PCR assay in evaluation and development of methods for quantitative detection of Campylobacter jejuni
    • Nogva HK, Bergh A, Holck A, Rudi K. Application of the 5′-nuclease PCR assay in evaluation and development of methods for quantitative detection of Campylobacter jejuni. Appl Environ Microbiol 2000; 66: 4029-36. http://dx. doi. org/10. 1128/AEM. 66. 9. 4029-4036. 2000.
    • (2000) Appl Environ Microbiol , vol.66 , pp. 4029-4036
    • Nogva, H.K.1    Bergh, A.2    Holck, A.3    Rudi, K.4
  • 18
    • 0025854378 scopus 로고
    • Detection of Escherichia coli and Shigella spp. in water by using the polymerase chain reaction and gene probes for fluid
    • Bej AK, DiCesare JL, Haff L, Atlas RM. Detection of Escherichia coli and Shigella spp. in water by using the polymerase chain reaction and gene probes for fluid. Appl Environ Microbiol 1991; 57: 1013-17.
    • (1991) Appl Environ Microbiol , vol.57 , pp. 1013-1017
    • Bej, A.K.1    DiCesare, J.L.2    Haff, L.3    Atlas, R.M.4
  • 19
    • 70249105464 scopus 로고    scopus 로고
    • Rapid real-time PCR assays for detection of Klebsiella pneumoniae with the rmpA or magA genes associated with the hypermucoviscosity phenotype: Screening of nonhuman primates
    • Hartman LJ, Selby EB, Whitehouse CA, Coyne SR, Jaissle JG, Twenhafel NA, et al. Rapid real-time PCR assays for detection of Klebsiella pneumoniae with the rmpA or magA genes associated with the hypermucoviscosity phenotype: screening of nonhuman primates. J Mol Diagn 2009; 11: 464-71. http://dx. doi. org/10. 2353/jmoldx. 2009. 080136.
    • (2009) J Mol Diagn , vol.11 , pp. 464-471
    • Hartman, L.J.1    Selby, E.B.2    Whitehouse, C.A.3    Coyne, S.R.4    Jaissle, J.G.5    Twenhafel, N.A.6
  • 21
    • 80053492519 scopus 로고    scopus 로고
    • Quantification of Clostridium difficile in antibiotic-associated-diarrhea patients
    • Naaber P, Stsepetova J, Smidt I, Ratsep M, Koljalg S, Loivukene K, et al. Quantification of Clostridium difficile in antibiotic-associated-diarrhea patients. J Clin Microbiol 2011; 49: 3656-8. http://dx. doi. org/10. 1128/JCM. 05115-11.
    • (2011) J Clin Microbiol , vol.49 , pp. 3656-3658
    • Naaber, P.1    Stsepetova, J.2    Smidt, I.3    Ratsep, M.4    Koljalg, S.5    Loivukene, K.6
  • 23
    • 78650535644 scopus 로고    scopus 로고
    • Comparison of commercial systems for extraction of nucleic acids from DNA/RNA respiratory pathogens
    • Yang G, Erdman DE, Kodani M, Kools J, Bowen MD, Fields BS. Comparison of commercial systems for extraction of nucleic acids from DNA/RNA respiratory pathogens. J Virol Methods 2011; 171: 195-9. http://dx. doi. org/10. 1016/j. jviromet. 2010. 10. 024.
    • (2011) J Virol Methods , vol.171 , pp. 195-199
    • Yang, G.1    Erdman, D.E.2    Kodani, M.3    Kools, J.4    Bowen, M.D.5    Fields, B.S.6
  • 24
    • 68849097558 scopus 로고    scopus 로고
    • New 16-plex PCR method for rapid detection of diarrheagenic Escherichia coli directly from stool samples
    • Antikainen J, Tarkka E, Haukka K, Siitonen A, Vaara M, Kirveskari J. New 16-plex PCR method for rapid detection of diarrheagenic Escherichia coli directly from stool samples. Eur J Clin Microbiol Infect Dis 2009; 28: 899-908. http://dx. doi. org/10. 1007/s10096-009-0720-x.
    • (2009) Eur J Clin Microbiol Infect Dis , vol.28 , pp. 899-908
    • Antikainen, J.1    Tarkka, E.2    Haukka, K.3    Siitonen, A.4    Vaara, M.5    Kirveskari, J.6
  • 25
    • 84907338831 scopus 로고    scopus 로고
    • (accessed May 2014)., Department of Health., Clostridium Difficile. URL
    • Department of Health. Updated Guidance on the Diagnosis and Reporting of Clostridium Difficile. URL: www. gov. uk/government/uploads/system/uploads/attachment_data/file/215135/dh_133016. pdf (accessed May 2014).
    • Updated Guidance on the Diagnosis and Reporting of
  • 27
    • 84864927300 scopus 로고    scopus 로고
    • Policy development for Clostridium difficile
    • Wilcox MH. Policy development for Clostridium difficile. J Antimicrob Chemother 2012; 67: i19-22. http://dx. doi. org/10. 1093/jac/dks203.
    • (2012) J Antimicrob Chemother , vol.67
    • Wilcox, M.H.1
  • 28
    • 84866675037 scopus 로고    scopus 로고
    • Changing epidemiology of Clostridium difficile infection following the introduction of a national ribotyping-based surveillance scheme in England
    • Wilcox MH, Shetty N, Fawley WN, Shemko M, Coen P, Birtles A, et al. Changing epidemiology of Clostridium difficile infection following the introduction of a national ribotyping-based surveillance scheme in England. Clin Infect Dis 2012; 55: 1056-63. http://dx. doi. org/10. 1093/cid/cis614.
    • (2012) Clin Infect Dis , vol.55 , pp. 1056-1063
    • Wilcox, M.H.1    Shetty, N.2    Fawley, W.N.3    Shemko, M.4    Coen, P.5    Birtles, A.6
  • 29
    • 84860348952 scopus 로고    scopus 로고
    • Clinical and economic burden of Clostridium difficile infection in Europe: A systematic review of healthcare-facilityacquired infection
    • Wiegand PN, Nathwani D, Wilcox MH, Stephens J, Shelbaya A, Haider S. Clinical and economic burden of Clostridium difficile infection in Europe: a systematic review of healthcare-facilityacquired infection. J Hosp Infect 2012; 81: 1-14. http://dx. doi. org/10. 1016/j. jhin. 2012. 02. 004.
    • (2012) J Hosp Infect , vol.81 , pp. 1-14
    • Wiegand, P.N.1    Nathwani, D.2    Wilcox, M.H.3    Stephens, J.4    Shelbaya, A.5    Haider, S.6
  • 30
    • 0029743975 scopus 로고    scopus 로고
    • Financial burden of hospital-acquired Clostridium difficile infection
    • Wilcox MH, Cunniffe JG, Trundle C, Redpath C. Financial burden of hospital-acquired Clostridium difficile infection. J Hosp Infect 1996; 34: 23-30. http://dx. doi. org/10. 1016/S0195-6701(96)90122-X.
    • (1996) J Hosp Infect , vol.34 , pp. 23-30
    • Wilcox, M.H.1    Cunniffe, J.G.2    Trundle, C.3    Redpath, C.4
  • 32
    • 22044453957 scopus 로고    scopus 로고
    • Sample size calculation should be performed for design accuracy in diagnostic test studies
    • Flahault A, Cadilhac M, Thomas G. Sample size calculation should be performed for design accuracy in diagnostic test studies. J Clin Epidemiol 2005; 58: 859-62. http://dx. doi. org/10. 1016/j. jclinepi. 2004. 12. 009.
    • (2005) J Clin Epidemiol , vol.58 , pp. 859-862
    • Flahault, A.1    Cadilhac, M.2    Thomas, G.3
  • 33
    • 0036268829 scopus 로고    scopus 로고
    • Rapid detection of Escherichia coli O157: H7 with multiplex real-time PCR assays
    • Jothikumar N, Griffiths MW. Rapid detection of Escherichia coli O157: H7 with multiplex real-time PCR assays. Appl Environ Microbiol 2002; 68: 3169-71. http://dx. doi. org/10. 1128/AEM. 68. 6. 3169-3171. 2002.
    • (2002) Appl Environ Microbiol , vol.68 , pp. 3169-3171
    • Jothikumar, N.1    Griffiths, M.W.2
  • 34
    • 0031977258 scopus 로고    scopus 로고
    • PCR for detection of Shigella spp. in mayonnaise
    • Villalobo E, Torres A. PCR for detection of Shigella spp. in mayonnaise. Appl Environ Microiol 1998; 64: 1242-45.
    • (1998) Appl Environ Microiol , vol.64 , pp. 1242-1245
    • Villalobo, E.1    Torres, A.2
  • 35
    • 1542513844 scopus 로고    scopus 로고
    • Simultaneous detection of Entamoeba histolytica, Giardia lamblia, and Cryptosporidium parvum in fecal samples using multiplex real-time PCR
    • Verweij JJ, Blangé RA, Templeton K, Schinkel J, Brienen ETA, van Rooyen MAA, et al. Simultaneous detection of Entamoeba histolytica, Giardia lamblia, and Cryptosporidium parvum in fecal samples using multiplex real-time PCR. J Clin Microbiol 2004; 43: 1220-23. http://dx. doi. org/10. 1128/JCM. 42. 3. 1220-1223. 2004.
    • (2004) J Clin Microbiol , vol.43 , pp. 1220-1223
    • Verweij, J.J.1    Blangé, R.A.2    Templeton, K.3    Schinkel, J.4    Brienen, E.T.A.5    van Rooyen, M.A.A.6
  • 36
    • 79952332227 scopus 로고    scopus 로고
    • Detection and differentiation of Cryptosporidium spp. in human clinical samples by use of real-time PCR
    • Hadfield SJ, Robinson G, Elwin K, Chalmers RM. Detection and differentiation of Cryptosporidium spp. in human clinical samples by use of real-time PCR. J Clin Microbiol 2011; 49: 918-24. http://dx. doi. org/10. 1128/JCM. 01733-10.
    • (2011) J Clin Microbiol , vol.49 , pp. 918-924
    • Hadfield, S.J.1    Robinson, G.2    Elwin, K.3    Chalmers, R.M.4
  • 37
    • 33748777426 scopus 로고    scopus 로고
    • Real-time reverse transcription-PCR for detection of rotavirus and adenovirus as causative agents of acute viral gastroenteritis in children
    • Logan C, O'Leary JJ, O'Sullival N. Real-time reverse transcription-PCR for detection of rotavirus and adenovirus as causative agents of acute viral gastroenteritis in children. J Clin Microbiol 2006; 44: 3189-95. http://dx. doi. org/10. 1128/JCM. 00915-06.
    • (2006) J Clin Microbiol , vol.44 , pp. 3189-3195
    • Logan, C.1    O'Leary, J.J.2    O'Sullival, N.3


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